BLASTX nr result
ID: Zingiber23_contig00025192
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00025192
(613 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHF20160.1| shikimate kinase, partial [Musa acuminata AAA Group] 138 1e-30
ref|XP_004976990.1| PREDICTED: shikimate kinase 3, chloroplastic... 120 4e-25
ref|XP_004965027.1| PREDICTED: shikimate kinase 2, chloroplastic... 117 3e-24
ref|XP_004965025.1| PREDICTED: shikimate kinase 2, chloroplastic... 117 3e-24
ref|XP_004965024.1| PREDICTED: shikimate kinase 2, chloroplastic... 117 3e-24
dbj|BAJ97717.1| predicted protein [Hordeum vulgare subsp. vulgare] 115 9e-24
ref|XP_006652893.1| PREDICTED: shikimate kinase 3, chloroplastic... 114 2e-23
ref|XP_003580651.1| PREDICTED: shikimate kinase, chloroplastic-l... 114 3e-23
ref|NP_001054037.2| Os04g0640600 [Oryza sativa Japonica Group] g... 112 6e-23
ref|XP_002448618.1| hypothetical protein SORBIDRAFT_06g030260 [S... 111 2e-22
ref|XP_004953920.1| PREDICTED: shikimate kinase 1, chloroplastic... 110 4e-22
ref|NP_001149678.1| shikimate kinase [Zea mays] gi|194700058|gb|... 110 4e-22
gb|AFW73447.1| shikimate kinase [Zea mays] 109 5e-22
gb|AFW73446.1| hypothetical protein ZEAMMB73_578634 [Zea mays] 109 5e-22
gb|EEE57809.1| hypothetical protein OsJ_08387 [Oryza sativa Japo... 109 5e-22
ref|NP_001152400.1| shikimate kinase [Zea mays] gi|195655879|gb|... 109 5e-22
gb|EAY87535.1| hypothetical protein OsI_08943 [Oryza sativa Indi... 109 5e-22
ref|NP_001048125.1| Os02g0749300 [Oryza sativa Japonica Group] g... 109 5e-22
sp|Q5NTH4.1|SK1_ORYSJ RecName: Full=Shikimate kinase 1, chloropl... 109 5e-22
ref|XP_003570645.1| PREDICTED: shikimate kinase, chloroplastic-l... 109 7e-22
>gb|AHF20160.1| shikimate kinase, partial [Musa acuminata AAA Group]
Length = 204
Score = 138 bits (348), Expect = 1e-30
Identities = 69/107 (64%), Positives = 83/107 (77%)
Frame = +3
Query: 291 RLTEGFFEQGRVPAISFRRREKLDASIRSGRAELKISCCFKKNSGSERFHHSVDAALILK 470
RL+ E+ +V + F + ASIR+G AE I CC KK SGSE FH+S D AL+LK
Sbjct: 2 RLSNRCLEERKVAMVRFGDPRRSGASIRTGHAERNIFCCHKKPSGSENFHNSFDEALVLK 61
Query: 471 KRSEDVLPYLNGRCIYLVGMMGSGKSTVGKILSEVLGYSFFDSDKLV 611
++SE+VLPY++GRCIYLVGMMGSGKSTVGKIL+EVL YSFFDSDKLV
Sbjct: 62 RKSEEVLPYMSGRCIYLVGMMGSGKSTVGKILAEVLRYSFFDSDKLV 108
>ref|XP_004976990.1| PREDICTED: shikimate kinase 3, chloroplastic-like [Setaria italica]
Length = 297
Score = 120 bits (300), Expect = 4e-25
Identities = 69/133 (51%), Positives = 88/133 (66%), Gaps = 20/133 (15%)
Frame = +3
Query: 273 GSGGSLRLTEGFFEQ-------GRVPAISFRRREKLDASIRSGR-------------AEL 392
G G R+ G E+ R PA+ F EKL + G A+L
Sbjct: 6 GIGARPRIWAGLVEKPHGGAYSARAPALRFTA-EKLPQRLVLGTDPWRGTDPGLIRAAKL 64
Query: 393 KISCCFKKNSGSERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMGSGKSTVGKILSE 572
K SCC KK++G+E+ H+S D ALIL+++++DVLPYL+GRC+YLVGMMGSGK+TVGKIL+E
Sbjct: 65 KASCC-KKSAGTEKVHYSADEALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKILAE 123
Query: 573 VLGYSFFDSDKLV 611
VLGYSFFDSDKLV
Sbjct: 124 VLGYSFFDSDKLV 136
>ref|XP_004965027.1| PREDICTED: shikimate kinase 2, chloroplastic-like isoform X4
[Setaria italica]
Length = 310
Score = 117 bits (292), Expect = 3e-24
Identities = 66/122 (54%), Positives = 80/122 (65%)
Frame = +3
Query: 246 CSFVGLDKTGSGGSLRLTEGFFEQGRVPAISFRRREKLDASIRSGRAELKISCCFKKNSG 425
C F+G +K GSLR+ G A++ R R G + CC + + G
Sbjct: 28 CLFLGREKQARAGSLRVGGG---TAGASAVAVRAR---------GTKPVAPLCCVRASRG 75
Query: 426 SERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMGSGKSTVGKILSEVLGYSFFDSDK 605
+E H+SVD AL+LK+ SE VL +LNGRCIYLVGMMGSGKSTVGKIL+EVLGYSFFDSDK
Sbjct: 76 NESSHNSVDEALLLKRISEKVLFHLNGRCIYLVGMMGSGKSTVGKILAEVLGYSFFDSDK 135
Query: 606 LV 611
LV
Sbjct: 136 LV 137
>ref|XP_004965025.1| PREDICTED: shikimate kinase 2, chloroplastic-like isoform X2
[Setaria italica]
Length = 340
Score = 117 bits (292), Expect = 3e-24
Identities = 66/122 (54%), Positives = 80/122 (65%)
Frame = +3
Query: 246 CSFVGLDKTGSGGSLRLTEGFFEQGRVPAISFRRREKLDASIRSGRAELKISCCFKKNSG 425
C F+G +K GSLR+ G A++ R R G + CC + + G
Sbjct: 28 CLFLGREKQARAGSLRVGGG---TAGASAVAVRAR---------GTKPVAPLCCVRASRG 75
Query: 426 SERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMGSGKSTVGKILSEVLGYSFFDSDK 605
+E H+SVD AL+LK+ SE VL +LNGRCIYLVGMMGSGKSTVGKIL+EVLGYSFFDSDK
Sbjct: 76 NESSHNSVDEALLLKRISEKVLFHLNGRCIYLVGMMGSGKSTVGKILAEVLGYSFFDSDK 135
Query: 606 LV 611
LV
Sbjct: 136 LV 137
>ref|XP_004965024.1| PREDICTED: shikimate kinase 2, chloroplastic-like isoform X1
[Setaria italica]
Length = 340
Score = 117 bits (292), Expect = 3e-24
Identities = 66/122 (54%), Positives = 80/122 (65%)
Frame = +3
Query: 246 CSFVGLDKTGSGGSLRLTEGFFEQGRVPAISFRRREKLDASIRSGRAELKISCCFKKNSG 425
C F+G +K GSLR+ G A++ R R G + CC + + G
Sbjct: 28 CLFLGREKQARAGSLRVGGG---TAGASAVAVRAR---------GTKPVAPLCCVRASRG 75
Query: 426 SERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMGSGKSTVGKILSEVLGYSFFDSDK 605
+E H+SVD AL+LK+ SE VL +LNGRCIYLVGMMGSGKSTVGKIL+EVLGYSFFDSDK
Sbjct: 76 NESSHNSVDEALLLKRISEKVLFHLNGRCIYLVGMMGSGKSTVGKILAEVLGYSFFDSDK 135
Query: 606 LV 611
LV
Sbjct: 136 LV 137
>dbj|BAJ97717.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 301
Score = 115 bits (288), Expect = 9e-24
Identities = 55/79 (69%), Positives = 68/79 (86%), Gaps = 1/79 (1%)
Frame = +3
Query: 378 GRAELKISCCFKK-NSGSERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMGSGKSTV 554
G A LK CC K ++G+E+ H+S D AL+LK+++EDVLPYLN RC+YLVGMMGSGK+TV
Sbjct: 62 GAARLKGLCCQKSADAGTEKVHYSADEALVLKQKAEDVLPYLNDRCVYLVGMMGSGKTTV 121
Query: 555 GKILSEVLGYSFFDSDKLV 611
GKI++EVLGYSFFDSDKLV
Sbjct: 122 GKIIAEVLGYSFFDSDKLV 140
>ref|XP_006652893.1| PREDICTED: shikimate kinase 3, chloroplastic-like [Oryza
brachyantha]
Length = 287
Score = 114 bits (286), Expect = 2e-23
Identities = 56/85 (65%), Positives = 71/85 (83%)
Frame = +3
Query: 357 LDASIRSGRAELKISCCFKKNSGSERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMG 536
L + RS A LK+SC +K +G E+ ++S D ALILK+++EDV+PYLN RC+YLVGMMG
Sbjct: 43 LGSDCRSHGARLKVSCS-RKPAGIEKVYYSADEALILKQKAEDVIPYLNDRCVYLVGMMG 101
Query: 537 SGKSTVGKILSEVLGYSFFDSDKLV 611
SGK+TVGKIL+EVLGYSFFDSDK+V
Sbjct: 102 SGKTTVGKILAEVLGYSFFDSDKMV 126
>ref|XP_003580651.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 298
Score = 114 bits (284), Expect = 3e-23
Identities = 62/114 (54%), Positives = 78/114 (68%), Gaps = 11/114 (9%)
Frame = +3
Query: 303 GFFEQGRVPA-ISFRRREKLDASIRSGR----------AELKISCCFKKNSGSERFHHSV 449
G F GRVPA ++ + + + SG A K CC K +G+E+ H+S
Sbjct: 24 GAFFSGRVPASLTSEKPAQRPLVLGSGTPMRSMEPVRGARFKGLCCKKSAAGTEKVHYSA 83
Query: 450 DAALILKKRSEDVLPYLNGRCIYLVGMMGSGKSTVGKILSEVLGYSFFDSDKLV 611
D ALILK+++EDVLP LN RC+YLVGMMGSGK+TVGKI++EVLGYSFFDSDKLV
Sbjct: 84 DEALILKQKAEDVLPCLNDRCVYLVGMMGSGKTTVGKIIAEVLGYSFFDSDKLV 137
>ref|NP_001054037.2| Os04g0640600 [Oryza sativa Japonica Group]
gi|75140480|sp|Q7X7H9.2|SK3_ORYSJ RecName:
Full=Shikimate kinase 3, chloroplastic; Short=OsSK3;
Flags: Precursor gi|38344899|emb|CAE02970.2|
OSJNBb0079B02.2 [Oryza sativa Japonica Group]
gi|56805581|dbj|BAD83414.1| shikimate kinase 3 [Oryza
sativa Japonica Group] gi|116310881|emb|CAH67822.1|
OSIGBa0138H21-OSIGBa0138E01.13 [Oryza sativa Indica
Group] gi|222629650|gb|EEE61782.1| hypothetical protein
OsJ_16353 [Oryza sativa Japonica Group]
gi|255675822|dbj|BAF15951.2| Os04g0640600 [Oryza sativa
Japonica Group]
Length = 287
Score = 112 bits (281), Expect = 6e-23
Identities = 56/85 (65%), Positives = 72/85 (84%)
Frame = +3
Query: 357 LDASIRSGRAELKISCCFKKNSGSERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMG 536
L + RS A+LK+SC +K +G ++ ++S D AL+LK+++EDV+PYLN RCIYLVGMMG
Sbjct: 43 LGSDRRSCGAKLKVSCS-RKPAGIDKTYYSADEALVLKQKAEDVVPYLNDRCIYLVGMMG 101
Query: 537 SGKSTVGKILSEVLGYSFFDSDKLV 611
SGK+TVGKIL+EVLGYSFFDSDKLV
Sbjct: 102 SGKTTVGKILAEVLGYSFFDSDKLV 126
>ref|XP_002448618.1| hypothetical protein SORBIDRAFT_06g030260 [Sorghum bicolor]
gi|241939801|gb|EES12946.1| hypothetical protein
SORBIDRAFT_06g030260 [Sorghum bicolor]
Length = 300
Score = 111 bits (277), Expect = 2e-22
Identities = 52/76 (68%), Positives = 69/76 (90%)
Frame = +3
Query: 384 AELKISCCFKKNSGSERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMGSGKSTVGKI 563
A+L++SC K++G+ + H+S D ALIL+++++DVLPYL+GRC+YLVGMMGSGK+TVGKI
Sbjct: 65 AKLRVSCS-AKSAGTGKVHYSTDEALILQQKAQDVLPYLDGRCVYLVGMMGSGKTTVGKI 123
Query: 564 LSEVLGYSFFDSDKLV 611
L+EVLGYSFFDSDKLV
Sbjct: 124 LAEVLGYSFFDSDKLV 139
>ref|XP_004953920.1| PREDICTED: shikimate kinase 1, chloroplastic-like [Setaria italica]
Length = 303
Score = 110 bits (274), Expect = 4e-22
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +3
Query: 411 KKNSGSERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMGSGKSTVGKILSEVLGYSF 590
K + G E H+SVD AL+LK++SE+VL YLNGRCIYLVGMMGSGKSTVGKI+SEVLGYSF
Sbjct: 60 KSSGGHENLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSF 119
Query: 591 FDSDKLV 611
FDSDKLV
Sbjct: 120 FDSDKLV 126
>ref|NP_001149678.1| shikimate kinase [Zea mays] gi|194700058|gb|ACF84113.1| unknown
[Zea mays] gi|194700758|gb|ACF84463.1| unknown [Zea
mays] gi|195629356|gb|ACG36319.1| shikimate kinase [Zea
mays] gi|413924549|gb|AFW64481.1| Shikimate kinase [Zea
mays]
Length = 303
Score = 110 bits (274), Expect = 4e-22
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +3
Query: 411 KKNSGSERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMGSGKSTVGKILSEVLGYSF 590
K + G E H+SVD AL+LK++SE+VL YLNGRCIYLVGMMGSGKSTVGKI+SEVLGYSF
Sbjct: 60 KSSGGHENLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSF 119
Query: 591 FDSDKLV 611
FDSDKLV
Sbjct: 120 FDSDKLV 126
>gb|AFW73447.1| shikimate kinase [Zea mays]
Length = 305
Score = 109 bits (273), Expect = 5e-22
Identities = 59/95 (62%), Positives = 70/95 (73%)
Frame = +3
Query: 327 PAISFRRREKLDASIRSGRAELKISCCFKKNSGSERFHHSVDAALILKKRSEDVLPYLNG 506
PA++ R R + RA+ K + G E H+SVD AL+LK++SE+VL YLNG
Sbjct: 41 PAVAVRARGSKPVAPLRLRAK-------KSSGGHENSHNSVDEALLLKRKSEEVLFYLNG 93
Query: 507 RCIYLVGMMGSGKSTVGKILSEVLGYSFFDSDKLV 611
RCIYLVGMMGSGKSTVGKI+SEVLGYSFFDSDKLV
Sbjct: 94 RCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLV 128
>gb|AFW73446.1| hypothetical protein ZEAMMB73_578634 [Zea mays]
Length = 257
Score = 109 bits (273), Expect = 5e-22
Identities = 59/95 (62%), Positives = 70/95 (73%)
Frame = +3
Query: 327 PAISFRRREKLDASIRSGRAELKISCCFKKNSGSERFHHSVDAALILKKRSEDVLPYLNG 506
PA++ R R + RA+ K + G E H+SVD AL+LK++SE+VL YLNG
Sbjct: 41 PAVAVRARGSKPVAPLRLRAK-------KSSGGHENSHNSVDEALLLKRKSEEVLFYLNG 93
Query: 507 RCIYLVGMMGSGKSTVGKILSEVLGYSFFDSDKLV 611
RCIYLVGMMGSGKSTVGKI+SEVLGYSFFDSDKLV
Sbjct: 94 RCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLV 128
>gb|EEE57809.1| hypothetical protein OsJ_08387 [Oryza sativa Japonica Group]
Length = 464
Score = 109 bits (273), Expect = 5e-22
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +3
Query: 411 KKNSGSERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMGSGKSTVGKILSEVLGYSF 590
K + G E H+SVD AL+LK++SE+VL YLNGRCIYLVGMMGSGKSTVGKI+SEVLGYSF
Sbjct: 65 KSSGGHETLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSF 124
Query: 591 FDSDKLV 611
FDSDKLV
Sbjct: 125 FDSDKLV 131
>ref|NP_001152400.1| shikimate kinase [Zea mays] gi|195655879|gb|ACG47407.1| shikimate
kinase [Zea mays]
Length = 307
Score = 109 bits (273), Expect = 5e-22
Identities = 59/95 (62%), Positives = 70/95 (73%)
Frame = +3
Query: 327 PAISFRRREKLDASIRSGRAELKISCCFKKNSGSERFHHSVDAALILKKRSEDVLPYLNG 506
PA++ R R + RA+ K + G E H+SVD AL+LK++SE+VL YLNG
Sbjct: 43 PAVAVRARGSKPVAPLRLRAK-------KSSGGHENSHNSVDEALLLKRKSEEVLFYLNG 95
Query: 507 RCIYLVGMMGSGKSTVGKILSEVLGYSFFDSDKLV 611
RCIYLVGMMGSGKSTVGKI+SEVLGYSFFDSDKLV
Sbjct: 96 RCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLV 130
>gb|EAY87535.1| hypothetical protein OsI_08943 [Oryza sativa Indica Group]
Length = 401
Score = 109 bits (273), Expect = 5e-22
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +3
Query: 411 KKNSGSERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMGSGKSTVGKILSEVLGYSF 590
K + G E H+SVD AL+LK++SE+VL YLNGRCIYLVGMMGSGKSTVGKI+SEVLGYSF
Sbjct: 65 KSSGGHETLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSF 124
Query: 591 FDSDKLV 611
FDSDKLV
Sbjct: 125 FDSDKLV 131
>ref|NP_001048125.1| Os02g0749300 [Oryza sativa Japonica Group]
gi|113537656|dbj|BAF10039.1| Os02g0749300 [Oryza sativa
Japonica Group]
Length = 195
Score = 109 bits (273), Expect = 5e-22
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +3
Query: 411 KKNSGSERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMGSGKSTVGKILSEVLGYSF 590
K + G E H+SVD AL+LK++SE+VL YLNGRCIYLVGMMGSGKSTVGKI+SEVLGYSF
Sbjct: 65 KSSGGHETLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSF 124
Query: 591 FDSDKLV 611
FDSDKLV
Sbjct: 125 FDSDKLV 131
>sp|Q5NTH4.1|SK1_ORYSJ RecName: Full=Shikimate kinase 1, chloroplastic; Short=OsSK1;
Flags: Precursor gi|56805577|dbj|BAD83412.1| shikimate
kinase 1 [Oryza sativa Japonica Group]
Length = 308
Score = 109 bits (273), Expect = 5e-22
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +3
Query: 411 KKNSGSERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMGSGKSTVGKILSEVLGYSF 590
K + G E H+SVD AL+LK++SE+VL YLNGRCIYLVGMMGSGKSTVGKI+SEVLGYSF
Sbjct: 65 KSSGGHETLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSF 124
Query: 591 FDSDKLV 611
FDSDKLV
Sbjct: 125 FDSDKLV 131
>ref|XP_003570645.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 305
Score = 109 bits (272), Expect = 7e-22
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +3
Query: 411 KKNSGSERFHHSVDAALILKKRSEDVLPYLNGRCIYLVGMMGSGKSTVGKILSEVLGYSF 590
K + G E H+SVD AL+LK++SEDVL +LNGRCIYLVGMMGSGKSTVGKIL+EVLGYSF
Sbjct: 66 KSSGGHENLHNSVDEALLLKRKSEDVLFHLNGRCIYLVGMMGSGKSTVGKILAEVLGYSF 125
Query: 591 FDSDKLV 611
FDSDKLV
Sbjct: 126 FDSDKLV 132