BLASTX nr result

ID: Zingiber23_contig00025100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00025100
         (236 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268494.2| PREDICTED: zinc finger protein VAR3, chlorop...    57   2e-06
emb|CBI31208.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_002268494.2| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Vitis
           vinifera]
          Length = 879

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/78 (41%), Positives = 44/78 (56%)
 Frame = -2

Query: 235 TVDIMRYLVSFACNIHATSDANSLRNRDLVCGSTRTLSAELVNLVVNGPGFGLNEAVHGH 56
           TVD+MR+L+S+A N   +S  N   NR+LV  S R L  EL  +    P   L+ +V  H
Sbjct: 194 TVDLMRFLLSYASNPTNSSGRNDSYNRELVESSVRNLLNELAEMSCRVPASDLSGSVQKH 253

Query: 55  NVMGHDQFPRPTGQNVQM 2
               + Q PRP GQN++M
Sbjct: 254 FSDRYGQTPRPLGQNIEM 271


>emb|CBI31208.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/78 (41%), Positives = 44/78 (56%)
 Frame = -2

Query: 235 TVDIMRYLVSFACNIHATSDANSLRNRDLVCGSTRTLSAELVNLVVNGPGFGLNEAVHGH 56
           TVD+MR+L+S+A N   +S  N   NR+LV  S R L  EL  +    P   L+ +V  H
Sbjct: 194 TVDLMRFLLSYASNPTNSSGRNDSYNRELVESSVRNLLNELAEMSCRVPASDLSGSVQKH 253

Query: 55  NVMGHDQFPRPTGQNVQM 2
               + Q PRP GQN++M
Sbjct: 254 FSDRYGQTPRPLGQNIEM 271


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