BLASTX nr result
ID: Zingiber23_contig00025012
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00025012
(209 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT07357.1| H/ACA ribonucleoprotein complex subunit 4 [Aegilo... 75 1e-11
gb|EMS59226.1| H/ACA ribonucleoprotein complex subunit 4 [Tritic... 75 1e-11
ref|XP_003569731.1| PREDICTED: H/ACA ribonucleoprotein complex s... 74 2e-11
ref|XP_006650126.1| PREDICTED: H/ACA ribonucleoprotein complex s... 74 3e-11
dbj|BAJ93106.1| predicted protein [Hordeum vulgare subsp. vulgare] 74 3e-11
gb|EEC75340.1| hypothetical protein OsI_11751 [Oryza sativa Indi... 74 3e-11
gb|EAZ27071.1| hypothetical protein OsJ_11000 [Oryza sativa Japo... 74 3e-11
ref|NP_001050199.1| Os03g0370500 [Oryza sativa Japonica Group] g... 74 3e-11
ref|XP_004967825.1| PREDICTED: H/ACA ribonucleoprotein complex s... 73 4e-11
ref|XP_004958447.1| PREDICTED: H/ACA ribonucleoprotein complex s... 73 4e-11
gb|EMT10702.1| H/ACA ribonucleoprotein complex subunit 4 [Aegilo... 73 4e-11
tpg|DAA63804.1| TPA: hypothetical protein ZEAMMB73_356063 [Zea m... 73 4e-11
tpg|DAA53986.1| TPA: hypothetical protein ZEAMMB73_001838 [Zea m... 73 4e-11
ref|XP_003578695.1| PREDICTED: H/ACA ribonucleoprotein complex s... 72 6e-11
ref|XP_003531534.2| PREDICTED: H/ACA ribonucleoprotein complex s... 72 8e-11
dbj|BAJ87890.1| predicted protein [Hordeum vulgare subsp. vulgare] 71 1e-10
ref|XP_002457587.1| hypothetical protein SORBIDRAFT_03g009870 [S... 71 1e-10
ref|NP_001183905.1| hypothetical protein [Zea mays] gi|238015364... 71 1e-10
gb|ESW20376.1| hypothetical protein PHAVU_006G203800g [Phaseolus... 70 2e-10
ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex s... 70 2e-10
>gb|EMT07357.1| H/ACA ribonucleoprotein complex subunit 4 [Aegilops tauschii]
Length = 572
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK EKTPAEW RNVVLP GGD+M+ASLAAAPEPE
Sbjct: 378 LLDKHGKPTEKTPAEWLRNVVLPTGGDAMIASLAAAPEPE 417
>gb|EMS59226.1| H/ACA ribonucleoprotein complex subunit 4 [Triticum urartu]
Length = 519
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK EKTPAEW RNVVLP GGD+M+ASLAAAPEPE
Sbjct: 325 LLDKHGKPTEKTPAEWLRNVVLPTGGDAMIASLAAAPEPE 364
>ref|XP_003569731.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
[Brachypodium distachyon]
Length = 591
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK EKTPAEW RNVVLP GGD+M+AS+AAAPEPE
Sbjct: 412 LLDKHGKPTEKTPAEWLRNVVLPTGGDAMIASIAAAPEPE 451
>ref|XP_006650126.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Oryza
brachyantha]
Length = 596
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/40 (80%), Positives = 37/40 (92%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK NEKTP+EW RNVVLP+GGD+M+AS+AA PEPE
Sbjct: 417 LLDKHGKPNEKTPSEWIRNVVLPSGGDAMIASIAATPEPE 456
>dbj|BAJ93106.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 605
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK +KTPAEW RNVVLP GGD+M+ASLAAAPEPE
Sbjct: 410 LLDKHGKPTDKTPAEWLRNVVLPTGGDAMIASLAAAPEPE 449
>gb|EEC75340.1| hypothetical protein OsI_11751 [Oryza sativa Indica Group]
Length = 535
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK NEKTP+EW RN VLPAGGD+M+A +AAAPEPE
Sbjct: 398 LLDKHGKPNEKTPSEWLRNAVLPAGGDAMIAGIAAAPEPE 437
>gb|EAZ27071.1| hypothetical protein OsJ_11000 [Oryza sativa Japonica Group]
Length = 593
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK NEKTP+EW RN VLPAGGD+M+A +AAAPEPE
Sbjct: 417 LLDKHGKPNEKTPSEWLRNAVLPAGGDAMIAGIAAAPEPE 456
>ref|NP_001050199.1| Os03g0370500 [Oryza sativa Japonica Group]
gi|12039350|gb|AAG46137.1|AC082644_19 putative
centromere/microtubule binding protein [Oryza sativa
Japonica Group] gi|108708379|gb|ABF96174.1| H/ACA
ribonucleoprotein complex subunit 4, putative, expressed
[Oryza sativa Japonica Group]
gi|113548670|dbj|BAF12113.1| Os03g0370500 [Oryza sativa
Japonica Group] gi|215693252|dbj|BAG88634.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 591
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK NEKTP+EW RN VLPAGGD+M+A +AAAPEPE
Sbjct: 415 LLDKHGKPNEKTPSEWLRNAVLPAGGDAMIAGIAAAPEPE 454
>ref|XP_004967825.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Setaria
italica]
Length = 585
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK NEKTPAEW RNVVLP GGD +AS+AAAPEPE
Sbjct: 411 LLDKHGKPNEKTPAEWLRNVVLPTGGDVAIASIAAAPEPE 450
>ref|XP_004958447.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Setaria
italica]
Length = 581
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK NEKTPAEW RNVVLP GGD +AS+AAAPEPE
Sbjct: 408 LLDKHGKPNEKTPAEWLRNVVLPTGGDVSIASIAAAPEPE 447
>gb|EMT10702.1| H/ACA ribonucleoprotein complex subunit 4 [Aegilops tauschii]
Length = 599
Score = 72.8 bits (177), Expect = 4e-11
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK +KTPAEW RNVVLP GGD+M+AS+AAAPEPE
Sbjct: 429 LLDKHGKPTDKTPAEWLRNVVLPTGGDAMIASIAAAPEPE 468
>tpg|DAA63804.1| TPA: hypothetical protein ZEAMMB73_356063 [Zea mays]
Length = 575
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK NEKTPAEW RNVVLP GGD +AS+AAAPEPE
Sbjct: 407 LLDKHGKPNEKTPAEWLRNVVLPTGGDVSIASIAAAPEPE 446
>tpg|DAA53986.1| TPA: hypothetical protein ZEAMMB73_001838 [Zea mays]
Length = 579
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK NEKTPAEW RNVVLP GGD +AS+AAAPEPE
Sbjct: 408 LLDKHGKPNEKTPAEWLRNVVLPTGGDVSIASIAAAPEPE 447
>ref|XP_003578695.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
[Brachypodium distachyon]
Length = 584
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK EKTPAEW RNV LP GGD+M+AS+AAAPEPE
Sbjct: 412 LLDKHGKPTEKTPAEWLRNVALPTGGDAMIASIAAAPEPE 451
>ref|XP_003531534.2| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
max]
Length = 580
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = -2
Query: 205 LDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LDKHGK NEKTP EW RN+VLP GGDSM+A LAAAPEPE
Sbjct: 387 LDKHGKPNEKTPQEWLRNLVLPTGGDSMIAGLAAAPEPE 425
>dbj|BAJ87890.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 605
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK +K PAEW RNVVLP GGD+M+ASLAAAPEPE
Sbjct: 410 LLDKHGKPTDKMPAEWLRNVVLPTGGDAMIASLAAAPEPE 449
>ref|XP_002457587.1| hypothetical protein SORBIDRAFT_03g009870 [Sorghum bicolor]
gi|241929562|gb|EES02707.1| hypothetical protein
SORBIDRAFT_03g009870 [Sorghum bicolor]
Length = 584
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK NEKTP EW RNVVLP GGD +AS+AAAPEPE
Sbjct: 411 LLDKHGKPNEKTPTEWLRNVVLPTGGDVSIASIAAAPEPE 450
>ref|NP_001183905.1| hypothetical protein [Zea mays] gi|238015364|gb|ACR38717.1| unknown
[Zea mays] gi|413947018|gb|AFW79667.1| hypothetical
protein ZEAMMB73_071792 [Zea mays]
Length = 583
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LLDKHGK NEKTP EW RNVVLP GGD +AS+AAAPEPE
Sbjct: 410 LLDKHGKPNEKTPTEWLRNVVLPTGGDVSIASIAAAPEPE 449
>gb|ESW20376.1| hypothetical protein PHAVU_006G203800g [Phaseolus vulgaris]
Length = 571
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = -2
Query: 208 LLDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
+LDKHGK NEKTP EW RN+VLP GGDS++A +AAAPEPE
Sbjct: 390 MLDKHGKPNEKTPQEWLRNLVLPTGGDSVIAGMAAAPEPE 429
>ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
max]
Length = 589
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = -2
Query: 205 LDKHGKANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPE 89
LDKHGK NEKTP EW RN+VLP GGDS++A LAAAPEPE
Sbjct: 395 LDKHGKPNEKTPQEWLRNLVLPTGGDSVIAGLAAAPEPE 433