BLASTX nr result

ID: Zingiber23_contig00024380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00024380
         (1771 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002448075.1| hypothetical protein SORBIDRAFT_06g020570 [S...    61   2e-06

>ref|XP_002448075.1| hypothetical protein SORBIDRAFT_06g020570 [Sorghum bicolor]
            gi|241939258|gb|EES12403.1| hypothetical protein
            SORBIDRAFT_06g020570 [Sorghum bicolor]
          Length = 1469

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 84/365 (23%), Positives = 153/365 (41%), Gaps = 39/365 (10%)
 Frame = -3

Query: 1484 NPLATDDKAAASGISVKGHDHG-KGGASSTILENLTELLPKNIASQGTEESVEAHQDEKF 1308
            NP +  ++  +    +K  D   + G  + ++ + TE   K +++     +V+      F
Sbjct: 1029 NPNSQKERKTSLNSELKSRDCALEHGFGADLVNSRTE---KGVSTTSCASAVKPDYHTVF 1085

Query: 1307 PGVDNNEINFIAVFPPNSIQDEPGVSADQVLPAETXXXXXXXXXXXXXXXKHESAHD--- 1137
                N+ INF+  F  +++ D+P ++A+     E                +H  + +   
Sbjct: 1086 HPA-NDGINFLDHFNCSNLNDDPSIAAESNQNNEDESLREVKNKKKKKRKQHTGSIEPND 1144

Query: 1136 --FAYPSE--------SEKLDVKKSSTNCGLVKQDSADPSGKSSFEL--CQKGKEHNDSF 993
               + PSE        +E ++++  + N G   +D     GK++ E+   ++   + DS 
Sbjct: 1145 VLESLPSEKDIVPFVATENMNIENENVNNG---KDKKKRKGKANMEVPTAERDNPNCDSQ 1201

Query: 992  NL---TADST----------RDDGTISSDYMSHVESVKQ------TIEANRSDTYHQISE 870
             +   T DS           +D+G  S+  ++   S+        T         HQ  +
Sbjct: 1202 GIDIGTQDSLVSIVQKQRMGQDNGKESNSKVTQNVSIMPHEPEDATWNHTPEKNLHQSVD 1261

Query: 869  SQFQ---NGNHAHYSNEKTFLKSATESHVQVEKEENFNLGLHAVQNQSKPSVGTIDEETH 699
             Q +     +HAH S E     S T+ H ++ K +   +      N  KP V  + ++  
Sbjct: 1262 DQSKLLTEKDHAHISKEVRKFTS-TKPHAKIRKPDGSTIEGKVAPNP-KP-VSNLVKDFS 1318

Query: 698  AGLAASSDSTEENTPVQTKRYRLAVRKVPRSMGKKSNNHEPKTSFLIPS-AIFDNAVDES 522
                ASSDS E  TP    RYR+AVRKVP    +++  +  K S  + S AIFD+ + E 
Sbjct: 1319 MSPQASSDSIE-GTPQSANRYRVAVRKVPNKRYEETRGNSKKASRKVGSGAIFDDRISEG 1377

Query: 521  SEDDL 507
            S+D+L
Sbjct: 1378 SDDEL 1382


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