BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00024282
         (1253 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...   381   e-103
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]   381   e-103
ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-...   355   2e-95
ref|XP_006364465.1| PREDICTED: replication protein A 70 kDa DNA-...   349   1e-93
ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Popu...   347   6e-93
ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-...   340   7e-91
gb|EPS68676.1| hypothetical protein M569_06091 [Genlisea aurea]       340   9e-91
ref|XP_004173368.1| PREDICTED: replication protein A 70 kDa DNA-...   335   2e-89
ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-...   333   9e-89
gb|ESW30149.1| hypothetical protein PHAVU_002G128800g [Phaseolus...   327   5e-87
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   324   4e-86
gb|EOY25325.1| Replication factor A 1, rfa1, putative [Theobroma...   318   2e-84
ref|XP_002519884.1| replication factor A 1, rfa1, putative [Rici...   318   2e-84
ref|XP_004512401.1| PREDICTED: replication protein A 70 kDa DNA-...   315   3e-83
ref|XP_006432556.1| hypothetical protein CICLE_v10000254mg [Citr...   311   4e-82
ref|XP_004301636.1| PREDICTED: replication protein A 70 kDa DNA-...   297   5e-78
ref|NP_199353.1| replication protein RPA70C [Arabidopsis thalian...   296   9e-78
ref|XP_006281805.1| hypothetical protein CARUB_v10027980mg [Caps...   296   9e-78
ref|XP_002970633.1| hypothetical protein SELMODRAFT_441216 [Sela...   293   1e-76
ref|XP_006283088.1| hypothetical protein CARUB_v10004104mg [Caps...   291   3e-76

>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Vitis vinifera]
          Length = 882

 Score =  381 bits (979), Expect = e-103
 Identities = 215/391 (54%), Positives = 264/391 (67%), Gaps = 13/391 (3%)
 Frame = +2

Query: 119  VDLSRGAIAAISEGRGE-EGAKPVVQVWDLRLVNTQQ--TTTERYRMLLSDGTHMQQAML 289
            V+L+ GAI+ +  G  +    KPV+QV D+RLVNTQQ   + ER+R+LLSDG H+QQ ML
Sbjct: 3    VNLTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQGML 62

Query: 290  ATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPKMFDNGT 469
            ATQ N +VKSG LQK S+VQL +F+CNVI++R III+I+LDV++     IGEPK +  G 
Sbjct: 63   ATQRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQGG 122

Query: 470  SLQN-----RASMPAQPSSVDQPAIAAANRQTYGLHSATPNIGQ--NVSGGASLHQQAEP 628
            +        R S P  PSSVD P     N Q++G  S T       N++G AS +  A  
Sbjct: 123  TAGGVAPIARTSAP-MPSSVDHPGTVLGNPQSFGNSSLTGGSAAKPNMAGVASPYH-ANS 180

Query: 629  RTNNPS---FGGNYGPVSSRNMNIENIEHPKVDHGTGRLSESHPYSGNQNLRSNSTSVGV 799
             ++NP    F G   P     M        + D G    + S    G+Q+    +  V V
Sbjct: 181  FSSNPDSGRFAGTNAPPMYSKM--------QPDAGIPASAASTGSYGDQSTGFRNNKVEV 232

Query: 800  FRPPAISNVRPAQSVDRQPPPMYSNRGPLARNEAPARIIPIAALNPYQGRWTIKARVTTK 979
             R P  +  R  QS  +QPPPMY+NRGP+ARNEA ARIIPIAALNPYQGRWTIKARVT K
Sbjct: 233  SRAPYNAPARQPQSAYQQPPPMYTNRGPVARNEAAARIIPIAALNPYQGRWTIKARVTAK 292

Query: 980  GDLRRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLISKGSLKPA 1159
            G+LR YNNPRG+GKVFSFDLLDSDGGEIRVTCFN +ADQF++QIE GKVYLISKGSLKPA
Sbjct: 293  GELRHYNNPRGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPA 352

Query: 1160 QKSFNHLNNEYEIFLESQSVIQPCLDEDPTI 1252
            QK+FNHL N++EIFLES S IQPC D+D +I
Sbjct: 353  QKTFNHLRNDHEIFLESTSTIQPCFDDDNSI 383


>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
          Length = 882

 Score =  381 bits (979), Expect = e-103
 Identities = 215/391 (54%), Positives = 264/391 (67%), Gaps = 13/391 (3%)
 Frame = +2

Query: 119  VDLSRGAIAAISEGRGE-EGAKPVVQVWDLRLVNTQQ--TTTERYRMLLSDGTHMQQAML 289
            V+L+ GAI+ +  G  +    KPV+QV D+RLVNTQQ   + ER+R+LLSDG H+QQ ML
Sbjct: 3    VNLTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQGML 62

Query: 290  ATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPKMFDNGT 469
            ATQ N +VKSG LQK S+VQL +F+CNVI++R III+I+LDV++     IGEPK +  G 
Sbjct: 63   ATQRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQGG 122

Query: 470  SLQN-----RASMPAQPSSVDQPAIAAANRQTYGLHSATPNIGQ--NVSGGASLHQQAEP 628
            +        R S P  PSSVD P     N Q++G  S T       N++G AS +  A  
Sbjct: 123  TAGGVAPIARTSAP-MPSSVDHPGTVLGNPQSFGNSSLTGGSAAKPNMAGVASPYH-ANS 180

Query: 629  RTNNPS---FGGNYGPVSSRNMNIENIEHPKVDHGTGRLSESHPYSGNQNLRSNSTSVGV 799
             ++NP    F G   P     M        + D G    + S    G+Q+    +  V V
Sbjct: 181  FSSNPDSGRFAGTNAPPMYSKM--------QPDAGIPASAASTGSYGDQSTGFRNNKVEV 232

Query: 800  FRPPAISNVRPAQSVDRQPPPMYSNRGPLARNEAPARIIPIAALNPYQGRWTIKARVTTK 979
             R P  +  R  QS  +QPPPMY+NRGP+ARNEA ARIIPIAALNPYQGRWTIKARVT K
Sbjct: 233  SRAPYNAPARQPQSAYQQPPPMYTNRGPVARNEAXARIIPIAALNPYQGRWTIKARVTAK 292

Query: 980  GDLRRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLISKGSLKPA 1159
            G+LR YNNPRG+GKVFSFDLLDSDGGEIRVTCFN +ADQF++QIE GKVYLISKGSLKPA
Sbjct: 293  GELRHYNNPRGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPA 352

Query: 1160 QKSFNHLNNEYEIFLESQSVIQPCLDEDPTI 1252
            QK+FNHL N++EIFLES S IQPC D+D +I
Sbjct: 353  QKTFNHLRNDHEIFLESTSTIQPCFDDDNSI 383


>ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Solanum lycopersicum]
          Length = 899

 Score =  355 bits (911), Expect = 2e-95
 Identities = 199/389 (51%), Positives = 253/389 (65%), Gaps = 8/389 (2%)
 Frame = +2

Query: 110  MAAVDLSRGAIAAISEGRGE-EGAKPVVQVWDLRLVNTQQTTT--ERYRMLLSDGTHMQQ 280
            M  ++L+ GA+  +S G G  E  KPV+Q+ D+RLVNTQ  T   ERYR+LLSDGTH+QQ
Sbjct: 1    MPPINLTEGAVEMLSIGEGHPEEFKPVLQITDVRLVNTQNQTNNNERYRLLLSDGTHIQQ 60

Query: 281  AMLATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPKMF- 457
             MLATQ N +++S  ++K +I+Q+NEF+ NVIQNR III+I LD+LV +   IG+PK + 
Sbjct: 61   GMLATQKNDLIRSQQIRKGTIIQMNEFVRNVIQNRVIIIIIELDILVDTCDQIGDPKHYV 120

Query: 458  --DNGTSLQNRASMPAQPSSVDQPAIAAANRQTYGLHSATPNIGQNVSGGASLHQQAEPR 631
              D       R + P QPS+ +Q    + N Q++   SAT                + PR
Sbjct: 121  RTDGSAPSVPRPAAPLQPST-NQLGGVSVNPQSFASLSATSG--------------STPR 165

Query: 632  TNNPSFGGNYGPVSSRNMNIENIEHPKVDHGTGRLSESHPY--SGNQNLRSNSTSVGVFR 805
             N    GG   P  +R+           D  +GR S   P           +   +   R
Sbjct: 166  PNMS--GGMQSPEMNRSSVYNTTSVGNTD--SGRYSSGAPLYPRAESGPAISRAPMNYVR 221

Query: 806  PPAISNVRPAQSVDRQPPPMYSNRGPLARNEAPARIIPIAALNPYQGRWTIKARVTTKGD 985
            PP  S  +P QS  +QP PMYSNRGP+A+NEAP RI+PIAALNPYQGRWTIKARVT K +
Sbjct: 222  PPQPSYQQPPQSSYQQPSPMYSNRGPIAKNEAPPRIVPIAALNPYQGRWTIKARVTAKTE 281

Query: 986  LRRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLISKGSLKPAQK 1165
            LR YNN RG+GKVFSFDLLDSDGGEIRVTCFN++ADQF+DQIE G+VY ISKGSLKPAQK
Sbjct: 282  LRHYNNQRGDGKVFSFDLLDSDGGEIRVTCFNSVADQFYDQIEPGRVYQISKGSLKPAQK 341

Query: 1166 SFNHLNNEYEIFLESQSVIQPCLDEDPTI 1252
            ++NHL N++EI LES SV+QPC ++D  I
Sbjct: 342  NYNHLPNDHEIMLESTSVVQPCFEDDRAI 370


>ref|XP_006364465.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like
            [Solanum tuberosum]
          Length = 905

 Score =  349 bits (896), Expect = 1e-93
 Identities = 198/389 (50%), Positives = 251/389 (64%), Gaps = 8/389 (2%)
 Frame = +2

Query: 110  MAAVDLSRGAIAAISEGRGE-EGAKPVVQVWDLRLVNTQQTTT--ERYRMLLSDGTHMQQ 280
            M  ++L+ GAI  +S G G  E  KPV+Q+ D+RLVNTQ  T   ERYR+L+SDGTH+QQ
Sbjct: 1    MPPINLTEGAIEMLSIGEGHPEEFKPVLQITDVRLVNTQNQTNNNERYRILISDGTHIQQ 60

Query: 281  AMLATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPKMF- 457
             MLATQ N +++S  ++K +I+Q+ EF+ NVIQNR III+I LD+L+ +   IG+PK + 
Sbjct: 61   GMLATQKNDLIRSQQIRKGTIIQMKEFVRNVIQNRVIIIIIELDILLETCDQIGDPKHYV 120

Query: 458  --DNGTSLQNRASMPAQPSSVDQPAIAAANRQTYGLHSATPNIGQNVSGGASLHQQAEPR 631
              D       R + P QPS+ +Q    + N Q+    SAT                + PR
Sbjct: 121  RTDGSVPSVPRPAAPLQPST-NQLGGVSVNPQSIASLSATSG--------------STPR 165

Query: 632  TNNPSFGGNYGPVSSRNMNIENIEHPKVDHGTGRLSESHPY--SGNQNLRSNSTSVGVFR 805
             N    GG   P  +R+           D  +GR S   P           +   +   R
Sbjct: 166  PNMS--GGMQSPEMNRSSVYNTASVGNTD--SGRYSSGAPLYPRAESGPAISRAPMNYVR 221

Query: 806  PPAISNVRPAQSVDRQPPPMYSNRGPLARNEAPARIIPIAALNPYQGRWTIKARVTTKGD 985
            PP  S  +P QS  +QP PMYSNRGP+A+NEAP RIIPIAALNPYQGRWTIKARVT K +
Sbjct: 222  PPQPSYQQPPQSSYQQPSPMYSNRGPVAKNEAPPRIIPIAALNPYQGRWTIKARVTAKTE 281

Query: 986  LRRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLISKGSLKPAQK 1165
            LR YNN RG+GKVFSFDLLDSDGGEIRVTCFN++ADQF+DQIE G+VY ISKGSLKPAQK
Sbjct: 282  LRHYNNQRGDGKVFSFDLLDSDGGEIRVTCFNSVADQFYDQIEPGRVYQISKGSLKPAQK 341

Query: 1166 SFNHLNNEYEIFLESQSVIQPCLDEDPTI 1252
            ++NHL N++EI LES SV+QPC ++D  I
Sbjct: 342  NYNHLPNDHEIMLESTSVVQPCFEDDRAI 370


>ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Populus trichocarpa]
            gi|550342884|gb|EEE79356.2| hypothetical protein
            POPTR_0003s10170g [Populus trichocarpa]
          Length = 854

 Score =  347 bits (890), Expect = 6e-93
 Identities = 197/381 (51%), Positives = 255/381 (66%), Gaps = 3/381 (0%)
 Frame = +2

Query: 119  VDLSRGAIAAISEGRGEEGA-KPVVQVWDLRLVNTQQTT-TERYRMLLSDGTHMQQAMLA 292
            ++L+ GAI+ I+ G       KP +QV DL+ V T+Q   ++R+R++LSDG+H+QQAML 
Sbjct: 1    MNLTEGAISKITSGGATSAELKPTLQVTDLKQVQTKQPQQSDRFRLVLSDGSHLQQAMLG 60

Query: 293  TQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPKMFDNGTS 472
            TQ+N +VK G+L+  SIVQLN++ C  +Q R III++ L ++      IG P       S
Sbjct: 61   TQINHLVKDGNLRIGSIVQLNQYTCTTVQGRMIIIILELALVAEDCELIGNP------VS 114

Query: 473  LQNRASMPAQPSSVDQPAIAAANRQTYGLHSATPNIGQNVSGGASLHQQAE-PRTNNPSF 649
             Q R+S P+ PS V QP    A+ +++G +S T  +  N +  A+  Q  E  + +N   
Sbjct: 115  AQ-RSSGPS-PSPVAQPGNVNASPKSFGTNSVTGGVVGNQNMSAAPVQSPEINQFHNTPP 172

Query: 650  GGNYGPVSSRNMNIENIEHPKVDHGTGRLSESHPYSGNQNLRSNSTSVGVFRPPAISNVR 829
              NYGP      N   + +PKV+   G +  S  Y  NQN    +    + +P   S  R
Sbjct: 173  SSNYGPGRFAPTNAPPL-YPKVEATAGSVPSSGLYV-NQNAGYLNPRPEISQPHMGSYSR 230

Query: 830  PAQSVDRQPPPMYSNRGPLARNEAPARIIPIAALNPYQGRWTIKARVTTKGDLRRYNNPR 1009
            P QS  +QPPPMYSNRGP+ARNEAP RIIPI ALNPYQGRWTIKARVT KG+LR YNN R
Sbjct: 231  PPQSAYQQPPPMYSNRGPVARNEAPPRIIPITALNPYQGRWTIKARVTAKGELRHYNNTR 290

Query: 1010 GEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLISKGSLKPAQKSFNHLNNE 1189
            G+GKVFSFDLLDSDGGEIRVTCFN +ADQF+ QIE G+VYLISKG+LKPAQK+FNHL ++
Sbjct: 291  GDGKVFSFDLLDSDGGEIRVTCFNQVADQFYHQIEAGRVYLISKGNLKPAQKNFNHLRHD 350

Query: 1190 YEIFLESQSVIQPCLDEDPTI 1252
             EIFLES S IQPC ++D TI
Sbjct: 351  LEIFLESTSTIQPCFEDDNTI 371


>ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Cucumis sativus]
          Length = 861

 Score =  340 bits (872), Expect = 7e-91
 Identities = 196/397 (49%), Positives = 257/397 (64%), Gaps = 12/397 (3%)
 Frame = +2

Query: 98   LIGGMAAVDLSRGAIAAISEGRGE-EGAKPVVQVWDLRLVNT-QQTTTERYRMLLSDGTH 271
            +   MA+  L+ GA+  I +     E  +P++QV DL+LVNT QQ+ +ER+R+L+SDGTH
Sbjct: 1    MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60

Query: 272  MQQAMLATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPK 451
             QQ ML TQ+N +VKSG LQK SIV+L +++CN +Q R IIIVI LDV+      IGEP 
Sbjct: 61   FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEP- 119

Query: 452  MFDNGTSLQNRASMPAQPSSVDQPAIAAANRQTYGLHSATPNIGQNVSGGASLHQQAEPR 631
                         + A  SS +  A++     + G   A+P  G    G  S     +P+
Sbjct: 120  -------------VSATRSSAN--ALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPK 164

Query: 632  TNN---PSFGGNYGPVSSRNMN--IENIEHPKVDHGTGRLSESHPYSGN---QNLRSNST 787
             N    P  G    P  +   +  I    + K D G+ R +   P +G+   Q +  +++
Sbjct: 165  VNQSHVPHMGSYSNPPETGRFSASIAPPSYSKTDSGS-RFNGPSPLTGSYGDQKMAYHNS 223

Query: 788  SVGVFRPPAISNV--RPAQSVDRQPPPMYSNRGPLARNEAPARIIPIAALNPYQGRWTIK 961
               + RPP  SN   RP Q + +QPP MYSNRGP+A+NEA  RI+PI+ALNPYQGRWTIK
Sbjct: 224  GSDIPRPPLNSNAYARP-QPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIK 282

Query: 962  ARVTTKGDLRRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLISK 1141
            ARVT+KG+LR YNNPRG+GKVFSFDLLD+  GEIRVTCFNT+ADQF++QIE GKVY ISK
Sbjct: 283  ARVTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISK 342

Query: 1142 GSLKPAQKSFNHLNNEYEIFLESQSVIQPCLDEDPTI 1252
            GSLKPAQK+FNHL N+YEIFLE+ S IQPC ++D +I
Sbjct: 343  GSLKPAQKNFNHLKNDYEIFLENTSTIQPCFEDDQSI 379


>gb|EPS68676.1| hypothetical protein M569_06091 [Genlisea aurea]
          Length = 832

 Score =  340 bits (871), Expect = 9e-91
 Identities = 203/394 (51%), Positives = 255/394 (64%), Gaps = 16/394 (4%)
 Frame = +2

Query: 110  MAAVDLSRGAIAAISEGRGE-EGAKPVVQVWDLRLVNTQ-QTTTERYRMLLSDGTHMQQA 283
            M  V+L+ GAIAA+S G  +    KPV+Q+ ++RLVN Q Q+  ERYR+LLSDG+  QQ 
Sbjct: 1    MPPVNLTEGAIAALSGGNAQGTDIKPVLQIAEIRLVNAQNQSNNERYRLLLSDGSFTQQG 60

Query: 284  MLATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPKMFDN 463
            MLATQ N +V+S  LQK SIVQL +F+CN+IQNR III+I+LDV+V     IGEPK +  
Sbjct: 61   MLATQRNDLVRSQKLQKGSIVQLTQFVCNLIQNRMIIIIIDLDVIVERCDPIGEPKPYPI 120

Query: 464  GTSLQNRASMPAQPSSVDQPAIAAANRQTYGLHSATPNIGQNVSGGASLHQQAEPRTNNP 643
                 N +S+P+ P +V+QP+    N      HS+          G S    + PR   P
Sbjct: 121  KPD-GNASSLPS-PQTVNQPSAGNVNP-----HSSYV--------GVSPSSVSAPRP--P 163

Query: 644  SFGG-NYGPVSSRNMNIENIEHPKVDHGTGRLSESHPYSGNQNL----RSNSTSV----- 793
            + GG N G                 D   GR + SH  S + N+    R NS +V     
Sbjct: 164  NVGGINRGS----------------DSWEGRNAHSHDASFSSNMDQSARFNSPNVLPKYP 207

Query: 794  ---GVFRPPAISNVRPAQSVD-RQPPPMYSNRGPLARNEAPARIIPIAALNPYQGRWTIK 961
               GV R  A + VRP Q     Q  P Y NRGP+ARNEA  RIIPIAALNPYQGRWTIK
Sbjct: 208  DEGGVSRGLATNYVRPPQQPPYHQQAPSYVNRGPIARNEAAPRIIPIAALNPYQGRWTIK 267

Query: 962  ARVTTKGDLRRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLISK 1141
            ARVTTKG++R YNNPRG+GKVFSFDLLDS+GGEIRVTCFN +ADQF+ QIE GKVY++S+
Sbjct: 268  ARVTTKGEMRHYNNPRGDGKVFSFDLLDSEGGEIRVTCFNAVADQFYQQIEAGKVYMVSR 327

Query: 1142 GSLKPAQKSFNHLNNEYEIFLESQSVIQPCLDED 1243
            G+L+PAQK+FNHLNNE+EI L++ S +Q C +ED
Sbjct: 328  GTLRPAQKAFNHLNNEHEIVLDNTSTVQHCFEED 361


>ref|XP_004173368.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
            partial [Cucumis sativus]
          Length = 374

 Score =  335 bits (860), Expect = 2e-89
 Identities = 194/392 (49%), Positives = 253/392 (64%), Gaps = 12/392 (3%)
 Frame = +2

Query: 98   LIGGMAAVDLSRGAIAAISEGRGE-EGAKPVVQVWDLRLVNT-QQTTTERYRMLLSDGTH 271
            +   MA+  L+ GA+  I +     E  +P++QV DL+LVNT QQ+ +ER+R+L+SDGTH
Sbjct: 1    MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60

Query: 272  MQQAMLATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPK 451
             QQ ML TQ+N +VKSG LQK SIV+L +++CN +Q R IIIVI LDV+      IGEP 
Sbjct: 61   FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEP- 119

Query: 452  MFDNGTSLQNRASMPAQPSSVDQPAIAAANRQTYGLHSATPNIGQNVSGGASLHQQAEPR 631
                         + A  SS +  A++     + G   A+P  G    G  S     +P+
Sbjct: 120  -------------VSATRSSAN--ALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPK 164

Query: 632  TNN---PSFGGNYGPVSSRNMN--IENIEHPKVDHGTGRLSESHPYSGN---QNLRSNST 787
             N    P  G    P  +   +  I    + K D G+ R +   P +G+   Q +  +++
Sbjct: 165  VNQSHVPHMGSYSNPPETGRFSASIAPPSYSKTDSGS-RFNGPSPLTGSYGDQKMAYHNS 223

Query: 788  SVGVFRPPAISNV--RPAQSVDRQPPPMYSNRGPLARNEAPARIIPIAALNPYQGRWTIK 961
               + RPP  SN   RP Q + +QPP MYSNRGP+A+NEA  RI+PI+ALNPYQGRWTIK
Sbjct: 224  GSDIPRPPLNSNAYARP-QPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIK 282

Query: 962  ARVTTKGDLRRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLISK 1141
            ARVT+KG+LR YNNPRG+GKVFSFDLLD+  GEIRVTCFNT+ADQF++QIE GKVY ISK
Sbjct: 283  ARVTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISK 342

Query: 1142 GSLKPAQKSFNHLNNEYEIFLESQSVIQPCLD 1237
            GSLKPAQK+FNHL N+YEIFLE+ S IQPC +
Sbjct: 343  GSLKPAQKNFNHLKNDYEIFLENTSTIQPCFE 374


>ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like
            [Glycine max]
          Length = 894

 Score =  333 bits (854), Expect = 9e-89
 Identities = 186/384 (48%), Positives = 241/384 (62%), Gaps = 5/384 (1%)
 Frame = +2

Query: 116  AVDLSRGAIAAISEGRGEEGAKPVVQVWDLRLVNTQQTTT-ERYRMLLSDGTHMQQAMLA 292
            AV L++ AI  +      EG +PV+QV +L+LV +QQ +  ERYR++LSDG+H QQ MLA
Sbjct: 2    AVSLTQSAIMEMCSANCPEGLQPVLQVIELKLVQSQQNSNVERYRLVLSDGSHYQQGMLA 61

Query: 293  TQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPKMFDNGTS 472
            TQ N +V +G LQK S+V+L +FICNV+Q+R III+++LDV++     IGEP        
Sbjct: 62   TQKNDLVHAGKLQKGSVVRLTQFICNVVQSRKIIIIVDLDVVLDKCELIGEPV------- 114

Query: 473  LQNRASMPAQPSSVDQPAIAAANRQTYGLHSATP---NIGQNVSGGASLHQQAEPRTNNP 643
                      P+  D P  +A  +   G+ S  P   N   +  G  +    A P  ++P
Sbjct: 115  ----------PAPKDAPTESATGQS--GVTSGNPQLLNSSSHTGGMPARPNVASPSPDHP 162

Query: 644  SFGGNYGPVSSRNMNIENIEHPKVDHGTGRLSESHPYSGNQNLRSNSTSVGVFRPPAISN 823
                +   V S N       +PKV+HG  R +     SG QN    +      RP   S 
Sbjct: 163  KVNPSASGVYSSNAPPT---YPKVEHGVSRSAPFSGSSGGQNTGFRNPQFEASRPLQNSY 219

Query: 824  VRPAQS-VDRQPPPMYSNRGPLARNEAPARIIPIAALNPYQGRWTIKARVTTKGDLRRYN 1000
             RP Q  + RQP PMY+NR P+ RNEA  RIIPIAALNPYQ  WTIKARVT KG+LR Y 
Sbjct: 220  ARPPQQPMYRQPSPMYTNRAPMGRNEAAPRIIPIAALNPYQSMWTIKARVTFKGELRHYT 279

Query: 1001 NPRGEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLISKGSLKPAQKSFNHL 1180
            N RG+GKVFSFDLLDSDGGEIR TCFN +ADQF++ IE GKVYLIS+GS+KPAQK+FNHL
Sbjct: 280  NARGDGKVFSFDLLDSDGGEIRATCFNAVADQFYNVIEAGKVYLISRGSIKPAQKNFNHL 339

Query: 1181 NNEYEIFLESQSVIQPCLDEDPTI 1252
             N+ E+ L+  S+IQPCLD++ +I
Sbjct: 340  RNDQELTLDVASIIQPCLDDNDSI 363


>gb|ESW30149.1| hypothetical protein PHAVU_002G128800g [Phaseolus vulgaris]
          Length = 866

 Score =  327 bits (839), Expect = 5e-87
 Identities = 189/388 (48%), Positives = 246/388 (63%), Gaps = 9/388 (2%)
 Frame = +2

Query: 116  AVDLSRGAIAAISEGRGEEGAKPVVQVWDLRLVNTQQTT-TERYRMLLSDGTHMQQAMLA 292
            A  L+ GAI  I       G KPV+QV DL+LV +QQ + TERYR++LSDG+  QQ MLA
Sbjct: 2    AGSLTPGAIKEICGANCSSGLKPVLQVIDLKLVQSQQASNTERYRLVLSDGSFYQQGMLA 61

Query: 293  TQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPKMFDNGTS 472
            TQMN +V SG LQK S+V+L +FICN +QNR II++I+LDV+V     IGEP        
Sbjct: 62   TQMNELVHSGKLQKGSVVRLVQFICNDVQNRKIIVIIDLDVVVEKCELIGEPVALPKDGP 121

Query: 473  LQNRASMPAQPSSVDQPAIAAANRQTYGLHSATPNIGQNVSGGASLHQQAEPRTNNPS-F 649
             ++            QP     NR   G  +A PN+        ++     PR N  S +
Sbjct: 122  AESSTGQSGVTPGNSQPL---NNRSHSGGVTARPNM--------AVPSPDHPRVNASSVY 170

Query: 650  GGNYGPVSSRNMNIENIEHPKVDHGTGRLSESHPYSGNQNLRSNSTSVGVFRPPAISN-- 823
             G     SS + N     +PKV+ G    S S P++G+   +S+    G+  P + ++  
Sbjct: 171  TGISNSGSSYSSNAPPT-YPKVESGVN--SRSAPFTGSHGDQSS----GIGHPQSEASRS 223

Query: 824  -----VRPAQSVDRQPPPMYSNRGPLARNEAPARIIPIAALNPYQGRWTIKARVTTKGDL 988
                  RP Q + RQP PMY+NRGP+ +NEA  RIIPIAALNPYQ  WTIKARVT KG+L
Sbjct: 224  FPNSYARPPQPMYRQPSPMYNNRGPMGKNEAAPRIIPIAALNPYQNMWTIKARVTAKGEL 283

Query: 989  RRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLISKGSLKPAQKS 1168
            R YNN RG+GKVFSFDLLDSDGG+IR TCFN++ADQF++ IE GKVYL+S+GS+KPAQK+
Sbjct: 284  RHYNNARGDGKVFSFDLLDSDGGQIRATCFNSVADQFYNLIEAGKVYLVSRGSVKPAQKN 343

Query: 1169 FNHLNNEYEIFLESQSVIQPCLDEDPTI 1252
            FNHL N+ E+ L+  S+IQPC D+D +I
Sbjct: 344  FNHLPNDQELTLDMTSIIQPCPDDDNSI 371


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  324 bits (831), Expect = 4e-86
 Identities = 188/381 (49%), Positives = 237/381 (62%), Gaps = 5/381 (1%)
 Frame = +2

Query: 116  AVDLSRGAIAAISEGRGEEGAKPVVQVWDLRLVNTQQTT-TERYRMLLSDGTHMQQAMLA 292
            AV+L++GAI  +      E   PV+QV DL+LV +QQ + TERYR++LSDG H QQ MLA
Sbjct: 2    AVNLTQGAIVTMCFT--SEDLHPVLQVIDLKLVQSQQNSGTERYRVVLSDGLHYQQGMLA 59

Query: 293  TQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPKMFDNGTS 472
            TQ N +V SG LQK SIV+L++FICNV+QNR III+++LDV++     IG+P        
Sbjct: 60   TQKNELVHSGRLQKGSIVKLSQFICNVVQNRKIIIIVDLDVIMDKCDLIGKPDPAPKEDP 119

Query: 473  LQNRASMPAQPSSVDQPAIAAANRQTYGLHSATPNIGQNVSGGASLHQQAEPRTNNPSFG 652
             Q+  S      S      + A    Y    +    G NV    +L     P  N P+  
Sbjct: 120  AQSAVSHAGNVQSAAGHLGSNAGNSQYLNSGSHTGGGVNVRPNVALPSMDRPTVNPPASV 179

Query: 653  GNYGPVSSRNMNIENIE--HPKVDHGTG--RLSESHPYSGNQNLRSNSTSVGVFRPPAIS 820
                   S      N    +PK + G    R +  +  SG QN    +      RP   S
Sbjct: 180  VYSNGSGSARYGASNAPPPYPKPEPGVSLNRPASVNGSSGEQNTSFRNPLCETSRPVQNS 239

Query: 821  NVRPAQSVDRQPPPMYSNRGPLARNEAPARIIPIAALNPYQGRWTIKARVTTKGDLRRYN 1000
             VRP Q V++QP PMY NRGP  RN+AP RIIPI+ALNPYQ  WTIKARVT KG+LR Y 
Sbjct: 240  YVRPPQPVNQQPSPMY-NRGPTGRNDAPPRIIPISALNPYQNMWTIKARVTAKGELRTYT 298

Query: 1001 NPRGEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLISKGSLKPAQKSFNHL 1180
            N RG+GKVFSFDLLDSD GEIR TCFNT+A+QF++ IEVGKVYL+S+GSLKPAQK+FNHL
Sbjct: 299  NSRGQGKVFSFDLLDSDRGEIRATCFNTVAEQFYNVIEVGKVYLVSRGSLKPAQKNFNHL 358

Query: 1181 NNEYEIFLESQSVIQPCLDED 1243
             N+ EI L+  SVIQPC+D++
Sbjct: 359  PNDQEITLDITSVIQPCVDDN 379


>gb|EOY25325.1| Replication factor A 1, rfa1, putative [Theobroma cacao]
          Length = 911

 Score =  318 bits (816), Expect = 2e-84
 Identities = 200/435 (45%), Positives = 258/435 (59%), Gaps = 57/435 (13%)
 Frame = +2

Query: 119  VDLSRGAIAAI--SEGRGEEGAKPVVQVWDLRLVNT----------QQTTTERYRMLLSD 262
            V+L+ GA+  I   E   E+  KPV+QV +L+ V T          +   +ER+R+LLSD
Sbjct: 3    VNLTGGAVGRIINREVASEKDLKPVLQVIELKEVQTTSKNQPQQQQEPKKSERFRLLLSD 62

Query: 263  GTHMQQAMLATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIG 442
            G+  QQ MLAT  N +VKS  LQ  SIVQL ++ICNVIQ+R I+I+I L+V++     IG
Sbjct: 63   GSLAQQGMLATNKNELVKSSKLQVGSIVQLTQYICNVIQDRMIVIIIELEVIIEKYDIIG 122

Query: 443  EPKMFDNGTSLQNRASMPAQPSSV--DQPAIAAANRQTYG-----------LHSATPNIG 583
            +P            A   ++P+ V  DQP        T+G           L+SA   + 
Sbjct: 123  KPVP----------APKSSRPTEVPTDQPGTVMVQTNTFGGSSVGGSKADKLNSAGTPLQ 172

Query: 584  Q---NVSGGASLHQQAEP----RTNNPS----------------FGGNYG------PVSS 676
            Q   N   G+S   QAEP      N+P                   G YG      PV  
Sbjct: 173  QPRMNPLHGSSFPNQAEPVRYPAANSPPVCPKAEPSAGFPGSSPLSGPYGAQNQAEPVRY 232

Query: 677  RNMNIENIEHPKVDHGTGRLSESHPYSGNQNLRS---NSTSVGVFRPPAISNVRPAQSVD 847
               N   + +PK +   G    S P SG    +S   ++      RP + SN +P  +  
Sbjct: 233  PAANSPPV-YPKAEPSAG-FPGSSPLSGPYGAQSTGFHNPRPAASRPLSTSNRQPIPAY- 289

Query: 848  RQPPPMYSNRGPLARNEAPARIIPIAALNPYQGRWTIKARVTTKGDLRRYNNPRGEGKVF 1027
            +QP PMYSNRGP+A+N+AP RIIPI+ALNPYQGRWTIKARVT KG+LRRY+N RGEGKVF
Sbjct: 290  QQPSPMYSNRGPVAKNDAPPRIIPISALNPYQGRWTIKARVTAKGELRRYSNARGEGKVF 349

Query: 1028 SFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLISKGSLKPAQKSFNHLNNEYEIFLE 1207
            SFDLLDSDGGEIRVTCFNT+ DQFF+QIE G+VY+IS+G+LKPAQK+FNHLNN+YEI L+
Sbjct: 350  SFDLLDSDGGEIRVTCFNTVVDQFFNQIEAGRVYMISRGTLKPAQKAFNHLNNDYEICLD 409

Query: 1208 SQSVIQPCLDEDPTI 1252
            S S+IQPC ++D  I
Sbjct: 410  STSIIQPCYEDDNKI 424


>ref|XP_002519884.1| replication factor A 1, rfa1, putative [Ricinus communis]
            gi|223540930|gb|EEF42488.1| replication factor A 1, rfa1,
            putative [Ricinus communis]
          Length = 901

 Score =  318 bits (816), Expect = 2e-84
 Identities = 188/405 (46%), Positives = 247/405 (60%), Gaps = 24/405 (5%)
 Frame = +2

Query: 110  MAAVDLSRGAIAAISEGRGEEGA-KPVVQVWDLRLVNTQQTT-TERYRMLLSDGTHMQQA 283
            MA ++LS GAI+ I+ G       KP +QV +L+ V T+Q   +ER+R++LSDG+H+QQA
Sbjct: 1    MANMNLSEGAISKITSGGATAAELKPTLQVTELKQVQTKQPQQSERFRLILSDGSHLQQA 60

Query: 284  MLATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTII--------------IVINLDVLV 421
            ML TQ+N +VK G+L+  S+VQL ++ C  +Q R ++                + L+ ++
Sbjct: 61   MLGTQINHLVKDGNLRPGSVVQLIQYTCTTVQGRMLLGSRSCIGCERNRGRAYLLLNEIL 120

Query: 422  SSNSAIGEPKMFDNGTSLQNRASMPAQPSSVDQPAIAAANRQTYGLHSATPNIGQNVSGG 601
                +  +  +  N  S Q     P+ PS+ DQP  + AN Q+YG  S +P  G   +  
Sbjct: 121  LGFFSFAKCAIIGNPVSAQKTLG-PSHPST-DQPVSSPANPQSYG--SGSPAGGMVENPN 176

Query: 602  ASLHQQAEPRTNNPSFGGNYGPVSSRNMNIENIE--HPKVDHGTGRLSESHPYSGNQNLR 775
             ++     PR N      +     S      N    H K + G+G      P S + N  
Sbjct: 177  LNVSSLQNPRMNQLHGSSHPSSYDSGRYVTTNAPPCHLKAEPGSGL-----PGSASMNRS 231

Query: 776  SNSTSVGVFRP-PAISNVR-----PAQSVDRQPPPMYSNRGPLARNEAPARIIPIAALNP 937
             N  S G   P P I         P     +QPPPMYSNRGP+A+NEAP RI+PI+ALNP
Sbjct: 232  YNEQSAGFCNPRPEIPQTTGTYPYPPCPAYQQPPPMYSNRGPVAKNEAPPRIMPISALNP 291

Query: 938  YQGRWTIKARVTTKGDLRRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEV 1117
            YQGRWTIKARVT KG+LR YNN RG+GKVFSFDLLDSDGGEIRV CFNT+ADQF+ QIE 
Sbjct: 292  YQGRWTIKARVTAKGELRHYNNVRGDGKVFSFDLLDSDGGEIRVICFNTVADQFYHQIEA 351

Query: 1118 GKVYLISKGSLKPAQKSFNHLNNEYEIFLESQSVIQPCLDEDPTI 1252
            GKVYLIS+G+LKPAQK+FNHL+N+ EIFLES SVIQPC ++D  I
Sbjct: 352  GKVYLISRGNLKPAQKTFNHLHNDLEIFLESNSVIQPCFEDDDAI 396


>ref|XP_004512401.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Cicer arietinum]
          Length = 917

 Score =  315 bits (806), Expect = 3e-83
 Identities = 187/391 (47%), Positives = 249/391 (63%), Gaps = 12/391 (3%)
 Frame = +2

Query: 116  AVDLSRGAIAAISEGRGEEGAKPVVQVWDLRLVNTQQ-TTTERYRMLLSDGTHMQQAMLA 292
            AV+L++GAI  I+     E  +PV+QV DL+LV +QQ ++TERYR++LSDG++ QQ MLA
Sbjct: 2    AVNLTQGAI--ITMCFTSEELQPVLQVIDLKLVQSQQNSSTERYRLVLSDGSYYQQGMLA 59

Query: 293  TQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPKMFDNGTS 472
            TQ N +V SG LQK SIV+L++FICN +QNR III++ LDV++     +GEP        
Sbjct: 60   TQKNELVHSGRLQKGSIVKLHQFICNDVQNRKIIIIVELDVILDKCDLVGEPVPAPKEAP 119

Query: 473  LQNRASMPAQPSSVDQPAIAAANRQ--TYGLHSATPNIGQNVSGGASLHQQAEPRTNNPS 646
             Q+  S   Q  +V   A  + N    +  L+S +   G N     S+     P+ N P+
Sbjct: 120  SQSAVS---QARNVQSAAGQSGNTTGISQSLNSNSHAGGINARPNVSMPSMDRPKVNPPA 176

Query: 647  ---FGGNYGPVSSRNMNIENIEHPKVDHGTG--RLSESHPYSGNQNLRSNSTSVGVFRPP 811
               +  +  PV     N     +PK + G+   R + S+   G QN    +      +P 
Sbjct: 177  SSVYSNSSEPVRYGASNAPP-SYPKPEPGSSLNRPAPSNGSYGVQNTSFRNPQFEASKPM 235

Query: 812  AISNVRPAQSVDRQPPPMYSN----RGPLARNEAPARIIPIAALNPYQGRWTIKARVTTK 979
              SN RP Q + R    MY+N    RGP+ RN+AP RI+PI+ALNPYQ  WTIKARVT K
Sbjct: 236  QNSNARPPQPMYRPQSSMYTNTNTNRGPIGRNDAPPRIVPISALNPYQSNWTIKARVTAK 295

Query: 980  GDLRRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLISKGSLKPA 1159
            G+LR YNN RGEGKVFSFDLLDSDGGEIR TCFN +ADQF++ IE GKV+LIS+G+LKPA
Sbjct: 296  GELRHYNNARGEGKVFSFDLLDSDGGEIRATCFNAVADQFYNVIEHGKVFLISRGNLKPA 355

Query: 1160 QKSFNHLNNEYEIFLESQSVIQPCLDEDPTI 1252
            QK+FNHL N++EI L+  SVIQP L++D +I
Sbjct: 356  QKNFNHLPNDHEITLDITSVIQPWLEDDNSI 386


>ref|XP_006432556.1| hypothetical protein CICLE_v10000254mg [Citrus clementina]
            gi|568834454|ref|XP_006471343.1| PREDICTED: replication
            protein A 70 kDa DNA-binding subunit C-like [Citrus
            sinensis] gi|557534678|gb|ESR45796.1| hypothetical
            protein CICLE_v10000254mg [Citrus clementina]
          Length = 858

 Score =  311 bits (797), Expect = 4e-82
 Identities = 182/389 (46%), Positives = 242/389 (62%), Gaps = 10/389 (2%)
 Frame = +2

Query: 116  AVDLSRGAIAAISEG--RGEEGAKPVVQVWDLRLV-----NTQQTTTERYRMLLSDGTHM 274
            A++L+ GAI+ I +G    +    PV+QV DL+LV       QQ   +R+RM+LSDG+  
Sbjct: 2    AINLTEGAISLICKGDVTTDNHLMPVLQVMDLKLVVSKQQQQQQHQQQRFRMVLSDGSRS 61

Query: 275  QQAMLATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPKM 454
            QQ MLATQ N +V SG LQ  S+V+L +F CNVIQNR I+IV++LDV++     IG+P  
Sbjct: 62   QQGMLATQRNELVTSGLLQIGSVVRLTKFTCNVIQNRMIVIVMDLDVIIDKCDPIGKP-- 119

Query: 455  FDNGTSLQNRASMPAQ-PSSVDQPAIAAANRQTYGLHSATPNIGQNVSGGASLHQQAEPR 631
                        +PAQ PSS +QP     N Q+    +AT         G SL      R
Sbjct: 120  ------------VPAQRPSSNEQPGSVTGNPQS----NAT---------GVSLQHHNNTR 154

Query: 632  TNNPSFGGNYGPVSSR-NMNIE-NIEHPKVDHGTGRLSESHPYSGNQNLRSNSTSVGVFR 805
             +      + GP +     N+  N   P+V  G+G  S       NQ+   ++      R
Sbjct: 155  VSQLPGDTDAGPAARHVGSNLPPNYFKPEVGAGSGSFS-------NQSASFSNPRPEFSR 207

Query: 806  PPAISNVRPAQSVDRQPPPMYSNRGPLARNEAPARIIPIAALNPYQGRWTIKARVTTKGD 985
            P A +  R  Q+   Q P MY+NRGP+ ++E P+RIIPIAALNPY G+WTIKARVT KG+
Sbjct: 208  PYASNYARTPQAPYMQSPSMYANRGPVGKSEVPSRIIPIAALNPYMGKWTIKARVTAKGE 267

Query: 986  LRRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLISKGSLKPAQK 1165
            LR YNN RG+GKVF FDLLDSDGGEIRVTCFN +ADQF+ Q+E GK+YL+S+GSLKPAQK
Sbjct: 268  LRHYNNQRGDGKVFHFDLLDSDGGEIRVTCFNAVADQFYHQVEAGKIYLVSRGSLKPAQK 327

Query: 1166 SFNHLNNEYEIFLESQSVIQPCLDEDPTI 1252
            +FNHL+N+ EIFL+  S++Q C ++D +I
Sbjct: 328  NFNHLHNDLEIFLDMTSMVQLCYEDDASI 356


>ref|XP_004301636.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Fragaria vesca subsp. vesca]
          Length = 874

 Score =  297 bits (761), Expect = 5e-78
 Identities = 183/414 (44%), Positives = 242/414 (58%), Gaps = 35/414 (8%)
 Frame = +2

Query: 116  AVDLSRGAIAAISEGRGEEGAKPVVQVWDLRLVNTQQT--TTERYRMLLSDGTHMQQAML 289
            AV L+ GA+  ++    ++  KPV+QV DLR ++TQ++   +ERYR+ LSDG+H++Q ML
Sbjct: 2    AVRLTEGAVLKMTAEDADQSFKPVLQVTDLRQIHTQRSGGDSERYRLNLSDGSHLEQGML 61

Query: 290  ATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPKMFDNGT 469
            A+Q N +V  G LQK SIV L EF C  +QNR III+++LDVLVS    IG+P    N  
Sbjct: 62   ASQHNSLVHQGLLQKGSIVCLTEFTCTKVQNRRIIIIVSLDVLVSECDIIGQPVRLSNA- 120

Query: 470  SLQNRASMPAQPSSVDQPAIAAANRQTYGLHSATPNIGQNVSGGASLHQQAEPRTNNPSF 649
              Q+ A++P    S++     A +          P +  N S G S   +AEP       
Sbjct: 121  --QSPATIPGNTQSLNSSVRGAGHEAMTEASPDQPRL--NPSYGGSYSGRAEP------- 169

Query: 650  GGNYGPVSSRNMNIENIEHPKVDHGTG---------------------------RLSESH 748
             G Y   SS    + N  HP+ + G+G                           + S +H
Sbjct: 170  -GRYAATSS----VPN--HPRPESGSGFAGSAPGSYAGQNTVLRSPRPQVSPPLQSSYAH 222

Query: 749  PYSGN-QNLRSNS-----TSVGVFRPPAISNVRPAQSVDRQPPPMYSNRGPLARNEAPAR 910
            P     Q  RSNS      S     PP+ S  R  Q   +QPPP+YSNRGP+A+NEAP R
Sbjct: 223  PPQPTYQQSRSNSYAQQPQSTYQQAPPS-SYARSPQPTHQQPPPLYSNRGPVAKNEAPGR 281

Query: 911  IIPIAALNPYQGRWTIKARVTTKGDLRRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNTIA 1090
            I+ I ALN YQ RWTIKARVT K +LR Y N RGEGKVF+FDL+DS  GEIRVTCFN +A
Sbjct: 282  IVQICALNMYQNRWTIKARVTAKSELRTYTNARGEGKVFNFDLIDS-SGEIRVTCFNPVA 340

Query: 1091 DQFFDQIEVGKVYLISKGSLKPAQKSFNHLNNEYEIFLESQSVIQPCLDEDPTI 1252
            ++F+  IEVGKVY ISKG++K A + FNHLNNE+EI L++ S IQ C ++D +I
Sbjct: 341  EEFYSLIEVGKVYRISKGTIKTAARKFNHLNNEFEIHLDATSTIQLCFEDDGSI 394


>ref|NP_199353.1| replication protein RPA70C [Arabidopsis thaliana]
            gi|75333866|sp|Q9FHJ6.1|RFA1C_ARATH RecName:
            Full=Replication protein A 70 kDa DNA-binding subunit C;
            Short=AtRPA70c; AltName: Full=AtRPA1-2; AltName:
            Full=Replication factor A protein 1C; AltName:
            Full=Replication protein A 1C; Short=AtRPA1C
            gi|9758730|dbj|BAB09168.1| replication protein A1-like
            [Arabidopsis thaliana] gi|332007861|gb|AED95244.1|
            replication factor-A protein 1-like protein [Arabidopsis
            thaliana]
          Length = 853

 Score =  296 bits (759), Expect = 9e-78
 Identities = 180/412 (43%), Positives = 234/412 (56%), Gaps = 37/412 (8%)
 Frame = +2

Query: 116  AVDLSRGAIAAISEGR--GEEGAKPVVQVWDLRLVNTQ----QTTTERYRMLLSDGTHMQ 277
            AV L+ G +  +  G    E    PV+QV +L+L+ ++    Q ++ RY+ LLSDGT + 
Sbjct: 2    AVSLTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDLA 61

Query: 278  QAMLATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPKMF 457
              ML T +N +V  G++Q  S+++L  +ICN+IQ R I++++ L+V+V   + IG PK  
Sbjct: 62   AGMLNTSLNSLVNQGTIQLGSVIRLTHYICNLIQTRRIVVIMQLEVIVEKCNIIGNPKEP 121

Query: 458  DNGTSLQNRASMPAQP---SSVDQPAIAAANRQTYGL--HSATPNIGQNVSGGA----SL 610
             + +    R  +  Q    S   Q   +  N   YG+  +S  P +  N S       S 
Sbjct: 122  GHSSINPQRGGVNTQSNGGSEQQQARRSDVNGGRYGVSANSPQPQVVHNSSDAGRYCVSA 181

Query: 611  HQQAEPRTNNPSFGGNYGPVSSRNMNIENIEHPKVDHGT-GRLSESHPYSGNQNLRSNST 787
            +       ++ S  G YG   S N     + H   D G  G+   S  Y         S 
Sbjct: 182  NSPQPQVVHSSSDAGRYGV--SANSPQRQVVHNSPDAGRYGQPQVSQRYGTGSGYPETSP 239

Query: 788  SVGVFRPPAISNV--------------------RPAQSVDR-QPPPMYSNRGPLARNEAP 904
            S    RP   SN                     RP QS  + Q PPMY NRGP+ARNEAP
Sbjct: 240  ST---RPYVSSNAGYGGSRQDQPRAPTATTAYSRPVQSAYQPQQPPMYVNRGPVARNEAP 296

Query: 905  ARIIPIAALNPYQGRWTIKARVTTKGDLRRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNT 1084
             RI PIAALNPYQGRWTIK RVT+K DLRR+NNPRGEGK+FSFDLLD+DGGEIRVTCFN 
Sbjct: 297  PRINPIAALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFND 356

Query: 1085 IADQFFDQIEVGKVYLISKGSLKPAQKSFNHLNNEYEIFLESQSVIQPCLDE 1240
              DQFFD+I VG VYLIS+G+LKPAQK+FNHL N+YEI L+S S IQPC D+
Sbjct: 357  AVDQFFDKIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPCEDD 408


>ref|XP_006281805.1| hypothetical protein CARUB_v10027980mg [Capsella rubella]
            gi|482550509|gb|EOA14703.1| hypothetical protein
            CARUB_v10027980mg [Capsella rubella]
          Length = 842

 Score =  296 bits (759), Expect = 9e-78
 Identities = 180/409 (44%), Positives = 242/409 (59%), Gaps = 34/409 (8%)
 Frame = +2

Query: 116  AVDLSRGAIAAISEGR--GEEGAKPVVQVWDLRLVNTQQTTTE---RYRMLLSDGTHMQQ 280
            AVDL+ GAI  +  G    E    PV+QV +L+L+ +++   E   RY++ LSDG   QQ
Sbjct: 2    AVDLTTGAINKMLNGEVASEADMTPVLQVTELKLIQSKRPNQEAINRYKVSLSDGILSQQ 61

Query: 281  AMLATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEPKMFD 460
             ML T +N +V SG++Q  SI+++ +F+CN+IQNR I+I+ NL+++V   + IG      
Sbjct: 62   GMLGTSLNVLVTSGNIQLGSILRVTQFVCNLIQNRRIVIISNLEIIVEKCNIIG------ 115

Query: 461  NGTSLQNRASMPAQPSSVDQPAIAAANRQTYGLHSATPNIGQNVSGG-----ASLHQQAE 625
             GT +Q  A MP +P           N Q+ G +        +++GG     A+L  Q +
Sbjct: 116  -GTHVQ--AGMPNEPGQQLGGGAGYVNTQSNGGYEQQQARRTDLNGGRYGVSANL-PQPQ 171

Query: 626  PRTNNPSFGGNYGPVSSRNMNIENIEHPKVDHGTGRLSESHP-------YSGNQNLRSNS 784
               NNP   G YG   S N+    + H   D G   +  + P       Y         S
Sbjct: 172  VVHNNPD-AGRYGV--SANLPQPRVVHNTSDAGRYGVPATSPQPQVSQRYGTGSGYPETS 228

Query: 785  TSVGVF----------------RPPAISNVRPAQSVDR-QPPPMYSNRGPLARNEAPARI 913
             S+  +                 P   +  RP QS  + Q PPMY NRGP+ARNEAP RI
Sbjct: 229  PSIRPYGSAIAGYGGSGLEQARAPATTAYSRPVQSAYQPQSPPMYVNRGPVARNEAPPRI 288

Query: 914  IPIAALNPYQGRWTIKARVTTKGDLRRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNTIAD 1093
             P+AALNPYQGRWTI+ RVT KG+LRR++NPRGEGK+F+FDLLDSDGGEIRVTCFN + D
Sbjct: 289  TPVAALNPYQGRWTIRVRVTCKGELRRFSNPRGEGKLFNFDLLDSDGGEIRVTCFNDVVD 348

Query: 1094 QFFDQIEVGKVYLISKGSLKPAQKSFNHLNNEYEIFLESQSVIQPCLDE 1240
            +FFDQI VG VYLIS+GSL+PAQK++NHL+N+YEI L+S S IQ C D+
Sbjct: 349  KFFDQIVVGNVYLISRGSLRPAQKNYNHLHNDYEIHLDSASTIQQCQDD 397


>ref|XP_002970633.1| hypothetical protein SELMODRAFT_441216 [Selaginella moellendorffii]
            gi|300162149|gb|EFJ28763.1| hypothetical protein
            SELMODRAFT_441216 [Selaginella moellendorffii]
          Length = 815

 Score =  293 bits (750), Expect = 1e-76
 Identities = 170/395 (43%), Positives = 237/395 (60%), Gaps = 18/395 (4%)
 Frame = +2

Query: 110  MAAVDLSRGAIAAISEGRGEEGAKPVVQVWDLRLVNTQQTTTERYRMLLSDGTHMQQAML 289
            MA   L+  AI A+  G  E   +P+VQV D++ + + Q   ERYR++LSDGT +QQAML
Sbjct: 1    MAQPSLTPNAIVALLGGDLE--LRPIVQVLDVKQIGSNQNVQERYRLVLSDGTAVQQAML 58

Query: 290  ATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSS--------NSAIGE 445
            ATQ+N +VK+G+L K SIV+L E+ICN +++R I+IV+NLDVLVS+         + +  
Sbjct: 59   ATQLNEVVKNGTLMKSSIVKLQEYICNTVKDRKIVIVLNLDVLVSNAEMSDQPPGAVVDP 118

Query: 446  PKMFDNGTS--LQNRASMPAQ-------PSSVDQPAIAAANRQTYGLHSATPNIGQNVSG 598
            P    N T+  + +    PA+       P+ V       A   ++G     P    ++ G
Sbjct: 119  PGPSGNQTASAVSSYGGRPAEVSSFGGRPTEVSSFGGRQAEATSFG---GRPTETNSLGG 175

Query: 599  GASLHQQAEPRTNNP-SFGGNYGPVSSRNMNIENIEHPKVDHGTGRLSESHPYSGNQNLR 775
             A+       RT  P SFGG   P  S          P    G    + S PY      R
Sbjct: 176  RAAEGSSIGGRTPEPGSFGGQATPAVSP---YGRPAEPGSFGGQATPAVS-PYGRPAEAR 231

Query: 776  SNSTSVGVFRPPAISNVRPAQSVDRQPPPMYSNRGPLARNEAPARIIPIAALNPYQGRWT 955
              + + G     +I +  P       PPP Y+NRGP+ARNE P  ++PIAALNPY GRWT
Sbjct: 232  RETVAYGGRPAESIGSYAPNPPYG--PPPTYTNRGPIARNEGPPGLVPIAALNPYHGRWT 289

Query: 956  IKARVTTKGDLRRYNNPRGEGKVFSFDLLDSDGGEIRVTCFNTIADQFFDQIEVGKVYLI 1135
            IKAR+T+K DLRR+NN RG+G+VFSFDLLD++GGEIRVTCFN +AD+F+++ +VG++Y++
Sbjct: 290  IKARITSKSDLRRFNNARGDGRVFSFDLLDAEGGEIRVTCFNNVADEFYERAQVGRLYMV 349

Query: 1136 SKGSLKPAQKSFNHLNNEYEIFLESQSVIQPCLDE 1240
            SKGSL+ AQK FNHL N++EI  E  SV+ PC ++
Sbjct: 350  SKGSLRAAQKQFNHLKNDWEIMFEKDSVLDPCPED 384


>ref|XP_006283088.1| hypothetical protein CARUB_v10004104mg [Capsella rubella]
            gi|482551793|gb|EOA15986.1| hypothetical protein
            CARUB_v10004104mg [Capsella rubella]
          Length = 879

 Score =  291 bits (746), Expect = 3e-76
 Identities = 181/430 (42%), Positives = 240/430 (55%), Gaps = 52/430 (12%)
 Frame = +2

Query: 119  VDLSRGAIAAISEGR--GEEGAKPVVQVWDLRLVNTQQTTT-ERYRMLLSDGTHMQQAML 289
            V L+ GAI  I  G    E    PV+QV ++R + +QQ    ER+RML+SDGT + Q ML
Sbjct: 3    VSLTAGAIGKIMSGEVTKEIDMMPVLQVTEVRQIKSQQEPVRERFRMLVSDGTQLHQGML 62

Query: 290  ATQMNGIVKSGSLQKHSIVQLNEFICNVIQNRTIIIVINLDVLVSSNSAIGEP------- 448
               +N +VKSG+LQ  SIV+L +F+CNVI++R I+I++ +DV+ +    IG P       
Sbjct: 63   GADLNHLVKSGTLQAGSIVRLTKFLCNVIKDRRIVIIMQVDVITTKADIIGHPVLGGKTN 122

Query: 449  -KMFDNGTSLQNRASMPAQPSSVDQPAIAAANRQTYGLHSA-TPNIGQNVSGGA-SLHQQ 619
             +   + ++  N      Q  S    +    N +T   ++A +P +G     GA S    
Sbjct: 123  DQRVADSSNKSNATGFEQQGRSEPIASCQINNTETGRSNAAISPEVGHRQGFGAGSSVPT 182

Query: 620  AEPRT---NNPSFGGNYGPVSSRNMNIENIEHPKVDHGTGRLSESH--PYSGNQNL---- 772
            + P T   NN   G +   +SS     +          +   + ++  P +G  N     
Sbjct: 183  STPSTWAYNNTETGRSNATISSEVGQRQGFSAGSSVPASAPSTRAYNTPETGRSNAAFSP 242

Query: 773  ---------RSNSTSVGVFRPPAISNVRPAQSVDRQ---------------------PPP 862
                       +S    V    A +N    Q V RQ                     PPP
Sbjct: 243  EVGQRQGFGAGSSVPASVPSTRAYNNPSAGQGVPRQDHARDPPTSYPPRQPAYQPQIPPP 302

Query: 863  MYSNRGPLARNEAPARIIPIAALNPYQGRWTIKARVTTKGDLRRYNNPRGEGKVFSFDLL 1042
            MY+NRGP+ARNEAP RIIPI AL+PY GRWTIKARVT K  LR+Y+NPRGEGKVFSFDLL
Sbjct: 303  MYANRGPMARNEAPPRIIPINALSPYSGRWTIKARVTNKAGLRQYSNPRGEGKVFSFDLL 362

Query: 1043 DSDGGEIRVTCFNTIADQFFDQIEVGKVYLISKGSLKPAQKSFNHLNNEYEIFLESQSVI 1222
            D+DGGEIRVTCFN +ADQFFDQI VG VYLIS+GSL+PAQK+FNHL N+YEI L++ S I
Sbjct: 363  DADGGEIRVTCFNAVADQFFDQIVVGNVYLISRGSLRPAQKNFNHLPNDYEIMLDNASTI 422

Query: 1223 QPCLDEDPTI 1252
            + C +ED  I
Sbjct: 423  KQCYEEDAVI 432