BLASTX nr result
ID: Zingiber23_contig00024232
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00024232
(461 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
gb|EMJ13198.1| hypothetical protein PRUPE_ppa011078mg [Prunus pe... 81 2e-13
emb|CBI30774.3| unnamed protein product [Vitis vinifera] 81 2e-13
ref|XP_006377256.1| hypothetical protein POPTR_0011s03060g [Popu... 80 2e-13
ref|XP_002316747.1| predicted protein [Populus trichocarpa] 80 2e-13
ref|XP_004294568.1| PREDICTED: pentatricopeptide repeat-containi... 79 8e-13
ref|XP_006467567.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_006355563.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_006449586.1| hypothetical protein CICLE_v10016169mg [Citr... 77 3e-12
ref|XP_004232997.1| PREDICTED: pentatricopeptide repeat-containi... 76 5e-12
gb|EXB58283.1| hypothetical protein L484_015617 [Morus notabilis] 74 2e-11
ref|XP_006658667.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
gb|EMS61377.1| hypothetical protein TRIUR3_30925 [Triticum urartu] 72 1e-10
dbj|BAJ85448.1| predicted protein [Hordeum vulgare subsp. vulgar... 72 1e-10
ref|XP_002526919.1| conserved hypothetical protein [Ricinus comm... 72 1e-10
dbj|BAC83317.1| pentatricopeptide (PPR) repeat-containing protei... 71 1e-10
ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
ref|NP_001059918.2| Os07g0545900 [Oryza sativa Japonica Group] g... 71 1e-10
gb|ACU23441.1| unknown [Glycine max] 71 1e-10
gb|ESW19954.1| hypothetical protein PHAVU_006G168700g [Phaseolus... 71 2e-10
>ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Cucumis sativus]
Length = 270
Score = 83.2 bits (204), Expect = 3e-14
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 301
MEELGV PD+DTV R+ RAF+ LGQ D R +++KRY C+W+Y+HFKGE VRVR
Sbjct: 209 MEELGVKPDEDTVRRVCRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVR 261
>gb|EMJ13198.1| hypothetical protein PRUPE_ppa011078mg [Prunus persica]
Length = 224
Score = 80.9 bits (198), Expect = 2e-13
Identities = 33/54 (61%), Positives = 45/54 (83%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRS 298
MEELGV PD+DTV R+ RAF+ LGQ + + L+ +RY+CKW+Y+HFKGE V+VR+
Sbjct: 160 MEELGVKPDEDTVRRVARAFKELGQEENKTLVLRRYQCKWKYIHFKGERVKVRT 213
>emb|CBI30774.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 80.9 bits (198), Expect = 2e-13
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 301
MEELGV PD+DTV R+ AF+ LGQ DK+ L+ K+Y+CKW+Y+HF GE VRVR
Sbjct: 217 MEELGVKPDEDTVRRVACAFQTLGQEDKQKLVLKKYQCKWKYIHFNGERVRVR 269
>ref|XP_006377256.1| hypothetical protein POPTR_0011s03060g [Populus trichocarpa]
gi|550327464|gb|ERP55053.1| hypothetical protein
POPTR_0011s03060g [Populus trichocarpa]
Length = 262
Score = 80.5 bits (197), Expect = 2e-13
Identities = 34/53 (64%), Positives = 44/53 (83%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 301
MEELGV PD+DTV R+ RAF+ LGQ +KR+L+ +RY CKW+Y+HF GE VRV+
Sbjct: 203 MEELGVRPDEDTVWRVARAFKKLGQEEKRELVLERYLCKWKYIHFNGERVRVK 255
>ref|XP_002316747.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 80.5 bits (197), Expect = 2e-13
Identities = 34/53 (64%), Positives = 44/53 (83%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 301
MEELGV PD+DTV R+ RAF+ LGQ +KR+L+ +RY CKW+Y+HF GE VRV+
Sbjct: 213 MEELGVRPDEDTVWRVARAFKKLGQEEKRELVLERYLCKWKYIHFNGERVRVK 265
>ref|XP_004294568.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 300
Score = 78.6 bits (192), Expect = 8e-13
Identities = 33/54 (61%), Positives = 42/54 (77%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRS 298
MEEL V PD+DTV R+ RAF+ GQ DK L+ +RY CKW+Y+HFKGE V+VR+
Sbjct: 236 MEELSVRPDEDTVRRVARAFQEFGQEDKSKLVLRRYGCKWKYIHFKGERVKVRT 289
>ref|XP_006467567.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Citrus sinensis]
Length = 281
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRSTETY 286
MEELGV PD+DTV RI AF+ +GQ+DK+ L+ K+Y KW+Y+HFKGE VRVR Y
Sbjct: 218 MEELGVRPDEDTVRRIASAFQRVGQDDKQKLVLKKYLSKWKYIHFKGERVRVRRDAWY 275
>ref|XP_006355563.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X1 [Solanum tuberosum]
gi|565378234|ref|XP_006355564.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X2 [Solanum tuberosum]
gi|565378236|ref|XP_006355565.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X3 [Solanum tuberosum]
Length = 265
Score = 78.2 bits (191), Expect = 1e-12
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 301
MEELGV PD+DTV R+ RAF++LGQ DK+ L+ K+Y+ +W+Y+HF GE RVR
Sbjct: 209 MEELGVKPDEDTVGRVARAFQMLGQEDKQKLVLKKYQSRWKYVHFNGERARVR 261
>ref|XP_006449586.1| hypothetical protein CICLE_v10016169mg [Citrus clementina]
gi|557552197|gb|ESR62826.1| hypothetical protein
CICLE_v10016169mg [Citrus clementina]
Length = 284
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/58 (58%), Positives = 44/58 (75%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRSTETY 286
MEELGV PD+DTV RI AF+ +GQ++K+ L+ K+Y KW+Y+HFKGE VRVR Y
Sbjct: 221 MEELGVRPDEDTVRRIASAFQRVGQDEKQKLVLKKYLSKWKYIHFKGERVRVRRDAWY 278
>ref|XP_004232997.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Solanum lycopersicum]
Length = 265
Score = 75.9 bits (185), Expect = 5e-12
Identities = 31/53 (58%), Positives = 42/53 (79%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 301
MEELGV PD+DTV R+ RAF++LGQ D + L+ K+Y+ +W+Y+HF GE RVR
Sbjct: 209 MEELGVKPDEDTVRRVARAFQMLGQEDNQKLVLKKYQSRWKYVHFNGERARVR 261
>gb|EXB58283.1| hypothetical protein L484_015617 [Morus notabilis]
Length = 326
Score = 74.3 bits (181), Expect = 2e-11
Identities = 31/53 (58%), Positives = 42/53 (79%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 301
MEEL V D+DTV R+ AF+ LGQ +K+ LL ++Y+CKW+Y+HFKGE +RVR
Sbjct: 262 MEELSVRLDEDTVRRVAYAFQKLGQEEKKKLLLRKYQCKWKYVHFKGERIRVR 314
>ref|XP_006658667.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like [Oryza brachyantha]
Length = 230
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/53 (62%), Positives = 39/53 (73%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 301
+EELGV PD+DT RIGRAF LGQ DK L+ K+Y KW+Y+HF GE RVR
Sbjct: 172 IEELGVHPDEDTTRRIGRAFAALGQEDKERLVLKKYLKKWKYIHFNGERARVR 224
>gb|EMS61377.1| hypothetical protein TRIUR3_30925 [Triticum urartu]
Length = 300
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/53 (60%), Positives = 39/53 (73%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 301
MEELGV PD+DT RIGRAF GQ DK+ + ++Y KW+Y+HF GE VRVR
Sbjct: 242 MEELGVRPDEDTTRRIGRAFATSGQEDKQKPVLEKYLKKWKYIHFNGERVRVR 294
>dbj|BAJ85448.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511571|dbj|BAJ91930.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326517433|dbj|BAK00083.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531618|dbj|BAJ97813.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 251
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/53 (60%), Positives = 39/53 (73%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 301
MEELGV PD+DT RIGRAF GQ DK+ + ++Y KW+Y+HF GE VRVR
Sbjct: 193 MEELGVRPDEDTTRRIGRAFATSGQEDKQKPVLEKYLKKWKYIHFNGERVRVR 245
>ref|XP_002526919.1| conserved hypothetical protein [Ricinus communis]
gi|223533738|gb|EEF35472.1| conserved hypothetical
protein [Ricinus communis]
Length = 224
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGE 316
MEELGV PD+DTV R+ RAF+ LGQ +K+ L+ KRY +W+Y+HFKGE
Sbjct: 166 MEELGVRPDEDTVRRVARAFKELGQEEKQKLVLKRYMSRWKYIHFKGE 213
>dbj|BAC83317.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|125600619|gb|EAZ40195.1| hypothetical protein
OsJ_24640 [Oryza sativa Japonica Group]
Length = 253
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 301
MEELGV PD+DT RIGRAF LGQ DK ++ ++Y K++Y+HF GE VRVR
Sbjct: 195 MEELGVHPDEDTTRRIGRAFVTLGQEDKEKIVLEKYLKKYKYMHFNGERVRVR 247
>ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X1 [Glycine max]
gi|571517206|ref|XP_006597502.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18975,
chloroplastic-like isoform X2 [Glycine max]
Length = 288
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/54 (57%), Positives = 40/54 (74%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRS 298
MEEL + PD+DTV R+ RAF LG +KR L+ K+Y KW+Y+HF GE VRVR+
Sbjct: 225 MEELRLKPDEDTVRRVARAFRELGDEEKRKLVIKQYGLKWKYIHFNGERVRVRT 278
>ref|NP_001059918.2| Os07g0545900 [Oryza sativa Japonica Group]
gi|255677866|dbj|BAF21832.2| Os07g0545900, partial
[Oryza sativa Japonica Group]
Length = 63
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVR 301
MEELGV PD+DT RIGRAF LGQ DK ++ ++Y K++Y+HF GE VRVR
Sbjct: 5 MEELGVHPDEDTTRRIGRAFVTLGQEDKEKIVLEKYLKKYKYMHFNGERVRVR 57
>gb|ACU23441.1| unknown [Glycine max]
Length = 288
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/54 (57%), Positives = 40/54 (74%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRS 298
MEEL + PD+DTV R+ RAF LG +KR L+ K+Y KW+Y+HF GE VRVR+
Sbjct: 225 MEELRLKPDEDTVRRVARAFRELGDEEKRKLVIKQYGLKWKYIHFNGERVRVRT 278
>gb|ESW19954.1| hypothetical protein PHAVU_006G168700g [Phaseolus vulgaris]
Length = 289
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = -3
Query: 459 MEELGVTPDDDTVSRIGRAFEILGQNDKRDLLFKRYKCKWRYLHFKGEHVRVRSTETY 286
MEEL V PD+DTV R+ RAF LG+ +KR L+ +RY KW+Y+HF E VRVR TE Y
Sbjct: 226 MEELRVKPDEDTVRRVARAFTELGEEEKRKLVARRYGIKWKYIHFNRERVRVR-TEAY 282