BLASTX nr result

ID: Zingiber23_contig00024213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00024213
         (352 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloropla...    58   1e-06
ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloropla...    57   2e-06
ref|XP_004969271.1| PREDICTED: peptide deformylase 1B, chloropla...    57   3e-06
gb|EOY02428.1| Polypeptide deformylase, putative isoform 5 [Theo...    57   3e-06
gb|EOY02424.1| Polypeptide deformylase, putative isoform 1 [Theo...    57   3e-06
gb|ESW24670.1| hypothetical protein PHAVU_004G149800g [Phaseolus...    56   4e-06
ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloropla...    56   4e-06
ref|XP_002458212.1| hypothetical protein SORBIDRAFT_03g029040 [S...    55   7e-06

>ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloroplastic-like isoform X1
           [Citrus sinensis] gi|568832146|ref|XP_006470304.1|
           PREDICTED: peptide deformylase 1B, chloroplastic-like
           isoform X2 [Citrus sinensis]
           gi|568832148|ref|XP_006470305.1| PREDICTED: peptide
           deformylase 1B, chloroplastic-like isoform X3 [Citrus
           sinensis]
          Length = 282

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/51 (54%), Positives = 39/51 (76%)
 Frame = +2

Query: 2   FDRMTEDILETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 154
           F+RMT+D+L++IR QL+ LEKKYE+ TGL+SPE I+   S +RK   GF +
Sbjct: 233 FERMTDDVLDSIREQLEALEKKYEDKTGLQSPEKIE--ASKRRKAAVGFGK 281


>ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cucumis
           sativus]
          Length = 273

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/51 (58%), Positives = 39/51 (76%)
 Frame = +2

Query: 2   FDRMTEDILETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 154
           FDRMT+++LETIR QL+ LEKKYE+ TGL SPE I+   + +RK  AGF +
Sbjct: 225 FDRMTDEVLETIRPQLQALEKKYEDRTGLPSPERIE---NFRRKVGAGFGK 272


>ref|XP_004969271.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Setaria
           italica]
          Length = 270

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/51 (56%), Positives = 38/51 (74%)
 Frame = +2

Query: 2   FDRMTEDILETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 154
           FDRMT D+LET+R +LK LEKKYE TTGL  PE++D N  G  K++  F++
Sbjct: 222 FDRMTMDVLETVRDELKNLEKKYEETTGLTVPETVD-NYKG-AKDVFSFSR 270


>gb|EOY02428.1| Polypeptide deformylase, putative isoform 5 [Theobroma cacao]
          Length = 279

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/51 (52%), Positives = 39/51 (76%)
 Frame = +2

Query: 2   FDRMTEDILETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 154
           FDRMT ++L++IR+QL+ LEKKYE+TTGL SPE ++     ++K  AGF +
Sbjct: 230 FDRMTGEVLDSIRAQLEALEKKYEDTTGLPSPEKVE--TQKRKKAAAGFGK 278


>gb|EOY02424.1| Polypeptide deformylase, putative isoform 1 [Theobroma cacao]
           gi|508710528|gb|EOY02425.1| Polypeptide deformylase,
           putative isoform 1 [Theobroma cacao]
           gi|508710529|gb|EOY02426.1| Polypeptide deformylase,
           putative isoform 1 [Theobroma cacao]
           gi|508710530|gb|EOY02427.1| Polypeptide deformylase,
           putative isoform 1 [Theobroma cacao]
          Length = 278

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/51 (52%), Positives = 39/51 (76%)
 Frame = +2

Query: 2   FDRMTEDILETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 154
           FDRMT ++L++IR+QL+ LEKKYE+TTGL SPE ++     ++K  AGF +
Sbjct: 229 FDRMTGEVLDSIRAQLEALEKKYEDTTGLPSPEKVE--TQKRKKAAAGFGK 277


>gb|ESW24670.1| hypothetical protein PHAVU_004G149800g [Phaseolus vulgaris]
           gi|561025986|gb|ESW24671.1| hypothetical protein
           PHAVU_004G149800g [Phaseolus vulgaris]
          Length = 260

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = +2

Query: 2   FDRMTEDILETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 154
           FDRM+ED+L++IR QL+ LE KYE  TGL SPE I+   S +RK   GF +
Sbjct: 212 FDRMSEDVLDSIRGQLQALENKYEGLTGLPSPEKIEN--SKKRKAAVGFGR 260


>ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 275

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/51 (54%), Positives = 35/51 (68%)
 Frame = +2

Query: 2   FDRMTEDILETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 154
           FDRMTE +LE+I  QL+ LEKKYE+ TGL SPE I+     + K  AGF +
Sbjct: 224 FDRMTEGVLESISEQLQALEKKYEDKTGLPSPERIESRKRMKLKAAAGFGK 274


>ref|XP_002458212.1| hypothetical protein SORBIDRAFT_03g029040 [Sorghum bicolor]
           gi|241930187|gb|EES03332.1| hypothetical protein
           SORBIDRAFT_03g029040 [Sorghum bicolor]
          Length = 264

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = +2

Query: 2   FDRMTEDILETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 154
           FDRMT D+LET+R +LK LEKKYE  TGL SPE+++ N  G  K++  F++
Sbjct: 216 FDRMTMDVLETVREELKNLEKKYEERTGLASPETVE-NYEG-AKDVFSFSR 264


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