BLASTX nr result
ID: Zingiber23_contig00023855
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00023855
(481 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB55739.1| Calmodulin-binding transcription activator 5 [Mor... 54 2e-12
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu... 50 3e-12
gb|AAT40504.2| Polyprotein, putative [Solanum demissum] 49 5e-12
emb|CCH50976.1| T4.15 [Malus x robusta] 50 1e-11
gb|AEJ72569.1| putative reverse transcriptase family member [Mal... 48 3e-11
ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596... 49 5e-11
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 49 1e-10
gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 46 1e-10
gb|EXB60461.1| hypothetical protein L484_014914 [Morus notabilis] 47 1e-10
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 46 2e-10
gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-... 45 2e-10
gb|EMT05937.1| GPI ethanolamine phosphate transferase 1 [Aegilop... 45 2e-10
gb|EMS57239.1| hypothetical protein TRIUR3_19949 [Triticum urartu] 45 2e-10
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac... 45 3e-10
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ... 46 7e-10
ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea ma... 45 7e-10
dbj|BAJ95890.1| predicted protein [Hordeum vulgare subsp. vulgare] 45 7e-10
gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis] 48 8e-10
gb|EMS60091.1| Retinoblastoma-related protein 1 [Triticum urartu] 44 1e-09
gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis] 49 1e-09
>gb|EXB55739.1| Calmodulin-binding transcription activator 5 [Morus notabilis]
Length = 1036
Score = 54.3 bits (129), Expect(2) = 2e-12
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
GVLCD K +K KEKFY+ V++ +LYG ECWV+ R Y
Sbjct: 294 GVLCDGKMPIKLKEKFYRIVIRPTMLYGSECWVIKRQY 331
Score = 43.1 bits (100), Expect(2) = 2e-12
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = -1
Query: 121 KIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGL 23
K+ V M L+WM GHTRM RIRNE I+ KVG+
Sbjct: 334 KMSVTEMRMLRWMSGHTRMDRIRNEVIRSKVGI 366
>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
Length = 213
Score = 49.7 bits (117), Expect(2) = 3e-12
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
GVLCD K LK K KFY+ VV+ +LYG ECW + A+
Sbjct: 70 GVLCDKKIPLKLKGKFYRVVVRPALLYGAECWPVKNAH 107
Score = 47.4 bits (111), Expect(2) = 3e-12
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGL 23
+ K+ VA M L+WMCGHTR +IRNE I+EKVG+
Sbjct: 108 VHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGV 142
>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
Length = 868
Score = 48.9 bits (115), Expect(2) = 5e-12
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
GVLCD K S K K KFY+ VV+ +LYG ECW + A+
Sbjct: 538 GVLCDKKISPKLKGKFYRVVVRPALLYGAECWPVKNAH 575
Score = 47.4 bits (111), Expect(2) = 5e-12
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGL 23
+ K+ VA M L+WMCGHTR +IRNE I+EKVG+
Sbjct: 576 VHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGV 610
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 49.7 bits (117), Expect(2) = 1e-11
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = -2
Query: 261 MR*KT*RGVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVM 139
M+ K+ GVLCD + LK K KFY+T ++ +LYG ECW +
Sbjct: 823 MKWKSASGVLCDRRMPLKLKGKFYRTAIRPAMLYGTECWAV 863
Score = 45.4 bits (106), Expect(2) = 1e-11
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGL 23
+ K+ VA M L+WMCGHTR +IRNE+I+ KVG+
Sbjct: 868 VHKMGVAEMRMLRWMCGHTRKDKIRNEDIRGKVGV 902
>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
Length = 212
Score = 47.8 bits (112), Expect(2) = 3e-11
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = -2
Query: 261 MR*KT*RGVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVM 139
M+ K+ GVLCD LK K KFY+T ++ +LYG ECW +
Sbjct: 49 MKWKSASGVLCDRCMPLKLKGKFYRTTIRPAMLYGTECWAV 89
Score = 45.8 bits (107), Expect(2) = 3e-11
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGLHLLREN 5
+ K+ VA M L+WMCGHTR +IRNE+I+ KVG+ + N
Sbjct: 94 VHKMGVAEMRMLRWMCGHTRKDKIRNEDIRGKVGVAEIEGN 134
>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
Length = 278
Score = 48.5 bits (114), Expect(2) = 5e-11
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = -1
Query: 136 SSVLRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGL 23
+S ++K+ VA M L+WMCGHTR +IRNE I+EKVG+
Sbjct: 160 NSHVQKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGV 197
Score = 44.3 bits (103), Expect(2) = 5e-11
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
GVLCD K + K KFY+ VV+ +LYG ECW + ++
Sbjct: 125 GVLCDKKIPPRLKGKFYRMVVRPALLYGAECWPVKNSH 162
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 48.5 bits (114), Expect(2) = 1e-10
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVM 139
GVLCD K +K K KFY+T V+ ILYG ECW +
Sbjct: 222 GVLCDAKVPIKLKGKFYRTAVRPTILYGTECWAV 255
Score = 43.1 bits (100), Expect(2) = 1e-10
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = -1
Query: 121 KIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGL 23
K+ VA M L+WMCG TR +IRNE I+E+VG+
Sbjct: 262 KVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGV 294
>gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 3154
Score = 45.8 bits (107), Expect(2) = 1e-10
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
G+LCD K K KFY+T V+ +LYGVECW R +
Sbjct: 2327 GILCDKKVPQKLNGKFYRTAVRPAMLYGVECWPTKRRH 2364
Score = 45.4 bits (106), Expect(2) = 1e-10
Identities = 18/40 (45%), Positives = 31/40 (77%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGLHLLRE 8
++++ VA M L+WMCGHTR R+RN++I+++VG+ + E
Sbjct: 2365 VQQLGVAEMRMLRWMCGHTRKDRVRNDDIRDRVGVAPIEE 2404
>gb|EXB60461.1| hypothetical protein L484_014914 [Morus notabilis]
Length = 714
Score = 46.6 bits (109), Expect(2) = 1e-10
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -2
Query: 237 VLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
VLCD K +K K KFY+TV+ +LYG ECW + R +
Sbjct: 455 VLCDSKMPIKLKGKFYRTVICPAMLYGSECWAIKRQH 491
Score = 44.7 bits (104), Expect(2) = 1e-10
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGL 23
+ K+ VA M L+WM GHTRM RIRNE I+ KVG+
Sbjct: 492 ISKMSVAEMRMLRWMSGHTRMDRIRNEVIRSKVGV 526
>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
distachyon]
Length = 567
Score = 45.8 bits (107), Expect(2) = 2e-10
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
G+LCD + K K KFY+T ++ ILYG ECW R +
Sbjct: 413 GILCDKRVPQKLKGKFYRTAIRPAILYGAECWPTKRRH 450
Score = 45.1 bits (105), Expect(2) = 2e-10
Identities = 18/40 (45%), Positives = 31/40 (77%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGLHLLRE 8
++++ VA M L+WMCGHTR R+RN++I+++VG+ + E
Sbjct: 451 VQQLGVAEMRMLRWMCGHTRRDRVRNDDIRDRVGVAPIAE 490
>gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 1
[Triticum urartu]
Length = 1028
Score = 45.4 bits (106), Expect(2) = 2e-10
Identities = 18/40 (45%), Positives = 31/40 (77%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGLHLLRE 8
++++ VA M L+WMCGHTR R+RN++I+++VG+ + E
Sbjct: 651 VQQLGVAEMRMLRWMCGHTRKDRVRNDDIRDRVGVAPIEE 690
Score = 45.1 bits (105), Expect(2) = 2e-10
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
G+LCD + K K KFY+T V+ +LYG ECW R +
Sbjct: 613 GILCDKRVPQKLKGKFYRTAVRPAMLYGAECWPTKRRH 650
>gb|EMT05937.1| GPI ethanolamine phosphate transferase 1 [Aegilops tauschii]
Length = 1013
Score = 45.4 bits (106), Expect(2) = 2e-10
Identities = 18/40 (45%), Positives = 31/40 (77%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGLHLLRE 8
++++ VA M L+WMCGHTR R+RN++I+++VG+ + E
Sbjct: 182 VQQLGVAEMRMLRWMCGHTRKDRVRNDDIRDRVGVAPIEE 221
Score = 45.1 bits (105), Expect(2) = 2e-10
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
G+LCD + K K KFY+T V+ +LYG ECW R +
Sbjct: 144 GILCDKRVPQKLKGKFYRTAVRPAMLYGAECWPTKRRH 181
>gb|EMS57239.1| hypothetical protein TRIUR3_19949 [Triticum urartu]
Length = 505
Score = 45.4 bits (106), Expect(2) = 2e-10
Identities = 18/40 (45%), Positives = 31/40 (77%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGLHLLRE 8
++++ VA M L+WMCGHTR R+RN++I+++VG+ + E
Sbjct: 165 VQQLGVAEMRMLRWMCGHTRKDRVRNDDIRDRVGVAPIEE 204
Score = 45.1 bits (105), Expect(2) = 2e-10
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
G+LCD + K K KFY+T V+ +LYG ECW R +
Sbjct: 127 GILCDKRVPQKLKGKFYRTAVRPAMLYGAECWPTKRRH 164
>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
Length = 1939
Score = 45.1 bits (105), Expect(2) = 3e-10
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECW 145
G +CD K LK K KFY+T ++ +LYG ECW
Sbjct: 1246 GFICDKKVPLKLKGKFYRTAIRPAMLYGTECW 1277
Score = 45.1 bits (105), Expect(2) = 3e-10
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = -1
Query: 121 KIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGL 23
K+ VA M L+WM GHTR+ +IRNE+I+E+VG+
Sbjct: 1286 KLSVAEMKMLRWMSGHTRLDKIRNEDIRERVGV 1318
>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like [Brachypodium distachyon]
Length = 307
Score = 45.8 bits (107), Expect(2) = 7e-10
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
G+LCD + K K KFY+T ++ ILYG ECW R +
Sbjct: 153 GILCDKRVPQKLKGKFYRTAIRPAILYGAECWPTKRRH 190
Score = 43.1 bits (100), Expect(2) = 7e-10
Identities = 17/40 (42%), Positives = 30/40 (75%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGLHLLRE 8
++++ VA M L+WMCGHTR +RN++I+++VG+ + E
Sbjct: 191 VQQLGVAEMRMLRWMCGHTRRDHVRNDDIRDRVGVAPIAE 230
>ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea mays]
gi|238014750|gb|ACR38410.1| unknown [Zea mays]
Length = 215
Score = 44.7 bits (104), Expect(2) = 7e-10
Identities = 18/40 (45%), Positives = 31/40 (77%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGLHLLRE 8
++++ VA M L+W+CGHTR R+RN++I+E+VG+ + E
Sbjct: 99 VQQLCVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEE 138
Score = 44.3 bits (103), Expect(2) = 7e-10
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
GVLCD + K K KFY+T ++ +LYG ECW R +
Sbjct: 61 GVLCDPRVPHKLKGKFYRTAIRPAMLYGAECWPTKRRH 98
>dbj|BAJ95890.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 44.7 bits (104), Expect(2) = 7e-10
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
GVLCD + K K +FY+T ++ ILYG ECW R +
Sbjct: 82 GVLCDKRVLQKLKGRFYRTAIRPAILYGAECWPTKRRH 119
Score = 44.3 bits (103), Expect(2) = 7e-10
Identities = 17/40 (42%), Positives = 31/40 (77%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGLHLLRE 8
++++ VA M L+W+CGHTR R+RN++I+E++G+ + E
Sbjct: 120 IQQLGVAEMRMLRWICGHTRKDRVRNDDIRERLGVAPIEE 159
>gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]
Length = 1413
Score = 48.1 bits (113), Expect(2) = 8e-10
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
GVLCD K +K K KFY+TV++ +LYG +CW + R +
Sbjct: 943 GVLCDAKMLIKLKLKFYRTVIRPAMLYGSKCWAIKRQH 980
Score = 40.4 bits (93), Expect(2) = 8e-10
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGL 23
+ K+ VA M L+WM G TRM RI+NE I+ KVG+
Sbjct: 981 ISKMSVAEMRMLRWMSGQTRMDRIKNEVIRSKVGV 1015
>gb|EMS60091.1| Retinoblastoma-related protein 1 [Triticum urartu]
Length = 747
Score = 44.3 bits (103), Expect(2) = 1e-09
Identities = 18/40 (45%), Positives = 31/40 (77%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGLHLLRE 8
++++ VA M L+WMCGHTR R+RN++I+++VG+ + E
Sbjct: 217 VQQLGVAEMRVLRWMCGHTRKDRVRNDDIRDRVGVAPIAE 256
Score = 43.9 bits (102), Expect(2) = 1e-09
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAY 127
G+LCD + K K KFY+ V+ +LYG ECW+ R +
Sbjct: 179 GILCDKRVPQKLKGKFYRMTVRPAMLYGAECWLTKRRH 216
>gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis]
Length = 670
Score = 48.9 bits (115), Expect(2) = 1e-09
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = -2
Query: 240 GVLCDHKRSLKFKEKFYKTVVKHVILYGVECWVMTRAYCVR 118
GVLCD + +K K KFY+TV++ +LYG ECW + R + +
Sbjct: 506 GVLCDVEMPIKLKGKFYRTVIRPAMLYGSECWAIKRQHIAK 546
Score = 39.3 bits (90), Expect(2) = 1e-09
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = -1
Query: 127 LRKIRVA*MSRLKWMCGHTRMYRIRNENIKEKVGL 23
+ K+ V M L+WM GHTRM RIRNE I KVG+
Sbjct: 544 IAKMSVIEMRMLRWMSGHTRMDRIRNEVICCKVGV 578