BLASTX nr result

ID: Zingiber23_contig00023324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00023324
         (593 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW82289.1| putative RING zinc finger domain superfamily prot...    67   3e-09
ref|XP_002439942.1| hypothetical protein SORBIDRAFT_09g023070 [S...    67   5e-09
ref|XP_004961782.1| PREDICTED: uncharacterized protein LOC101757...    63   5e-08
ref|XP_006655398.1| PREDICTED: uncharacterized protein LOC102717...    60   3e-07
gb|AFW78330.1| putative RING/U-box superfamily protein [Zea mays]      59   7e-07
gb|ACN33488.1| unknown [Zea mays]                                      59   7e-07
ref|NP_001147524.1| zinc finger, C3HC4 type family protein [Zea ...    59   7e-07
gb|EEC79384.1| hypothetical protein OsI_20296 [Oryza sativa Indi...    59   1e-06
ref|NP_001055809.1| Os05g0470700 [Oryza sativa Japonica Group] g...    59   1e-06
ref|NP_001172635.1| Os01g0830200 [Oryza sativa Japonica Group] g...    58   2e-06
gb|ABR25529.1| zinc finger c3 ch4 type [Oryza sativa Indica Group]     58   2e-06
ref|XP_006644948.1| PREDICTED: uncharacterized protein LOC102716...    57   4e-06

>gb|AFW82289.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 550

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 43/96 (44%), Positives = 51/96 (53%)
 Frame = -3

Query: 570 RLNRNDGNGASTSVDPPTTEALTSRPLAEVALSADQVSASSTMAVIQGDVVTSEAPAEPQ 391
           R+ R    GASTS +PP  E +    +A +AL+ADQ S SSTMAVIQ D   +E+  EP 
Sbjct: 456 RIARPSHYGASTSSNPPNPEPIDGTHIA-MALAADQASNSSTMAVIQEDAAFAESAGEPS 514

Query: 390 XXXXXXXXXXXXXXXXXXSYDVDGGTLHSFKRRRLN 283
                             S DVDGG LH  KRRRLN
Sbjct: 515 NAGSSRSLRRRRGSGALGSLDVDGGDLHQNKRRRLN 550


>ref|XP_002439942.1| hypothetical protein SORBIDRAFT_09g023070 [Sorghum bicolor]
           gi|241945227|gb|EES18372.1| hypothetical protein
           SORBIDRAFT_09g023070 [Sorghum bicolor]
          Length = 551

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 43/96 (44%), Positives = 50/96 (52%)
 Frame = -3

Query: 570 RLNRNDGNGASTSVDPPTTEALTSRPLAEVALSADQVSASSTMAVIQGDVVTSEAPAEPQ 391
           R+ R    GASTS +PP  E +    +A  AL+ADQ S SSTMAVIQ D   +E+  EP 
Sbjct: 457 RIARPSPYGASTSSNPPNPEPVDGTHIAS-ALAADQASNSSTMAVIQEDAAFTESAGEPS 515

Query: 390 XXXXXXXXXXXXXXXXXXSYDVDGGTLHSFKRRRLN 283
                             S DVDGG LH  KRRRLN
Sbjct: 516 NAGSSRSLRRRRGSDALGSLDVDGGDLHQNKRRRLN 551


>ref|XP_004961782.1| PREDICTED: uncharacterized protein LOC101757151 [Setaria italica]
          Length = 553

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 41/96 (42%), Positives = 48/96 (50%)
 Frame = -3

Query: 570 RLNRNDGNGASTSVDPPTTEALTSRPLAEVALSADQVSASSTMAVIQGDVVTSEAPAEPQ 391
           R+ R    GASTS +PP  E +    +    L+ADQ S SSTMAVIQ D   +E+  EP 
Sbjct: 459 RIVRPSHYGASTSSNPPNPEPVDGTHIV-TGLAADQASNSSTMAVIQEDAAFTESAGEPS 517

Query: 390 XXXXXXXXXXXXXXXXXXSYDVDGGTLHSFKRRRLN 283
                             S DVDGG LH  KRRRLN
Sbjct: 518 NAGSSRSLRRRRGGDALGSLDVDGGDLHQNKRRRLN 553


>ref|XP_006655398.1| PREDICTED: uncharacterized protein LOC102717994 [Oryza brachyantha]
          Length = 514

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 40/96 (41%), Positives = 46/96 (47%)
 Frame = -3

Query: 570 RLNRNDGNGASTSVDPPTTEALTSRPLAEVALSADQVSASSTMAVIQGDVVTSEAPAEPQ 391
           R+ R    GASTS +P   +          AL+ADQ S SSTMAVIQ D   +E+  EP 
Sbjct: 419 RIVRPSQYGASTSSNPSNPDLPIDGSHVAAALAADQASNSSTMAVIQEDAAFTESTGEPS 478

Query: 390 XXXXXXXXXXXXXXXXXXSYDVDGGTLHSFKRRRLN 283
                             S DVDGG LH  KRRRLN
Sbjct: 479 NAGSSRSLRRRGRNDALGSLDVDGGGLHRNKRRRLN 514


>gb|AFW78330.1| putative RING/U-box superfamily protein [Zea mays]
          Length = 550

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 42/96 (43%), Positives = 48/96 (50%)
 Frame = -3

Query: 570 RLNRNDGNGASTSVDPPTTEALTSRPLAEVALSADQVSASSTMAVIQGDVVTSEAPAEPQ 391
           R+ R    GASTS +PP  E      +A  AL+ADQ S SSTMAVIQ D   + +  EP 
Sbjct: 457 RIARASPYGASTSSNPPNPEPFGETQIA-TALAADQASNSSTMAVIQEDAAFTGSAGEPS 515

Query: 390 XXXXXXXXXXXXXXXXXXSYDVDGGTLHSFKRRRLN 283
                             S DVDGG LH  KRRRLN
Sbjct: 516 -NAGSSRPLRRRGSDALGSLDVDGGDLHQNKRRRLN 550


>gb|ACN33488.1| unknown [Zea mays]
          Length = 550

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 42/96 (43%), Positives = 48/96 (50%)
 Frame = -3

Query: 570 RLNRNDGNGASTSVDPPTTEALTSRPLAEVALSADQVSASSTMAVIQGDVVTSEAPAEPQ 391
           R+ R    GASTS +PP  E      +A  AL+ADQ S SSTMAVIQ D   + +  EP 
Sbjct: 457 RIARASPYGASTSSNPPNPEPFGETQIA-TALAADQASNSSTMAVIQEDAAFTGSAGEPS 515

Query: 390 XXXXXXXXXXXXXXXXXXSYDVDGGTLHSFKRRRLN 283
                             S DVDGG LH  KRRRLN
Sbjct: 516 -NAGSSRPLRRRGSDALGSLDVDGGDLHQNKRRRLN 550


>ref|NP_001147524.1| zinc finger, C3HC4 type family protein [Zea mays]
           gi|195611986|gb|ACG27823.1| zinc finger, C3HC4 type
           family protein [Zea mays]
          Length = 550

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 42/96 (43%), Positives = 48/96 (50%)
 Frame = -3

Query: 570 RLNRNDGNGASTSVDPPTTEALTSRPLAEVALSADQVSASSTMAVIQGDVVTSEAPAEPQ 391
           R+ R    GASTS +PP  E      +A  AL+ADQ S SSTMAVIQ D   + +  EP 
Sbjct: 457 RIARASPYGASTSSNPPNPEPFGETQIA-TALAADQASNSSTMAVIQEDAAFTGSAGEPS 515

Query: 390 XXXXXXXXXXXXXXXXXXSYDVDGGTLHSFKRRRLN 283
                             S DVDGG LH  KRRRLN
Sbjct: 516 -NAGSSRPLRRRGSDALGSLDVDGGDLHQNKRRRLN 550


>gb|EEC79384.1| hypothetical protein OsI_20296 [Oryza sativa Indica Group]
          Length = 336

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 42/100 (42%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
 Frame = -3

Query: 570 RLNRNDGNGASTSVDPPTTEALTSRPL----AEVALSADQVSASSTMAVIQGDVVTSEAP 403
           R+ R    GASTS +PP        P+      VAL+ADQ S SSTMAVIQ D   +E+ 
Sbjct: 237 RMVRPSPYGASTSSNPPNPPNTELLPVDGNHVAVALAADQASNSSTMAVIQEDAAFTEST 296

Query: 402 AEPQXXXXXXXXXXXXXXXXXXSYDVDGGTLHSFKRRRLN 283
            EP                   S DVDG  LH  KRRRLN
Sbjct: 297 GEPSNAGSSRSLRRRGRNDALGSLDVDGVGLHRNKRRRLN 336


>ref|NP_001055809.1| Os05g0470700 [Oryza sativa Japonica Group]
           gi|113579360|dbj|BAF17723.1| Os05g0470700 [Oryza sativa
           Japonica Group] gi|215769483|dbj|BAH01712.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222631919|gb|EEE64051.1| hypothetical protein
           OsJ_18880 [Oryza sativa Japonica Group]
          Length = 562

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 42/100 (42%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
 Frame = -3

Query: 570 RLNRNDGNGASTSVDPPTTEALTSRPL----AEVALSADQVSASSTMAVIQGDVVTSEAP 403
           R+ R    GASTS +PP        P+      VAL+ADQ S SSTMAVIQ D   +E+ 
Sbjct: 463 RMVRPSPYGASTSSNPPNPPNTELLPVDGNHVAVALAADQASNSSTMAVIQEDAAFTEST 522

Query: 402 AEPQXXXXXXXXXXXXXXXXXXSYDVDGGTLHSFKRRRLN 283
            EP                   S DVDG  LH  KRRRLN
Sbjct: 523 GEPSNAGSSRSLRRRGRNDALGSLDVDGVGLHRNKRRRLN 562


>ref|NP_001172635.1| Os01g0830200 [Oryza sativa Japonica Group]
           gi|56202103|dbj|BAD73632.1| putative ring finger protein
           5 [Oryza sativa Japonica Group]
           gi|56785168|dbj|BAD81844.1| putative ring finger protein
           5 [Oryza sativa Japonica Group]
           gi|215697377|dbj|BAG91371.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215704669|dbj|BAG94297.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218189311|gb|EEC71738.1| hypothetical protein
           OsI_04298 [Oryza sativa Indica Group]
           gi|222619487|gb|EEE55619.1| hypothetical protein
           OsJ_03954 [Oryza sativa Japonica Group]
           gi|255673841|dbj|BAH91365.1| Os01g0830200 [Oryza sativa
           Japonica Group]
          Length = 561

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/103 (37%), Positives = 48/103 (46%)
 Frame = -3

Query: 591 DFERVVGRLNRNDGNGASTSVDPPTTEALTSRPLAEVALSADQVSASSTMAVIQGDVVTS 412
           DF R+ G    +    +++S +PP  E+   R     A SADQ S SST AVIQGD   S
Sbjct: 462 DFRRITGP---SQYGASASSSNPPNLESTFDRTHVVAAPSADQASNSSTAAVIQGDAGIS 518

Query: 411 EAPAEPQXXXXXXXXXXXXXXXXXXSYDVDGGTLHSFKRRRLN 283
           E+  EP                   S D DGG L   KRRR+N
Sbjct: 519 ESAGEPSNAGSSRSLRRRGRSSALGSLDADGGGLQRNKRRRIN 561


>gb|ABR25529.1| zinc finger c3 ch4 type [Oryza sativa Indica Group]
          Length = 162

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/103 (37%), Positives = 48/103 (46%)
 Frame = -3

Query: 591 DFERVVGRLNRNDGNGASTSVDPPTTEALTSRPLAEVALSADQVSASSTMAVIQGDVVTS 412
           DF R+ G    +    +++S +PP  E+   R     A SADQ S SST AVIQGD   S
Sbjct: 63  DFRRITGP---SQYGASASSSNPPNLESTFDRTHVVAAPSADQASNSSTAAVIQGDAGIS 119

Query: 411 EAPAEPQXXXXXXXXXXXXXXXXXXSYDVDGGTLHSFKRRRLN 283
           E+  EP                   S D DGG L   KRRR+N
Sbjct: 120 ESAGEPSNAGSSRSLRRRGRSSALGSLDADGGGLQRNKRRRIN 162


>ref|XP_006644948.1| PREDICTED: uncharacterized protein LOC102716267 [Oryza brachyantha]
          Length = 559

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 41/103 (39%), Positives = 48/103 (46%)
 Frame = -3

Query: 591 DFERVVGRLNRNDGNGASTSVDPPTTEALTSRPLAEVALSADQVSASSTMAVIQGDVVTS 412
           DF R+ G  +   G  AS+S +PP   +   R     A SADQ S SST AVIQGD   S
Sbjct: 460 DFRRITG--SSQYGASASSS-NPPNPNSTFDRTHVVAAPSADQASNSSTAAVIQGDAGIS 516

Query: 411 EAPAEPQXXXXXXXXXXXXXXXXXXSYDVDGGTLHSFKRRRLN 283
           E+  EP                   S D DGG L   KRRR+N
Sbjct: 517 ESAGEPSNVGSSRSLRRRGRSSALGSLDADGGGLQRNKRRRIN 559


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