BLASTX nr result

ID: Zingiber23_contig00023270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00023270
         (493 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS49582.1| hypothetical protein TRIUR3_12761 [Triticum urartu]    104   1e-20
ref|XP_003562777.1| PREDICTED: RING finger protein 170-like [Bra...   104   1e-20
ref|NP_001051839.1| Os03g0839000 [Oryza sativa Japonica Group] g...   102   5e-20
gb|EEC76490.1| hypothetical protein OsI_14243 [Oryza sativa Indi...   102   7e-20
ref|XP_004981118.1| PREDICTED: E3 ubiquitin-protein ligase RNF17...   100   3e-19
ref|XP_002463559.1| hypothetical protein SORBIDRAFT_01g001920 [S...   100   3e-19
ref|XP_006650873.1| PREDICTED: E3 ubiquitin-protein ligase RNF17...   100   3e-19
ref|XP_006856731.1| hypothetical protein AMTR_s00054p00206420 [A...   100   3e-19
tpg|DAA52399.1| TPA: protein binding protein [Zea mays]                99   4e-19
gb|ACG32881.1| protein binding protein [Zea mays]                      99   4e-19
ref|XP_006473244.1| PREDICTED: E3 ubiquitin-protein ligase RNF17...    96   5e-18
gb|ADE75637.1| unknown [Picea sitchensis]                              95   8e-18
gb|AFK34661.1| unknown [Lotus japonicus]                               94   1e-17
ref|XP_002325966.1| zinc finger family protein [Populus trichoca...    94   1e-17
gb|ADV02777.1| C3HC4-type zinc RING finger family protein [Ipomo...    93   3e-17
ref|NP_564172.1| C3HC4-type RING finger protein [Arabidopsis tha...    93   4e-17
ref|NP_001185064.1| C3HC4-type RING finger protein [Arabidopsis ...    93   4e-17
ref|XP_002264470.1| PREDICTED: RING finger protein 170 [Vitis vi...    93   4e-17
gb|AAM63145.1| unknown [Arabidopsis thaliana]                          93   4e-17
gb|AAF18527.1|AC006551_13 Hypothetical protein [Arabidopsis thal...    93   4e-17

>gb|EMS49582.1| hypothetical protein TRIUR3_12761 [Triticum urartu]
          Length = 158

 Score =  104 bits (259), Expect = 1e-20
 Identities = 52/78 (66%), Positives = 58/78 (74%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRL RE MDPQR LP VFRAR  L V+LS  YV SP DIL E + G  GF DDFL+LV+V
Sbjct: 80  RRLFRELMDPQRTLPLVFRARMILMVILSGVYVLSPVDILPESVLGLFGFFDDFLILVIV 139

Query: 312 FIHLANMYRGLLLNRHGG 259
           F+HLA +YR LLL RHGG
Sbjct: 140 FLHLAAVYRSLLLYRHGG 157


>ref|XP_003562777.1| PREDICTED: RING finger protein 170-like [Brachypodium distachyon]
          Length = 197

 Score =  104 bits (259), Expect = 1e-20
 Identities = 52/78 (66%), Positives = 57/78 (73%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRL RE MDPQR LP VFRAR  L V LS  YV SP DIL E + G  GF DDFL+LV+V
Sbjct: 119 RRLFRELMDPQRTLPLVFRARMILMVALSAVYVLSPVDILPESVLGLFGFFDDFLILVIV 178

Query: 312 FIHLANMYRGLLLNRHGG 259
           F+HLA +YR LLL RHGG
Sbjct: 179 FLHLAAVYRSLLLYRHGG 196


>ref|NP_001051839.1| Os03g0839000 [Oryza sativa Japonica Group]
           gi|28376707|gb|AAO41137.1| unknown protein [Oryza sativa
           Japonica Group] gi|108711996|gb|ABF99791.1| zinc finger
           family protein, putative, expressed [Oryza sativa
           Japonica Group] gi|113550310|dbj|BAF13753.1|
           Os03g0839000 [Oryza sativa Japonica Group]
           gi|215687212|dbj|BAG91777.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222626133|gb|EEE60265.1| hypothetical protein
           OsJ_13296 [Oryza sativa Japonica Group]
          Length = 191

 Score =  102 bits (254), Expect = 5e-20
 Identities = 50/78 (64%), Positives = 57/78 (73%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRL RE +DPQR LP VFRAR  + V LS  YV SP DIL E + G  GF DDFLVL++V
Sbjct: 113 RRLFRELLDPQRTLPLVFRARMVMMVALSAIYVLSPIDILPENVLGLFGFFDDFLVLLIV 172

Query: 312 FIHLANMYRGLLLNRHGG 259
           F+HLA +YR LLL RHGG
Sbjct: 173 FLHLAAVYRSLLLYRHGG 190


>gb|EEC76490.1| hypothetical protein OsI_14243 [Oryza sativa Indica Group]
          Length = 191

 Score =  102 bits (253), Expect = 7e-20
 Identities = 50/78 (64%), Positives = 57/78 (73%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRL RE +DPQR LP VFRAR  + V LS  YV SP DIL E + G  GF DDFLVL++V
Sbjct: 113 RRLFRELLDPQRTLPLVFRARMVMMVALSAIYVLSPVDILPENVLGLFGFFDDFLVLLIV 172

Query: 312 FIHLANMYRGLLLNRHGG 259
           F+HLA +YR LLL RHGG
Sbjct: 173 FLHLAAVYRSLLLYRHGG 190


>ref|XP_004981118.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Setaria
           italica]
          Length = 191

 Score =  100 bits (248), Expect = 3e-19
 Identities = 49/78 (62%), Positives = 57/78 (73%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRL RE +DPQR LP VFRAR  + V LS  YV SP DIL E + G  GF+DD L+LV+V
Sbjct: 113 RRLFRELLDPQRTLPLVFRARMMMMVALSAIYVLSPVDILPESVLGLFGFVDDLLILVIV 172

Query: 312 FIHLANMYRGLLLNRHGG 259
           F+HLA +YR LLL RHGG
Sbjct: 173 FLHLAAVYRSLLLYRHGG 190


>ref|XP_002463559.1| hypothetical protein SORBIDRAFT_01g001920 [Sorghum bicolor]
           gi|241917413|gb|EER90557.1| hypothetical protein
           SORBIDRAFT_01g001920 [Sorghum bicolor]
          Length = 191

 Score =  100 bits (248), Expect = 3e-19
 Identities = 49/78 (62%), Positives = 58/78 (74%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRL RE MDPQR LP VFRAR  + V LS  YV SP DIL E + G +GF+DD L+L++V
Sbjct: 113 RRLFRELMDPQRTLPLVFRARMMMMVALSAIYVLSPVDILPESMLGLLGFVDDLLILLIV 172

Query: 312 FIHLANMYRGLLLNRHGG 259
           F+HLA +YR LLL RHGG
Sbjct: 173 FLHLAAVYRSLLLYRHGG 190


>ref|XP_006650873.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Oryza
           brachyantha]
          Length = 191

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/78 (61%), Positives = 57/78 (73%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RR+ RE +DPQR LP VFRAR  L V LS  Y+ SP DIL E + G  G+ DDFLVL++V
Sbjct: 113 RRMFRELLDPQRTLPLVFRARMILMVALSAIYILSPVDILPESVLGLCGYFDDFLVLLIV 172

Query: 312 FIHLANMYRGLLLNRHGG 259
           F+HLA +YR LLL RHGG
Sbjct: 173 FLHLAAVYRSLLLYRHGG 190


>ref|XP_006856731.1| hypothetical protein AMTR_s00054p00206420 [Amborella trichopoda]
           gi|548860631|gb|ERN18198.1| hypothetical protein
           AMTR_s00054p00206420 [Amborella trichopoda]
          Length = 187

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/79 (60%), Positives = 60/79 (75%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRLLRE MDPQR+LP VFRAR  +S+ +S+ YV SP DIL E I G +G LDD L++++V
Sbjct: 108 RRLLRELMDPQRSLPLVFRARIFISMFVSVLYVLSPIDILPEAILGVIGLLDDALIVLVV 167

Query: 312 FIHLANMYRGLLLNRHGGA 256
            +HLA MYR  LL RHGG+
Sbjct: 168 LLHLAAMYRSALLYRHGGS 186


>tpg|DAA52399.1| TPA: protein binding protein [Zea mays]
          Length = 196

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 49/78 (62%), Positives = 57/78 (73%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRL RE MDPQR LP VFRAR  + V LS  YV SP DIL E + G  GF+DD L+L++V
Sbjct: 118 RRLFRELMDPQRTLPLVFRARMLMMVALSAIYVLSPVDILPESMLGLFGFVDDLLILLIV 177

Query: 312 FIHLANMYRGLLLNRHGG 259
           F+HLA +YR LLL RHGG
Sbjct: 178 FLHLAAVYRSLLLYRHGG 195


>gb|ACG32881.1| protein binding protein [Zea mays]
          Length = 196

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 49/78 (62%), Positives = 57/78 (73%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRL RE MDPQR LP VFRAR  + V LS  YV SP DIL E + G  GF+DD L+L++V
Sbjct: 118 RRLFRELMDPQRTLPLVFRARMLMMVALSAIYVLSPVDILPESMLGLFGFVDDLLILLIV 177

Query: 312 FIHLANMYRGLLLNRHGG 259
           F+HLA +YR LLL RHGG
Sbjct: 178 FLHLAAVYRSLLLYRHGG 195


>ref|XP_006473244.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Citrus
           sinensis]
          Length = 187

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 42/79 (53%), Positives = 59/79 (74%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRL+RE +DP+R+LP V RAR  ++++LS  Y+ SP DI+ E + G VG LDD L+ +M 
Sbjct: 109 RRLVRELVDPRRSLPLVIRARVYIAMILSAAYIFSPIDIIPEAVLGIVGLLDDLLIALMC 168

Query: 312 FIHLANMYRGLLLNRHGGA 256
           F+H+A +YR +L NRHGGA
Sbjct: 169 FLHVAALYRAVLYNRHGGA 187


>gb|ADE75637.1| unknown [Picea sitchensis]
          Length = 266

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 48/78 (61%), Positives = 55/78 (70%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRLLRE MDPQRALP VFRAR    + L   YV SP DIL E I G VG LDD LV+++V
Sbjct: 187 RRLLRELMDPQRALPLVFRARIVCFLALLAIYVFSPVDILPEGILGIVGLLDDLLVVLVV 246

Query: 312 FIHLANMYRGLLLNRHGG 259
           F H+A +YR  L +RHGG
Sbjct: 247 FFHVATLYRSALFSRHGG 264


>gb|AFK34661.1| unknown [Lotus japonicus]
          Length = 188

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 42/79 (53%), Positives = 60/79 (75%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRL REF+DPQR+LP V RAR  +++++S  YV SP DI+ E I+G VG LDD L++++ 
Sbjct: 110 RRLAREFLDPQRSLPLVIRARVYIAMIISAIYVFSPIDIIPEGIWGVVGLLDDLLIMLIF 169

Query: 312 FIHLANMYRGLLLNRHGGA 256
           F+H+A +YR +L  RHGG+
Sbjct: 170 FLHVAALYRSVLYRRHGGS 188


>ref|XP_002325966.1| zinc finger family protein [Populus trichocarpa]
           gi|222862841|gb|EEF00348.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 185

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 46/79 (58%), Positives = 59/79 (74%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRLLRE MDPQR+LP V RAR  ++V+LS  YV SP DI+ E I G VG LDD LV+++ 
Sbjct: 107 RRLLREIMDPQRSLPLVIRARVYIAVVLSAIYVISPIDIIPEGILGIVGLLDDLLVVLIC 166

Query: 312 FIHLANMYRGLLLNRHGGA 256
           F+H+A +YR +L  RHGG+
Sbjct: 167 FLHVAAIYRAVLHYRHGGS 185


>gb|ADV02777.1| C3HC4-type zinc RING finger family protein [Ipomoea batatas]
          Length = 186

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 43/77 (55%), Positives = 56/77 (72%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRLLRE  DPQR+LPFV RAR  L+  LS+ YV SP DI+ E   G +GFLDD +++ + 
Sbjct: 107 RRLLREITDPQRSLPFVIRARVYLAAFLSVLYVLSPIDIIPEGFLGIIGFLDDLIIVFIC 166

Query: 312 FIHLANMYRGLLLNRHG 262
           F+H+A +YR LL+ RHG
Sbjct: 167 FLHVAALYRSLLVFRHG 183


>ref|NP_564172.1| C3HC4-type RING finger protein [Arabidopsis thaliana]
           gi|110740529|dbj|BAE98370.1| hypothetical protein
           [Arabidopsis thaliana] gi|332192128|gb|AEE30249.1|
           C3HC4-type RING finger protein [Arabidopsis thaliana]
          Length = 185

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 41/79 (51%), Positives = 58/79 (73%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRLLRE MDPQR LP V RAR  ++++LS  Y+ SP DI+ E + G +G LDD L+ ++ 
Sbjct: 107 RRLLREMMDPQRTLPLVIRARVYIALILSAIYIISPIDIIPEGVLGVIGLLDDLLIALIC 166

Query: 312 FIHLANMYRGLLLNRHGGA 256
           F+H+A +YR +L +RHGG+
Sbjct: 167 FLHVAALYRSVLYSRHGGS 185


>ref|NP_001185064.1| C3HC4-type RING finger protein [Arabidopsis thaliana]
           gi|332192129|gb|AEE30250.1| C3HC4-type RING finger
           protein [Arabidopsis thaliana]
          Length = 203

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 41/79 (51%), Positives = 58/79 (73%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRLLRE MDPQR LP V RAR  ++++LS  Y+ SP DI+ E + G +G LDD L+ ++ 
Sbjct: 125 RRLLREMMDPQRTLPLVIRARVYIALILSAIYIISPIDIIPEGVLGVIGLLDDLLIALIC 184

Query: 312 FIHLANMYRGLLLNRHGGA 256
           F+H+A +YR +L +RHGG+
Sbjct: 185 FLHVAALYRSVLYSRHGGS 203


>ref|XP_002264470.1| PREDICTED: RING finger protein 170 [Vitis vinifera]
           gi|296089528|emb|CBI39347.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 41/78 (52%), Positives = 58/78 (74%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRLLRE MDPQR+LP + RAR   ++L SI Y+ SP DI+ E + G +G LDDF++  + 
Sbjct: 108 RRLLRELMDPQRSLPLLIRARVYFAMLTSIIYIVSPVDIIPEGVVGILGLLDDFIIAFIC 167

Query: 312 FIHLANMYRGLLLNRHGG 259
           F+H+A +YR +L++RHGG
Sbjct: 168 FLHIAAIYRSVLVHRHGG 185


>gb|AAM63145.1| unknown [Arabidopsis thaliana]
          Length = 185

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 41/79 (51%), Positives = 58/79 (73%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRLLRE MDPQR LP V RAR  ++++LS  Y+ SP DI+ E + G +G LDD L+ ++ 
Sbjct: 107 RRLLREMMDPQRTLPLVIRARVYIALILSAIYIISPIDIIPEGVLGVIGLLDDLLIALIC 166

Query: 312 FIHLANMYRGLLLNRHGGA 256
           F+H+A +YR +L +RHGG+
Sbjct: 167 FLHVAALYRSVLYSRHGGS 185


>gb|AAF18527.1|AC006551_13 Hypothetical protein [Arabidopsis thaliana]
          Length = 191

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 41/79 (51%), Positives = 58/79 (73%)
 Frame = -2

Query: 492 RRLLREFMDPQRALPFVFRARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMV 313
           RRLLRE MDPQR LP V RAR  ++++LS  Y+ SP DI+ E + G +G LDD L+ ++ 
Sbjct: 113 RRLLREMMDPQRTLPLVIRARVYIALILSAIYIISPIDIIPEGVLGVIGLLDDLLIALIC 172

Query: 312 FIHLANMYRGLLLNRHGGA 256
           F+H+A +YR +L +RHGG+
Sbjct: 173 FLHVAALYRSVLYSRHGGS 191


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