BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00023251
         (1361 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi...   597   e-168
gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]     569   e-160
ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [S...   558   e-156
ref|XP_006663406.1| PREDICTED: pentatricopeptide repeat-containi...   557   e-156
gb|EMT01545.1| hypothetical protein F775_52571 [Aegilops tauschii]    556   e-156
dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]    555   e-155
ref|XP_004966624.1| PREDICTED: pentatricopeptide repeat-containi...   554   e-155
ref|XP_002322628.1| pentatricopeptide repeat-containing family p...   553   e-155
gb|EMJ05621.1| hypothetical protein PRUPE_ppb002215mg [Prunus pe...   552   e-154
gb|EOY09049.1| Pentatricopeptide repeat (PPR) superfamily protei...   551   e-154
gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]        550   e-154
ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containi...   548   e-153
ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group] g...   547   e-153
gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvat...   547   e-153
ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   546   e-153
ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containi...   545   e-152
gb|ESW33429.1| hypothetical protein PHAVU_001G068400g [Phaseolus...   541   e-151
ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containi...   540   e-151
ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   539   e-150
ref|XP_003589755.1| Pentatricopeptide repeat-containing protein ...   535   e-149

>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
            mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  597 bits (1538), Expect = e-168
 Identities = 292/456 (64%), Positives = 354/456 (77%), Gaps = 3/456 (0%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++ISGYI+CGM+ EAR LFDR DA+KNVVTWTAM+ GY RS  I +AE+LF  MP KN 
Sbjct: 87   TTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNV 146

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTM+  YA+NG++D A +LF +MP+RNVVSWNT+M  + Q GR++EA RLFD MP R
Sbjct: 147  VSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPER 206

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DVISWT+M+A LS NGR+DEAR+LFDRMPERNVVSWNAMI+GY QNL LD+AL+LF +MP
Sbjct: 207  DVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMP 266

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
            ERD+ SWNTMITG I+N DL RAR LF EM +KNV++WT MITGCV++ ++E ALK+F  
Sbjct: 267  ERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSR 326

Query: 722  ML-TAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCG 898
            ML T G KPNQ T               EGQQ+HQI+SKT+ Q    V SAL+++YSKCG
Sbjct: 327  MLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCG 386

Query: 899  EIAIARKLFE--LLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGL 1072
            E+  ARK+F+  +  Q+DLV WNG+IAAYAHHG G+EA+N F+ M   GFKP+DVTYVGL
Sbjct: 387  ELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGL 446

Query: 1073 LSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISP 1252
            LSACSH+GL +EGL  F  ++ D SI VREDHYA LVDLCGRAGRLKEA  FI+ L   P
Sbjct: 447  LSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKP 506

Query: 1253 SSPSVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            S+  VWGALL GCNVH +VKIG  AAKKL+E EP N
Sbjct: 507  SA-RVWGALLAGCNVHANVKIGKQAAKKLLEVEPEN 541



 Score =  167 bits (422), Expect = 1e-38
 Identities = 115/384 (29%), Positives = 180/384 (46%), Gaps = 37/384 (9%)
 Frame = +2

Query: 263  DRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPARDVISWTSMVAALSHNGRVDEARVLFDR 442
            D NV   N ++  +++ GR+ EA RLFDEM   DVI+WT++++     G ++EAR LFDR
Sbjct: 49   DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDR 108

Query: 443  --------------------------------MPERNVVSWNAMISGYVQNLGLDQALEL 526
                                            MP +NVVSWN MI GY QN  +D A+ L
Sbjct: 109  VDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYL 168

Query: 527  FVKMPERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMAL 706
            F KMPER++VSWNT+++   +   +  AR LF+ M E++V++WTAMI G  ++ + + A 
Sbjct: 169  FEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEAR 228

Query: 707  KMFLEMLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVY 886
             +F  M    V    A                   +   +  +   +  PS N+ +  + 
Sbjct: 229  LLFDRMPERNVVSWNAMITGYAQNLRL-------DEALDLFERMPERDLPSWNTMITGLI 281

Query: 887  SKCGEIAIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLF-RNMHLHGFKPNDVTY 1063
               G++  ARKLF  + +K+++ W  MI      G  +EAL +F R +  +G KPN  T+
Sbjct: 282  QN-GDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTF 340

Query: 1064 VGLLSACSHSGLFDEGLN----LFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFI 1231
            V +L ACS+     EG      + K +  D +  V     ++L+++  + G L  A    
Sbjct: 341  VSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVV-----SALINMYSKCGELGTARKMF 395

Query: 1232 KGLNISPSSPSVWGALLGGCNVHG 1303
                 S      W  ++     HG
Sbjct: 396  DDGMTSQRDLVSWNGIIAAYAHHG 419


>gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]
          Length = 622

 Score =  569 bits (1467), Expect = e-160
 Identities = 273/455 (60%), Positives = 348/455 (76%), Gaps = 2/455 (0%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++I+GY RCGM+ EAR LFDRADA+K+V+TWT M++GY R + I+EAE LF  MP KN 
Sbjct: 78   TTVITGYARCGMIEEARKLFDRADAKKDVITWTVMVNGYLRLRRIKEAERLFFEMPVKNV 137

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTM+  Y +NG+++ A  LF RMP+RNVVSWNTI+ A+ QSGR++EA RLFD MP R
Sbjct: 138  VSWNTMIEGYFQNGRVNSALGLFDRMPERNVVSWNTIITALAQSGRMEEARRLFDMMPER 197

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DVISWT+MVA  S NGR+DEARV+FDRMP +NVVSWNAMI+GY QN+ L++A ELF +MP
Sbjct: 198  DVISWTTMVAGFSRNGRIDEARVVFDRMPVQNVVSWNAMITGYAQNMRLNEAFELFERMP 257

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
            ER++ SWNTMITGFI+N +L RA  LF +M EKN ++WT MI+G ++D QNE ALKMF +
Sbjct: 258  ERNLSSWNTMITGFIQNGELKRASNLFNKMPEKNSISWTTMISGYIQDGQNEEALKMFTK 317

Query: 722  MLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGE 901
            M+  G++PN+AT               EGQQIHQ++SKT+ Q    + SAL+++YSKCGE
Sbjct: 318  MVVDGIRPNEATFASVLSACSNLAGLGEGQQIHQMISKTVFQGSEILVSALINMYSKCGE 377

Query: 902  IAIARKLFE--LLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGLL 1075
            ++ ARK+F+     Q+DLV WNGMIAAYAHHG G EA+NL+  +   GFKPNDVTYVGLL
Sbjct: 378  LSTARKMFDDGSKSQRDLVSWNGMIAAYAHHGCGSEAINLYNELQASGFKPNDVTYVGLL 437

Query: 1076 SACSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPS 1255
            SACSH+GL DEGL  F  ++   ++ V+EDHY   VDLCGRAG+LK+A  FI+ L   PS
Sbjct: 438  SACSHAGLVDEGLRYFDELVKSGTVRVKEDHYTCYVDLCGRAGKLKQAYDFIERLGTKPS 497

Query: 1256 SPSVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            + +VWG LL GCNVHGD+ IG LAA+KL+E EP N
Sbjct: 498  T-TVWGTLLAGCNVHGDMNIGRLAAQKLLEYEPEN 531



 Score =  197 bits (500), Expect = 1e-47
 Identities = 114/403 (28%), Positives = 193/403 (47%), Gaps = 32/403 (7%)
 Frame = +2

Query: 191  NTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFD-------- 346
            N  L   +++G++ +A  +F  MPDR+V++W T++    + G ++EA +LFD        
Sbjct: 47   NWWLTKLSKSGRIGDARQVFDEMPDRDVITWTTVITGYARCGMIEEARKLFDRADAKKDV 106

Query: 347  ------------------------EMPARDVISWTSMVAALSHNGRVDEARVLFDRMPER 454
                                    EMP ++V+SW +M+     NGRV+ A  LFDRMPER
Sbjct: 107  ITWTVMVNGYLRLRRIKEAERLFFEMPVKNVVSWNTMIEGYFQNGRVNSALGLFDRMPER 166

Query: 455  NVVSWNAMISGYVQNLGLDQALELFVKMPERDIVSWNTMITGFIKNKDLSRARGLFEEME 634
            NVVSWN +I+   Q+  +++A  LF  MPERD++SW TM+ GF +N  +  AR +F+ M 
Sbjct: 167  NVVSWNTIITALAQSGRMEEARRLFDMMPERDVISWTTMVAGFSRNGRIDEARVVFDRMP 226

Query: 635  EKNVVTWTAMITGCVEDQQNEMALKMFLEMLTAGVKPNQATXXXXXXXXXXXXXXXEGQQ 814
             +NVV+W AMITG  ++ +   A ++F                                 
Sbjct: 227  VQNVVSWNAMITGYAQNMRLNEAFELF--------------------------------- 253

Query: 815  IHQIVSKTISQFDPSVNSALMSVYSKCGEIAIARKLFELLGQKDLVCWNGMIAAYAHHGN 994
              ++  + +S ++  +   + +     GE+  A  LF  + +K+ + W  MI+ Y   G 
Sbjct: 254  -ERMPERNLSSWNTMITGFIQN-----GELKRASNLFNKMPEKNSISWTTMISGYIQDGQ 307

Query: 995  GQEALNLFRNMHLHGFKPNDVTYVGLLSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYA 1174
             +EAL +F  M + G +PN+ T+  +LSACS+     EG  + + M++    +  E   +
Sbjct: 308  NEEALKMFTKMVVDGIRPNEATFASVLSACSNLAGLGEGQQIHQ-MISKTVFQGSEILVS 366

Query: 1175 SLVDLCGRAGRLKEASSFIKGLNISPSSPSVWGALLGGCNVHG 1303
            +L+++  + G L  A       + S      W  ++     HG
Sbjct: 367  ALINMYSKCGELSTARKMFDDGSKSQRDLVSWNGMIAAYAHHG 409


>ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
            gi|241916012|gb|EER89156.1| hypothetical protein
            SORBIDRAFT_10g002620 [Sorghum bicolor]
          Length = 623

 Score =  558 bits (1438), Expect = e-156
 Identities = 268/453 (59%), Positives = 345/453 (76%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T+++S Y R GML +AR LFDR DA++NVVTWTA+LSGYAR++L+ EAE LF+RMP++N 
Sbjct: 77   TALVSAYARRGMLRDARELFDRPDARRNVVTWTALLSGYARARLVDEAEALFQRMPQRNV 136

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTML  YA  G++ +A  LF RMP R+  SWN ++  + +SG +D+A  LF  MP R
Sbjct: 137  VSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRSGSVDKARELFGRMPER 196

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DV++WT+MV  ++ +G+VDEARVLFD MPERNVVSWNAMISGY +N  +D+AL+LF+KMP
Sbjct: 197  DVMAWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMISGYTRNHRIDEALDLFMKMP 256

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
            ERDI S N M+TGFI+NKDL RAR LF+EM E+NVVTWT M+ G ++ +Q+E+AL +F  
Sbjct: 257  ERDIASCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTTMMNGYLKGKQSELALGLFSG 316

Query: 722  MLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGE 901
            ML AG +PNQ T               EG+Q+HQ++ KT  QFD  V SALM+VY+KCGE
Sbjct: 317  MLMAGTRPNQVTFLGALDACSDLAALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGE 376

Query: 902  IAIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGLLSA 1081
            I +ARKLF+L  +KDL+ WNG+IAAYAHHG G EA+ L+  M  +G++PNDVTYV LLSA
Sbjct: 377  IGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSA 436

Query: 1082 CSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSP 1261
            CSHSGL DEGL +F+ M+ND SI VR++HY  L+DLC RAGRL +A   I  L I P+S 
Sbjct: 437  CSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASG 496

Query: 1262 SVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            SVW ALLGGCN HG+  IGNLAA+ L++AEP+N
Sbjct: 497  SVWSALLGGCNAHGNESIGNLAARNLLQAEPDN 529



 Score =  140 bits (353), Expect = 1e-30
 Identities = 93/339 (27%), Positives = 152/339 (44%), Gaps = 63/339 (18%)
 Frame = +2

Query: 284  NTIMIAMTQSGRLDEAYRLFDEMPARDVISWTSMVAALSHNGR----------------- 412
            N ++  +  +GR+ +A +LFD  P  DV+SWT++V+A +  G                  
Sbjct: 46   NRLIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDRPDARRNV 105

Query: 413  ---------------VDEARVLFDRMPERNVVSWNAMISGY------------------- 490
                           VDEA  LF RMP+RNVVSWN M+  Y                   
Sbjct: 106  VTWTALLSGYARARLVDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVR 165

Query: 491  ------------VQNLGLDQALELFVKMPERDIVSWNTMITGFIKNKDLSRARGLFEEME 634
                        V++  +D+A ELF +MPERD+++W TM+ G  ++  +  AR LF+ M 
Sbjct: 166  DAGSWNILLATLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSMP 225

Query: 635  EKNVVTWTAMITGCVEDQQNEMALKMFLEMLTAGVKPNQATXXXXXXXXXXXXXXXEGQQ 814
            E+NVV+W AMI+G   + + + AL +F++M                              
Sbjct: 226  ERNVVSWNAMISGYTRNHRIDEALDLFMKM------------------------------ 255

Query: 815  IHQIVSKTISQFDPSVNSALMSVYSKCGEIAIARKLFELLGQKDLVCWNGMIAAYAHHGN 994
                      + D +  + +++ + +  ++  AR+LF+ + ++++V W  M+  Y     
Sbjct: 256  ---------PERDIASCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTTMMNGYLKGKQ 306

Query: 995  GQEALNLFRNMHLHGFKPNDVTYVGLLSACSHSGLFDEG 1111
             + AL LF  M + G +PN VT++G L ACS      EG
Sbjct: 307  SELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEG 345


>ref|XP_006663406.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
            mitochondrial-like [Oryza brachyantha]
          Length = 618

 Score =  557 bits (1436), Expect = e-156
 Identities = 263/453 (58%), Positives = 343/453 (75%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++++ Y+R GML EARALFDR DA++NVVTWTA++SGYAR+  + EAE LFERMPE+N 
Sbjct: 72   TAMVAAYVRQGMLREARALFDRPDARRNVVTWTALMSGYARAHCVDEAEALFERMPERNI 131

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTML  Y   G++ +A+ LF  MP R+  SWN ++ A+ +SG L++A ++F+ MPAR
Sbjct: 132  VSWNTMLEAYTTVGRVQDAYALFNSMPVRDCGSWNILLAALVRSGNLEKACQVFERMPAR 191

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DV+SWT+MV+ L+ NG VDEARVLFD MP+RNVVSWNAMISGY +N  +++AL+LF KMP
Sbjct: 192  DVMSWTTMVSGLARNGSVDEARVLFDAMPKRNVVSWNAMISGYARNHRIEEALDLFTKMP 251

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
             RD+ SWN MITGFI+NKDL  AR LF+EM ++NV+TWT M+ G ++  Q+EMALK+F  
Sbjct: 252  VRDVASWNIMITGFIQNKDLKSARELFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNC 311

Query: 722  MLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGE 901
            ML  G++PNQ T               EGQQIHQ++ KT  QFD  V S LM++Y+KCGE
Sbjct: 312  MLVEGIRPNQVTFLGSLDACSNLAALCEGQQIHQMIYKTSFQFDTFVESTLMNLYAKCGE 371

Query: 902  IAIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGLLSA 1081
            I +AR +F+   +KDL+ WNG+IAAYAHHG G EA++L++ M  +G+KPNDVTYVGLLSA
Sbjct: 372  ITLARNVFDFATEKDLISWNGIIAAYAHHGFGIEAMHLYKKMQENGYKPNDVTYVGLLSA 431

Query: 1082 CSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSP 1261
            CSHSGL D+GL +F+ M+ D SI VR++HY  L+DLC R GRL +A   I    I P+S 
Sbjct: 432  CSHSGLVDKGLKIFESMVKDSSIVVRDEHYTCLIDLCSRGGRLDDARRLISWFKIKPTSS 491

Query: 1262 SVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            SVW ALLGGCN HG+  +GNLAAK L+EAEP+N
Sbjct: 492  SVWRALLGGCNAHGNESMGNLAAKNLLEAEPDN 524



 Score =  169 bits (429), Expect = 2e-39
 Identities = 108/372 (29%), Positives = 183/372 (49%), Gaps = 32/372 (8%)
 Frame = +2

Query: 191  NTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPA-RDV 367
            N  +A  A  G++ +A  LF   PDR+VVSW  ++ A  + G L EA  LFD   A R+V
Sbjct: 41   NCCIAELAAAGRILDARRLFDGTPDRDVVSWTAMVAAYVRQGMLREARALFDRPDARRNV 100

Query: 368  ISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGY------------------- 490
            ++WT++++  +    VDEA  LF+RMPERN+VSWN M+  Y                   
Sbjct: 101  VTWTALMSGYARAHCVDEAEALFERMPERNIVSWNTMLEAYTTVGRVQDAYALFNSMPVR 160

Query: 491  ------------VQNLGLDQALELFVKMPERDIVSWNTMITGFIKNKDLSRARGLFEEME 634
                        V++  L++A ++F +MP RD++SW TM++G  +N  +  AR LF+ M 
Sbjct: 161  DCGSWNILLAALVRSGNLEKACQVFERMPARDVMSWTTMVSGLARNGSVDEARVLFDAMP 220

Query: 635  EKNVVTWTAMITGCVEDQQNEMALKMFLEMLTAGVKPNQATXXXXXXXXXXXXXXXEGQQ 814
            ++NVV+W AMI+G   + + E AL +F +M                              
Sbjct: 221  KRNVVSWNAMISGYARNHRIEEALDLFTKM-----------------------------P 251

Query: 815  IHQIVSKTISQFDPSVNSALMSVYSKCGEIAIARKLFELLGQKDLVCWNGMIAAYAHHGN 994
            +  + S  I          +++ + +  ++  AR+LF+ + +++++ W  M+  Y     
Sbjct: 252  VRDVASWNI----------MITGFIQNKDLKSARELFDEMPKRNVITWTTMMNGYLQCMQ 301

Query: 995  GQEALNLFRNMHLHGFKPNDVTYVGLLSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYA 1174
             + AL LF  M + G +PN VT++G L ACS+     EG  + + M+   S +      +
Sbjct: 302  SEMALKLFNCMLVEGIRPNQVTFLGSLDACSNLAALCEGQQIHQ-MIYKTSFQFDTFVES 360

Query: 1175 SLVDLCGRAGRL 1210
            +L++L  + G +
Sbjct: 361  TLMNLYAKCGEI 372


>gb|EMT01545.1| hypothetical protein F775_52571 [Aegilops tauschii]
          Length = 911

 Score =  556 bits (1433), Expect = e-156
 Identities = 262/453 (57%), Positives = 341/453 (75%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++++ Y R G LHEA ALF R DA++NVVTWTA+LSGYAR++   EA  LF+RMPE+N 
Sbjct: 56   TAMVAAYARQGQLHEASALFHRPDARRNVVTWTALLSGYARARRADEARALFDRMPERNV 115

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTML  YA  G+   A  LF  MP R+  SWN ++ A+ +SG +DEA  LF+ MP R
Sbjct: 116  VSWNTMLEAYASAGRTGAACALFDSMPVRDAGSWNILLAALVRSGTMDEARNLFERMPER 175

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            +V+SWT+MVA L+ +G VDEAR LFD MPERNVVSWNAMISGY +NL +D+AL+LF+ MP
Sbjct: 176  NVMSWTTMVAGLARSGSVDEARGLFDGMPERNVVSWNAMISGYARNLRIDEALDLFMNMP 235

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
            ERD+ SWN MITGFI+NKDL +A+ LF+EM ++NVV+WT M+ GC++  ++EMAL++F  
Sbjct: 236  ERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNG 295

Query: 722  MLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGE 901
            ML  G++PNQ T               EGQQ+HQ++ KT  QFD  + S LM++Y+KCGE
Sbjct: 296  MLVDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDNFIESTLMNLYAKCGE 355

Query: 902  IAIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGLLSA 1081
            I +ARK+F+L G+KD++ WNG+IAAYAHHG G EA+ L+  M  +G+KPNDVTYVGLLSA
Sbjct: 356  IRLARKVFDLSGEKDVISWNGIIAAYAHHGAGVEAIALYEKMQENGYKPNDVTYVGLLSA 415

Query: 1082 CSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSP 1261
            CSHSGL DEGL +F+ M  D SI VR++HY  L+DLC RAGRL +A   I GL + P+S 
Sbjct: 416  CSHSGLVDEGLRIFEYMAKDQSIAVRDEHYTCLIDLCSRAGRLDDAKRLINGLELKPTSS 475

Query: 1262 SVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            +VW ALLGGCN HG+  IG+LAA+ L+EAEP+N
Sbjct: 476  TVWSALLGGCNAHGNESIGDLAARNLLEAEPDN 508



 Score =  151 bits (382), Expect = 5e-34
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 66/396 (16%)
 Frame = +2

Query: 314  GRLDEAYRLFDEMPARDVISWTSMVAALSHNG---------------------------- 409
            GR+ +A RLFD  P RDV+SWT+MVAA +  G                            
Sbjct: 35   GRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALFHRPDARRNVVTWTALLSGY 94

Query: 410  ----RVDEARVLFDRMPERNVVSWNAMISGY----------------------------- 490
                R DEAR LFDRMPERNVVSWN M+  Y                             
Sbjct: 95   ARARRADEARALFDRMPERNVVSWNTMLEAYASAGRTGAACALFDSMPVRDAGSWNILLA 154

Query: 491  --VQNLGLDQALELFVKMPERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAM 664
              V++  +D+A  LF +MPER+++SW TM+ G  ++  +  ARGLF+ M E+NVV+W AM
Sbjct: 155  ALVRSGTMDEARNLFERMPERNVMSWTTMVAGLARSGSVDEARGLFDGMPERNVVSWNAM 214

Query: 665  ITGCVEDQQNEMALKMFLEMLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTIS 844
            I+G   + + + AL +F+ M                                        
Sbjct: 215  ISGYARNLRIDEALDLFMNM---------------------------------------P 235

Query: 845  QFDPSVNSALMSVYSKCGEIAIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRN 1024
            + D +  + +++ + +  ++  A++LF+ + ++++V W  M+         + AL +F  
Sbjct: 236  ERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNG 295

Query: 1025 MHLHGFKPNDVTYVGLLSACSHSGLFDEGLNLFKCMMNDPSIEVREDHY--ASLVDLCGR 1198
            M + G +PN VT++G + ACS+     EG  + + +   P    + D++  ++L++L  +
Sbjct: 296  MLVDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTP---FQFDNFIESTLMNLYAK 352

Query: 1199 AGRLKEASSFIKGLNISPSSPSV-WGALLGGCNVHG 1303
             G ++ A    K  ++S     + W  ++     HG
Sbjct: 353  CGEIRLAR---KVFDLSGEKDVISWNGIIAAYAHHG 385


>dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 623

 Score =  555 bits (1430), Expect = e-155
 Identities = 259/453 (57%), Positives = 342/453 (75%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++++ Y R G LHEA AL  R DA++NVVTWTA+LSGYAR++ + EA  LF+RMPE+N 
Sbjct: 74   TAMVAAYARQGQLHEASALLHRPDARRNVVTWTALLSGYARARRVDEARALFDRMPERNV 133

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTML  YA  G++  A  LF  MP R+  SWN ++ A+ +SG +DEA RLF+ MP R
Sbjct: 134  VSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLAALVRSGTMDEARRLFERMPER 193

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            +V+SWT+M++ L+ +G  DEAR LFD MPERNVVSWNAMISGY +NL +D+AL+LF+ MP
Sbjct: 194  NVMSWTTMISGLARSGSADEARALFDGMPERNVVSWNAMISGYARNLRIDEALDLFMNMP 253

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
            ERD+ SWN MITGFI+NKDL +A+ LF+EM ++NVV+WT M+ GC++  ++EMAL++F  
Sbjct: 254  ERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNG 313

Query: 722  MLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGE 901
            ML  G++PNQ T               EGQQ+HQ++ KT  QFD  + S+LM +Y+KCGE
Sbjct: 314  MLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGE 373

Query: 902  IAIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGLLSA 1081
            I +ARK+F+L G+KD++ WNGMIAAYAHHG G EA+ L+  M  + +KPNDVTYVGLLSA
Sbjct: 374  IRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIALYEKMQENRYKPNDVTYVGLLSA 433

Query: 1082 CSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSP 1261
            CSHSGL DEGL +F+ M  D SI VR++HY+ L+DLC RAGRL +A   I GL + P+S 
Sbjct: 434  CSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSRAGRLDDAKRLINGLKLKPTSS 493

Query: 1262 SVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            +VW ALLGGCN HG+  IG+LAA+ L+EAEP+N
Sbjct: 494  TVWSALLGGCNAHGNESIGDLAARNLLEAEPDN 526



 Score =  148 bits (374), Expect = 5e-33
 Identities = 104/375 (27%), Positives = 173/375 (46%), Gaps = 35/375 (9%)
 Frame = +2

Query: 284  NTIMIAMTQSGRLDEAYRLFDEMPARDVISWTSMVAALSHNG------------------ 409
            N  +  +  +GR+ +A RLFD  P RDV+SWT+MVAA +  G                  
Sbjct: 43   NRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALLHRPDARRNV 102

Query: 410  --------------RVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMPER 547
                          RVDEAR LFDRMPERNVVSWN M+  Y     +  A  LF  MP R
Sbjct: 103  VTWTALLSGYARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGMPVR 162

Query: 548  DIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLEML 727
            D  SWN ++   +++  +  AR LFE M E+NV++WT MI+G       + A  +F  M 
Sbjct: 163  DAGSWNILLAALVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGM- 221

Query: 728  TAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGEIA 907
                + N  +               E   +       + + D +  + +++ + +  ++ 
Sbjct: 222  ---PERNVVSWNAMISGYARNLRIDEALDLFM----NMPERDVASWNIMITGFIQNKDLK 274

Query: 908  IARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGLLSACS 1087
             A++LF+ + ++++V W  M+         + AL +F  M + G +PN VT++G + A S
Sbjct: 275  KAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGS 334

Query: 1088 HSGLFDEGLNLFKCMMNDPSIEVREDHY--ASLVDLCGRAGRLKEASSFIKGLNISPSSP 1261
            +     EG  + + +   P    + D++  +SL+ L  + G ++ A    K  ++S    
Sbjct: 335  NLAGLSEGQQVHQMICKTP---FQFDNFIESSLMKLYAKCGEIRLAR---KVFDLSGEKD 388

Query: 1262 SV-WGALLGGCNVHG 1303
             + W  ++     HG
Sbjct: 389  VISWNGMIAAYAHHG 403


>ref|XP_004966624.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
            mitochondrial-like [Setaria italica]
          Length = 618

 Score =  554 bits (1428), Expect = e-155
 Identities = 266/453 (58%), Positives = 340/453 (75%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T+++S Y R GML +ARALFD  DA++NVVTWTA+LSGYAR++ + EAE LFERMPE+N 
Sbjct: 74   TAMVSAYARRGMLRDARALFDHPDARRNVVTWTALLSGYARARRVEEAEALFERMPERNV 133

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTML  Y   G++D+A  LF RMP R+  SWN ++ A+ ++GR+DEA +LF  MP R
Sbjct: 134  VSWNTMLEAYVAAGRVDDACTLFDRMPVRDAGSWNILLAALVRAGRVDEARKLFQRMPGR 193

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DV+++T+MV  ++  G VDEARVLFD MP RNVVSWNAMISGY+ N  +D+AL+LF+KM 
Sbjct: 194  DVMAYTTMVTGIARYGNVDEARVLFDAMPNRNVVSWNAMISGYIGNHRIDEALDLFMKMN 253

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
             RD  SWN MI GFI+NKDL RAR LF++  E+NVVTWT M+ G ++  Q+E+AL++F  
Sbjct: 254  RRDTASWNIMINGFIQNKDLKRARELFDKTPERNVVTWTTMMKGYLQGMQSELALRLFNG 313

Query: 722  MLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGE 901
            MLT GV PN+ T               EGQQ+HQ++ KT  QFD  V SALM+VYSKCGE
Sbjct: 314  MLTEGVTPNKVTFLGALDACSNLAALCEGQQVHQMICKTAFQFDTFVESALMNVYSKCGE 373

Query: 902  IAIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGLLSA 1081
            I +ARKLF++  +KDL+ WNG+IAAYAHHG   EA+ L+  M  +G+KPNDVTYV LLSA
Sbjct: 374  IGLARKLFDVSREKDLISWNGIIAAYAHHGVALEAIRLYDKMQENGYKPNDVTYVVLLSA 433

Query: 1082 CSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSP 1261
            CSHSGL D+GL +F+ M+ D S+ VR++HY SL+DLC RAGRL +A   I  L I P+S 
Sbjct: 434  CSHSGLVDDGLKIFESMVKDRSVAVRDEHYTSLIDLCSRAGRLDDAKRLIHCLKIKPASG 493

Query: 1262 SVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            SVW ALLGGCN HG+V IGNLAA+ L+EAEP+N
Sbjct: 494  SVWSALLGGCNAHGNVSIGNLAARSLLEAEPDN 526



 Score =  160 bits (406), Expect = 9e-37
 Identities = 103/340 (30%), Positives = 167/340 (49%), Gaps = 1/340 (0%)
 Frame = +2

Query: 95   WTAMLSGYARSKLIREAEELFERMPEKNCISWNTMLACYAENGQLDEAFHLFTRMPDRNV 274
            W A  + Y  +     A  L        CI      A  A  G++ +A  LF   PDR+V
Sbjct: 17   WLATCASYGGASASAAAVGLERVEDSSRCI------AELAAEGRVWDARRLFEGTPDRDV 70

Query: 275  VSWNTIMIAMTQSGRLDEAYRLFDEMPA-RDVISWTSMVAALSHNGRVDEARVLFDRMPE 451
            V+W  ++ A  + G L +A  LFD   A R+V++WT++++  +   RV+EA  LF+RMPE
Sbjct: 71   VAWTAMVSAYARRGMLRDARALFDHPDARRNVVTWTALLSGYARARRVEEAEALFERMPE 130

Query: 452  RNVVSWNAMISGYVQNLGLDQALELFVKMPERDIVSWNTMITGFIKNKDLSRARGLFEEM 631
            RNVVSWN M+  YV    +D A  LF +MP RD  SWN ++   ++   +  AR LF+ M
Sbjct: 131  RNVVSWNTMLEAYVAAGRVDDACTLFDRMPVRDAGSWNILLAALVRAGRVDEARKLFQRM 190

Query: 632  EEKNVVTWTAMITGCVEDQQNEMALKMFLEMLTAGVKPNQATXXXXXXXXXXXXXXXEGQ 811
              ++V+ +T M+TG       + A  +F  M      PN+                   +
Sbjct: 191  PGRDVMAYTTMVTGIARYGNVDEARVLFDAM------PNRNVVSWNAMISGYIGNHRIDE 244

Query: 812  QIHQIVSKTISQFDPSVNSALMSVYSKCGEIAIARKLFELLGQKDLVCWNGMIAAYAHHG 991
             +   +   +++ D +  + +++ + +  ++  AR+LF+   ++++V W  M+  Y    
Sbjct: 245  ALDLFMK--MNRRDTASWNIMINGFIQNKDLKRARELFDKTPERNVVTWTTMMKGYLQGM 302

Query: 992  NGQEALNLFRNMHLHGFKPNDVTYVGLLSACSHSGLFDEG 1111
              + AL LF  M   G  PN VT++G L ACS+     EG
Sbjct: 303  QSELALRLFNGMLTEGVTPNKVTFLGALDACSNLAALCEG 342


>ref|XP_002322628.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222867258|gb|EEF04389.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 559

 Score =  553 bits (1426), Expect = e-155
 Identities = 272/456 (59%), Positives = 349/456 (76%), Gaps = 3/456 (0%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++ISGYI+CG++ +AR LFDR DA K+VVTWTAMLSGY R K I EAE LFE MP KN 
Sbjct: 10   TAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERLFEVMPVKNV 69

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTM+  Y +N ++D+A  +F RM +RN+VSWN ++ A+ Q GR++EA R FDEMP R
Sbjct: 70   VSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEARRRFDEMPKR 129

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DVISWT+MV  L+ +GRVDEAR +FDRMPERNVVSWNAM++GY +N+ LD+A +LF +MP
Sbjct: 130  DVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDEAFDLFERMP 189

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
            ER++ SWNTMITGFI+N +L+ AR +F EM EKNVV+WT MITG V++ ++E ALK+F+E
Sbjct: 190  ERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGESESALKVFVE 249

Query: 722  ML-TAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCG 898
            M+   G +PN+ T               EGQQ+H ++SK++ Q    V SAL+++YSKCG
Sbjct: 250  MIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVASALLNMYSKCG 309

Query: 899  EIAIARKLFE--LLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGL 1072
            E++IARK+F+  ++ Q+DLV WNGMIAAYAHHG G EA+ LF +M   GFKPNDV+YV L
Sbjct: 310  ELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVEL 369

Query: 1073 LSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISP 1252
            LSACSH+GL DEGLN F  +  D SI++REDH+A LVDLCGRAGRLKEA  FIK L    
Sbjct: 370  LSACSHAGLVDEGLNYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYDFIKQLGTKA 429

Query: 1253 SSPSVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            SS S+WG LL GCN HGD++IG LAAK+L + +P N
Sbjct: 430  SS-SIWGGLLAGCNAHGDLEIGQLAAKELEKEDPEN 464



 Score =  143 bits (360), Expect = 2e-31
 Identities = 97/343 (28%), Positives = 169/343 (49%), Gaps = 25/343 (7%)
 Frame = +2

Query: 350  MPARDVISWTSMVAALSHNGRVDEARVLFDRMPE-RNVVSWNAMISGYVQNLGLDQALEL 526
            M  RDV++WT++++     G + +AR LFDR+   ++VV+W AM+SGYV+   +++A  L
Sbjct: 1    MHERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERL 60

Query: 527  FVKMPERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMAL 706
            F  MP +++VSWNTMI G+ KN+++ +A  +FE M E+N+V+W A+I   V+  + E A 
Sbjct: 61   FEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEAR 120

Query: 707  KMFLEMLTAGV-----------------KPNQATXXXXXXXXXXXXXXXEGQQIHQIVSK 835
            + F EM    V                 +  +                  G   +  + +
Sbjct: 121  RRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDE 180

Query: 836  TISQFD--PSVN----SALMSVYSKCGEIAIARKLFELLGQKDLVCWNGMIAAYAHHGNG 997
                F+  P  N    + +++ + + GE+A ARK+F  + +K++V W  MI  Y   G  
Sbjct: 181  AFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGES 240

Query: 998  QEALNLFRNMHLH-GFKPNDVTYVGLLSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYA 1174
            + AL +F  M    G +PN+ T+V +L ACS      EG  +   +++    + R    +
Sbjct: 241  ESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEGQQV-HLLISKSVYQDRTFVAS 299

Query: 1175 SLVDLCGRAGRLKEASSFIKGLNISPSSPSVWGALLGGCNVHG 1303
            +L+++  + G L  A      + IS     +W  ++     HG
Sbjct: 300  ALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYAHHG 342


>gb|EMJ05621.1| hypothetical protein PRUPE_ppb002215mg [Prunus persica]
          Length = 634

 Score =  552 bits (1422), Expect = e-154
 Identities = 276/454 (60%), Positives = 342/454 (75%), Gaps = 3/454 (0%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++I+GYIRCGM+ EAR+LFDR DA+K+V+TWTA++SGY R K ++EAE LF +MP KN 
Sbjct: 88   TTVITGYIRCGMMEEARSLFDRVDAKKDVITWTALVSGYIRLKQMKEAERLFYQMPVKNV 147

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTM+  YA N Q+D A  LF RMP++NVVSWNT++ A+  SGR++EA   F+ MP R
Sbjct: 148  VSWNTMIDGYARNCQVDMALELFERMPEKNVVSWNTVLTALAHSGRIEEARTRFNLMPER 207

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DVISWT+MVA  S NG +DEAR  FDRMP+RNVVSWNAMI+GY QN+ LD+ALELF +MP
Sbjct: 208  DVISWTAMVAGFSRNGMIDEAREFFDRMPKRNVVSWNAMITGYTQNMRLDEALELFERMP 267

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
             RD+ SWNTMITGFI+N DL RA+ LF  M +KNV++WT MITG V+D QNE AL  F +
Sbjct: 268  GRDMPSWNTMITGFIQNGDLKRAQELFIRMPQKNVISWTTMITGYVQDGQNEKALMFFSK 327

Query: 722  MLT-AGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCG 898
            ML   GVKPNQ T               EGQQIHQ++SKT+      + SAL+++YSKCG
Sbjct: 328  MLVDNGVKPNQGTFVSVLSACSNLAGFSEGQQIHQMISKTVHHECAFLVSALINMYSKCG 387

Query: 899  EIAIARKLFE--LLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGL 1072
            E+  ARK+F+  L   +D+V WNGMIAAYAHHG G EA+NLF  M   G KP+DVTYVGL
Sbjct: 388  ELVTARKMFDDGLTIHRDMVSWNGMIAAYAHHGCGIEAINLFNEMRKLGCKPDDVTYVGL 447

Query: 1073 LSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISP 1252
            LSACSH+GL +EGL  F  ++ D SI+VREDHY  LVDLCGRAGRLKEA + ++ L  + 
Sbjct: 448  LSACSHAGLVEEGLKYFNELLRDGSIQVREDHYTCLVDLCGRAGRLKEAFNVLEKLG-TK 506

Query: 1253 SSPSVWGALLGGCNVHGDVKIGNLAAKKLMEAEP 1354
             S SVWGALL GCNVHG++ IG LAA+KL+E EP
Sbjct: 507  ISASVWGALLAGCNVHGNMDIGKLAAEKLLEGEP 540



 Score =  189 bits (479), Expect = 3e-45
 Identities = 120/379 (31%), Positives = 201/379 (53%), Gaps = 3/379 (0%)
 Frame = +2

Query: 176  NCISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMP 355
            N    N ++   +++G+  EA  +F  MPD++VV+W T++    + G ++EA  LFD + 
Sbjct: 52   NVAQSNWLITRLSKDGKFREARQVFDGMPDKDVVTWTTVITGYIRCGMMEEARSLFDRVD 111

Query: 356  A-RDVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFV 532
            A +DVI+WT++V+      ++ EA  LF +MP +NVVSWN MI GY +N  +D ALELF 
Sbjct: 112  AKKDVITWTALVSGYIRLKQMKEAERLFYQMPVKNVVSWNTMIDGYARNCQVDMALELFE 171

Query: 533  KMPERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKM 712
            +MPE+++VSWNT++T    +  +  AR  F  M E++V++WTAM+ G   +   + A + 
Sbjct: 172  RMPEKNVVSWNTVLTALAHSGRIEEARTRFNLMPERDVISWTAMVAGFSRNGMIDEAREF 231

Query: 713  FLEMLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSK 892
            F  M     K N  +               E  ++ +   +   +  PS N+ +++ + +
Sbjct: 232  FDRM----PKRNVVSWNAMITGYTQNMRLDEALELFE---RMPGRDMPSWNT-MITGFIQ 283

Query: 893  CGEIAIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHL-HGFKPNDVTYVG 1069
             G++  A++LF  + QK+++ W  MI  Y   G  ++AL  F  M + +G KPN  T+V 
Sbjct: 284  NGDLKRAQELFIRMPQKNVISWTTMITGYVQDGQNEKALMFFSKMLVDNGVKPNQGTFVS 343

Query: 1070 LLSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEA-SSFIKGLNI 1246
            +LSACS+   F EG  + + +      E      ++L+++  + G L  A   F  GL I
Sbjct: 344  VLSACSNLAGFSEGQQIHQMISKTVHHEC-AFLVSALINMYSKCGELVTARKMFDDGLTI 402

Query: 1247 SPSSPSVWGALLGGCNVHG 1303
                 S W  ++     HG
Sbjct: 403  HRDMVS-WNGMIAAYAHHG 420


>gb|EOY09049.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            1 [Theobroma cacao] gi|508717153|gb|EOY09050.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative isoform 1 [Theobroma cacao]
          Length = 631

 Score =  551 bits (1421), Expect = e-154
 Identities = 269/456 (58%), Positives = 346/456 (75%), Gaps = 3/456 (0%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++ISGYI+ G++ EAR LFDR D++KNVVTWTAMLSGY RS  I EA+ LF+ MP KN 
Sbjct: 83   TALISGYIKLGLIEEARRLFDRVDSKKNVVTWTAMLSGYMRSNRILEAKRLFDEMPVKNV 142

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTM+  Y +NG + +AF LF  MP+RNVVSWNT++ A+ Q GR+++A  LFD MP R
Sbjct: 143  VSWNTMVDGYVQNGMVGKAFELFQEMPERNVVSWNTMLTALAQCGRVEDARGLFDRMPKR 202

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DVISWT+MVA L+ NG++DEAR +FDRMPERNVVSWNAMI+GY QN+ LD+A ELF +MP
Sbjct: 203  DVISWTAMVAGLAKNGKIDEARRVFDRMPERNVVSWNAMITGYSQNMKLDEAFELFERMP 262

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
            ER++ SWN MITGFI+N +L RA  LF+++  KNVV+WT MITG V+D+Q+E ALK+F +
Sbjct: 263  ERNLSSWNAMITGFIQNGELKRAEKLFDKVPRKNVVSWTTMITGYVQDEQSEEALKIFSK 322

Query: 722  MLTA-GVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCG 898
            M+   GVKPN+ T               EGQQ+HQ ++KTI Q    V SA++++YSKCG
Sbjct: 323  MMAEDGVKPNEGTFVSVLSACSDLAGLFEGQQVHQTLAKTIYQCSEIVVSAIINMYSKCG 382

Query: 899  EIAIARKLFE--LLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGL 1072
            E+  AR++F+  L+ Q+D+V WNGMIAAYAHHG G EA++LF+ M   GFKPN  TYV L
Sbjct: 383  ELNAARRMFDDGLISQRDVVSWNGMIAAYAHHGCGGEAISLFKKMSGFGFKPNGATYVAL 442

Query: 1073 LSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISP 1252
            LSACSHSG+ ++GL  F  ++ D SI+V+EDHYA LVDLC RAG+LKEA  FI  L   P
Sbjct: 443  LSACSHSGMVEDGLRYFDELVRDKSIQVKEDHYACLVDLCSRAGKLKEAFEFIMRLGTKP 502

Query: 1253 SSPSVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            S+ S+W ALL GC+VHGDV +G LAA+K++E EP N
Sbjct: 503  SA-SIWEALLAGCHVHGDVNLGKLAAEKILETEPEN 537



 Score =  170 bits (430), Expect = 1e-39
 Identities = 110/381 (28%), Positives = 188/381 (49%), Gaps = 36/381 (9%)
 Frame = +2

Query: 269  NVVSWNTIMIAMTQSGRLDEAYRLFDEMPARD---------------------------- 364
            +V   N ++  ++  G++ +  +LFD+MP RD                            
Sbjct: 45   SVAQSNWLITKLSTEGKISQVRKLFDQMPDRDKDVITWTALISGYIKLGLIEEARRLFDR 104

Query: 365  ------VISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALEL 526
                  V++WT+M++    + R+ EA+ LFD MP +NVVSWN M+ GYVQN  + +A EL
Sbjct: 105  VDSKKNVVTWTAMLSGYMRSNRILEAKRLFDEMPVKNVVSWNTMVDGYVQNGMVGKAFEL 164

Query: 527  FVKMPERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMAL 706
            F +MPER++VSWNTM+T   +   +  ARGLF+ M +++V++WTAM+ G  ++ + + A 
Sbjct: 165  FQEMPERNVVSWNTMLTALAQCGRVEDARGLFDRMPKRDVISWTAMVAGLAKNGKIDEAR 224

Query: 707  KMFLEMLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVY 886
            ++F  M    V    A                  +   ++  + +S +     +A+++ +
Sbjct: 225  RVFDRMPERNVVSWNAMITGYSQNMKLDEAF---ELFERMPERNLSSW-----NAMITGF 276

Query: 887  SKCGEIAIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLH-GFKPNDVTY 1063
             + GE+  A KLF+ + +K++V W  MI  Y      +EAL +F  M    G KPN+ T+
Sbjct: 277  IQNGELKRAEKLFDKVPRKNVVSWTTMITGYVQDEQSEEALKIFSKMMAEDGVKPNEGTF 336

Query: 1064 VGLLSACSH-SGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGL 1240
            V +LSACS  +GLF EG  + + +      +  E   ++++++  + G L  A       
Sbjct: 337  VSVLSACSDLAGLF-EGQQVHQTLAK-TIYQCSEIVVSAIINMYSKCGELNAARRMFDDG 394

Query: 1241 NISPSSPSVWGALLGGCNVHG 1303
             IS      W  ++     HG
Sbjct: 395  LISQRDVVSWNGMIAAYAHHG 415


>gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
          Length = 620

 Score =  550 bits (1416), Expect = e-154
 Identities = 264/453 (58%), Positives = 343/453 (75%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T+++S Y R GML +AR+LFDR+DA++NVVTWTA+LSGYAR+ L+ EAE LF+RMP++N 
Sbjct: 75   TALVSAYARRGMLRDARSLFDRSDARRNVVTWTALLSGYARAGLVDEAEVLFQRMPQRNV 134

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTML  YA  G+  +A  LF RMP R+  SWN ++  + +SG +D+A  LF  MP R
Sbjct: 135  VSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLAMLVRSGSVDKARELFGRMPER 194

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DV++WT+MV  ++ +G VDEAR+LFD MPERNVVSWNAMISGY +N  LD+AL+LF KMP
Sbjct: 195  DVMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMISGYTRNHRLDEALDLFTKMP 254

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
             RDI S N MITGFI+NKDL RAR LF+EM E+NVVTWT M+ G ++ +Q+E++L +F  
Sbjct: 255  HRDIASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRG 314

Query: 722  MLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGE 901
            ML +G++PNQ T               EG+Q+HQ++ KT  Q D  V SALM+VY+KCGE
Sbjct: 315  MLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGE 374

Query: 902  IAIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGLLSA 1081
            + +ARKLF+L  +KDL+ WNG+IAAYAHHG G EA++L+  M  +G++PNDVTYV LLSA
Sbjct: 375  VGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSA 434

Query: 1082 CSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSP 1261
            CSHSGL DEGL +F+ M+ND SI VR++HY  L+DLC RAGRL +A   I  L I P+S 
Sbjct: 435  CSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASG 494

Query: 1262 SVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            SVW ALLGGCN HG+  IGNLAA+ L++AEP+N
Sbjct: 495  SVWSALLGGCNAHGNESIGNLAARNLIQAEPDN 527



 Score =  149 bits (377), Expect = 2e-33
 Identities = 97/339 (28%), Positives = 158/339 (46%), Gaps = 63/339 (18%)
 Frame = +2

Query: 284  NTIMIAMTQSGRLDEAYRLFDEMPARDVISWTSMVAALSHNGR----------------- 412
            N +++ +  +GR+ +A +LFD  P RDV+SWT++V+A +  G                  
Sbjct: 44   NRLIVDLAAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNV 103

Query: 413  ---------------VDEARVLFDRMPERNVVSWNAMISGY------------------- 490
                           VDEA VLF RMP+RNVVSWN M+  Y                   
Sbjct: 104  VTWTALLSGYARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVR 163

Query: 491  ------------VQNLGLDQALELFVKMPERDIVSWNTMITGFIKNKDLSRARGLFEEME 634
                        V++  +D+A ELF +MPERD+++W TM+ G  ++ ++  AR LF+ M 
Sbjct: 164  DAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMP 223

Query: 635  EKNVVTWTAMITGCVEDQQNEMALKMFLEMLTAGVKPNQATXXXXXXXXXXXXXXXEGQQ 814
            E+NVV+W AMI+G   + + + AL +F +M      P++                     
Sbjct: 224  ERNVVSWNAMISGYTRNHRLDEALDLFTKM------PHR--------------------- 256

Query: 815  IHQIVSKTISQFDPSVNSALMSVYSKCGEIAIARKLFELLGQKDLVCWNGMIAAYAHHGN 994
                        D +  + +++ + +  ++  ARKLF+ + ++++V W  M+  Y     
Sbjct: 257  ------------DIASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQ 304

Query: 995  GQEALNLFRNMHLHGFKPNDVTYVGLLSACSHSGLFDEG 1111
             + +L LFR M + G +PN VT++G L ACS      EG
Sbjct: 305  SELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEG 343


>ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
            mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  548 bits (1411), Expect = e-153
 Identities = 270/456 (59%), Positives = 342/456 (75%), Gaps = 3/456 (0%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++I+GYI+CGM+ EA+ LFDR DA KNVVTWTA++SGY R   I EA  LF+ MP KN 
Sbjct: 101  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNV 160

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            ISWNTM+  YA  G +D+A  LF +MP+RNVVSWNT++ A  Q  R+DEA  LF+ MP R
Sbjct: 161  ISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPER 220

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DVISWT+MVA LS NGR+D+AR+LFD+MP RNVVSWN MI GY QN+ LD+A +LF +MP
Sbjct: 221  DVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMP 280

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
            ER++ SWNTMITGFI+N  L RA   F +M  KNVVTWTA+I+G V+D ++E ALK+F E
Sbjct: 281  ERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSE 340

Query: 722  MLTA-GVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCG 898
            M  A  VKPN+ T               EGQQIHQI+SKT+ Q    V SAL+++YSKCG
Sbjct: 341  MQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCG 400

Query: 899  EIAIARKLFE--LLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGL 1072
            E+ +ARK+F+   +G +D+V WNGMIAAYAHHG+G +A++LF  M   GF+P++VTY+ L
Sbjct: 401  ELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIAL 460

Query: 1073 LSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISP 1252
            LSACSH+GL DEGL LF+ ++ D SI++REDH+  LVDL GRAGRL+EA  FIKGL + P
Sbjct: 461  LSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKP 520

Query: 1253 SSPSVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            S+ SVW ALL GCNVHG + +G L A+KL+E EP N
Sbjct: 521  SA-SVWAALLAGCNVHGHIDLGKLTAEKLLETEPEN 555



 Score =  196 bits (497), Expect = 2e-47
 Identities = 113/374 (30%), Positives = 196/374 (52%), Gaps = 3/374 (0%)
 Frame = +2

Query: 191  NTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPA-RDV 367
            N ++    + G++ EA  +F  MPDR+VVSW  ++    + G ++EA  LFD   A ++V
Sbjct: 70   NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNV 129

Query: 368  ISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMPER 547
            ++WT++V+      R++EAR LFD MP +NV+SWN MI GY +   +DQAL+LF KMPER
Sbjct: 130  VTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPER 189

Query: 548  DIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLEML 727
            ++VSWNT+IT F++ + +  A+ LF  M E++V++WT M+ G  ++ + + A  +F +M 
Sbjct: 190  NVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMP 249

Query: 728  TAGVKPNQATXXXXXXXXXXXXXXXEGQQI-HQIVSKTISQFDPSVNSALMSVYSKCGEI 904
                  N  +               E  ++  Q+  + +S ++  +   + +     G++
Sbjct: 250  VR----NVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQN-----GKL 300

Query: 905  AIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMH-LHGFKPNDVTYVGLLSA 1081
              A   F  +  K++V W  +I+ +   G  +EAL +F  M   +  KPN+ T+V +L A
Sbjct: 301  ERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGA 360

Query: 1082 CSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSP 1261
            CS      EG  + + +      EV  D  ++L+++  + G L+ A       +I     
Sbjct: 361  CSKLAALCEGQQIHQIISKTVYQEV-ADVVSALINMYSKCGELELARKIFDDGSIGHRDV 419

Query: 1262 SVWGALLGGCNVHG 1303
              W  ++     HG
Sbjct: 420  VSWNGMIAAYAHHG 433


>ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group] gi|62701919|gb|AAX92992.1|
            hypothetical protein LOC_Os11g24530 [Oryza sativa
            Japonica Group] gi|77550326|gb|ABA93123.1|
            pentatricopeptide, putative, expressed [Oryza sativa
            Japonica Group] gi|125534237|gb|EAY80785.1| hypothetical
            protein OsI_35965 [Oryza sativa Indica Group]
            gi|125577016|gb|EAZ18238.1| hypothetical protein
            OsJ_33779 [Oryza sativa Japonica Group]
            gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa
            Japonica Group]
          Length = 622

 Score =  547 bits (1409), Expect = e-153
 Identities = 259/453 (57%), Positives = 340/453 (75%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++++ Y R GML EAR LFDR DA++NVVTWTA+LSGYAR++ + EAE LFE M E+N 
Sbjct: 76   TAMVAAYARRGMLQEARVLFDRPDARRNVVTWTALLSGYARARRVDEAEALFEGMAERNV 135

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTML  Y   G++++A  LF RMP R+  SWN ++  + +SG L+ A ++F+ MP R
Sbjct: 136  VSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCGLVRSGSLERARKMFERMPVR 195

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DV+SWT+M++ L+ NG VD+A VLFD MPERNVVSWNAMISGY +N  +++AL+LF KMP
Sbjct: 196  DVMSWTTMISGLARNGSVDDAWVLFDAMPERNVVSWNAMISGYARNHRIEEALDLFTKMP 255

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
             RD+ SWN MITGFI+NKDL  AR LF+EM ++NV+TWT M+ G ++  Q+EMALK+F  
Sbjct: 256  IRDVASWNIMITGFIQNKDLKSARQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNC 315

Query: 722  MLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGE 901
            ML  G++PNQ T               EGQQ+HQ++ KT SQFD  V S LM++Y+KCGE
Sbjct: 316  MLVQGIQPNQVTFLGSLDACSNLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGE 375

Query: 902  IAIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGLLSA 1081
            I +AR +F+   +KDL+ WNG+IAAYAHHG G EA++L++NM  +G+KPND TYVGLLSA
Sbjct: 376  IRLARNVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSA 435

Query: 1082 CSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSP 1261
            CSH+GL DEGL +F+ M+ D SI VR++HY  LVDLC RAGRL++A   I    I P+S 
Sbjct: 436  CSHAGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSS 495

Query: 1262 SVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            +VW ALLGGCN HG+  IG+LAAK L+EAEP+N
Sbjct: 496  TVWSALLGGCNSHGNESIGDLAAKHLLEAEPDN 528



 Score =  153 bits (386), Expect = 2e-34
 Identities = 110/386 (28%), Positives = 179/386 (46%), Gaps = 38/386 (9%)
 Frame = +2

Query: 176  NCISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMP 355
            NCIS N   A  A    + ++             +W    +A   +GR+ +A RLFD MP
Sbjct: 24   NCISNNAAPAASAGVNHVQDS-------------NWRVAELAA--AGRVSDARRLFDGMP 68

Query: 356  ARDVISWTSMVAALSHNGRVDEARVLFDR------------------------------- 442
             RDV+SWT+MVAA +  G + EARVLFDR                               
Sbjct: 69   DRDVVSWTAMVAAYARRGMLQEARVLFDRPDARRNVVTWTALLSGYARARRVDEAEALFE 128

Query: 443  -MPERNVVSWNAMISGYVQNLGLDQALELFVKMPERDIVSWNTMITGFIKNKDLSRARGL 619
             M ERNVVSWN M+  Y     ++ A  LF +MP RD  SWN ++ G +++  L RAR +
Sbjct: 129  GMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCGLVRSGSLERARKM 188

Query: 620  FEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLEMLTAGVKPNQATXXXXXXXXXXXXXX 799
            FE M  ++V++WT MI+G   +   + A  +F  M    V    A               
Sbjct: 189  FERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPERNVVSWNA--------------M 234

Query: 800  XEGQQIHQIVSKTISQF------DPSVNSALMSVYSKCGEIAIARKLFELLGQKDLVCWN 961
              G   +  + + +  F      D +  + +++ + +  ++  AR+LF+ + +++++ W 
Sbjct: 235  ISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFDEMPKRNVITWT 294

Query: 962  GMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGLLSACSHSGLFDEGLNLFKCMMND 1141
             M+  Y      + AL LF  M + G +PN VT++G L ACS+     EG  + + +   
Sbjct: 295  TMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQVHQMICKT 354

Query: 1142 PSIEVREDHYASLVDLCGRAGRLKEA 1219
            PS +      ++L++L  + G ++ A
Sbjct: 355  PS-QFDTFVESTLMNLYAKCGEIRLA 379


>gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
          Length = 618

 Score =  547 bits (1409), Expect = e-153
 Identities = 259/453 (57%), Positives = 342/453 (75%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++++ Y R GMLH+ARALFDR DA++NVVTWTA+LSGYAR+  + EAE LF+RMPE+N 
Sbjct: 70   TALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFQRMPERNV 129

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTML  Y   G++ +A+ LF  MP R+  SWN ++ A+ +SG +D+A +LFD MP R
Sbjct: 130  VSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAALVRSGNMDKARKLFDRMPER 189

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            +V++WT+MVA ++ +G VDEAR LFD MPERNVVSWNAMISGY +N  +D+A +LF+KMP
Sbjct: 190  NVMAWTTMVAGIARSGSVDEARALFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMP 249

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
             RDI SWN MITGFI+++DL RA+ LF++M  +NV+TWT M+ G ++  Q+E AL++F  
Sbjct: 250  TRDIASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNG 309

Query: 722  MLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGE 901
            ML  G++PNQ T               EGQQ+HQ++ KT  QFD  + S LM++Y+KCGE
Sbjct: 310  MLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGE 369

Query: 902  IAIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGLLSA 1081
            I +ARK+F+L  +KD++ WNGMIAAYAHHG G EA++L+  M   G+KPNDVTYVGLLSA
Sbjct: 370  IRLARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSA 429

Query: 1082 CSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSP 1261
            CSHSGL DEGL +F+ M+ D SI VR++HY  L+DLC RAGRL +A   I  L + PSS 
Sbjct: 430  CSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSS- 488

Query: 1262 SVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            +VW ALLGGCN HG+  IG+LAA+ L+EAEPNN
Sbjct: 489  TVWNALLGGCNSHGNESIGDLAARNLLEAEPNN 521



 Score =  152 bits (383), Expect = 4e-34
 Identities = 101/373 (27%), Positives = 179/373 (47%), Gaps = 33/373 (8%)
 Frame = +2

Query: 284  NTIMIAMTQSGRLDEAYRLFDEMPARDVISWTSMVAALSHNGRVDEARVLFDRM-PERNV 460
            N  +  +  +GR+ +A RLFD  P RDV+SWT++VAA +  G + +AR LFDR    RNV
Sbjct: 39   NRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDRPDARRNV 98

Query: 461  VSWNAMISGYVQNLGLDQALELFVKMPERDIVSWNTMITGF------------------- 583
            V+W A++SGY +   +D+A  LF +MPER++VSWNTM+  +                   
Sbjct: 99   VTWTALLSGYARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVR 158

Query: 584  ------------IKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLEML 727
                        +++ ++ +AR LF+ M E+NV+ WT M+ G       + A  +F  M 
Sbjct: 159  DAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMP 218

Query: 728  TAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGEIA 907
               V    A                   + H +  K  ++   S N  +++ + +  ++ 
Sbjct: 219  ERNVVSWNAMISGYARNHRI-------DEAHDLFMKMPTRDIASWN-IMITGFIQDRDLE 270

Query: 908  IARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGLLSACS 1087
             A+ LF+ + +++++ W  M+  Y      + AL +F  M + G +PN VT++G + ACS
Sbjct: 271  RAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACS 330

Query: 1088 HSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSPSV 1267
            +     EG  + + M+   S +      ++L++L  + G ++ A    K  ++S     +
Sbjct: 331  NLAGLSEGQQVHQ-MICKTSFQFDTFIESTLMNLYAKCGEIRLAR---KVFDLSKEKDVI 386

Query: 1268 -WGALLGGCNVHG 1303
             W  ++     HG
Sbjct: 387  SWNGMIAAYAHHG 399


>ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g35030, mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  546 bits (1408), Expect = e-153
 Identities = 270/456 (59%), Positives = 341/456 (74%), Gaps = 3/456 (0%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++I+GYI+CGM+ EA+ LFDR DA KNVVTWTA++SGY R   I EA  LF+ MP KN 
Sbjct: 101  TAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNV 160

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            ISWNTM+  YA  G +D+A  LF  MP+RNVVSWNT++ A  Q  R+DEA  LF+ MP R
Sbjct: 161  ISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPER 220

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DVISWT+MVA LS NGR+D+AR+LFD+MP RNVVSWN MI GY QN+ LD+A +LF +MP
Sbjct: 221  DVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMP 280

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
            ER++ SWNTMITGFI+N  L RA   F +M  KNVVTWTA+I+G V+D ++E ALK+F E
Sbjct: 281  ERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSE 340

Query: 722  MLTA-GVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCG 898
            M  A  VKPN+ T               EGQQIHQI+SKT+ Q    V SAL+++YSKCG
Sbjct: 341  MQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCG 400

Query: 899  EIAIARKLFE--LLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGL 1072
            E+ +ARK+F+   +G +D+V WNGMIAAYAHHG+G +A++LF  M   GF+P++VTY+ L
Sbjct: 401  ELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIAL 460

Query: 1073 LSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISP 1252
            LSACSH+GL DEGL LF+ ++ D SI++REDH+  LVDL GRAGRL+EA  FIKGL + P
Sbjct: 461  LSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKP 520

Query: 1253 SSPSVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            S+ SVW ALL GCNVHG + +G L A+KL+E EP N
Sbjct: 521  SA-SVWAALLAGCNVHGHIDLGKLTAEKLLETEPEN 555



 Score =  193 bits (491), Expect = 1e-46
 Identities = 112/374 (29%), Positives = 195/374 (52%), Gaps = 3/374 (0%)
 Frame = +2

Query: 191  NTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPA-RDV 367
            N ++    + G++ EA  +F  MPDR+VVSW  ++    + G ++EA  LFD   A ++V
Sbjct: 70   NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNV 129

Query: 368  ISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMPER 547
            ++WT++V+      R++EAR LFD MP +NV+SWN MI GY +   +DQAL+LF  MPER
Sbjct: 130  VTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPER 189

Query: 548  DIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLEML 727
            ++VSWNT+IT F++ + +  A+ LF  M E++V++WT M+ G  ++ + + A  +F +M 
Sbjct: 190  NVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMP 249

Query: 728  TAGVKPNQATXXXXXXXXXXXXXXXEGQQI-HQIVSKTISQFDPSVNSALMSVYSKCGEI 904
                  N  +               E  ++  Q+  + +S ++  +   + +     G++
Sbjct: 250  VR----NVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQN-----GKL 300

Query: 905  AIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMH-LHGFKPNDVTYVGLLSA 1081
              A   F  +  K++V W  +I+ +   G  +EAL +F  M   +  KPN+ T+V +L A
Sbjct: 301  ERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGA 360

Query: 1082 CSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSP 1261
            CS      EG  + + +      EV  D  ++L+++  + G L+ A       +I     
Sbjct: 361  CSKLAALCEGQQIHQIISKTVYQEV-ADVVSALINMYSKCGELELARKIFDDGSIGHRDV 419

Query: 1262 SVWGALLGGCNVHG 1303
              W  ++     HG
Sbjct: 420  VSWNGMIAAYAHHG 433


>ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
            mitochondrial-like isoform X2 [Glycine max]
            gi|571479769|ref|XP_006587961.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g35030,
            mitochondrial-like isoform X3 [Glycine max]
            gi|571479771|ref|XP_003533693.2| PREDICTED:
            pentatricopeptide repeat-containing protein At2g35030,
            mitochondrial-like isoform X1 [Glycine max]
          Length = 618

 Score =  545 bits (1403), Expect = e-152
 Identities = 269/456 (58%), Positives = 346/456 (75%), Gaps = 3/456 (0%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++I+GY++CGM+ EAR LFDR DA+KNVVTWTAM++GY +   ++EAE LF  MP +N 
Sbjct: 73   TTMITGYLKCGMIREARKLFDRWDAKKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNV 132

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTM+  YA NG   +A  LF RMP+RNVVSWNTI+ A+ Q GR+++A RLFD+M  R
Sbjct: 133  VSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDR 192

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DV+SWT+MVA L+ NGRV++AR LFD+MP RNVVSWNAMI+GY QN  LD+AL+LF +MP
Sbjct: 193  DVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMP 252

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
            ERD+ SWNTMITGFI+N +L+RA  LF EM+EKNV+TWTAM+TG V+   +E AL++F++
Sbjct: 253  ERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIK 312

Query: 722  ML-TAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCG 898
            ML T  +KPN  T               EGQQIHQ++SKT+ Q    V SAL+++YSKCG
Sbjct: 313  MLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCG 372

Query: 899  EIAIARKLFE--LLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGL 1072
            E+  ARK+F+  LL Q+DL+ WNGMIAAYAHHG G+EA+NLF  M   G   NDVT+VGL
Sbjct: 373  ELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVCANDVTFVGL 432

Query: 1073 LSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISP 1252
            L+ACSH+GL +EG   F  ++ + SI++REDHYA LVDLCGRAGRLKEAS+ I+GL    
Sbjct: 433  LTACSHTGLVEEGFKYFDEILKNRSIQLREDHYACLVDLCGRAGRLKEASNIIEGLG-EE 491

Query: 1253 SSPSVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
               +VWGALL GCNVHG+  IG L A+K+++ EP N
Sbjct: 492  VPLTVWGALLAGCNVHGNADIGKLVAEKILKIEPQN 527



 Score =  182 bits (462), Expect = 3e-43
 Identities = 112/373 (30%), Positives = 193/373 (51%), Gaps = 2/373 (0%)
 Frame = +2

Query: 191  NTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPA-RDV 367
            N  ++     G++D A  +F  MP+R++  W T++    + G + EA +LFD   A ++V
Sbjct: 42   NLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNV 101

Query: 368  ISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMPER 547
            ++WT+MV       +V EA  LF  MP RNVVSWN M+ GY +N    QAL+LF +MPER
Sbjct: 102  VTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPER 161

Query: 548  DIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLEML 727
            ++VSWNT+IT  ++   +  A+ LF++M++++VV+WT M+ G  ++ + E A  +F +M 
Sbjct: 162  NVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQMP 221

Query: 728  TAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGEIA 907
               V    A                   +  Q+  +   +  PS N+ +++ + + GE+ 
Sbjct: 222  VRNVVSWNAMITGYAQNRRL-------DEALQLFQRMPERDMPSWNT-MITGFIQNGELN 273

Query: 908  IARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLF-RNMHLHGFKPNDVTYVGLLSAC 1084
             A KLF  + +K+++ W  M+  Y  HG  +EAL +F + +  +  KPN  T+V +L AC
Sbjct: 274  RAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGAC 333

Query: 1085 SHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSPS 1264
            S      EG  + + M++    +      ++L+++  + G L  A        +S     
Sbjct: 334  SDLAGLTEGQQIHQ-MISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLI 392

Query: 1265 VWGALLGGCNVHG 1303
             W  ++     HG
Sbjct: 393  SWNGMIAAYAHHG 405


>gb|ESW33429.1| hypothetical protein PHAVU_001G068400g [Phaseolus vulgaris]
          Length = 616

 Score =  541 bits (1393), Expect = e-151
 Identities = 268/456 (58%), Positives = 341/456 (74%), Gaps = 3/456 (0%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++I+GY++CGM+ EAR LFDR DA+KNVVTWTAM+ GY R   ++EAE LF  MP +N 
Sbjct: 70   TTMINGYLKCGMIREARKLFDRLDAKKNVVTWTAMIKGYIRLNQVKEAERLFYEMPLRNV 129

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTM+  YA NG   +A  LF RMP+RNVVSWNTI+  + Q G++D+A RLFD+M  R
Sbjct: 130  VSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITTLVQCGKVDDAQRLFDQMKER 189

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DV+SWT+MVA LS NGRV++AR LFD+MP RNVVSWN M++GY QN  L++ALELF +MP
Sbjct: 190  DVVSWTTMVAGLSKNGRVEDARALFDQMPVRNVVSWNVMVTGYAQNGRLNEALELFQRMP 249

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
            ER++ SWNTMITGFI+N +L+ A  LF EM  KNV+TWTAM+TG V+   +E A+K+F +
Sbjct: 250  ERNMPSWNTMITGFIQNGELNHAEKLFREMRVKNVITWTAMMTGYVQHGLSEEAVKVFNK 309

Query: 722  MLTA-GVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCG 898
            ML A G+KPN  T               EGQQIHQ++SKTI Q    V SAL+++YSKCG
Sbjct: 310  MLAADGLKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTIFQDSTYVVSALINMYSKCG 369

Query: 899  EIAIARKLFE--LLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGL 1072
            E+ IARK+F+  LL Q+DL+ WNGMIAAYAHHG G+EA+NLF  M   G   NDVT+VGL
Sbjct: 370  ELRIARKMFDDGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVPANDVTFVGL 429

Query: 1073 LSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISP 1252
            L+ACSH+GL +EGL  F  ++ + SI++REDHYA L+DLCGRAGRLKEA   I+GL    
Sbjct: 430  LTACSHTGLIEEGLKYFDEILKNRSIQLREDHYACLIDLCGRAGRLKEAFDIIEGLG-EE 488

Query: 1253 SSPSVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            +S +VWGALL GCNVHG+  IG L A+K++  EP N
Sbjct: 489  ASLTVWGALLAGCNVHGNADIGKLVAEKILIIEPQN 524



 Score =  183 bits (464), Expect = 2e-43
 Identities = 117/393 (29%), Positives = 202/393 (51%), Gaps = 2/393 (0%)
 Frame = +2

Query: 131  LIREAEELFERMPEKNCISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQ 310
            +IR    +      K C   N ++    E+G++D+A  +F +M DR++  W T++    +
Sbjct: 22   IIRLTSTVSNHPEMKRC---NLLIFRLCEDGKIDDARKVFDKMLDRDIGLWTTMINGYLK 78

Query: 311  SGRLDEAYRLFDEMPA-RDVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISG 487
             G + EA +LFD + A ++V++WT+M+       +V EA  LF  MP RNVVSWN M+ G
Sbjct: 79   CGMIREARKLFDRLDAKKNVVTWTAMIKGYIRLNQVKEAERLFYEMPLRNVVSWNTMVDG 138

Query: 488  YVQNLGLDQALELFVKMPERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMI 667
            Y +N    QAL+LF +MPER++VSWNT+IT  ++   +  A+ LF++M+E++VV+WT M+
Sbjct: 139  YARNGLTQQALDLFRRMPERNVVSWNTIITTLVQCGKVDDAQRLFDQMKERDVVSWTTMV 198

Query: 668  TGCVEDQQNEMALKMFLEMLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQ 847
             G  ++ + E A  +F +M       N  +               E  ++ Q   +   +
Sbjct: 199  AGLSKNGRVEDARALFDQMPVR----NVVSWNVMVTGYAQNGRLNEALELFQ---RMPER 251

Query: 848  FDPSVNSALMSVYSKCGEIAIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNM 1027
              PS N+ +++ + + GE+  A KLF  +  K+++ W  M+  Y  HG  +EA+ +F  M
Sbjct: 252  NMPSWNT-MITGFIQNGELNHAEKLFREMRVKNVITWTAMMTGYVQHGLSEEAVKVFNKM 310

Query: 1028 -HLHGFKPNDVTYVGLLSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAG 1204
                G KPN  T+V +L ACS      EG  + + M++    +      ++L+++  + G
Sbjct: 311  LAADGLKPNTGTFVTVLGACSDLAGLTEGQQIHQ-MISKTIFQDSTYVVSALINMYSKCG 369

Query: 1205 RLKEASSFIKGLNISPSSPSVWGALLGGCNVHG 1303
             L+ A        +       W  ++     HG
Sbjct: 370  ELRIARKMFDDGLLRQRDLISWNGMIAAYAHHG 402


>ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
            mitochondrial-like [Brachypodium distachyon]
          Length = 618

 Score =  540 bits (1391), Expect = e-151
 Identities = 259/453 (57%), Positives = 340/453 (75%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++++ Y   GMLH+ARALFDR DA++NVVTWTA+LSGYAR+  + EAE LF RMPE+N 
Sbjct: 70   TALVAAYACQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFGRMPERNV 129

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTML  Y  +G++ +A  LF  MP R+  SWN ++ A+ +SG +D+A +LFD MP R
Sbjct: 130  VSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNILLAALVRSGNIDKARKLFDRMPER 189

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            +V++WT+MVA ++ +G V+EAR LFD MPERNVVSWNAMISGY +N  +D+A +LF+KMP
Sbjct: 190  NVMAWTTMVAGIARSGSVNEARALFDGMPERNVVSWNAMISGYARNHMIDEAHDLFMKMP 249

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
             RDI SWN MITGFI+NK+L RA+ LF++M  +NVVTWT M+ G ++  Q+E AL++F  
Sbjct: 250  TRDIASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNG 309

Query: 722  MLTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGE 901
            ML  G++PNQ T               EGQQ+HQ++ KT  QFD  + S LM++Y+KCGE
Sbjct: 310  MLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGE 369

Query: 902  IAIARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGLLSA 1081
            I +ARK+F L  +KD++ WNGMIAAYAHHG G EA++L+  M  +G+KPNDVTYVGLLSA
Sbjct: 370  IILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSA 429

Query: 1082 CSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSP 1261
            CSHSGL DEGL +F+ M+ D SI VR++HY  L+DLC RAGRL +A   I  L + PSS 
Sbjct: 430  CSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSS- 488

Query: 1262 SVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            +VW ALLGGCN HG+  IG+LAA+ L+EAEPNN
Sbjct: 489  TVWNALLGGCNSHGNESIGDLAARNLLEAEPNN 521



 Score =  152 bits (383), Expect = 4e-34
 Identities = 104/373 (27%), Positives = 169/373 (45%), Gaps = 33/373 (8%)
 Frame = +2

Query: 284  NTIMIAMTQSGRLDEAYRLFDEMPARDVISWTSMVAA----------------------- 394
            N  +  +  +GR+ +A RLFD  P RDV+SWT++VAA                       
Sbjct: 39   NRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDRPDARRNV 98

Query: 395  ---------LSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMPER 547
                      +  GRVDEA  LF RMPERNVVSWN M+  Y  +  +  A  LF  MP R
Sbjct: 99   VTWTALLSGYARAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVR 158

Query: 548  DIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLEML 727
            D  SWN ++   +++ ++ +AR LF+ M E+NV+ WT M+ G         A  +F  M 
Sbjct: 159  DAGSWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMP 218

Query: 728  TAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGEIA 907
               V    A                   + H +  K  ++   S N  +++ + +   + 
Sbjct: 219  ERNVVSWNAMISGYARNHMI-------DEAHDLFMKMPTRDIASWN-IMITGFIQNKNLE 270

Query: 908  IARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGLLSACS 1087
             A++LF+ + ++++V W  M+  Y      + AL LF  M + G +PN VT++G + ACS
Sbjct: 271  RAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACS 330

Query: 1088 HSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSPSV 1267
            +     EG  + + +   P  +      ++L++L  + G +  A    K  N+S     +
Sbjct: 331  NLAGLSEGQQVHQMICKTP-FQFDTFIESTLMNLYAKCGEIILAR---KVFNLSKEKDVI 386

Query: 1268 -WGALLGGCNVHG 1303
             W  ++     HG
Sbjct: 387  SWNGMIAAYAHHG 399


>ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g35030, mitochondrial-like [Cicer arietinum]
          Length = 665

 Score =  539 bits (1388), Expect = e-150
 Identities = 266/456 (58%), Positives = 341/456 (74%), Gaps = 3/456 (0%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++ISGYI+CGM+ EAR LFDR+DA+KNV+ WTAM+SGY +   I EAE LF  MP +N 
Sbjct: 84   TTMISGYIKCGMIKEARKLFDRSDAEKNVIVWTAMVSGYVKLNRIEEAERLFYEMPVRNV 143

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTM+  YA NG+  EA  LF RMP+RNVVSWNTI+ A+  SGR+D+A  +F +M  R
Sbjct: 144  VSWNTMIDGYARNGRTQEALDLFRRMPERNVVSWNTIITALAHSGRIDDAQGIFSKMQER 203

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DV+SWT+MVA LS NGR+D+AR LFDRMP RNVVSWNAMI+GY QN  LD+AL+LF +MP
Sbjct: 204  DVVSWTTMVAGLSKNGRIDDARELFDRMPVRNVVSWNAMITGYAQNGRLDEALKLFERMP 263

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
            ERD+ SWNTMITGFI+N DL+RA  LF+EM +KNV+TWT+M+TG V+   +E ALK+F +
Sbjct: 264  ERDMPSWNTMITGFIQNGDLNRAEKLFDEMPQKNVITWTSMMTGYVQHGLSEEALKIFNK 323

Query: 722  M-LTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCG 898
            M    G+KP   T               EGQQIHQ++SKT+ Q +  V SAL+++YSKCG
Sbjct: 324  MQANDGLKPTTGTFVTVLGACSDLAGLIEGQQIHQMISKTVFQENNHVVSALINMYSKCG 383

Query: 899  EIAIARKLFE--LLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGL 1072
            E+  ARK+F+  L GQ DL+ WNGMIAAYAHHG+G EA++L+  M   GF+ NDVT+VGL
Sbjct: 384  ELQAARKMFDDGLSGQMDLISWNGMIAAYAHHGSGTEAISLYNKMVELGFQANDVTFVGL 443

Query: 1073 LSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISP 1252
            L+ACSH+GL +EGL  F  ++ +  I+VREDHY  L+DLCGRAGRLKEA + I+GL    
Sbjct: 444  LTACSHAGLVEEGLKYFDELLENRYIQVREDHYTCLIDLCGRAGRLKEAFNVIEGLG-KD 502

Query: 1253 SSPSVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
            +S ++W ALL GCNVHG+  IG L A K+++ EP N
Sbjct: 503  ASLTIWAALLAGCNVHGNADIGKLVADKILKIEPQN 538



 Score =  189 bits (479), Expect = 3e-45
 Identities = 116/374 (31%), Positives = 198/374 (52%), Gaps = 3/374 (0%)
 Frame = +2

Query: 191  NTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPA-RDV 367
            N  ++   + G++DEA  +F  M +R++  W T++    + G + EA +LFD   A ++V
Sbjct: 53   NFFISSLCKQGKIDEARKVFDEMSERDICLWTTMISGYIKCGMIKEARKLFDRSDAEKNV 112

Query: 368  ISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMPER 547
            I WT+MV+      R++EA  LF  MP RNVVSWN MI GY +N    +AL+LF +MPER
Sbjct: 113  IVWTAMVSGYVKLNRIEEAERLFYEMPVRNVVSWNTMIDGYARNGRTQEALDLFRRMPER 172

Query: 548  DIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLEML 727
            ++VSWNT+IT    +  +  A+G+F +M+E++VV+WT M+ G  ++ + + A ++F  M 
Sbjct: 173  NVVSWNTIITALAHSGRIDDAQGIFSKMQERDVVSWTTMVAGLSKNGRIDDARELFDRMP 232

Query: 728  TAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGEIA 907
               V    A                   +  ++  +   +  PS N+ +++ + + G++ 
Sbjct: 233  VRNVVSWNAMITGYAQNGRL-------DEALKLFERMPERDMPSWNT-MITGFIQNGDLN 284

Query: 908  IARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLH-GFKPNDVTYVGLLSAC 1084
             A KLF+ + QK+++ W  M+  Y  HG  +EAL +F  M  + G KP   T+V +L AC
Sbjct: 285  RAEKLFDEMPQKNVITWTSMMTGYVQHGLSEEALKIFNKMQANDGLKPTTGTFVTVLGAC 344

Query: 1085 SHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEA-SSFIKGLNISPSSP 1261
            S      EG  + + M++    +      ++L+++  + G L+ A   F  GL+      
Sbjct: 345  SDLAGLIEGQQIHQ-MISKTVFQENNHVVSALINMYSKCGELQAARKMFDDGLSGQMDLI 403

Query: 1262 SVWGALLGGCNVHG 1303
            S W  ++     HG
Sbjct: 404  S-WNGMIAAYAHHG 416


>ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355478803|gb|AES60006.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 891

 Score =  535 bits (1379), Expect = e-149
 Identities = 265/456 (58%), Positives = 334/456 (73%), Gaps = 3/456 (0%)
 Frame = +2

Query: 2    TSIISGYIRCGMLHEARALFDRADAQKNVVTWTAMLSGYARSKLIREAEELFERMPEKNC 181
            T++ISGYI+CG+++EAR LFDR DAQK+V+ WTAM+SGY +   I EAE LF  MP +N 
Sbjct: 80   TTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNV 139

Query: 182  ISWNTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPAR 361
            +SWNTM+  YA NG+  EA  LF RMP+RNVVSWNT+M A+   GR+D+A RLF+EM  R
Sbjct: 140  VSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRER 199

Query: 362  DVISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMP 541
            DV+SWT+MVA LS NGRVD AR +FD+MP RNVVSWNAMI+GY QN   D+AL+LF +MP
Sbjct: 200  DVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMP 259

Query: 542  ERDIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLE 721
            ERD+ SWNTM+TGFI+N DL+RA  LF  M +KNV+TWTAM+TG V+   +E ALK+F +
Sbjct: 260  ERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNK 319

Query: 722  M-LTAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCG 898
            M    G+KP   T               EGQQIHQ++SKT+ Q    V SAL+++YSKCG
Sbjct: 320  MQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCG 379

Query: 899  EIAIARKLFE--LLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLHGFKPNDVTYVGL 1072
            +  +A+K+F+  L G  DL+ WNGMIAAYAHHG G EA+NLF  M   GF+ NDVTYVGL
Sbjct: 380  DFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGL 439

Query: 1073 LSACSHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISP 1252
            L+ACSH+GLFDEG   F  ++ +  I+VREDHY  L+DLCGRAGRL EA + I+GL    
Sbjct: 440  LTACSHAGLFDEGFKYFDELLKNRYIQVREDHYTCLIDLCGRAGRLDEALNIIEGLG-KE 498

Query: 1253 SSPSVWGALLGGCNVHGDVKIGNLAAKKLMEAEPNN 1360
             S S+WGALL GC+VHG+  IG L A K+++ EP N
Sbjct: 499  VSLSLWGALLAGCSVHGNADIGKLVADKVLKMEPEN 534



 Score =  174 bits (442), Expect = 6e-41
 Identities = 110/373 (29%), Positives = 185/373 (49%), Gaps = 2/373 (0%)
 Frame = +2

Query: 191  NTMLACYAENGQLDEAFHLFTRMPDRNVVSWNTIMIAMTQSGRLDEAYRLFDEMPA-RDV 367
            N  ++     G+++EA  +F  M  R+   W T++    + G ++EA +LFD   A + V
Sbjct: 49   NYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSV 108

Query: 368  ISWTSMVAALSHNGRVDEARVLFDRMPERNVVSWNAMISGYVQNLGLDQALELFVKMPER 547
            I WT+MV+      R++EA  LF+ MP RNVVSWN MI GY +N    +AL+LF +MPER
Sbjct: 109  IVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPER 168

Query: 548  DIVSWNTMITGFIKNKDLSRARGLFEEMEEKNVVTWTAMITGCVEDQQNEMALKMFLEML 727
            ++VSWNT++T       +  A  LF EM E++VV+WT M+ G  ++ + + A ++F +M 
Sbjct: 169  NVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMP 228

Query: 728  TAGVKPNQATXXXXXXXXXXXXXXXEGQQIHQIVSKTISQFDPSVNSALMSVYSKCGEIA 907
               V    A                   +  ++  +   +  PS N+ +++ + + G++ 
Sbjct: 229  IRNVVSWNAMIAGYAQNGRF-------DEALKLFERMPERDMPSWNT-MVTGFIQNGDLN 280

Query: 908  IARKLFELLGQKDLVCWNGMIAAYAHHGNGQEALNLFRNMHLH-GFKPNDVTYVGLLSAC 1084
             A +LF  + QK+++ W  M+  Y  HG  +EAL LF  M  + G KP   T+V +L AC
Sbjct: 281  RAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGAC 340

Query: 1085 SHSGLFDEGLNLFKCMMNDPSIEVREDHYASLVDLCGRAGRLKEASSFIKGLNISPSSPS 1264
            S      EG  + + M++    +      ++L+++  + G    A               
Sbjct: 341  SDLAGLPEGQQIHQ-MISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLI 399

Query: 1265 VWGALLGGCNVHG 1303
             W  ++     HG
Sbjct: 400  AWNGMIAAYAHHG 412