BLASTX nr result

ID: Zingiber23_contig00023028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00023028
         (264 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT25274.1| ATP-dependent RNA helicase DHX8 [Aegilops tauschii]    142   6e-32
gb|EMS56143.1| ATP-dependent RNA helicase DHX8 [Triticum urartu]      142   6e-32
dbj|BAJ93529.1| predicted protein [Hordeum vulgare subsp. vulgare]    142   6e-32
ref|XP_006656727.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...   141   8e-32
ref|XP_003577484.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...   140   2e-31
dbj|BAD35264.1| putative RNA helicase [Oryza sativa Japonica Gro...   140   2e-31
gb|EAZ36111.1| hypothetical protein OsJ_20423 [Oryza sativa Japo...   140   2e-31
gb|EAY99985.1| hypothetical protein OsI_21989 [Oryza sativa Indi...   140   2e-31
ref|XP_002441617.1| hypothetical protein SORBIDRAFT_09g030450 [S...   139   5e-31
ref|NP_001147775.1| ATP-dependent RNA helicase DHX8 [Zea mays] g...   137   1e-30
ref|XP_006839060.1| hypothetical protein AMTR_s00090p00083520 [A...   137   2e-30
ref|XP_004964596.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...   134   2e-29
ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helica...   129   3e-28
emb|CBI16803.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_004170072.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   123   2e-26
ref|XP_004152927.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   123   2e-26
ref|XP_006484223.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...   122   5e-26
gb|EXB44854.1| Putative ATP-dependent RNA helicase DHX33 [Morus ...   121   9e-26
ref|XP_006437910.1| hypothetical protein CICLE_v10030826mg [Citr...   120   1e-25
ref|XP_004246637.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...   119   3e-25

>gb|EMT25274.1| ATP-dependent RNA helicase DHX8 [Aegilops tauschii]
          Length = 732

 Score =  142 bits (357), Expect = 6e-32
 Identities = 69/87 (79%), Positives = 78/87 (89%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LIVV+MLSVESIF+ PREKLEEARAARKSF S EGDHIT++NVYR +A+ LEK+K AN K
Sbjct: 538 LIVVSMLSVESIFFTPREKLEEARAARKSFESSEGDHITLVNVYRAAAECLEKSKNANAK 597

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EKT+EK LN+WC ENFINYRSLRHARD
Sbjct: 598 EKTMEKALNRWCFENFINYRSLRHARD 624


>gb|EMS56143.1| ATP-dependent RNA helicase DHX8 [Triticum urartu]
          Length = 696

 Score =  142 bits (357), Expect = 6e-32
 Identities = 69/87 (79%), Positives = 78/87 (89%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LIVV+MLSVESIF+ PREKLEEARAARKSF S EGDHIT++NVYR +A+ LEK+K AN K
Sbjct: 502 LIVVSMLSVESIFFTPREKLEEARAARKSFESSEGDHITLVNVYRAAAECLEKSKNANAK 561

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EKT+EK LN+WC ENFINYRSLRHARD
Sbjct: 562 EKTMEKALNRWCFENFINYRSLRHARD 588


>dbj|BAJ93529.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 697

 Score =  142 bits (357), Expect = 6e-32
 Identities = 69/87 (79%), Positives = 78/87 (89%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LIVV+MLSVESIF+ PREKLEEARAARKSF S EGDHIT++NVYR +A+ LEK+K AN K
Sbjct: 503 LIVVSMLSVESIFFTPREKLEEARAARKSFESSEGDHITLVNVYRAAAECLEKSKNANAK 562

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EKT+EK LN+WC ENFINYRSLRHARD
Sbjct: 563 EKTMEKALNRWCFENFINYRSLRHARD 589


>ref|XP_006656727.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Oryza brachyantha]
          Length = 723

 Score =  141 bits (356), Expect = 8e-32
 Identities = 68/87 (78%), Positives = 78/87 (89%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LIVV+MLSVESIF+ PR+KLEEARAARKSF S EGDHIT++NVYR +A+ LEK+K AN K
Sbjct: 529 LIVVSMLSVESIFFTPRDKLEEARAARKSFESSEGDHITLVNVYRAAAECLEKSKNANAK 588

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EKT+EK L +WCRENFINYRSLRHARD
Sbjct: 589 EKTMEKALQRWCRENFINYRSLRHARD 615


>ref|XP_003577484.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Brachypodium
           distachyon]
          Length = 665

 Score =  140 bits (353), Expect = 2e-31
 Identities = 68/87 (78%), Positives = 77/87 (88%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LIVV+MLSVESIF+ PREKLEEARAARKSF S EGDHIT++NVYR + + LEK+K AN K
Sbjct: 471 LIVVSMLSVESIFFTPREKLEEARAARKSFESSEGDHITLVNVYRAALECLEKSKSANAK 530

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EKT+EK LN+WC ENFINYRSLRHARD
Sbjct: 531 EKTMEKALNRWCWENFINYRSLRHARD 557


>dbj|BAD35264.1| putative RNA helicase [Oryza sativa Japonica Group]
           gi|51091123|dbj|BAD35820.1| putative RNA helicase [Oryza
           sativa Japonica Group]
          Length = 698

 Score =  140 bits (352), Expect = 2e-31
 Identities = 68/87 (78%), Positives = 77/87 (88%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LIVV+MLSVESIF+ PREKLEEARAARKSF S EGDHIT++NVYR + + LEK+K AN K
Sbjct: 504 LIVVSMLSVESIFFSPREKLEEARAARKSFESSEGDHITLVNVYRAAKECLEKSKNANAK 563

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EKT+EK LN+WCRENFINYRSLRHA D
Sbjct: 564 EKTMEKALNRWCRENFINYRSLRHACD 590


>gb|EAZ36111.1| hypothetical protein OsJ_20423 [Oryza sativa Japonica Group]
          Length = 330

 Score =  140 bits (352), Expect = 2e-31
 Identities = 68/87 (78%), Positives = 77/87 (88%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LIVV+MLSVESIF+ PREKLEEARAARKSF S EGDHIT++NVYR + + LEK+K AN K
Sbjct: 136 LIVVSMLSVESIFFSPREKLEEARAARKSFESSEGDHITLVNVYRAAKECLEKSKNANAK 195

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EKT+EK LN+WCRENFINYRSLRHA D
Sbjct: 196 EKTMEKALNRWCRENFINYRSLRHACD 222


>gb|EAY99985.1| hypothetical protein OsI_21989 [Oryza sativa Indica Group]
          Length = 698

 Score =  140 bits (352), Expect = 2e-31
 Identities = 68/87 (78%), Positives = 77/87 (88%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LIVV+MLSVESIF+ PREKLEEARAARKSF S EGDHIT++NVYR + + LEK+K AN K
Sbjct: 504 LIVVSMLSVESIFFSPREKLEEARAARKSFESSEGDHITLVNVYRAAKECLEKSKNANAK 563

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EKT+EK LN+WCRENFINYRSLRHA D
Sbjct: 564 EKTMEKALNRWCRENFINYRSLRHACD 590


>ref|XP_002441617.1| hypothetical protein SORBIDRAFT_09g030450 [Sorghum bicolor]
           gi|241946902|gb|EES20047.1| hypothetical protein
           SORBIDRAFT_09g030450 [Sorghum bicolor]
          Length = 485

 Score =  139 bits (349), Expect = 5e-31
 Identities = 67/87 (77%), Positives = 77/87 (88%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LIVV+MLSVESIF+  REKLEEARAARK F S EGDHIT++NVYR +A+ LEK++ AN K
Sbjct: 291 LIVVSMLSVESIFFSVREKLEEARAARKGFESAEGDHITLVNVYRAAAECLEKSRNANAK 350

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EKT+EK LN+WCRENFINYRSLRHARD
Sbjct: 351 EKTMEKALNRWCRENFINYRSLRHARD 377


>ref|NP_001147775.1| ATP-dependent RNA helicase DHX8 [Zea mays]
           gi|195613710|gb|ACG28685.1| ATP-dependent RNA helicase
           DHX8 [Zea mays] gi|413951431|gb|AFW84080.1|
           ATP-dependent RNA helicase DHX8 [Zea mays]
          Length = 692

 Score =  137 bits (346), Expect = 1e-30
 Identities = 67/87 (77%), Positives = 77/87 (88%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LIVV+MLSVESIF+  REKLEEARAARK F S EGDHIT++NVYR +A+ LEK++ AN K
Sbjct: 498 LIVVSMLSVESIFFSVREKLEEARAARKRFESSEGDHITLVNVYRGAAECLEKSRNANAK 557

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EKT+EK LN+WCRENFINYRSLRHARD
Sbjct: 558 EKTMEKALNRWCRENFINYRSLRHARD 584


>ref|XP_006839060.1| hypothetical protein AMTR_s00090p00083520 [Amborella trichopoda]
           gi|548841576|gb|ERN01629.1| hypothetical protein
           AMTR_s00090p00083520 [Amborella trichopoda]
          Length = 733

 Score =  137 bits (344), Expect = 2e-30
 Identities = 66/90 (73%), Positives = 80/90 (88%), Gaps = 3/90 (3%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIAN-- 89
           LI+V+MLSVESIFY PREK+EEARAARK F+S EGDHIT+LNVYR S +SLEK+++ N  
Sbjct: 536 LIIVSMLSVESIFYSPREKMEEARAARKCFASQEGDHITLLNVYRASVESLEKSRMGNQE 595

Query: 88  -VKEKTLEKKLNKWCRENFINYRSLRHARD 2
            +++KT+EKKLNKWCRENFIN RSLRHAR+
Sbjct: 596 TIRDKTVEKKLNKWCRENFINSRSLRHARE 625


>ref|XP_004964596.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Setaria italica]
          Length = 696

 Score =  134 bits (336), Expect = 2e-29
 Identities = 64/87 (73%), Positives = 76/87 (87%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LIVV+MLSVESIF+ PREKLEEARAARK F S EGDHIT++NVYR +A+ LEK+K AN K
Sbjct: 502 LIVVSMLSVESIFFCPREKLEEARAARKGFESSEGDHITLVNVYRAAAECLEKSKNANAK 561

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           E+T+EK LN+WC+ENFIN RSL+HA D
Sbjct: 562 ERTMEKALNRWCKENFINNRSLKHALD 588


>ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helicase DHX33-like [Vitis
           vinifera]
          Length = 713

 Score =  129 bits (325), Expect = 3e-28
 Identities = 67/87 (77%), Positives = 72/87 (82%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LI VAMLSVESIFY PREKLEEAR A K FSSPEGDHIT++NVYR S + +EK K  N K
Sbjct: 520 LIAVAMLSVESIFYTPREKLEEARTAMKCFSSPEGDHITLINVYRASDEFVEKIKQGNDK 579

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EKT EKKL KWC+ENFIN RSLRHARD
Sbjct: 580 EKT-EKKLRKWCKENFINSRSLRHARD 605


>emb|CBI16803.3| unnamed protein product [Vitis vinifera]
          Length = 1408

 Score =  129 bits (325), Expect = 3e-28
 Identities = 67/87 (77%), Positives = 72/87 (82%)
 Frame = -3

Query: 262  LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
            LI VAMLSVESIFY PREKLEEAR A K FSSPEGDHIT++NVYR S + +EK K  N K
Sbjct: 1215 LIAVAMLSVESIFYTPREKLEEARTAMKCFSSPEGDHITLINVYRASDEFVEKIKQGNDK 1274

Query: 82   EKTLEKKLNKWCRENFINYRSLRHARD 2
            EKT EKKL KWC+ENFIN RSLRHARD
Sbjct: 1275 EKT-EKKLRKWCKENFINSRSLRHARD 1300


>ref|XP_004170072.1| PREDICTED: ATP-dependent RNA helicase dhx8-like, partial [Cucumis
           sativus]
          Length = 694

 Score =  123 bits (309), Expect = 2e-26
 Identities = 62/87 (71%), Positives = 70/87 (80%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LI V+MLSVESIFY PREK EEARA  K FSSPEGDH+T++NVYR++ D L K K+   K
Sbjct: 501 LITVSMLSVESIFYHPREKQEEARAKMKCFSSPEGDHLTLINVYRSAVDFLNKKKLELSK 560

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EK LEK L KWC+ENFIN RSLRHARD
Sbjct: 561 EK-LEKSLRKWCKENFINSRSLRHARD 586


>ref|XP_004152927.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Cucumis sativus]
          Length = 709

 Score =  123 bits (309), Expect = 2e-26
 Identities = 62/87 (71%), Positives = 70/87 (80%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LI V+MLSVESIFY PREK EEARA  K FSSPEGDH+T++NVYR++ D L K K+   K
Sbjct: 516 LITVSMLSVESIFYHPREKQEEARAKMKCFSSPEGDHLTLINVYRSAVDFLNKKKLELSK 575

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EK LEK L KWC+ENFIN RSLRHARD
Sbjct: 576 EK-LEKSLRKWCKENFINSRSLRHARD 601


>ref|XP_006484223.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Citrus sinensis]
          Length = 717

 Score =  122 bits (306), Expect = 5e-26
 Identities = 62/87 (71%), Positives = 72/87 (82%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LI VAMLSVESIF+ PREKLEEAR A KSF+SP+GDH+T++NVYR S + LEK K+   K
Sbjct: 524 LITVAMLSVESIFFAPREKLEEARNAMKSFASPDGDHLTLINVYRASDEFLEKRKMEISK 583

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EKT EK L KWC++NFIN RSLRHARD
Sbjct: 584 EKT-EKILRKWCKDNFINSRSLRHARD 609


>gb|EXB44854.1| Putative ATP-dependent RNA helicase DHX33 [Morus notabilis]
          Length = 428

 Score =  121 bits (304), Expect = 9e-26
 Identities = 61/87 (70%), Positives = 71/87 (81%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LI VAMLSVESIFY PREKL+EAR A K FSSPEGDH+T++NVYR S + LEK  ++  K
Sbjct: 235 LITVAMLSVESIFYAPREKLDEARTAMKCFSSPEGDHLTLINVYRASNEFLEKRNLSLGK 294

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EK ++K L KWC+ENFIN RSLRHARD
Sbjct: 295 EK-VDKGLRKWCKENFINSRSLRHARD 320


>ref|XP_006437910.1| hypothetical protein CICLE_v10030826mg [Citrus clementina]
           gi|557540106|gb|ESR51150.1| hypothetical protein
           CICLE_v10030826mg [Citrus clementina]
          Length = 717

 Score =  120 bits (302), Expect = 1e-25
 Identities = 61/87 (70%), Positives = 72/87 (82%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LI VAMLSVESIF+ PREKLEEAR A KSF+SP+GDH+T++NVYR S + LEK K+   K
Sbjct: 524 LITVAMLSVESIFFAPREKLEEARNAMKSFASPDGDHLTLINVYRASDEFLEKRKMEISK 583

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EKT EK L KWC++NFIN RSLRHA+D
Sbjct: 584 EKT-EKILRKWCKDNFINSRSLRHAQD 609


>ref|XP_004246637.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Solanum
           lycopersicum]
          Length = 711

 Score =  119 bits (299), Expect = 3e-25
 Identities = 58/87 (66%), Positives = 72/87 (82%)
 Frame = -3

Query: 262 LIVVAMLSVESIFYFPREKLEEARAARKSFSSPEGDHITMLNVYRTSADSLEKNKIANVK 83
           LI VAMLSVESIFY PREKLEE+R A KSF+SPEGDH+T+LNVYR + +  +KNK+ + +
Sbjct: 518 LICVAMLSVESIFYAPREKLEESRNALKSFASPEGDHLTLLNVYRAADEFFQKNKMVHSE 577

Query: 82  EKTLEKKLNKWCRENFINYRSLRHARD 2
           EK  EK L KWC++N+IN RSL+HARD
Sbjct: 578 EKA-EKNLRKWCKDNYINSRSLKHARD 603


Top