BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00023020
         (1732 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S...   889   0.0  
dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa...   885   0.0  
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g...   885   0.0  
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo...   885   0.0  
ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   884   0.0  
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              882   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   882   0.0  
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   882   0.0  
ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   882   0.0  
ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   878   0.0  
tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays]         873   0.0  
gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Tritic...   870   0.0  
emb|CAE52834.1| RNA polymerase [Hordeum vulgare]                      868   0.0  
ref|NP_001104931.1| RNA polymerase T phage-like 1 [Zea mays] gi|...   868   0.0  
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   859   0.0  
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]      859   0.0  
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]         858   0.0  
emb|CBL87031.1| RNA polymerase [Nuphar advena]                        853   0.0  
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe...   851   0.0  
ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [A...   850   0.0  

>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
            gi|241924412|gb|EER97556.1| hypothetical protein
            SORBIDRAFT_02g039520 [Sorghum bicolor]
          Length = 976

 Score =  889 bits (2296), Expect = 0.0
 Identities = 435/576 (75%), Positives = 495/576 (85%)
 Frame = -2

Query: 1731 DLDKEKTTEEAEGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAK 1552
            +++KE   EEA GD  ++K+ + L KKV  L+K+Q+  Q+  I+K QD+ +PWGQ  QAK
Sbjct: 273  EMEKE---EEAAGDTDIAKEQQRLRKKVTDLMKKQKLRQVRNIVKNQDNSRPWGQDVQAK 329

Query: 1551 VGSRLIELLMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLV 1372
            VGSRLIEL M+TA++QPPASQS+DGL DIRPAFRH  + + KE+ K  R YGVI CDPLV
Sbjct: 330  VGSRLIELFMDTAHIQPPASQSSDGLPDIRPAFRHEMRTVAKEQQKSSRRYGVIKCDPLV 389

Query: 1371 RQGLDKTPRHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQ 1192
            RQGLD+T +H            + WTGY KG HLFL SY+MRTHGARQQREA+KRAPR+Q
Sbjct: 390  RQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQ 449

Query: 1191 MQTIFEALDTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELR 1012
            MQ++FEAL+TLGSTKWRVNK VLSIV+RIWSSGG +A LVDR  +PLPEKPDTEDET ++
Sbjct: 450  MQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVPLPEKPDTEDETLIK 509

Query: 1011 AWKLKMRFVKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNH 832
             WK  +R VKKEN+ERHS+RCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHP+LNH
Sbjct: 510  NWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNH 569

Query: 831  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDS 652
            LGSDLCRGILEFAEGRPLGKSGL WLKIHLANLYAGGVDKLSYDGR+AFTE+HLE+IFDS
Sbjct: 570  LGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRVAFTENHLEEIFDS 629

Query: 651  ADRPLEGERWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAAL 472
            ADRPLEG+RWWLGAE P QCLAVC+NL EALRSSSPETTISHI VHQDGSCNGLQHYAAL
Sbjct: 630  ADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAAL 689

Query: 471  GRDKLGAIAVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRK 292
            GRDKLGAIAVNLV G+KPADVY+GIA RV EIM+ DAQ+DP+ +PD  RA+L+  QVDRK
Sbjct: 690  GRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQKDPSIDPDVARARLIVDQVDRK 749

Query: 291  LVKQTVMTSVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAA 112
            LVKQTVMTSVYGVTYVGAR+QIK+RLKERGVI D+ EL+  SCYAAK TLTALGE+F+AA
Sbjct: 750  LVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELFGASCYAAKVTLTALGEMFQAA 809

Query: 111  HRIMSWLGDCAKIIASENHTVRWTTPLGLPVVQPYR 4
              IM+WLGDCAK+IA EN  VRWTTPLGLPVVQPYR
Sbjct: 810  RGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYR 845


>dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group]
            gi|48716846|dbj|BAD23544.1| putative phage-type RNA
            polymerase [Oryza sativa Japonica Group]
            gi|215694941|dbj|BAG90132.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 951

 Score =  885 bits (2286), Expect = 0.0
 Identities = 431/574 (75%), Positives = 489/574 (85%)
 Frame = -2

Query: 1725 DKEKTTEEAEGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVG 1546
            +KE   EE  GD  ++K+ E L KKV  L+K+Q+  Q+  I+K QD+ KPWGQ A AKVG
Sbjct: 313  NKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVG 372

Query: 1545 SRLIELLMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQ 1366
            SRLIEL++ETAY+QPPASQSADG  DIRPAF H  + + +E+ K  R YGVI CDPLVRQ
Sbjct: 373  SRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQ 432

Query: 1365 GLDKTPRHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQ 1186
            GLD+T +H            ++WTGY KG HLFL SY+MRTHGARQQR+A++RAPR+QMQ
Sbjct: 433  GLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQ 492

Query: 1185 TIFEALDTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAW 1006
            ++FEAL+TLGSTKWRVNK VLSIV+RIWSSGG +A LVDR  + LPEKPDTEDE +L+ W
Sbjct: 493  SVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKW 552

Query: 1005 KLKMRFVKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLG 826
            +  +R  KKEN+ERHS+RCDVELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLG
Sbjct: 553  RWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLG 612

Query: 825  SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSAD 646
            SDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGR+AFTE+HLEDIFDSAD
Sbjct: 613  SDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSAD 672

Query: 645  RPLEGERWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGR 466
            RPLEG+RWWLGAE P QCLAVCINL EALRS SPET ISHI VHQDGSCNGLQHYAALGR
Sbjct: 673  RPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGR 732

Query: 465  DKLGAIAVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLV 286
            DKLGAIAVNLV G+KPADVY+GIA RV EIM+ DA +DPA +PDA RA+LL  QVDRKLV
Sbjct: 733  DKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLV 792

Query: 285  KQTVMTSVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHR 106
            KQTVMTSVYGVTYVGAREQIK+RLKER +I DD+EL+  SCYAAK TLTALGE+F+AA  
Sbjct: 793  KQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARS 852

Query: 105  IMSWLGDCAKIIASENHTVRWTTPLGLPVVQPYR 4
            IM+WLGDCAK+IA EN  VRWTTPLGLPVVQPYR
Sbjct: 853  IMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYR 886


>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
            gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
            Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
            single subunit RNA polymerase [Oryza sativa Japonica
            Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
            sativa Japonica Group]
          Length = 1017

 Score =  885 bits (2286), Expect = 0.0
 Identities = 431/574 (75%), Positives = 489/574 (85%)
 Frame = -2

Query: 1725 DKEKTTEEAEGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVG 1546
            +KE   EE  GD  ++K+ E L KKV  L+K+Q+  Q+  I+K QD+ KPWGQ A AKVG
Sbjct: 313  NKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVG 372

Query: 1545 SRLIELLMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQ 1366
            SRLIEL++ETAY+QPPASQSADG  DIRPAF H  + + +E+ K  R YGVI CDPLVRQ
Sbjct: 373  SRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQ 432

Query: 1365 GLDKTPRHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQ 1186
            GLD+T +H            ++WTGY KG HLFL SY+MRTHGARQQR+A++RAPR+QMQ
Sbjct: 433  GLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQ 492

Query: 1185 TIFEALDTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAW 1006
            ++FEAL+TLGSTKWRVNK VLSIV+RIWSSGG +A LVDR  + LPEKPDTEDE +L+ W
Sbjct: 493  SVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKW 552

Query: 1005 KLKMRFVKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLG 826
            +  +R  KKEN+ERHS+RCDVELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLG
Sbjct: 553  RWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLG 612

Query: 825  SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSAD 646
            SDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGR+AFTE+HLEDIFDSAD
Sbjct: 613  SDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSAD 672

Query: 645  RPLEGERWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGR 466
            RPLEG+RWWLGAE P QCLAVCINL EALRS SPET ISHI VHQDGSCNGLQHYAALGR
Sbjct: 673  RPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGR 732

Query: 465  DKLGAIAVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLV 286
            DKLGAIAVNLV G+KPADVY+GIA RV EIM+ DA +DPA +PDA RA+LL  QVDRKLV
Sbjct: 733  DKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLV 792

Query: 285  KQTVMTSVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHR 106
            KQTVMTSVYGVTYVGAREQIK+RLKER +I DD+EL+  SCYAAK TLTALGE+F+AA  
Sbjct: 793  KQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARS 852

Query: 105  IMSWLGDCAKIIASENHTVRWTTPLGLPVVQPYR 4
            IM+WLGDCAK+IA EN  VRWTTPLGLPVVQPYR
Sbjct: 853  IMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYR 886


>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
          Length = 983

 Score =  885 bits (2286), Expect = 0.0
 Identities = 431/574 (75%), Positives = 489/574 (85%)
 Frame = -2

Query: 1725 DKEKTTEEAEGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVG 1546
            +KE   EE  GD  ++K+ E L KKV  L+K+Q+  Q+  I+K QD+ KPWGQ A AKVG
Sbjct: 279  NKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVG 338

Query: 1545 SRLIELLMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQ 1366
            SRLIEL++ETAY+QPPASQSADG  DIRPAF H  + + +E+ K  R YGVI CDPLVRQ
Sbjct: 339  SRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQ 398

Query: 1365 GLDKTPRHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQ 1186
            GLD+T +H            ++WTGY KG HLFL SY+MRTHGARQQR+A++RAPR+QMQ
Sbjct: 399  GLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQ 458

Query: 1185 TIFEALDTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAW 1006
            ++FEAL+TLGSTKWRVNK VLSIV+RIWSSGG +A LVDR  + LPEKPDTEDE +L+ W
Sbjct: 459  SVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKW 518

Query: 1005 KLKMRFVKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLG 826
            +  +R  KKEN+ERHS+RCDVELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLG
Sbjct: 519  RWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLG 578

Query: 825  SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSAD 646
            SDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGR+AFTE+HLEDIFDSAD
Sbjct: 579  SDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSAD 638

Query: 645  RPLEGERWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGR 466
            RPLEG+RWWLGAE P QCLAVCINL EALRS SPET ISHI VHQDGSCNGLQHYAALGR
Sbjct: 639  RPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGR 698

Query: 465  DKLGAIAVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLV 286
            DKLGAIAVNLV G+KPADVY+GIA RV EIM+ DA +DPA +PDA RA+LL  QVDRKLV
Sbjct: 699  DKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLV 758

Query: 285  KQTVMTSVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHR 106
            KQTVMTSVYGVTYVGAREQIK+RLKER +I DD+EL+  SCYAAK TLTALGE+F+AA  
Sbjct: 759  KQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARS 818

Query: 105  IMSWLGDCAKIIASENHTVRWTTPLGLPVVQPYR 4
            IM+WLGDCAK+IA EN  VRWTTPLGLPVVQPYR
Sbjct: 819  IMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYR 852


>ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Setaria italica]
          Length = 1005

 Score =  884 bits (2285), Expect = 0.0
 Identities = 432/574 (75%), Positives = 491/574 (85%)
 Frame = -2

Query: 1725 DKEKTTEEAEGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVG 1546
            +KEK  EE   D  ++K+ + L KKV  L+K+Q+  Q+ +I+K QDD +PWGQ A AKVG
Sbjct: 301  NKEKENEEEIFDSDIAKEQQRLRKKVTDLMKKQKLRQVRKIVKNQDDSRPWGQDAHAKVG 360

Query: 1545 SRLIELLMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQ 1366
            SRLIEL +ETA++QPPASQS+DGL DIRPAFRH  + + KE+ K  R YGVI CDPLVRQ
Sbjct: 361  SRLIELFIETAHIQPPASQSSDGLPDIRPAFRHEMRTVPKEQQKHSRRYGVIKCDPLVRQ 420

Query: 1365 GLDKTPRHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQ 1186
            GLD+T +H            + WTGY KG HLFL SY+MRTHGARQQREA+KRAPR+QMQ
Sbjct: 421  GLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQ 480

Query: 1185 TIFEALDTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAW 1006
            ++FEAL+TLGSTKWRVNK VLSI++RIWSSGG +A LVDR  +PLPEKPDTEDET L+ W
Sbjct: 481  SVFEALNTLGSTKWRVNKRVLSIIDRIWSSGGRLADLVDRTDVPLPEKPDTEDETVLKKW 540

Query: 1005 KLKMRFVKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLG 826
            +   R VKK N+ERHS+RCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHP+LNHLG
Sbjct: 541  RWHTRSVKKGNSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLG 600

Query: 825  SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSAD 646
            SDLCRG+LEFAEGRPLG+SGLRWLKIHLANLYAGGVDKLSY GR+AF E+HLE+IFDSAD
Sbjct: 601  SDLCRGVLEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYAGRIAFAENHLEEIFDSAD 660

Query: 645  RPLEGERWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGR 466
            RPLEG+RWWLGAE P QCLAVC+NL EALRS SPE TISHI VHQDGSCNGLQHYAALGR
Sbjct: 661  RPLEGKRWWLGAEDPFQCLAVCMNLTEALRSPSPEATISHIPVHQDGSCNGLQHYAALGR 720

Query: 465  DKLGAIAVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLV 286
            DKLGAIAVNLV G+KPADVYSGIA RV EIM+RD+Q+DP+ +PDA RA+L+  QVDRKLV
Sbjct: 721  DKLGAIAVNLVAGEKPADVYSGIATRVVEIMRRDSQKDPSTDPDAARARLILDQVDRKLV 780

Query: 285  KQTVMTSVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHR 106
            KQTVMTSVYGVTYVGAREQIK+RLKERGVIADD EL+  SCYAAK TLTALGE+F+AA  
Sbjct: 781  KQTVMTSVYGVTYVGAREQIKRRLKERGVIADDAELFGASCYAAKVTLTALGEMFQAARS 840

Query: 105  IMSWLGDCAKIIASENHTVRWTTPLGLPVVQPYR 4
            IM+WLGDCAK+IA EN  V+WTTPLGLPVVQPYR
Sbjct: 841  IMNWLGDCAKVIACENEPVKWTTPLGLPVVQPYR 874


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  882 bits (2280), Expect = 0.0
 Identities = 428/564 (75%), Positives = 487/564 (86%)
 Frame = -2

Query: 1695 GDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVGSRLIELLMET 1516
            G + V+K+ E L KKV++L+K+Q+  Q+ +I+K QDD KPWGQ A  KVGSRLIELL+ET
Sbjct: 116  GSNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIET 175

Query: 1515 AYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQGLDKTPRHXX 1336
            AY+QPPA Q  DG  DIRPAF HT K +IKE  K  R YGVI CDPLVR+GL+KT RH  
Sbjct: 176  AYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMV 235

Query: 1335 XXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQTIFEALDTLG 1156
                      +NWTGY KG +LFL SY+MR HGARQQREAIKRAPRK ++  FEAL+TLG
Sbjct: 236  IPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLG 295

Query: 1155 STKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAWKLKMRFVKKE 976
            +TKWR+NK VL +++RIW+SGG +A LVDRE +PLPE+PDTEDE E+R WK K+R VKKE
Sbjct: 296  NTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKE 355

Query: 975  NNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEF 796
            N+ERHS+RCD+ELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF
Sbjct: 356  NSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF 415

Query: 795  AEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSADRPLEGERWWL 616
            AEGRPLGKSGLRWLKIHLAN+YAGGVDKLSY+GR+AFTE+HLEDIFDSADRPLEG RWWL
Sbjct: 416  AEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWL 475

Query: 615  GAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGRDKLGAIAVNL 436
             AE P QCLA CINL+EALRSSSPETTISH+ VHQDGSCNGLQHYAALGRDKLGA AVNL
Sbjct: 476  SAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNL 535

Query: 435  VDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLVKQTVMTSVYG 256
            V G+KPADVYSGIAARV +IMQRDAQ+DPA  P+ALRA+LL +QVDRKLVKQTVMTSVYG
Sbjct: 536  VAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYG 595

Query: 255  VTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHRIMSWLGDCAK 76
            VTY+GAR+QIK+RLKER  IAD+ E++  SCYAAKTTLTALGE+FEAA  IMSWLGDCAK
Sbjct: 596  VTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAK 655

Query: 75   IIASENHTVRWTTPLGLPVVQPYR 4
            +IASENH VRW TPLGLPVVQPYR
Sbjct: 656  VIASENHPVRWNTPLGLPVVQPYR 679


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  882 bits (2280), Expect = 0.0
 Identities = 428/564 (75%), Positives = 487/564 (86%)
 Frame = -2

Query: 1695 GDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVGSRLIELLMET 1516
            G + V+K+ E L KKV++L+K+Q+  Q+ +I+K QDD KPWGQ A  KVGSRLIELL+ET
Sbjct: 284  GSNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIET 343

Query: 1515 AYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQGLDKTPRHXX 1336
            AY+QPPA Q  DG  DIRPAF HT K +IKE  K  R YGVI CDPLVR+GL+KT RH  
Sbjct: 344  AYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMV 403

Query: 1335 XXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQTIFEALDTLG 1156
                      +NWTGY KG +LFL SY+MR HGARQQREAIKRAPRK ++  FEAL+TLG
Sbjct: 404  IPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLG 463

Query: 1155 STKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAWKLKMRFVKKE 976
            +TKWR+NK VL +++RIW+SGG +A LVDRE +PLPE+PDTEDE E+R WK K+R VKKE
Sbjct: 464  NTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKE 523

Query: 975  NNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEF 796
            N+ERHS+RCD+ELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF
Sbjct: 524  NSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF 583

Query: 795  AEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSADRPLEGERWWL 616
            AEGRPLGKSGLRWLKIHLAN+YAGGVDKLSY+GR+AFTE+HLEDIFDSADRPLEG RWWL
Sbjct: 584  AEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWL 643

Query: 615  GAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGRDKLGAIAVNL 436
             AE P QCLA CINL+EALRSSSPETTISH+ VHQDGSCNGLQHYAALGRDKLGA AVNL
Sbjct: 644  SAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNL 703

Query: 435  VDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLVKQTVMTSVYG 256
            V G+KPADVYSGIAARV +IMQRDAQ+DPA  P+ALRA+LL +QVDRKLVKQTVMTSVYG
Sbjct: 704  VAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYG 763

Query: 255  VTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHRIMSWLGDCAK 76
            VTY+GAR+QIK+RLKER  IAD+ E++  SCYAAKTTLTALGE+FEAA  IMSWLGDCAK
Sbjct: 764  VTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAK 823

Query: 75   IIASENHTVRWTTPLGLPVVQPYR 4
            +IASENH VRW TPLGLPVVQPYR
Sbjct: 824  VIASENHPVRWNTPLGLPVVQPYR 847


>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
            X2 [Oryza brachyantha]
          Length = 839

 Score =  882 bits (2279), Expect = 0.0
 Identities = 431/573 (75%), Positives = 485/573 (84%)
 Frame = -2

Query: 1722 KEKTTEEAEGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVGS 1543
            KE   EE  G   ++K+ E L KKV  L+K+ +  Q+  I+K QD+ KPWGQ   AKVGS
Sbjct: 136  KEMDNEEEVGCSDIAKEQERLRKKVTDLMKKHKLRQVRYIVKKQDNSKPWGQDVHAKVGS 195

Query: 1542 RLIELLMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQG 1363
            RLIEL++ETAY+QPPASQSADG  DIRPAF H  + + KE+ K  R YGVI CDPLVRQG
Sbjct: 196  RLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAKEQQKSSRRYGVIKCDPLVRQG 255

Query: 1362 LDKTPRHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQT 1183
            LD+T +H            ++WTGY KG HLFL SY+MRTHGARQQREA+KRAPR+QMQ+
Sbjct: 256  LDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQS 315

Query: 1182 IFEALDTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAWK 1003
            +FEALDTLGSTKWRVNK VLSIV+RIWSSGG +A LVDR  + LPEKPDTEDE +L+ W+
Sbjct: 316  VFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRSDVALPEKPDTEDEAKLKKWR 375

Query: 1002 LKMRFVKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGS 823
              ++  KKEN+ERHS+RCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHP+LNHLGS
Sbjct: 376  WNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGS 435

Query: 822  DLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSADR 643
            DLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGR+AFTE+HLEDIFDSADR
Sbjct: 436  DLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADR 495

Query: 642  PLEGERWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGRD 463
            PLEG+RWWLGAE P QCLAVCINL EALRS SPET ISHI VHQDGSCNGLQHYAALGRD
Sbjct: 496  PLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRD 555

Query: 462  KLGAIAVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLVK 283
            KLGAIAVNLV G+KPADVY+GIA RV EIM+ DA +DPA +PDA RA++L  QVDRKLVK
Sbjct: 556  KLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDPATDPDAARARMLVDQVDRKLVK 615

Query: 282  QTVMTSVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHRI 103
            QTVMTSVYGVTYVGAREQIK+RLKER +I DD+EL+  SCYAAK TLTALGE+F+AA  I
Sbjct: 616  QTVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSASCYAAKVTLTALGEMFQAARSI 675

Query: 102  MSWLGDCAKIIASENHTVRWTTPLGLPVVQPYR 4
            M+WLGDCAKIIA EN  V+WTTPLGLPVVQPYR
Sbjct: 676  MNWLGDCAKIIACENEPVKWTTPLGLPVVQPYR 708


>ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
            X1 [Oryza brachyantha]
          Length = 703

 Score =  882 bits (2279), Expect = 0.0
 Identities = 431/573 (75%), Positives = 485/573 (84%)
 Frame = -2

Query: 1722 KEKTTEEAEGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVGS 1543
            KE   EE  G   ++K+ E L KKV  L+K+ +  Q+  I+K QD+ KPWGQ   AKVGS
Sbjct: 109  KEMDNEEEVGCSDIAKEQERLRKKVTDLMKKHKLRQVRYIVKKQDNSKPWGQDVHAKVGS 168

Query: 1542 RLIELLMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQG 1363
            RLIEL++ETAY+QPPASQSADG  DIRPAF H  + + KE+ K  R YGVI CDPLVRQG
Sbjct: 169  RLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAKEQQKSSRRYGVIKCDPLVRQG 228

Query: 1362 LDKTPRHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQT 1183
            LD+T +H            ++WTGY KG HLFL SY+MRTHGARQQREA+KRAPR+QMQ+
Sbjct: 229  LDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQS 288

Query: 1182 IFEALDTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAWK 1003
            +FEALDTLGSTKWRVNK VLSIV+RIWSSGG +A LVDR  + LPEKPDTEDE +L+ W+
Sbjct: 289  VFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRSDVALPEKPDTEDEAKLKKWR 348

Query: 1002 LKMRFVKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGS 823
              ++  KKEN+ERHS+RCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHP+LNHLGS
Sbjct: 349  WNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGS 408

Query: 822  DLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSADR 643
            DLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGR+AFTE+HLEDIFDSADR
Sbjct: 409  DLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADR 468

Query: 642  PLEGERWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGRD 463
            PLEG+RWWLGAE P QCLAVCINL EALRS SPET ISHI VHQDGSCNGLQHYAALGRD
Sbjct: 469  PLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRD 528

Query: 462  KLGAIAVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLVK 283
            KLGAIAVNLV G+KPADVY+GIA RV EIM+ DA +DPA +PDA RA++L  QVDRKLVK
Sbjct: 529  KLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDPATDPDAARARMLVDQVDRKLVK 588

Query: 282  QTVMTSVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHRI 103
            QTVMTSVYGVTYVGAREQIK+RLKER +I DD+EL+  SCYAAK TLTALGE+F+AA  I
Sbjct: 589  QTVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSASCYAAKVTLTALGEMFQAARSI 648

Query: 102  MSWLGDCAKIIASENHTVRWTTPLGLPVVQPYR 4
            M+WLGDCAKIIA EN  V+WTTPLGLPVVQPYR
Sbjct: 649  MNWLGDCAKIIACENEPVKWTTPLGLPVVQPYR 681


>ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Brachypodium
            distachyon]
          Length = 992

 Score =  878 bits (2269), Expect = 0.0
 Identities = 429/578 (74%), Positives = 488/578 (84%), Gaps = 5/578 (0%)
 Frame = -2

Query: 1722 KEKTTEEAE-----GDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQ 1558
            K+K T+E +     GD  ++K+ + L KKV  L+K+Q+  Q+  I+K QD  +PWGQ A 
Sbjct: 284  KKKNTKEVDNVVEAGDSDIAKEQQRLRKKVTDLMKKQKIRQVRNIVKKQDSTRPWGQDAH 343

Query: 1557 AKVGSRLIELLMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDP 1378
            AKVGSRLIELL+ETA++QPP SQSAD   DIRPAF H  + + +E+ K  R YGVI CDP
Sbjct: 344  AKVGSRLIELLIETAHIQPPVSQSADSTPDIRPAFTHEMRTVTREQQKSSRRYGVIKCDP 403

Query: 1377 LVRQGLDKTPRHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPR 1198
            L+RQGLD+T +H            ++WTGY KG HLFL SY+MRTHGARQQREA+K+AP+
Sbjct: 404  LIRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQREAVKKAPK 463

Query: 1197 KQMQTIFEALDTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETE 1018
            +QMQ IFEALDTLGSTKWR+NK VLSIV+RIWSSGG +A LVDR  + LPEKPDTEDETE
Sbjct: 464  EQMQLIFEALDTLGSTKWRINKKVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDETE 523

Query: 1017 LRAWKLKMRFVKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHL 838
            L+ W+  +R VKKEN+ERHS+RCDVELKLAVARKMKDE GFYYPHNLDFRGRAYPMHP+L
Sbjct: 524  LKKWRWNLRSVKKENSERHSQRCDVELKLAVARKMKDEVGFYYPHNLDFRGRAYPMHPYL 583

Query: 837  NHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIF 658
            NHLGSDLCRG+LEF+EGRPLG SGL WLKIHLANLYAGGVDKLSYDGR+AFTE+HLEDIF
Sbjct: 584  NHLGSDLCRGVLEFSEGRPLGDSGLCWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIF 643

Query: 657  DSADRPLEGERWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYA 478
            DSA+RPLEG+RWWLGAE P QCLAVC++L EALRSSSPE  ISHI VHQDGSCNGLQHYA
Sbjct: 644  DSANRPLEGKRWWLGAEDPFQCLAVCMDLTEALRSSSPEAMISHIPVHQDGSCNGLQHYA 703

Query: 477  ALGRDKLGAIAVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVD 298
            ALGRDKLGAIAVNLV G+KPADVYSGIA RV EIM+RDAQ+DPA +PDA RA+LL  QVD
Sbjct: 704  ALGRDKLGAIAVNLVSGEKPADVYSGIATRVVEIMRRDAQKDPALDPDAARARLLVDQVD 763

Query: 297  RKLVKQTVMTSVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFE 118
            RKLVKQTVMTSVYGVTYVGAREQIK+RLKERGVI DD+EL+  SCYAAK TLTALGE+FE
Sbjct: 764  RKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIGDDSELFAASCYAAKVTLTALGEMFE 823

Query: 117  AAHRIMSWLGDCAKIIASENHTVRWTTPLGLPVVQPYR 4
            AA  IM+WLGDCAK+IA EN  VRW TPLGLPVVQPYR
Sbjct: 824  AARSIMNWLGDCAKVIACENEPVRWMTPLGLPVVQPYR 861


>tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays]
          Length = 975

 Score =  873 bits (2256), Expect = 0.0
 Identities = 424/574 (73%), Positives = 487/574 (84%)
 Frame = -2

Query: 1725 DKEKTTEEAEGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVG 1546
            +KE   EE  GD  ++ + + L KKV  L+K+Q+  Q+  I+K QD  +PWGQ A AKVG
Sbjct: 271  NKEMENEEEAGDTNIAIEQQRLRKKVTDLMKKQKLRQVRNIVKNQDKSRPWGQDAHAKVG 330

Query: 1545 SRLIELLMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQ 1366
            SRLI+L + TA++QPPASQS+DGL DIRPAFRH  + ++KE+ K  R YGVI CDPLVRQ
Sbjct: 331  SRLIDLFIGTAHIQPPASQSSDGLPDIRPAFRHEMRTMVKEQQKSSRRYGVIKCDPLVRQ 390

Query: 1365 GLDKTPRHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQ 1186
            GLD+T +H            + WTGY KG HLFL SY+MRTHGARQQR+A+KRAPR+QMQ
Sbjct: 391  GLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGARQQRDAVKRAPREQMQ 450

Query: 1185 TIFEALDTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAW 1006
             +FEAL+TLGSTKWRVNK VLSIV+RIWS+GG +A LVDR  +P+PEKPDTEDET L+ W
Sbjct: 451  FVFEALNTLGSTKWRVNKRVLSIVDRIWSNGGRLADLVDRTDVPVPEKPDTEDETLLKNW 510

Query: 1005 KLKMRFVKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLG 826
            K  +R  KK+N+ERHS+RCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHP+LNHLG
Sbjct: 511  KWHLRAAKKKNSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLG 570

Query: 825  SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSAD 646
            SDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYA GVDKLSYDGR+AF E+HLE+IFDSAD
Sbjct: 571  SDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAAGVDKLSYDGRIAFAENHLEEIFDSAD 630

Query: 645  RPLEGERWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGR 466
            RPLEG RWWLGAE P QCLAVC+NL EALRSSSPETTISHI VHQDGSCNGLQHYAALG+
Sbjct: 631  RPLEGRRWWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGK 690

Query: 465  DKLGAIAVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLV 286
            DKLGAIAVNLV G+KPADVY+GIA RV EIM+ DAQ+DP+  PDA RA+L+  QVDRKLV
Sbjct: 691  DKLGAIAVNLVAGEKPADVYTGIANRVMEIMRMDAQKDPSVEPDAARARLIVDQVDRKLV 750

Query: 285  KQTVMTSVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHR 106
            KQTVMTSVYGVTY+GAREQI++RLKERGVI +D+EL+  SCYAAK TLTALGE+F+AA  
Sbjct: 751  KQTVMTSVYGVTYIGAREQIRRRLKERGVIPNDSELFGASCYAAKVTLTALGEMFQAARS 810

Query: 105  IMSWLGDCAKIIASENHTVRWTTPLGLPVVQPYR 4
            IM+WLGDCAK+IA EN  VRWTTPLGLPVVQPYR
Sbjct: 811  IMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYR 844


>gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Triticum aestivum]
          Length = 1005

 Score =  870 bits (2247), Expect = 0.0
 Identities = 427/578 (73%), Positives = 488/578 (84%), Gaps = 5/578 (0%)
 Frame = -2

Query: 1722 KEKTTEEAEG-----DDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQ 1558
            K+K T+E +      D  ++K+ E L KKV  L+K+Q+  Q+  ++K QD  +PWGQ A 
Sbjct: 298  KKKNTKEVDKVVEAVDADIAKEQERLRKKVTDLMKKQKIRQVRHLVKKQDSTRPWGQDAH 357

Query: 1557 AKVGSRLIELLMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDP 1378
            AKVGSRLIEL +ETA++QPPASQS D   +IRPAF H  + + +E+ K RR YGVI CDP
Sbjct: 358  AKVGSRLIELFIETAHIQPPASQSGDSTPEIRPAFTHEMRTVAREQRKSRR-YGVIKCDP 416

Query: 1377 LVRQGLDKTPRHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPR 1198
            LVRQGLD+T +H            +NWTGY KG HLFL SY+MRTHGARQQREA+K+AP+
Sbjct: 417  LVRQGLDRTAKHMVIPYMPMLIPPINWTGYDKGAHLFLPSYVMRTHGARQQREAVKKAPK 476

Query: 1197 KQMQTIFEALDTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETE 1018
            +QMQTIFEALD LGSTKWRVNK VLSIV+RIWSSGG +A LVDR  + LPEKPDTEDE E
Sbjct: 477  EQMQTIFEALDNLGSTKWRVNKEVLSIVDRIWSSGGRLADLVDRADVSLPEKPDTEDEAE 536

Query: 1017 LRAWKLKMRFVKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHL 838
            L+ W+  MR  +KEN+ERHS+RCDVELKLAVARKMK+E GFYYPHNLDFRGRAYPMHP+L
Sbjct: 537  LKKWRWSMRSAEKENSERHSQRCDVELKLAVARKMKEEAGFYYPHNLDFRGRAYPMHPYL 596

Query: 837  NHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIF 658
            NHLGSDLCRG+LEF+EGRPLG+SGLRWLKIHLANLY GGVDKLSYDGR+AFTE+HL+DIF
Sbjct: 597  NHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSYDGRIAFTENHLDDIF 656

Query: 657  DSADRPLEGERWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYA 478
            DSA+RPLEG+RWWL AE P QCLAVC++L EALRS SPET ISHI VHQDGSCNGLQHYA
Sbjct: 657  DSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSPSPETVISHIPVHQDGSCNGLQHYA 716

Query: 477  ALGRDKLGAIAVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVD 298
            ALGRDKLGA+AVNLV G+KPADVYSGIAARV EIM+RDAQ+DPAK+ DA RA+LL  QVD
Sbjct: 717  ALGRDKLGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQKDPAKDADAARARLLVDQVD 776

Query: 297  RKLVKQTVMTSVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFE 118
            RKLVKQTVMTSVYGVTYVGAREQIK+RLKERGVIADD+EL+  SCYAAK TLTALGE+FE
Sbjct: 777  RKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDSELFGASCYAAKVTLTALGEMFE 836

Query: 117  AAHRIMSWLGDCAKIIASENHTVRWTTPLGLPVVQPYR 4
            AA  IM+WLGDCAK+IA EN  VRWTTPLGLPVVQPYR
Sbjct: 837  AARSIMTWLGDCAKVIACENEPVRWTTPLGLPVVQPYR 874


>emb|CAE52834.1| RNA polymerase [Hordeum vulgare]
          Length = 862

 Score =  868 bits (2243), Expect = 0.0
 Identities = 425/578 (73%), Positives = 487/578 (84%), Gaps = 5/578 (0%)
 Frame = -2

Query: 1722 KEKTTEEAE-----GDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQ 1558
            K+K T+E +     GD  ++K+ + L KKV  L+K+Q+  Q+  ++K QD  +PWGQ A 
Sbjct: 156  KKKNTKEVDKVVEPGDSDIAKEQQLLRKKVTDLMKKQKIRQVRHLVKKQDSTRPWGQDAH 215

Query: 1557 AKVGSRLIELLMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDP 1378
            AKVGSRLIEL +ETA++QPPASQS D   +IRPAF H  + + +E+   R  YGVI CDP
Sbjct: 216  AKVGSRLIELFIETAHIQPPASQSGDSTPEIRPAFTHEMRTVAREQKSRR--YGVIKCDP 273

Query: 1377 LVRQGLDKTPRHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPR 1198
            LVRQGLD+T +H            +NWTGY KG HLFL SY+MRTHGARQQREA+K+AP+
Sbjct: 274  LVRQGLDRTAKHMVIPYMPMLIPPINWTGYDKGAHLFLPSYVMRTHGARQQREAVKKAPK 333

Query: 1197 KQMQTIFEALDTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETE 1018
            +QMQTIFEALD LGSTKWRVNK VLSIV+RIWSSGG +A LVDR  + LPEKPDTEDE E
Sbjct: 334  EQMQTIFEALDNLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRADVSLPEKPDTEDEAE 393

Query: 1017 LRAWKLKMRFVKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHL 838
            L+ W+  MR  KKEN+ERHS+RCDVELKLAVARKMK+E GFY+PHNLDFRGRAYPMHP+L
Sbjct: 394  LKKWRWSMRSAKKENSERHSQRCDVELKLAVARKMKEEVGFYHPHNLDFRGRAYPMHPYL 453

Query: 837  NHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIF 658
            NHLGSDLCRG+LEF+EGRPLG+SGLRWLKIHLANLY GGVDKLSYDGR+AFTE+HLEDIF
Sbjct: 454  NHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSYDGRIAFTENHLEDIF 513

Query: 657  DSADRPLEGERWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYA 478
            DSA+RPLEG+RWWL AE P QCLAVC++L EALRSSSPET ISHI VHQDGSCNGLQHYA
Sbjct: 514  DSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSSSPETVISHIPVHQDGSCNGLQHYA 573

Query: 477  ALGRDKLGAIAVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVD 298
            ALGRDKLGA+AVNLV G+KPADVYSGIAARV EIM+RDAQ+DPAK+ DA RA+LL  QVD
Sbjct: 574  ALGRDKLGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQKDPAKDADAARARLLVDQVD 633

Query: 297  RKLVKQTVMTSVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFE 118
            R+LVKQTVMTSVYGVTYVGAREQIK+RLKERGVIADD+EL+  SCYAAK TLTALGE+FE
Sbjct: 634  RRLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDSELFGASCYAAKVTLTALGEMFE 693

Query: 117  AAHRIMSWLGDCAKIIASENHTVRWTTPLGLPVVQPYR 4
            AA  IM+WLGDCAK+IA EN  VRW TPLGLPVVQPYR
Sbjct: 694  AARSIMNWLGDCAKVIACENEPVRWKTPLGLPVVQPYR 731


>ref|NP_001104931.1| RNA polymerase T phage-like 1 [Zea mays]
            gi|4559304|gb|AAD22976.1|AF127021_1 T7-like RNA
            polymerase [Zea mays]
          Length = 975

 Score =  868 bits (2243), Expect = 0.0
 Identities = 423/574 (73%), Positives = 486/574 (84%)
 Frame = -2

Query: 1725 DKEKTTEEAEGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVG 1546
            +KE   EE  GD  ++ + + L KKV  L+K+Q+  Q+  I+K QD  +PWGQ A AKVG
Sbjct: 271  NKEMENEEEAGDTNIAVEQQRLRKKVTDLMKKQKLRQVRNIVKNQDKSRPWGQDAHAKVG 330

Query: 1545 SRLIELLMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQ 1366
            SRLI+L + TA++QPPASQS+DGL DIRPAFRH  + ++KE+ K  R YGVI CDPLVRQ
Sbjct: 331  SRLIDLFIGTAHIQPPASQSSDGLPDIRPAFRHEMRTMVKEQQKSSRRYGVIKCDPLVRQ 390

Query: 1365 GLDKTPRHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQ 1186
            GLD+T +H            + WTGY KG HLFL SY+MRTHGARQQR+A+KRAPR+QMQ
Sbjct: 391  GLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGARQQRDAVKRAPREQMQ 450

Query: 1185 TIFEALDTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAW 1006
             +FEAL+TLGSTKWRVNK VLSIV+RIWS+GG +A LVDR  +P+PEKPDTEDET L+ W
Sbjct: 451  FVFEALNTLGSTKWRVNKRVLSIVDRIWSNGGRLADLVDRTDVPVPEKPDTEDETLLKNW 510

Query: 1005 KLKMRFVKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLG 826
            K  +R  KK+N+ERHS+RCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHP+LNHLG
Sbjct: 511  KWHLRAAKKKNSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLG 570

Query: 825  SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSAD 646
            SDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYA GVDKLSYDGR+AF E+HLE+IFDSAD
Sbjct: 571  SDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAAGVDKLSYDGRIAFAENHLEEIFDSAD 630

Query: 645  RPLEGERWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGR 466
            RPLEG RW LGAE P QCLAVC+NL EALRSSSPETTISHI VHQDGSCNGLQHYAALG+
Sbjct: 631  RPLEGRRWRLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGK 690

Query: 465  DKLGAIAVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLV 286
            DKLGAIAVNLV G+KPADVY+GIA RV EIM+ DAQ+DP+  PDA RA+L+  QVDRKLV
Sbjct: 691  DKLGAIAVNLVAGEKPADVYTGIANRVMEIMRMDAQKDPSVEPDAARARLIVDQVDRKLV 750

Query: 285  KQTVMTSVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHR 106
            KQTVMTSVYGVTY+GAREQI++RLKERGVI +D+EL+  SCYAAK TLTALGE+F+AA  
Sbjct: 751  KQTVMTSVYGVTYIGAREQIRRRLKERGVIPNDSELFGASCYAAKVTLTALGEMFQAARS 810

Query: 105  IMSWLGDCAKIIASENHTVRWTTPLGLPVVQPYR 4
            IM+WLGDCAK+IA EN  VRWTTPLGLPVVQPYR
Sbjct: 811  IMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYR 844


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
          Length = 1002

 Score =  859 bits (2219), Expect = 0.0
 Identities = 421/568 (74%), Positives = 479/568 (84%)
 Frame = -2

Query: 1707 EEAEGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVGSRLIEL 1528
            EE  GD  + K+ E L KKV IL+K+Q+  Q+ +I+K QDD KPWGQ    KVG RLI++
Sbjct: 308  EETPGD--MMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQDNLVKVGCRLIQI 365

Query: 1527 LMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQGLDKTP 1348
            LMETAY+QPP  Q  DG  DIRPAF HT K +  E  K  R YGVI CDPLVR+GLDKT 
Sbjct: 366  LMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV--ETMKGSRRYGVIQCDPLVRKGLDKTA 423

Query: 1347 RHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQTIFEAL 1168
            RH             +W GY KGG+LFL SYIMRTHGA+QQREA+KR P+KQ++ +F+AL
Sbjct: 424  RHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQAL 483

Query: 1167 DTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAWKLKMRF 988
            DTLG+TKWRVN+ VL IV+RIW+SGG +A LVDRE +PLPE PDTEDE E+R WK K++ 
Sbjct: 484  DTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTEDEAEIRKWKWKVKG 543

Query: 987  VKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRG 808
            VKKEN ERHS+RCD+ELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLGSDLCRG
Sbjct: 544  VKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 603

Query: 807  ILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSADRPLEGE 628
            ILEFAEGRPLG SGLRWLKIHLAN+Y GGVDKLSY+GR+AF+E+HLEDIFDSA+RPLEG+
Sbjct: 604  ILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDSAERPLEGK 663

Query: 627  RWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGRDKLGAI 448
            RWWLGAE P QCLA CIN+AEALRS SPET IS++ +HQDGSCNGLQHYAALGRDKLGA 
Sbjct: 664  RWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKLGAA 723

Query: 447  AVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLVKQTVMT 268
            AVNLV GDKPADVYSGIAARV +IM+RDA +DPA +P+ +RA+LL  QVDRKLVKQTVMT
Sbjct: 724  AVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVMT 783

Query: 267  SVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHRIMSWLG 88
            SVYGVTY+GAR+QIKKRLKERGVI DDNEL+  +CYAAKTTLTALGE+FEAA  IMSWLG
Sbjct: 784  SVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLG 843

Query: 87   DCAKIIASENHTVRWTTPLGLPVVQPYR 4
            DCAKIIA ENH VRWTTPLGLPVVQPYR
Sbjct: 844  DCAKIIAMENHPVRWTTPLGLPVVQPYR 871


>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
          Length = 715

 Score =  859 bits (2219), Expect = 0.0
 Identities = 421/568 (74%), Positives = 479/568 (84%)
 Frame = -2

Query: 1707 EEAEGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVGSRLIEL 1528
            EE  GD  + K+ E L KKV IL+K+Q+  Q+ +I+K QDD KPWGQ    KVG RLI++
Sbjct: 21   EETPGD--MMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQDNLVKVGCRLIQI 78

Query: 1527 LMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQGLDKTP 1348
            LMETAY+QPP  Q  DG  DIRPAF HT K +  E  K  R YGVI CDPLVR+GLDKT 
Sbjct: 79   LMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV--ETMKGSRRYGVIQCDPLVRKGLDKTA 136

Query: 1347 RHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQTIFEAL 1168
            RH             +W GY KGG+LFL SYIMRTHGA+QQREA+KR P+KQ++ +F+AL
Sbjct: 137  RHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQAL 196

Query: 1167 DTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAWKLKMRF 988
            DTLG+TKWRVN+ VL IV+RIW+SGG +A LVDRE +PLPE PDTEDE E+R WK K++ 
Sbjct: 197  DTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTEDEAEIRKWKWKVKG 256

Query: 987  VKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRG 808
            VKKEN ERHS+RCD+ELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLGSDLCRG
Sbjct: 257  VKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 316

Query: 807  ILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSADRPLEGE 628
            ILEFAEGRPLG SGLRWLKIHLAN+Y GGVDKLSY+GR+AF+E+HLEDIFDSA+RPLEG+
Sbjct: 317  ILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDSAERPLEGK 376

Query: 627  RWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGRDKLGAI 448
            RWWLGAE P QCLA CIN+AEALRS SPET IS++ +HQDGSCNGLQHYAALGRDKLGA 
Sbjct: 377  RWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKLGAA 436

Query: 447  AVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLVKQTVMT 268
            AVNLV GDKPADVYSGIAARV +IM+RDA +DPA +P+ +RA+LL  QVDRKLVKQTVMT
Sbjct: 437  AVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVMT 496

Query: 267  SVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHRIMSWLG 88
            SVYGVTY+GAR+QIKKRLKERGVI DDNEL+  +CYAAKTTLTALGE+FEAA  IMSWLG
Sbjct: 497  SVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLG 556

Query: 87   DCAKIIASENHTVRWTTPLGLPVVQPYR 4
            DCAKIIA ENH VRWTTPLGLPVVQPYR
Sbjct: 557  DCAKIIAMENHPVRWTTPLGLPVVQPYR 584


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score =  858 bits (2217), Expect = 0.0
 Identities = 421/568 (74%), Positives = 478/568 (84%)
 Frame = -2

Query: 1707 EEAEGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVGSRLIEL 1528
            EE  GD  + K+ E L KKV IL+K+Q+  Q+ +I+K QDD KPWGQ    KVG RLI++
Sbjct: 308  EETPGD--MMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQDNLVKVGCRLIQI 365

Query: 1527 LMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQGLDKTP 1348
            LMETAY+QPP  Q  DG  DIRPAF HT K +  E  K  R YGVI CDPLVR+GLDKT 
Sbjct: 366  LMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV--ETMKGSRRYGVIQCDPLVRKGLDKTA 423

Query: 1347 RHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQTIFEAL 1168
            RH             +W GY KGG+LFL SYIMRTHGA+QQREA+KR P+KQ++ +F+AL
Sbjct: 424  RHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQAL 483

Query: 1167 DTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAWKLKMRF 988
            DTLG+TKWRVN+ VL IV RIW+SGG +A LVDRE +PLPE PDTEDE E+R WK K++ 
Sbjct: 484  DTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDREDVPLPEAPDTEDEAEIRKWKWKVKG 543

Query: 987  VKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRG 808
            VKKEN ERHS+RCD+ELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHP+LNHLGSDLCRG
Sbjct: 544  VKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 603

Query: 807  ILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSADRPLEGE 628
            ILEFAEGRPLG SGLRWLKIHLAN+Y GGVDKLSY+GR+AF+E+HLEDIFDSA+RPLEG+
Sbjct: 604  ILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDSAERPLEGK 663

Query: 627  RWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGRDKLGAI 448
            RWWLGAE P QCLA CIN+AEALRS SPET IS++ +HQDGSCNGLQHYAALGRDKLGA 
Sbjct: 664  RWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKLGAA 723

Query: 447  AVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLVKQTVMT 268
            AVNLV GDKPADVYSGIAARV +IM+RDA +DPA +P+ +RA+LL  QVDRKLVKQTVMT
Sbjct: 724  AVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVMT 783

Query: 267  SVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHRIMSWLG 88
            SVYGVTY+GAR+QIKKRLKERGVI DDNEL+  +CYAAKTTLTALGE+FEAA  IMSWLG
Sbjct: 784  SVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLG 843

Query: 87   DCAKIIASENHTVRWTTPLGLPVVQPYR 4
            DCAKIIA ENH VRWTTPLGLPVVQPYR
Sbjct: 844  DCAKIIAMENHPVRWTTPLGLPVVQPYR 871


>emb|CBL87031.1| RNA polymerase [Nuphar advena]
          Length = 990

 Score =  853 bits (2204), Expect = 0.0
 Identities = 415/565 (73%), Positives = 480/565 (84%)
 Frame = -2

Query: 1698 EGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVGSRLIELLME 1519
            E  +TV+K+ EFL KKV  L+K+Q+  Q+ +++K +DD  PWG  A AKVG  LIELL+E
Sbjct: 302  EEPETVTKEKEFLRKKVTNLIKKQKLRQVTKLVKGKDDSAPWGVEAHAKVGCHLIELLIE 361

Query: 1518 TAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQGLDKTPRHX 1339
            TAY+QPP  Q+ DG  DIRPAFRH+ + + KE++   R YGVI CDPLVR+GLDKT RH 
Sbjct: 362  TAYIQPPLDQTVDGPPDIRPAFRHSLRNVSKEQSSNSRRYGVIECDPLVRKGLDKTARHT 421

Query: 1338 XXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQTIFEALDTL 1159
                       + WTGY KG HLFL SYIMRTHG+RQQREA+KR P +Q+Q+IFEALDTL
Sbjct: 422  VIPYMPMLVPPLCWTGYDKGAHLFLPSYIMRTHGSRQQREAVKRTPTQQLQSIFEALDTL 481

Query: 1158 GSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAWKLKMRFVKK 979
            GSTKWR+NK +L++VERIW+SGG +AGLVD E  PLPEKPDTEDE  LR WK  +R  KK
Sbjct: 482  GSTKWRINKRLLAVVERIWASGGNLAGLVDCEDAPLPEKPDTEDEAVLRKWKWSLRNTKK 541

Query: 978  ENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 799
            EN+E+HS+RCDVELKL+VARKMK+EEGFYYPHNLDFRGRAYPMHP+LNHLGSDLCRGILE
Sbjct: 542  ENSEKHSQRCDVELKLSVARKMKEEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 601

Query: 798  FAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSADRPLEGERWW 619
            FAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAF E+HL+DIFDSAD+PLEG RWW
Sbjct: 602  FAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFVENHLDDIFDSADKPLEGSRWW 661

Query: 618  LGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGRDKLGAIAVN 439
            LGAE P QCLA CINL+EALRSSSP+TTISH+ VHQDGSCNGLQHYAALGRDKLGA +VN
Sbjct: 662  LGAEDPFQCLAACINLSEALRSSSPDTTISHVPVHQDGSCNGLQHYAALGRDKLGAASVN 721

Query: 438  LVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLVKQTVMTSVY 259
            LV G+KPADVYSGIA+ V EIM+RD+Q+DPA NP A+RA+LL  QVDRKLVKQTVMTSVY
Sbjct: 722  LVAGEKPADVYSGIASGVLEIMRRDSQKDPANNPSAVRARLLIDQVDRKLVKQTVMTSVY 781

Query: 258  GVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHRIMSWLGDCA 79
            GVTY+GAR+QIKKRLKER VI +D +++  +CYAAKTTL AL E+F+AA  IMSWLGDCA
Sbjct: 782  GVTYIGARDQIKKRLKERDVIPED-QVFGAACYAAKTTLAALEEMFQAARGIMSWLGDCA 840

Query: 78   KIIASENHTVRWTTPLGLPVVQPYR 4
            K+IASEN +VRWTTPLGLPVVQPY+
Sbjct: 841  KVIASENESVRWTTPLGLPVVQPYK 865


>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score =  851 bits (2199), Expect = 0.0
 Identities = 410/575 (71%), Positives = 479/575 (83%)
 Frame = -2

Query: 1728 LDKEKTTEEAEGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKV 1549
            +++EK  +E E    ++K+ E L KKVN L+K+Q+  Q+  I+K Q+D KPWGQ A  KV
Sbjct: 304  IEQEKLADEQE---KLTKEQERLRKKVNKLIKRQKMQQVRGIVKEQEDLKPWGQEAHVKV 360

Query: 1548 GSRLIELLMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVR 1369
            G RLI+LLM+TAY+QPP  Q  DG  DIRPAF H  K I ++  K  R YGVI CDP+VR
Sbjct: 361  GCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTSRRYGVIECDPIVR 420

Query: 1368 QGLDKTPRHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQM 1189
            +G++KT RH            +NWTGY +G +LFL SY+MRTHGA+QQRE +KR PRKQ+
Sbjct: 421  KGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRTPRKQL 480

Query: 1188 QTIFEALDTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRA 1009
            + +FEALDTLGSTKWRVNK VL +++RIW+SGG +A LVDRE +PLPE+PDTEDE E+R 
Sbjct: 481  EPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRK 540

Query: 1008 WKLKMRFVKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHL 829
            WK K++  KKEN+ERHS+RCD+ELKLA +RKMKDEEGFYYPHNLDFRGRAYPMHP+LNHL
Sbjct: 541  WKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPMHPYLNHL 600

Query: 828  GSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSA 649
            GSD+CRGILEF+EGR LGKSGLRWLKIHLANLYAGGVDKLS+D R AFTE+H+++IFDSA
Sbjct: 601  GSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFTENHVDEIFDSA 660

Query: 648  DRPLEGERWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALG 469
            DRPLEG RWWLGAE P QCLA CINL EALRS SPETTIS++ VHQDGSCNGLQHYAALG
Sbjct: 661  DRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSCNGLQHYAALG 720

Query: 468  RDKLGAIAVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKL 289
            RDKLGA AVNLV GDKPADVYSGIAARV +IM+ DA++DPA NP+AL A+LL  QVDRKL
Sbjct: 721  RDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHARLLINQVDRKL 780

Query: 288  VKQTVMTSVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAH 109
            VKQTVMTSVYGVTYVGAR+QIK+RLKERG IADD  L+  +CYAA+TTLTALGE+FEAA 
Sbjct: 781  VKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAARTTLTALGEMFEAAR 840

Query: 108  RIMSWLGDCAKIIASENHTVRWTTPLGLPVVQPYR 4
             IMSWLG+CAK+IASEN  VRW TPLGLPVVQPYR
Sbjct: 841  SIMSWLGECAKVIASENQPVRWITPLGLPVVQPYR 875


>ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [Amborella trichopoda]
            gi|548846502|gb|ERN05778.1| hypothetical protein
            AMTR_s00006p00254180 [Amborella trichopoda]
          Length = 1006

 Score =  850 bits (2196), Expect = 0.0
 Identities = 414/574 (72%), Positives = 476/574 (82%)
 Frame = -2

Query: 1725 DKEKTTEEAEGDDTVSKDPEFLWKKVNILLKQQRPHQIGRILKCQDDWKPWGQIAQAKVG 1546
            DKEK  +  E ++   K+ E L K+V  L+K+Q+ HQ+ +I+K QDD KPWG    AKVG
Sbjct: 303  DKEKKLDGEEPNEG-DKEKESLRKRVTNLMKKQKLHQVRKIVKGQDDAKPWGIDIHAKVG 361

Query: 1545 SRLIELLMETAYVQPPASQSADGLVDIRPAFRHTRKAIIKEETKLRRVYGVIVCDPLVRQ 1366
            SRLIELL+ETAYVQPP  QSA+G  DIRPAFRH  K + K + K+RR YGVI CDPL+ +
Sbjct: 362  SRLIELLIETAYVQPPVDQSAEGPPDIRPAFRHILKTVTKNDQKIRRRYGVIECDPLICK 421

Query: 1365 GLDKTPRHXXXXXXXXXXXXVNWTGYAKGGHLFLSSYIMRTHGARQQREAIKRAPRKQMQ 1186
            GL+KT RH            V WTGY +GGHLFL SY+MR HGARQQR AIK APRKQ+ 
Sbjct: 422  GLEKTARHMVIPYMPMLVPPVKWTGYDRGGHLFLPSYVMRIHGARQQRYAIKHAPRKQLL 481

Query: 1185 TIFEALDTLGSTKWRVNKGVLSIVERIWSSGGCIAGLVDREVIPLPEKPDTEDETELRAW 1006
             ++EALDTLG+TKWRVNK VL +++RIW+ GG +A LVDRE + +PEKPDTEDE ++R W
Sbjct: 482  KVYEALDTLGTTKWRVNKRVLGVIDRIWADGGRLADLVDREDVAIPEKPDTEDEAKIREW 541

Query: 1005 KLKMRFVKKENNERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLG 826
            K  ++  +K+N+E HS+RCD ELKL VAR+MKDEEGF+YPHNLDFRGRAYPMHP+LNHLG
Sbjct: 542  KWLVKGARKKNSELHSQRCDTELKLNVARRMKDEEGFHYPHNLDFRGRAYPMHPYLNHLG 601

Query: 825  SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTESHLEDIFDSAD 646
            SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRL F E+HLEDIFDSAD
Sbjct: 602  SDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRLEFVENHLEDIFDSAD 661

Query: 645  RPLEGERWWLGAEGPLQCLAVCINLAEALRSSSPETTISHISVHQDGSCNGLQHYAALGR 466
            RPLEG RWWLGAE P QCLA C+NL+EALRSSSP+TTISH+ VHQDGSCNGLQHYAALGR
Sbjct: 662  RPLEGGRWWLGAEDPFQCLAACVNLSEALRSSSPDTTISHMPVHQDGSCNGLQHYAALGR 721

Query: 465  DKLGAIAVNLVDGDKPADVYSGIAARVHEIMQRDAQEDPAKNPDALRAKLLAAQVDRKLV 286
            DKLGAIAVNLV G+KPADVYSGIA RV +IM+RD+Q+DP  +P+  RAKLL  QVDRKLV
Sbjct: 722  DKLGAIAVNLVAGEKPADVYSGIAERVLDIMRRDSQKDPTSDPNVARAKLLLNQVDRKLV 781

Query: 285  KQTVMTSVYGVTYVGAREQIKKRLKERGVIADDNELYICSCYAAKTTLTALGEIFEAAHR 106
            KQTVMTSVYGVTYVGAR+QI +RLKERG I D+ EL+  SCY AK TLTALGE+F+AA  
Sbjct: 782  KQTVMTSVYGVTYVGARDQIMRRLKERGAITDEKELFSASCYTAKVTLTALGEMFQAARS 841

Query: 105  IMSWLGDCAKIIASENHTVRWTTPLGLPVVQPYR 4
            IMSWLGDCAK+IASEN TVRWTTPLGLPVVQPYR
Sbjct: 842  IMSWLGDCAKVIASENETVRWTTPLGLPVVQPYR 875