BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00023016
         (499 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containi...   199   4e-49
emb|CBI35666.3| unnamed protein product [Vitis vinifera]              199   4e-49
emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]   199   4e-49
gb|ESW29077.1| hypothetical protein PHAVU_002G041500g [Phaseolus...   197   9e-49
ref|XP_004310241.1| PREDICTED: pentatricopeptide repeat-containi...   196   4e-48
ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containi...   196   4e-48
gb|EOX99645.1| Pentatricopeptide repeat (PPR) superfamily protei...   193   2e-47
ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containi...   192   4e-47
ref|XP_006399818.1| hypothetical protein EUTSA_v10012768mg [Eutr...   187   1e-45
ref|XP_002873605.1| pentatricopeptide repeat-containing protein ...   186   2e-45
ref|XP_006290013.1| hypothetical protein CARUB_v10003644mg [Caps...   186   4e-45
ref|XP_002299342.1| predicted protein [Populus trichocarpa]           186   4e-45
ref|NP_196831.1| protein required for accD RNA editing 1 [Arabid...   182   5e-44
ref|XP_002512657.1| pentatricopeptide repeat-containing protein,...   179   3e-43
gb|EPS68237.1| hypothetical protein M569_06531 [Genlisea aurea]       174   8e-42
ref|XP_006368854.1| hypothetical protein POPTR_0001s13120g [Popu...   157   2e-36
ref|XP_006651199.1| PREDICTED: pentatricopeptide repeat-containi...   135   7e-30
gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indi...   135   7e-30
ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group] g...   135   7e-30
ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containi...   134   2e-29

>ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Vitis vinifera]
          Length = 835

 Score =  199 bits (505), Expect = 4e-49
 Identities = 96/166 (57%), Positives = 122/166 (73%)
 Frame = +2

Query: 2   RMFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           ++F  LRS  + LNSFIY+S+FQA           Q H DAIKR L+S L G+SA+VTMY
Sbjct: 376 KIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMY 435

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFI 361
           ++CG + YA++AFE I EPD VAWTAII+G +YHG A+EAL FF  M S  V+PNA+TFI
Sbjct: 436 SKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFI 495

Query: 362 GLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
            +L ACSH+GLV+ AK+YL SM   YGV+ T+DHY+CM+D Y RAG
Sbjct: 496 AVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAG 541



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 43/166 (25%), Positives = 78/166 (46%)
 Frame = +2

Query: 2   RMFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           R+F  +++  I  NS +Y SL Q+           Q+H+  I+  L +N+  ++A+  MY
Sbjct: 174 RLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMY 233

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFI 361
            RCG ++ A+  F+ +   + V WT ++ G +   +   AL+ F  M    V+ +   F 
Sbjct: 234 VRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFS 293

Query: 362 GLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
            +L  C       + ++ + S  V  G E+ V     +VD Y + G
Sbjct: 294 IVLKVCCGLEDWDMGRQ-IHSHIVKLGAESEVSVGTPLVDFYVKCG 338



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +F  +    + L+ F++S + +            Q+H+  +K    S +   + LV  Y 
Sbjct: 276 LFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYV 335

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +CGD++ A ++F  I+EP+ V+W+A+I+G S  G+  + +  F  + S  V  N+  +  
Sbjct: 336 KCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTS 395

Query: 365 LLNACSHTGLVSLAKE-YLDSMYVG-----YGVEATVDHYN 469
           +  AC+    +++  + + D++  G     YG  A V  Y+
Sbjct: 396 VFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYS 436



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
 Frame = +2

Query: 11  KFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVG--DSALVTMYA 184
           K +   ++++    Y  LF+A            +H D ++R  + N  G  ++ L+ MY 
Sbjct: 76  KEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIH-DRLRRT-VKNPSGSIENCLLRMYC 133

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
            CG     QK F+ +   + V+W  +I+  + +G+  +A+  F  M +  ++PN+  ++ 
Sbjct: 134 DCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMS 193

Query: 365 LLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           LL +C     + L K+ + S  +   + A +     + ++Y R G
Sbjct: 194 LLQSCLGPSFLELGKQ-IHSHVIRAQLNANITVETAICNMYVRCG 237


>emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  199 bits (505), Expect = 4e-49
 Identities = 96/166 (57%), Positives = 122/166 (73%)
 Frame = +2

Query: 2   RMFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           ++F  LRS  + LNSFIY+S+FQA           Q H DAIKR L+S L G+SA+VTMY
Sbjct: 376 KIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMY 435

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFI 361
           ++CG + YA++AFE I EPD VAWTAII+G +YHG A+EAL FF  M S  V+PNA+TFI
Sbjct: 436 SKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFI 495

Query: 362 GLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
            +L ACSH+GLV+ AK+YL SM   YGV+ T+DHY+CM+D Y RAG
Sbjct: 496 AVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAG 541



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 43/166 (25%), Positives = 78/166 (46%)
 Frame = +2

Query: 2   RMFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           R+F  +++  I  NS +Y SL Q+           Q+H+  I+  L +N+  ++A+  MY
Sbjct: 174 RLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMY 233

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFI 361
            RCG ++ A+  F+ +   + V WT ++ G +   +   AL+ F  M    V+ +   F 
Sbjct: 234 VRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFS 293

Query: 362 GLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
            +L  C       + ++ + S  V  G E+ V     +VD Y + G
Sbjct: 294 IVLKVCCGLEDWDMGRQ-IHSHIVKLGAESEVSVGTPLVDFYVKCG 338



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +F  +    + L+ F++S + +            Q+H+  +K    S +   + LV  Y 
Sbjct: 276 LFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYV 335

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +CGD++ A ++F  I+EP+ V+W+A+I+G S  G+  + +  F  + S  V  N+  +  
Sbjct: 336 KCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTS 395

Query: 365 LLNACSHTGLVSLAKE-YLDSMYVG-----YGVEATVDHYN 469
           +  AC+    +++  + + D++  G     YG  A V  Y+
Sbjct: 396 VFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYS 436



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
 Frame = +2

Query: 11  KFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVG--DSALVTMYA 184
           K +   ++++    Y  LF+A            +H D ++R  + N  G  ++ L+ MY 
Sbjct: 76  KEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIH-DRLRRT-VKNPSGSIENCLLRMYC 133

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
            CG     QK F+ +   + V+W  +I+  + +G+  +A+  F  M +  ++PN+  ++ 
Sbjct: 134 DCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMS 193

Query: 365 LLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           LL +C     + L K+ + S  +   + A +     + ++Y R G
Sbjct: 194 LLQSCLGPSFLELGKQ-IHSHVIRAQLNANITVETAICNMYVRCG 237


>emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  199 bits (505), Expect = 4e-49
 Identities = 96/166 (57%), Positives = 122/166 (73%)
 Frame = +2

Query: 2   RMFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           ++F  LRS  + LNSFIY+S+FQA           Q H DAIKR L+S L G+SA+VTMY
Sbjct: 376 KIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMY 435

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFI 361
           ++CG + YA++AFE I EPD VAWTAII+G +YHG A+EAL FF  M S  V+PNA+TFI
Sbjct: 436 SKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFI 495

Query: 362 GLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
            +L ACSH+GLV+ AK+YL SM   YGV+ T+DHY+CM+D Y RAG
Sbjct: 496 AVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAG 541



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 44/166 (26%), Positives = 78/166 (46%)
 Frame = +2

Query: 2   RMFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           R+F  +++  I  NS +Y SL Q+           Q+H+  I+  L +N+  ++A+  MY
Sbjct: 174 RLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMY 233

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFI 361
            RCG ++ A+  F+ +   + V WT ++ G +   +   AL+ F  M    V+ +   F 
Sbjct: 234 VRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFS 293

Query: 362 GLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
            +L  C       + K+ + S  V  G E+ V     +VD Y + G
Sbjct: 294 IVLKVCCXLEDWDMGKQ-IHSHIVKLGXESEVSVGTPLVDFYVKCG 338



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +F  +    + L+ F++S + +            Q+H+  +K    S +   + LV  Y 
Sbjct: 276 LFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYV 335

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +CGD++ A ++F  I+EP+ V+W+A+I+G S  G+  + +  F  + S  V  N+  +  
Sbjct: 336 KCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTS 395

Query: 365 LLNACSHTGLVSLAKE-YLDSMYVG-----YGVEATVDHYN 469
           +  AC+    +++  + + D++  G     YG  A V  Y+
Sbjct: 396 VFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYS 436



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
 Frame = +2

Query: 11  KFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVG--DSALVTMYA 184
           K +   ++++    Y  LF+A            +H D ++R  + N  G  ++ L+ MY 
Sbjct: 76  KEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIH-DRLRRT-VKNPSGSIENCLLRMYC 133

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
            CG     QK F+ +   + V+W  +I+  + +G+  +A+  F  M +  ++PN+  ++ 
Sbjct: 134 DCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMS 193

Query: 365 LLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           LL +C     + L K+ + S  +   + A +     + ++Y R G
Sbjct: 194 LLQSCLGPSFLELGKQ-MHSHVIRAQLNANITVETAICNMYVRCG 237


>gb|ESW29077.1| hypothetical protein PHAVU_002G041500g [Phaseolus vulgaris]
          Length = 765

 Score =  197 bits (502), Expect = 9e-49
 Identities = 95/165 (57%), Positives = 121/165 (73%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +FK LRS+ + LNSFIY+++FQA           Q+HADAIK+ L+S L G+SA++TMY+
Sbjct: 381 VFKTLRSKGVLLNSFIYTNMFQACSGLSDLICGSQIHADAIKKGLVSFLSGESAMITMYS 440

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +CG + YA +AF  I +PDT+AWTAII   +YHG+ASEAL  F  M    VKPNAITFIG
Sbjct: 441 KCGKVDYAHQAFLTIDKPDTIAWTAIICAHAYHGKASEALRLFKEMQGSGVKPNAITFIG 500

Query: 365 LLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           LLNACSH+GLV   K++LDSM   YGV   +DHYNCM+D+Y RAG
Sbjct: 501 LLNACSHSGLVKEGKQFLDSMSDKYGVNPIIDHYNCMIDIYSRAG 545



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 1/166 (0%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +F  + S    L+ F++S + +A           ++H+  IK  L S +   + LV  Y 
Sbjct: 280 LFAKMISEGAELDEFVFSIVLKACAALGDLYTGRKIHSYCIKLGLESEVSVGTPLVDFYV 339

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +C     A++AFE I EP+  +W+A+I G    G+   AL+ F  + S  V  N+  +  
Sbjct: 340 KCARFDAARRAFETICEPNDYSWSALIVGYCQSGRFDTALEVFKTLRSKGVLLNSFIYTN 399

Query: 365 LLNACSH-TGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           +  ACS  + L+  ++ + D+  +  G+ + +   + M+ +Y + G
Sbjct: 400 MFQACSGLSDLICGSQIHADA--IKKGLVSFLSGESAMITMYSKCG 443


>ref|XP_004310241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 837

 Score =  196 bits (497), Expect = 4e-48
 Identities = 94/165 (56%), Positives = 121/165 (73%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +F+ L  + +TLN +IY+S+FQA           QVHADAIKR  ++ L G SA++TMY+
Sbjct: 384 IFQTLIGKGVTLNPYIYTSIFQACSAVADINFGAQVHADAIKRGFVAFLYGASAMITMYS 443

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +CG + YA +AFE I +PDTVAWTAII G +YHG ASEAL  F  M +  +KPN++TFI 
Sbjct: 444 KCGRLDYAYQAFESIDKPDTVAWTAIICGYAYHGNASEALRLFSRMQNSGIKPNSVTFIA 503

Query: 365 LLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           +L ACSH+GLV+ AK+YLDSMY  Y VE TVDHY+CM+DVY RAG
Sbjct: 504 VLTACSHSGLVTEAKQYLDSMYSVYNVEPTVDHYDCMIDVYSRAG 548



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 43/153 (28%), Positives = 79/153 (51%), Gaps = 6/153 (3%)
 Frame = +2

Query: 29  NITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYARCGDMQYA 208
           ++ ++ F++S + +A           Q+H  ++K  L S +   + LV  Y +CG+ + A
Sbjct: 291 SVEVDDFVFSIVLKACAGLEELNAGRQIHGYSVKLGLDSEVSVGTPLVDFYVKCGEFESA 350

Query: 209 QKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIGLLNACSHT 388
           ++AF+ I EP+ V+W+AII+G   +GQ  E L+ F  +I   V  N   +  +  ACS  
Sbjct: 351 RRAFKRIDEPNDVSWSAIISGYCQNGQFEECLEIFQTLIGKGVTLNPYIYTSIFQACSAV 410

Query: 389 GLVSL-AKEYLDSMYVG-----YGVEATVDHYN 469
             ++  A+ + D++  G     YG  A +  Y+
Sbjct: 411 ADINFGAQVHADAIKRGFVAFLYGASAMITMYS 443


>ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  196 bits (497), Expect = 4e-48
 Identities = 92/165 (55%), Positives = 121/165 (73%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +FK +RS+ + LNSFIY+++FQA           Q+HADAIK+ L++ L G+SA++TMY+
Sbjct: 369 VFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYS 428

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +CG + YA +AF  I +PDTVAWTAII   +YHG+ASEAL  F  M    V+PN +TFIG
Sbjct: 429 KCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIG 488

Query: 365 LLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           LLNACSH+GLV   K++LDSM   YGV  T+DHYNCM+D+Y RAG
Sbjct: 489 LLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAG 533



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +F  + S  + L+ F++S + +A           Q+H+  IK  L S +   + LV  Y 
Sbjct: 268 LFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYV 327

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +C   + A++AFE I EP+  +W+A+I G    G+   AL+ F  + S  V  N+  +  
Sbjct: 328 KCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNN 387

Query: 365 LLNACSH-TGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           +  ACS  + L+  A+ + D+  +  G+ A +   + M+ +Y + G
Sbjct: 388 IFQACSAVSDLICGAQIHADA--IKKGLVAYLSGESAMITMYSKCG 431


>gb|EOX99645.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 762

 Score =  193 bits (491), Expect = 2e-47
 Identities = 93/166 (56%), Positives = 121/166 (72%)
 Frame = +2

Query: 2   RMFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           ++FK LR ++++LNSF+Y+S+FQA           QVHAD+IKR LIS L G+SA++TMY
Sbjct: 377 KIFKSLRIKDVSLNSFVYTSIFQACSVLADFNVGAQVHADSIKRGLISYLYGESAMITMY 436

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFI 361
           ++CG + YA +AFE I EPDTVAWTA I G +YHG ASEAL  F  M    V+PN +TF+
Sbjct: 437 SKCGRLDYANRAFESIDEPDTVAWTANICGHAYHGNASEALRLFRRMQDSGVRPNEVTFV 496

Query: 362 GLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
            +L ACSH+GLV+ AK YL+SM   YGV  T+DHY CM+D+Y RAG
Sbjct: 497 AVLTACSHSGLVTEAKLYLESMSREYGVRPTIDHYACMIDIYSRAG 542



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/151 (27%), Positives = 77/151 (50%)
 Frame = +2

Query: 41  NSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYARCGDMQYAQKAF 220
           NS I++ L ++           Q+H+  I+  L +N+   +A+  MYA+CG ++ A+   
Sbjct: 188 NSTIFTRLLKSLFDPSVLEIGKQIHSLLIRTGLSTNVSVITAISNMYAKCGWLEGAKLVM 247

Query: 221 ELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIGLLNACSHTGLVS 400
             + E + VAWT ++ GC+   +  +AL+ F  M+   VK +   F  +L AC+    ++
Sbjct: 248 GQMVEKNAVAWTGLMMGCTQADKQKDALELFGKMVKEGVKLDGFVFSVVLKACAGLEDLN 307

Query: 401 LAKEYLDSMYVGYGVEATVDHYNCMVDVYCR 493
           L ++ +    V  G E+ V     +VD+Y +
Sbjct: 308 LGRQ-IHGYVVKLGFESDVFVGTPVVDLYVK 337



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +F  +    + L+ F++S + +A           Q+H   +K    S++   + +V +Y 
Sbjct: 277 LFGKMVKEGVKLDGFVFSVVLKACAGLEDLNLGRQIHGYVVKLGFESDVFVGTPVVDLYV 336

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +C   + A +AFE I+EP+ V+W+AI+TG    G+  ++L  F  +   +V  N+  +  
Sbjct: 337 KCAWFESACRAFERISEPNDVSWSAIVTGYCQVGKFEKSLKIFKSLRIKDVSLNSFVYTS 396

Query: 365 LLNACSHTGLVSL-AKEYLDSMYVG-----YGVEATVDHYN 469
           +  ACS     ++ A+ + DS+  G     YG  A +  Y+
Sbjct: 397 IFQACSVLADFNVGAQVHADSIKRGLISYLYGESAMITMYS 437


>ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  192 bits (488), Expect = 4e-47
 Identities = 92/165 (55%), Positives = 120/165 (72%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +FK +RS+ + LNSFIY+++FQA           Q+HADAIK+ L++ L G+SA+++MY+
Sbjct: 381 VFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYS 440

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +CG + YA +AF  I +PDTVAWTAII   +YHG+A EAL  F  M    V+PNA+TFIG
Sbjct: 441 KCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIG 500

Query: 365 LLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           LLNACSH+GLV   K+ LDSM   YGV  T+DHYNCM+DVY RAG
Sbjct: 501 LLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAG 545



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +F  + S  + L+ F++S + +A           Q+H+  IK  L S +   + LV  Y 
Sbjct: 280 LFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYV 339

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +C   + A++AFE I EP+  +W+A+I G    GQ   AL+ F  + S  V  N+  +  
Sbjct: 340 KCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTN 399

Query: 365 LLNACSH-TGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           +  ACS  + L+  A+ + D+  +  G+ A +   + M+ +Y + G
Sbjct: 400 IFQACSAVSDLICGAQIHADA--IKKGLVAYLSGESAMISMYSKCG 443



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 43/164 (26%), Positives = 78/164 (47%)
 Frame = +2

Query: 2   RMFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           R+F  +    IT NS I+S+L  +           Q+H+  I+    +N+  ++ +  MY
Sbjct: 178 RLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMY 237

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFI 361
            +CG +  A+ A   +   + VA T ++ G +   +  +AL  F  MIS  V+ +   F 
Sbjct: 238 VKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFS 297

Query: 362 GLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCR 493
            +L AC+  G +   K+ + S  +  G+E+ V     +VD Y +
Sbjct: 298 IILKACAALGDLYTGKQ-IHSYCIKLGLESEVSVGTPLVDFYVK 340



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 3/166 (1%)
 Frame = +2

Query: 11  KFLRSRN---ITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           +F+R+ +   I++N   Y  LF+              H + ++R   SN   D+ ++ MY
Sbjct: 78  EFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFH-NRLQRMANSNKFIDNCILKMY 136

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFI 361
             C     A++ F+ I + D  +W+ II+  +  G+  EA+  F  M+   + PN+  F 
Sbjct: 137 CDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFS 196

Query: 362 GLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
            L+ + +   ++ L K+ + S  +  G  A +     + ++Y + G
Sbjct: 197 TLIMSFTDPSMLDLGKQ-IHSQLIRIGFAANISIETLISNMYVKCG 241


>ref|XP_006399818.1| hypothetical protein EUTSA_v10012768mg [Eutrema salsugineum]
           gi|557100908|gb|ESQ41271.1| hypothetical protein
           EUTSA_v10012768mg [Eutrema salsugineum]
          Length = 750

 Score =  187 bits (475), Expect = 1e-45
 Identities = 90/167 (53%), Positives = 118/167 (70%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   RMFKFLRSRNIT-LNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTM 178
           + FK LRS+N   LNSF Y+S+FQA           QVHADAIKR LI +  G+SAL+TM
Sbjct: 370 KTFKSLRSKNAAVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITM 429

Query: 179 YARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITF 358
           Y++CG +  A + FE +  PD VAWTA I+G +Y+G ASEAL  F+ M+SC +KPN++TF
Sbjct: 430 YSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALKLFEKMVSCGMKPNSVTF 489

Query: 359 IGLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           I +L ACSH GLV+  K+YLD+M   Y V  T+DHY+CM+D+Y RAG
Sbjct: 490 IAVLTACSHAGLVAQGKDYLDTMLRKYNVAPTIDHYDCMIDIYSRAG 536



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
 Frame = +2

Query: 2   RMFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           ++F    S     ++F++S + ++           Q+HA   K  L S +   + LV  Y
Sbjct: 269 KLFADFVSEGGNWDNFVFSVVLKSCASLEEINLGKQIHACVAKLGLESEVSVGTPLVDFY 328

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKP-NAITF 358
            +C   + A +AFE I EP+ V W+AII+G     Q  EA+  F  + S N    N+ T+
Sbjct: 329 IKCSSFESACRAFEKICEPNDVTWSAIISGYCQMSQFEEAIKTFKSLRSKNAAVLNSFTY 388

Query: 359 IGLLNACS 382
             +  ACS
Sbjct: 389 TSIFQACS 396



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/150 (25%), Positives = 74/150 (49%)
 Frame = +2

Query: 44  SFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYARCGDMQYAQKAFE 223
           S +Y++L ++           QVH   I+  L SN   ++ ++ MY +CG +  A+  F+
Sbjct: 182 SSVYTTLLKSLVNPSALDIGRQVHGHVIRAGLCSNPSIEAGILNMYVKCGWLVGAKLVFD 241

Query: 224 LIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIGLLNACSHTGLVSL 403
            +A   +VAWT ++ G +  G++ +AL  F   +S     +   F  +L +C+    ++L
Sbjct: 242 QMAVKKSVAWTGLMIGYTQAGRSRDALKLFADFVSEGGNWDNFVFSVVLKSCASLEEINL 301

Query: 404 AKEYLDSMYVGYGVEATVDHYNCMVDVYCR 493
            K+ + +     G+E+ V     +VD Y +
Sbjct: 302 GKQ-IHACVAKLGLESEVSVGTPLVDFYIK 330


>ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319442|gb|EFH49864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 750

 Score =  186 bits (473), Expect = 2e-45
 Identities = 89/167 (53%), Positives = 117/167 (70%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   RMFKFLRSRN-ITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTM 178
           + FK LRS+N + LNSF Y+S+FQA           QVHADAIKR LI +  G+SAL+TM
Sbjct: 370 KTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITM 429

Query: 179 YARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITF 358
           Y++CG +  A + FE +  PD VAWTA I+G +Y+G ASEAL  F+ M+SC +KPN++TF
Sbjct: 430 YSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTF 489

Query: 359 IGLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           I +L ACSH GLV   K YLD+M   Y V  T+DHY+CM+D+Y R+G
Sbjct: 490 IAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSG 536



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/150 (27%), Positives = 76/150 (50%)
 Frame = +2

Query: 44  SFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYARCGDMQYAQKAFE 223
           S +Y++L ++           Q+HA  I+  L SN   ++ +V MY +CG +  A++ F+
Sbjct: 182 SSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFD 241

Query: 224 LIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIGLLNACSHTGLVSL 403
            +A    VAWT ++ G +  G+A +AL  F  +I+  V+ ++  F  +L AC+    +  
Sbjct: 242 QMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRF 301

Query: 404 AKEYLDSMYVGYGVEATVDHYNCMVDVYCR 493
            K+ + +     G+E  V     +VD Y +
Sbjct: 302 GKQ-IHACVAKLGLECEVSVGTPLVDFYIK 330



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
 Frame = +2

Query: 2   RMFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           ++F  L +  +  +SF++S + +A           Q+HA   K  L   +   + LV  Y
Sbjct: 269 KLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFY 328

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCN-VKPNAITF 358
            +C   + A +AF+ I EP+ V+W+AII+G     Q  EA+  F  + S N V  N+ T+
Sbjct: 329 IKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTY 388

Query: 359 IGLLNACS 382
             +  ACS
Sbjct: 389 TSIFQACS 396


>ref|XP_006290013.1| hypothetical protein CARUB_v10003644mg [Capsella rubella]
           gi|482558719|gb|EOA22911.1| hypothetical protein
           CARUB_v10003644mg [Capsella rubella]
          Length = 752

 Score =  186 bits (471), Expect = 4e-45
 Identities = 90/167 (53%), Positives = 116/167 (69%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   RMFKFLRSRNIT-LNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTM 178
           + FK LRS+N   LNSF Y+S+FQA           QVHADAIKR LI +  G+SAL+TM
Sbjct: 372 KTFKSLRSKNAAVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITM 431

Query: 179 YARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITF 358
           Y++CG +  A + FE +  PD VAWTA ++G +Y+G ASEAL  F+ M+SC +KPN+ITF
Sbjct: 432 YSKCGCLDDAHEVFESMDNPDIVAWTAFLSGHAYYGNASEALRLFEKMVSCGMKPNSITF 491

Query: 359 IGLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           I +L ACSH GLV   K YLD+M   Y V  T+DHY+CM+D+Y RAG
Sbjct: 492 IAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARAG 538



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 38/150 (25%), Positives = 77/150 (51%)
 Frame = +2

Query: 44  SFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYARCGDMQYAQKAFE 223
           S +Y++L ++           Q+HA  ++  L +N   +  ++ MY +CG +  A++ F+
Sbjct: 184 SSMYTTLLKSLINPEALDVGRQIHAHVMRAGLCNNTSIEIGILNMYVKCGWLVGAKRVFD 243

Query: 224 LIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIGLLNACSHTGLVSL 403
            +A+   VAWT ++ G +  G+A +AL  F  ++   V+ ++  F  +L AC+    + L
Sbjct: 244 QMAQKKPVAWTGLMVGYTQAGRARDALKLFVELVIEGVEWDSFVFSVVLKACASLEELKL 303

Query: 404 AKEYLDSMYVGYGVEATVDHYNCMVDVYCR 493
            K+ + +     G+E+ V     +VD Y +
Sbjct: 304 GKQ-IHACVAKLGLESEVSVGTPLVDFYIK 332



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
 Frame = +2

Query: 2   RMFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           ++F  L    +  +SF++S + +A           Q+HA   K  L S +   + LV  Y
Sbjct: 271 KLFVELVIEGVEWDSFVFSVVLKACASLEELKLGKQIHACVAKLGLESEVSVGTPLVDFY 330

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKP-NAITF 358
            +C   + A  AF+ I+EP+ V W+AII+G     Q  EA+  F  + S N    N+ T+
Sbjct: 331 IKCSSFESACCAFQEISEPNDVTWSAIISGYCQMSQFEEAVKTFKSLRSKNAAVLNSFTY 390

Query: 359 IGLLNACS 382
             +  ACS
Sbjct: 391 TSIFQACS 398


>ref|XP_002299342.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  186 bits (471), Expect = 4e-45
 Identities = 87/166 (52%), Positives = 115/166 (69%)
 Frame = +2

Query: 2   RMFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           + F+ LR+R++ +NSF Y+S+FQA           Q HADAIK  L++   G+SA++TMY
Sbjct: 299 KTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMY 358

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFI 361
           +RCG + YA + FE I +PD VAWTAII G +Y G A EAL  F  M  C V+PNA+TFI
Sbjct: 359 SRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFI 418

Query: 362 GLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
            +L ACSH+GLV   ++YL+SM   YGV  T+DHY+CMVD+Y RAG
Sbjct: 419 AVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAG 464



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 38/126 (30%), Positives = 69/126 (54%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +F  + +  + L+ +++S + +A           Q+H   +K  L S +   + LV  Y 
Sbjct: 199 LFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYV 258

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +C +++ A KAFE I+EP+ V+W+A+ITG    G+  EAL  F+ + + +V  N+ T+  
Sbjct: 259 KCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTS 318

Query: 365 LLNACS 382
           +  ACS
Sbjct: 319 IFQACS 324



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 38/129 (29%), Positives = 70/129 (54%)
 Frame = +2

Query: 107 QVHADAIKRCLISNLVGDSALVTMYARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHG 286
           Q+H+ AI+  L SN   ++A+  MY +CG ++ A+  FE ++E + VAWT I+ G +   
Sbjct: 132 QIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAE 191

Query: 287 QASEALDFFDMMISCNVKPNAITFIGLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHY 466
           +  +AL  F  M++  V+ +   F  +L AC+    ++  ++ +    V  G+E+ V   
Sbjct: 192 RQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQ-IHGHIVKLGLESEVSVG 250

Query: 467 NCMVDVYCR 493
             +VD Y +
Sbjct: 251 TPLVDFYVK 259



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
 Frame = +2

Query: 158 DSALVTMYARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNV 337
           +++++ MY +CG +  A+K F+ + E + V+W  II+  + +G   +    F  M+    
Sbjct: 48  ENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELET 107

Query: 338 KPNAITFIGLLNACSHTGLVSLAKE-YLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           KPN  T+IG L +  +   + + K+ +  ++  G G  A+V+    + ++Y + G
Sbjct: 108 KPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVN--TAISNMYVKCG 160


>ref|NP_196831.1| protein required for accD RNA editing 1 [Arabidopsis thaliana]
           gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
           gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis
           thaliana] gi|332004490|gb|AED91873.1| protein required
           for accD RNA editing 1 [Arabidopsis thaliana]
          Length = 752

 Score =  182 bits (461), Expect = 5e-44
 Identities = 88/167 (52%), Positives = 116/167 (69%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   RMFKFLRSRNIT-LNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTM 178
           + FK LRS+N + LNSF Y+S+FQA           QVHADAIKR LI +  G+SAL+TM
Sbjct: 372 KTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITM 431

Query: 179 YARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITF 358
           Y++CG +  A + FE +  PD VAWTA I+G +Y+G ASEAL  F+ M+SC +KPN++TF
Sbjct: 432 YSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTF 491

Query: 359 IGLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           I +L ACSH GLV   K  LD+M   Y V  T+DHY+CM+D+Y R+G
Sbjct: 492 IAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSG 538



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
 Frame = +2

Query: 2   RMFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           ++F  L +  +  +SF++S + +A           Q+HA   K  L S +   + LV  Y
Sbjct: 271 KLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFY 330

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVK-PNAITF 358
            +C   + A +AF+ I EP+ V+W+AII+G     Q  EA+  F  + S N    N+ T+
Sbjct: 331 IKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTY 390

Query: 359 IGLLNACS 382
             +  ACS
Sbjct: 391 TSIFQACS 398



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 40/150 (26%), Positives = 78/150 (52%)
 Frame = +2

Query: 44  SFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYARCGDMQYAQKAFE 223
           S +Y++L ++           Q+HA  I+  L SN   ++ +V MY +CG +  A++ F+
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243

Query: 224 LIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIGLLNACSHTGLVSL 403
            +A    VA T ++ G +  G+A +AL  F  +++  V+ ++  F  +L AC+    ++L
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303

Query: 404 AKEYLDSMYVGYGVEATVDHYNCMVDVYCR 493
            K+ + +     G+E+ V     +VD Y +
Sbjct: 304 GKQ-IHACVAKLGLESEVSVGTPLVDFYIK 332


>ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548618|gb|EEF50109.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 837

 Score =  179 bits (454), Expect = 3e-43
 Identities = 88/166 (53%), Positives = 114/166 (68%)
 Frame = +2

Query: 2   RMFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMY 181
           ++F+ LRS    LNSF Y+S+FQA           QVHADAIKR LI++  G+SA++TMY
Sbjct: 379 KIFESLRSNIENLNSFTYTSIFQACSALADFSTGTQVHADAIKRSLIASQHGESAMITMY 438

Query: 182 ARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFI 361
           +RCG + YA  AFE I  PD VAWTAI+ G +Y G A+EAL  F  M     +PNAITFI
Sbjct: 439 SRCGRLDYANLAFETIDGPDAVAWTAIVAGYAYQGNATEALKHFWRMQGSGARPNAITFI 498

Query: 362 GLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
            +L ACSH+GLV+  K+YLD M   YG+  T+DHY+C++D+Y RAG
Sbjct: 499 AVLTACSHSGLVAEGKQYLDLMSSKYGMAPTIDHYDCVIDIYSRAG 544



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/165 (26%), Positives = 78/165 (47%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +F  +   ++ L+ +++S   +A           Q+H   +K  L S +   + LV  Y 
Sbjct: 279 LFAKMVCEDVELDEYVFSISLKACAGLKELSFGRQIHGHIVKLGLESEVSVGTPLVDFYI 338

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +C   + A K FE I+EP+ V+W+A+ITG    G+  EAL  F+ + S     N+ T+  
Sbjct: 339 KCASFELASKVFEGISEPNDVSWSAMITGYCQIGEFEEALKIFESLRSNIENLNSFTYTS 398

Query: 365 LLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           +  ACS     S   + + +  +   + A+    + M+ +Y R G
Sbjct: 399 IFQACSALADFSTGTQ-VHADAIKRSLIASQHGESAMITMYSRCG 442



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 45/163 (27%), Positives = 79/163 (48%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +F  + S  I  NS IY  L ++           Q+H+ +I+  L + +  ++A+  MY 
Sbjct: 178 LFISMISLGINPNSSIYIDLLRSLLNPSLLGIGKQIHSHSIRSGLGAGVSINTAISNMYV 237

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           RCG +  A+     +AE + VAWT ++ G +  G+   ALD F  M+  +V+ +   F  
Sbjct: 238 RCGWLDGAELFINNMAEKNAVAWTGLMVGYTQAGKQKNALDLFAKMVCEDVELDEYVFSI 297

Query: 365 LLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCR 493
            L AC+    +S  ++ +    V  G+E+ V     +VD Y +
Sbjct: 298 SLKACAGLKELSFGRQ-IHGHIVKLGLESEVSVGTPLVDFYIK 339



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/114 (28%), Positives = 60/114 (52%)
 Frame = +2

Query: 158 DSALVTMYARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNV 337
           ++ ++ MY  C  ++ A K F+ + E + ++W  II+  + HG   +AL  F  MIS  +
Sbjct: 128 ENTVLKMYCVCESLEDAYKVFDKMIERNLISWGTIISAYAEHGLLDKALSLFISMISLGI 187

Query: 338 KPNAITFIGLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
            PN+  +I LL +  +  L+ + K+ + S  +  G+ A V     + ++Y R G
Sbjct: 188 NPNSSIYIDLLRSLLNPSLLGIGKQ-IHSHSIRSGLGAGVSINTAISNMYVRCG 240


>gb|EPS68237.1| hypothetical protein M569_06531 [Genlisea aurea]
          Length = 1003

 Score =  174 bits (442), Expect = 8e-42
 Identities = 87/167 (52%), Positives = 113/167 (67%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   RMFKFLRSRNITL-NSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTM 178
           ++FK LRS + +L N   Y+S+FQ            Q+H DAIKR LIS   G+S L+TM
Sbjct: 372 KLFKSLRSESSSLLNECTYTSVFQLCSSFADFSFGSQLHGDAIKRALISQPQGESTLITM 431

Query: 179 YARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITF 358
           YA+CG ++ A + FE I EPDTVAWTAII+GC+ HG+A EAL+ F+ M S  ++ N +TF
Sbjct: 432 YAKCGFLESALRIFESIDEPDTVAWTAIISGCASHGKALEALNLFEKMHSSGIRANEVTF 491

Query: 359 IGLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           + +  ACSH GLV  AK YL++M   YGVE  +DHYNC VDVY RAG
Sbjct: 492 VAVFTACSHAGLVDEAKRYLETMTGEYGVEPNLDHYNCAVDVYARAG 538



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
 Frame = +2

Query: 23  SRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYARCGDMQ 202
           S N+ +    Y S+ ++           Q+H   IK    SN+  D+A+  MYA+C +M+
Sbjct: 176 SDNVVVIPTTYLSVLKSFVDSSYLEVGKQIHCHVIKAGFTSNVAIDTAICNMYAKCRNME 235

Query: 203 YAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDF-FDMMISCNVKPNAITFIGLLNAC 379
            A+  F  + E +TV+WT ++ G +   +  + L +  +MM   + + +   F   L AC
Sbjct: 236 SAEMNFRRMLEKNTVSWTTMMVGYTLADRHVDTLKYLIEMMEERHSEVDEFVFSITLKAC 295

Query: 380 SHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
              G  S+  E +  M + +G+E  V     +VD Y + G
Sbjct: 296 VALGDHSMG-EQIHGMILKHGMETDVSVGTPLVDFYVKCG 334



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 35/139 (25%), Positives = 65/139 (46%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           + + +  R+  ++ F++S   +A           Q+H   +K  + +++   + LV  Y 
Sbjct: 272 LIEMMEERHSEVDEFVFSITLKACVALGDHSMGEQIHGMILKHGMETDVSVGTPLVDFYV 331

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +CG M+ A +AFE I+EP+  +W+AI+ G S  G+       F  + S            
Sbjct: 332 KCGSMESALRAFERISEPNDASWSAILCGYSQTGEFERGSKLFKSLRS--------ESSS 383

Query: 365 LLNACSHTGLVSLAKEYLD 421
           LLN C++T +  L   + D
Sbjct: 384 LLNECTYTSVFQLCSSFAD 402


>ref|XP_006368854.1| hypothetical protein POPTR_0001s13120g [Populus trichocarpa]
           gi|550347141|gb|ERP65423.1| hypothetical protein
           POPTR_0001s13120g [Populus trichocarpa]
          Length = 655

 Score =  157 bits (396), Expect = 2e-36
 Identities = 75/165 (45%), Positives = 105/165 (63%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +F  + +  + L+ +++S + +A           Q+H   +K  L S +   SA++TMY+
Sbjct: 273 LFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEV--SSAMITMYS 330

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           RCG + YA + FE I +PD VAWTAII G +Y G A EAL  F  M  C V+PNA+TFI 
Sbjct: 331 RCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIA 390

Query: 365 LLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           +L ACSH+GLV   ++YL+SM   YGV  T+DHY+CMVD+Y RAG
Sbjct: 391 VLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAG 435



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 39/131 (29%), Positives = 72/131 (54%)
 Frame = +2

Query: 107 QVHADAIKRCLISNLVGDSALVTMYARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHG 286
           Q+H+ AI+  L SN   ++A+  MY +CG ++ A+  FE ++E + VAWT I+ G +   
Sbjct: 206 QIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAE 265

Query: 287 QASEALDFFDMMISCNVKPNAITFIGLLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHY 466
           +  +AL  F  M++  V+ +   F  +L AC+    ++  ++ +    V  G+E+ V   
Sbjct: 266 RQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQ-IHGHIVKLGLESEVS-- 322

Query: 467 NCMVDVYCRAG 499
           + M+ +Y R G
Sbjct: 323 SAMITMYSRCG 333



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
 Frame = +2

Query: 158 DSALVTMYARCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNV 337
           +++++ MY +CG +  A+K F+ + E + V+W  II+  + +G   +    F  M+    
Sbjct: 122 ENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELET 181

Query: 338 KPNAITFIGLLNACSHTGLVSLAKE-YLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           KPN  T+IG L +  +   + + K+ +  ++  G G  A+V+    + ++Y + G
Sbjct: 182 KPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVN--TAISNMYVKCG 234


>ref|XP_006651199.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Oryza brachyantha]
          Length = 637

 Score =  135 bits (339), Expect = 7e-30
 Identities = 64/161 (39%), Positives = 96/161 (59%)
 Frame = +2

Query: 17  LRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYARCGD 196
           LR+  +  N F Y+ + +A           QVH    K     +   +SALV MY++CGD
Sbjct: 256 LRAGGVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSGYGDSCFAESALVRMYSKCGD 315

Query: 197 MQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIGLLNA 376
           M  A + FE  A+PD V+WTA+I+G + +GQ  EAL +FDM +   ++P+ +TF+G+L+A
Sbjct: 316 MGNAVRVFEATAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIRPDHVTFVGVLSA 375

Query: 377 CSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           C+H GLV    E   S+   YG+E T DHY C++D+  R+G
Sbjct: 376 CAHAGLVDKGLEIFHSIKEQYGIENTADHYACVIDLLSRSG 416



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
 Frame = +2

Query: 41  NSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGD----SALVTMYARCGDMQYA 208
           N F  SS   A           ++H   ++R + +   GD    SAL  MYA+CG +  A
Sbjct: 160 NEFTASSALAAATAARCARAGRELHCHVVRRGIDAG--GDAVLWSALADMYAKCGRVDDA 217

Query: 209 QKAFELIAEPDTVAWTAIITGCSYHGQASEALD-FFDMMISCNVKPNAITFIGLLNACSH 385
           ++ F+ +   D V+WTA++      G+  E    F  M+ +  V+PN  T+ G+L AC+ 
Sbjct: 218 RRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRAGGVRPNEFTYAGVLRACAE 277

Query: 386 TGLVSLAKEYLDSM-YVGYGVEATVDHYNCMVDVYCRAG 499
             + S  ++    M   GYG     +  + +V +Y + G
Sbjct: 278 FAVESFGRQVHGRMAKSGYGDSCFAE--SALVRMYSKCG 314


>gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
          Length = 703

 Score =  135 bits (339), Expect = 7e-30
 Identities = 64/161 (39%), Positives = 97/161 (60%)
 Frame = +2

Query: 17  LRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYARCGD 196
           LR+R +  N F Y+ + +A           QVH    K     +   +SAL+ MY++CGD
Sbjct: 260 LRTRGVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGD 319

Query: 197 MQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIGLLNA 376
           M  A + FE +A+PD V+WTA+I+G + +GQ  EAL +FDM +   +KP+ +TF+G+L+A
Sbjct: 320 MGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSA 379

Query: 377 CSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           C+H GLV    E   S+   Y +E T DHY C++D+  R+G
Sbjct: 380 CAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSG 420



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
 Frame = +2

Query: 41  NSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGD----SALVTMYARCGDMQYA 208
           N F  SS   A           ++H   ++R  I    GD    SAL  MYA+CG +  A
Sbjct: 163 NEFTASSALAAAAAARCGRAGRELHCHVVRRG-IDAAGGDAVLWSALADMYAKCGRVDDA 221

Query: 209 QKAFELIAEPDTVAWTAIITGCSYHGQASEALD-FFDMMISCNVKPNAITFIGLLNACSH 385
           ++ F+ +   D V+WTA++      G+  E    F  M+ +  V+PN  T+ G+L AC+ 
Sbjct: 222 RRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAE 281

Query: 386 TGLVSLAKE 412
             + S  ++
Sbjct: 282 FAVESFGRQ 290


>ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
           gi|108707037|gb|ABF94832.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa
           Japonica Group] gi|125585525|gb|EAZ26189.1| hypothetical
           protein OsJ_10058 [Oryza sativa Japonica Group]
           gi|215706461|dbj|BAG93317.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 641

 Score =  135 bits (339), Expect = 7e-30
 Identities = 64/161 (39%), Positives = 97/161 (60%)
 Frame = +2

Query: 17  LRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYARCGD 196
           LR+R +  N F Y+ + +A           QVH    K     +   +SAL+ MY++CGD
Sbjct: 260 LRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGD 319

Query: 197 MQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIGLLNA 376
           M  A + FE +A+PD V+WTA+I+G + +GQ  EAL +FDM +   +KP+ +TF+G+L+A
Sbjct: 320 MGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSA 379

Query: 377 CSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           C+H GLV    E   S+   Y +E T DHY C++D+  R+G
Sbjct: 380 CAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSG 420



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
 Frame = +2

Query: 41  NSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGD----SALVTMYARCGDMQYA 208
           N F  SS   A           ++H   ++R  I    GD    SAL  MYA+CG +  A
Sbjct: 163 NEFTASSALAAAAAARCGRAGRELHCHVVRRG-IDAAGGDAVLWSALADMYAKCGRVDDA 221

Query: 209 QKAFELIAEPDTVAWTAIITGCSYHGQASEALD-FFDMMISCNVKPNAITFIGLLNACSH 385
           ++ F+ +   D V+WTA++      G+  E    F  M+ +  V+PN  T+ G+L AC+ 
Sbjct: 222 RRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQ 281

Query: 386 TGLVSLAKE 412
             + S  ++
Sbjct: 282 FAVESFGRQ 290


>ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
           gi|449484855|ref|XP_004156999.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  134 bits (336), Expect = 2e-29
 Identities = 61/165 (36%), Positives = 99/165 (60%)
 Frame = +2

Query: 5   MFKFLRSRNITLNSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYA 184
           +F+ L + NI  N F ++ +  A           Q+HA  ++    S     SALV MY+
Sbjct: 339 LFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYS 398

Query: 185 RCGDMQYAQKAFELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIG 364
           +CGD++ A+  FE++ +PD  +WT+++ G + HGQ  +AL FF++++    KP+ I FIG
Sbjct: 399 KCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIG 458

Query: 365 LLNACSHTGLVSLAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           +L+AC+H GLV    EY  S+   +G+  T+DHY C++D+  RAG
Sbjct: 459 VLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAG 503



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 41/153 (26%), Positives = 73/153 (47%)
 Frame = +2

Query: 41  NSFIYSSLFQAXXXXXXXXXXXQVHADAIKRCLISNLVGDSALVTMYARCGDMQYAQKAF 220
           N    SS   A           ++H   ++  L S+ V   +L+ MY +CG ++ A+  F
Sbjct: 250 NKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIF 309

Query: 221 ELIAEPDTVAWTAIITGCSYHGQASEALDFFDMMISCNVKPNAITFIGLLNACSHTGLVS 400
           + + E D V+WT +I     +G+  E    F  +++ N+ PN  TF G+LNAC+      
Sbjct: 310 DKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAED 369

Query: 401 LAKEYLDSMYVGYGVEATVDHYNCMVDVYCRAG 499
           L K+ + +  V  G ++     + +V +Y + G
Sbjct: 370 LGKQ-IHAYMVRVGFDSFSSAASALVHMYSKCG 401