BLASTX nr result
ID: Zingiber23_contig00022992
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00022992
(5654 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 621 e-174
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 619 e-174
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 577 e-161
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 566 e-158
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 555 e-155
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 525 e-145
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 513 e-142
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 503 e-139
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 503 e-139
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 497 e-137
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 492 e-136
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 486 e-134
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 486 e-134
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 453 e-124
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 452 e-124
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 446 e-122
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 442 e-121
gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao] 433 e-118
gb|EOY14356.1| Uncharacterized protein TCM_033752 [Theobroma cacao] 428 e-116
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 419 e-114
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 621 bits (1602), Expect = e-174
Identities = 362/1098 (32%), Positives = 586/1098 (53%), Gaps = 21/1098 (1%)
Frame = +1
Query: 2278 MKIASWNIRGFHKALKHGGVQHLLKQKEIQVMASIETKLDDDALDIIMQRKFSGMGMANN 2457
M SWN+RG + K +++ L +I V A +ET++ + + + NN
Sbjct: 1 MLCVSWNVRGMNDPFKIKEIKNFLYSHKIVVCALLETRVREQNASKVQGKLGKDWKWLNN 60
Query: 2458 FNYSNRGRILLLWDMHRVSLDVLMATSQYMHCRVRCSITDRIFLATFVYGFHSIMARRPL 2637
+++S R RI + W V++ + Q M C ++ +A VYG H+I R+ L
Sbjct: 61 YSHSARERIWIGWRPAWVNVTLTHTQEQLMVCDIQDQSHKLKMVA--VYGLHTIADRKSL 118
Query: 2638 WNSLTLLGENIAEPWIIMGDYNSLLTVQDKEGGQPVSNYELHDLERFVHTCGLVDLRSIG 2817
W+ L + +P II+GD+N++ D+ G V++ E D ++F+ L++ RS
Sbjct: 119 WSGLLQCVQQ-QDPMIIIGDFNAVCHSNDRLYGTLVTDAETEDFQQFLLQSNLIESRSTW 177
Query: 2818 CRLTWTNGSVS-----SKLDRAMVNSQWLIADYESYVEFLPPGCLSDHSCGIVSTLAREK 2982
+W+N S+ S++D+A VN WL E V++LPPG +SDHS + + +
Sbjct: 178 SYYSWSNSSIGRDRVLSRIDKAYVNLVWLGMYAEVSVQYLPPG-ISDHSPLLFNLMTGRP 236
Query: 2983 RCNRPFKFYNMWTLHEGFQDLVASSWDEPISGNAQFALKAKLTRLKGKLRELDKLHFQHI 3162
+ +PFKF N+ F + V +W+ S N +F L+A LK REL ++ Q I
Sbjct: 237 QGGKPFKFMNVMAEQGEFLETVEKAWN---SVNGRFKLQAIWLNLKAVKRELKQMKTQKI 293
Query: 3163 SEQALRAKSVLEDAQRSLLSGAGPPNDYEVIRKRATL-----LAEAEKLFYQQRAKSVYL 3327
+ K++ Q ND ++ + + E QQ+++ +L
Sbjct: 294 GLAHEKVKNLRHQLQDLQSQDDFDHNDIMQTDAKSIMNDLRHWSHIEDSILQQKSRITWL 353
Query: 3328 KNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQDLLG-KTGQCT 3504
+ D +K F VK + N I L + G DEV EE + +++ LLG +
Sbjct: 354 QQGDTNSKLFFTAVKARHAINRIDMLNTEDGRVIQDADEVQEEILEFYKKLLGTRASTLM 413
Query: 3505 PLDSNTISGNHLSQAQ-REELVVPITNEEIKNALFDIGADKAPGPDGFNAKFYTAAWDKI 3681
+D NT+ G AQ +E L+ + + EI AL IG DKAPG DGFNA F+ +W I
Sbjct: 414 GVDLNTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKAPGLDGFNAYFFKKSWGSI 473
Query: 3682 GDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVISKVLSA 3861
+ A ++EFF++ ++ + N + L+PK H+ V ++RPI+CCTV YK+ISK+L+
Sbjct: 474 KQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYKIISKMLTN 533
Query: 3862 RLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKRISPRCMIKVDLKKAFDTVD 4041
R+ ++ +++ AQ F+ R I +NI LA EL+R Y RK +SPRC++KVD++KA+D+V+
Sbjct: 534 RMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVE 593
Query: 4042 WGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSGRRGLRQGDPLSPLLFG 4221
W FL + L +GFP +F GWI EC+STVSYSV +NG F R+GLRQGDP+SP LF
Sbjct: 594 WSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFA 653
Query: 4222 LCLEVFSRSMKEASRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDF 4401
LC+E SR ++E F++HP+C + +THL +ADDLL+F RAD SSL+ + F
Sbjct: 654 LCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKF 713
Query: 4402 GDKAGLRANPLKSNLYVAGMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGS 4581
+GL A+ KSN+Y G++++ EL Q G PFRYLG+PL +++L A
Sbjct: 714 SHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKP 773
Query: 4582 LLEAITKKVISWPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVW 4761
L+E IT + +W LS+AGR++LI+S+L ++ +W I P+ VI + + R F+W
Sbjct: 774 LVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLW 833
Query: 4762 S-----TKHPPISWSTICLPKEEGGYGLRDLQAWNMTLLCRTLWNIQSRRDSLWVKWIHQ 4926
+ TK P++W+TI PK GG+ + +++ WN + + LW I+ +RD LWV+WIH
Sbjct: 834 TGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHS 893
Query: 4927 HYLRSEDFWHWRGKPSDSPLIKCLLQIRDVLLQRTTSIGAAKMKLTEWFAEGENGTALAY 5106
+Y++ +D + +++ +++ RD L ++IG E + AY
Sbjct: 894 YYIKRQDILTVNISNQTTWILRKIVKARDHL----SNIG----DWDEICIGDKFSMKKAY 945
Query: 5107 DFFRPKKPKVPWFSVIWKSILMPKHRFTVWLLAHGKLRTADSLS---YEPSKMCALCQQH 5277
+V W +I + PK +F +W++ H +L T D +S + LC+
Sbjct: 946 KKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQCDLNYRLCRND 1005
Query: 5278 EESNGHIFFECAIAKSLLDRVVRWMDIKFDITSMAKLL-DVFQRHYKGKGRQVKARYLAV 5454
E+ H+FF C+ + + ++ M S +++ V + K KG+ + Y
Sbjct: 1006 GETIQHLFFSCSYSAGVWSKICYIMRFPNSGVSHQEIISSVCGQARKKKGKLIVMLY--- 1062
Query: 5455 SSMIYLIWEARNRSRFEG 5508
+ +Y IW+ RN+ F G
Sbjct: 1063 TEFVYAIWKQRNKRTFTG 1080
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 619 bits (1597), Expect = e-174
Identities = 366/1102 (33%), Positives = 581/1102 (52%), Gaps = 24/1102 (2%)
Frame = +1
Query: 2278 MKIASWNIRGFHKALKHGGVQHLLKQKEIQVMASIETKLDDDALDIIMQRKFSGMGMANN 2457
MKI +WN+RG + +K V+H L ++I + + ET++ I ++ + NN
Sbjct: 1 MKITTWNVRGLNDPIKVKEVKHFLHSQKISLCSLFETRVRQQNSGKIQKKFGNRWSWINN 60
Query: 2458 FNYSNRGRILLLWDMHRVSLDVLMATSQYMHCRVRCSITDRIFLATFVYGFHSIMARRPL 2637
+ S RGRI + W + V+++VL T Q + V+ S +F VYG H+I R+ L
Sbjct: 61 YACSPRGRIWVGWLNNDVNINVLSVTEQVITMEVKNSYGLNMFKMAAVYGLHTIADRKVL 120
Query: 2638 WNSLTLLGENIAEPWIIMGDYNSLLTVQDKEGGQPVSNYELHDLERFVHTCGLVDLRSIG 2817
W L EP I++GDYN++ + QD+ G VS E DL FV L++ + G
Sbjct: 121 WEELYNFVSVCHEPCILIGDYNAVYSAQDRLNGNDVSEAETSDLRSFVLKAQLLEAPTTG 180
Query: 2818 CRLTWTNGSV-----SSKLDRAMVNSQWLIADYESYVEFLPPGCLSDHSCGIVSTLAREK 2982
+W N S+ SS++D++ VN W+ + VE+ G +SDHS I + +
Sbjct: 181 LFYSWNNKSIGADRISSRIDKSFVNVAWINQYPDVVVEYREAG-ISDHSPLIFNLATQHD 239
Query: 2983 RCNRPFKFYNMWTLHEGFQDLVASSWDEPISGNAQFALKAKLTRLKGKLRELDKLHFQHI 3162
RPFKF N GF ++V +W S N +F +K RL+ R L H +
Sbjct: 240 EGGRPFKFLNFLADQNGFVEVVKEAWG---SANHRFKMKNIWVRLQAVKRALKSFHSKKF 296
Query: 3163 SEQALRAKSVLEDAQRSLLSGAGPPNDYEVIR---KRATLLAEAEKL------FYQQRAK 3315
S +A +E+ +R L + P +V + L+A+ K +Q+++
Sbjct: 297 S----KAHCQVEELRRKLAAVQALPEVSQVSELQEEEKDLIAQLRKWSTIDESILKQKSR 352
Query: 3316 SVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQDLLG-KT 3492
+L D +KFF +K RN I+ L GD+ T E+ E +++ LLG +
Sbjct: 353 IQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQNEICNFYRRLLGTSS 412
Query: 3493 GQCTPLDSNTIS-GNHLSQAQREELVVPITNEEIKNALFDIGADKAPGPDGFNAKFYTAA 3669
Q +D + + G LS +LV PIT +EI AL DI KAPG DGFN+ F+ +
Sbjct: 413 SQLEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKAPGLDGFNSVFFKKS 472
Query: 3670 WDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVISK 3849
W I + + +FF +G + K N T++ LIPK D + DYRPI+CC+ YK+ISK
Sbjct: 473 WLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLYKIISK 532
Query: 3850 VLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKRISPRCMIKVDLKKAF 4029
+L+ RL V++ ++D AQ F+ +R IG+NI LA EL+R Y R+ +SPRC+IKVD++KA+
Sbjct: 533 ILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAY 592
Query: 4030 DTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSGRRGLRQGDPLSP 4209
D+V+W FL S L GFP F WI C+ TVSYS+ LNG F ++GLRQGDPLSP
Sbjct: 593 DSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSP 652
Query: 4210 LLFGLCLEVFSRSMKEASRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGC 4389
LF L +E SR M + F++HP+C ++LTHL +ADDLL+FARAD SS++ IM
Sbjct: 653 FLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAA 712
Query: 4390 LTDFGDKAGLRANPLKSNLYVAGMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIA 4569
F +GL+A+ KS +Y G+ + +L G PFRYLG+PLA+++L +
Sbjct: 713 FNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFS 772
Query: 4570 NYGSLLEAITKKVISWPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISR 4749
L++ IT + W H LS+AGR++L++++L ++ +W I P+P +I + R
Sbjct: 773 QCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCR 832
Query: 4750 SFVW-----STKHPPISWSTICLPKEEGGYGLRDLQAWNMTLLCRTLWNIQSRRDSLWVK 4914
F+W ++ P++W + PK GG + ++ WN + + LW I ++D LWV+
Sbjct: 833 KFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVR 892
Query: 4915 WIHQHYLRSEDFWHWRGKPSDSPLIKCLLQIRDVLLQRTTSIGAAKMKLTEWFAEGENGT 5094
W++ +Y++ ++ + + S +++ + + R+ LL RT A + +
Sbjct: 893 WVNAYYIKRQNIENVTVSSNTSWILRKIFESRE-LLTRTGGWEAVSNHMNFSIKK----- 946
Query: 5095 ALAYDFFRPKKPKVPWFSVIWKSILMPKHRFTVWLLAHGKLRTADSLS---YEPSKMCAL 5265
Y + V W +I + PK +F +WL +L TA+ +S + S +C +
Sbjct: 947 --TYKLLQEDYENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLCKM 1004
Query: 5266 CQQHEESNGHIFFECAIAKSLLDRVVRWMDIKFDITSMAKLLDVFQRHYKGKGRQVKARY 5445
C E+ H+FF C +K + +V+ +++++ + AK ++ K R K
Sbjct: 1005 CGNEIETIQHLFFNCIYSKEIWGKVLLYLNLQPQADAQAKKELAIKKARSTKDRN-KLYV 1063
Query: 5446 LAVSSMIYLIWEARNRSRFEGI 5511
+ + +Y IW RN F GI
Sbjct: 1064 MMFTESVYAIWLLRNAKVFRGI 1085
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 577 bits (1486), Expect = e-161
Identities = 328/954 (34%), Positives = 506/954 (53%), Gaps = 21/954 (2%)
Frame = +1
Query: 2290 SWNIRGFHKALKHGGVQHLLKQKEIQVMASIETKLDDDALDIIMQRKFSGMGMANNFNYS 2469
SWN+RGF+ +++ + K + + +ET++ + + F G N+ ++
Sbjct: 6 SWNVRGFNNSVRRRNFRKWFKLSKALFGSILETRVKEHRARRSLLSSFPGWKSVCNYEFA 65
Query: 2470 NRGRILLLWDMHRVSLDVLMATSQYMHCRVRCSITDRIFLATFVYGFHSIMARRPLWNSL 2649
GRI ++WD V + VL + Q + C V+ F+ TFVY + RR LW+ L
Sbjct: 66 ALGRIWVVWDP-AVEVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRRLWSEL 124
Query: 2650 TLLGENIA---EPWIIMGDYNSLLTVQDKEGGQPVSNYELHDLERFVHTCGLVDLRSIGC 2820
LL N +PWII+GD+N L D G + + + T + DL G
Sbjct: 125 ELLAANQTTSDKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLPFRGN 184
Query: 2821 RLTWTNGS----VSSKLDRAMVNSQWLIADYESYVEFLPPGCLSDHSCGIVSTLAREKRC 2988
TW N ++ K+DR +VN WLIA SY F SDH V+ +
Sbjct: 185 HYTWWNNQENNPIAKKIDRILVNDSWLIASPLSYGSFCAME-FSDHCPSCVNISNQSGGR 243
Query: 2989 NRPFKFYNMWTLHEGFQDLVASSWDE-PISGNAQFALKAKLTRLKGKLRELDKLHFQHIS 3165
N+PFK N H F + + +WD G+A F L K LKG +R ++ H+ +
Sbjct: 244 NKPFKLSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYSGLE 303
Query: 3166 EQALRAKSVLEDAQRSLLSGAGPPNDYEVIRKRA----TLLAEAEKLFYQQRAKSVYLKN 3333
++ ++A L+ Q +LL A P + + K A LA AE+ F Q+++ ++LK
Sbjct: 304 KRVVQAAQNLKTCQNNLL--AAPSSYLAGLEKEAHRSWAELALAEERFLCQKSRVLWLKC 361
Query: 3334 SDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQDLLGKTGQCTPLD 3513
D T FFH ++ N I L Q+G + DE+ V +F++L G + +
Sbjct: 362 GDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVDFFKELFGSSSHLISAE 421
Query: 3514 S----NTISGNHLSQAQREELVVPITNEEIKNALFDIGADKAPGPDGFNAKFYTAAWDKI 3681
N+++ + R+ L ++ +IK+ F + ++K+PGPDG+ ++F+ W +
Sbjct: 422 GISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSIV 481
Query: 3682 GDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVISKVLSA 3861
G IAAV+EFF G+LL QWN T++ ++PK ++ +T++RPISCC YKVISK+L+
Sbjct: 482 GPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISCCNAIYKVISKLLAR 541
Query: 3862 RLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKRISPRCMIKVDLKKAFDTVD 4041
RL N++ + P+Q AFVK R + EN+ LA EL++ + + IS R ++KVDL+KAFD+V
Sbjct: 542 RLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVG 601
Query: 4042 WGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSGRRGLRQGDPLSPLLFG 4221
WGF++ L P +F WI +CI++ S+S++++G L G+F G +GLRQGDPLSP LF
Sbjct: 602 WGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFV 661
Query: 4222 LCLEVFSRSMKEASRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDF 4401
+ +E+ SR ++ YHP+ +EV ++ LA+ADDL++F SSL I L F
Sbjct: 662 IAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKASSLRGIKSVLESF 721
Query: 4402 GDKAGLRANPLKSNLYVAGMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGS 4581
+ +GL N KS +Y AG+E+ + + L GF G FPFRYLG+PL +LR ++Y
Sbjct: 722 KNLSGLEMNTEKSAVYTAGLEDTDKEDTLAF-GFVNGTFPFRYLGLPLLHRKLRRSDYSQ 780
Query: 4582 LLEAITKKVISWPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVW 4761
L++ I + W TLS AGR++LI SV+ FWLS +P + I + F+W
Sbjct: 781 LIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLW 840
Query: 4762 STK-----HPPISWSTICLPKEEGGYGLRDLQAWNMTLLCRTLWNIQSRRDSLWVKWIHQ 4926
+SW CLPK EGG GLR+ WN TL R +W + +RRDSLWV W H
Sbjct: 841 GNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHA 900
Query: 4927 HYLRSEDFWHWRGKPSDSPLIKCLLQIRDVLLQRTTSIGAAKMKLTEWFAEGEN 5088
+ LR +FW+ S + K +L +R + + L+ W+ N
Sbjct: 901 NRLRHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQLLSYWYDHWSN 954
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 566 bits (1458), Expect = e-158
Identities = 347/963 (36%), Positives = 508/963 (52%), Gaps = 27/963 (2%)
Frame = +1
Query: 2293 WNIRGFHKALKHGGVQHLLKQKEIQVMASIETKLDDDALDIIMQRKFSGMGMANNFNYSN 2472
WNIRGF+ G + +K + IET + + G N+ +S+
Sbjct: 8 WNIRGFNNVSHRSGFKKWVKANKPIFGGVIETHVKQPKDRKFINALLPGWSFVENYAFSD 67
Query: 2473 RGRILLLWDMHRVSLDVLMATSQYMHCRVRCSITDRIFLATFVYGFHSIMARRPLWNSLT 2652
G+I ++WD V + V+ + Q + C V + + + VY + + +R+ LW +
Sbjct: 68 LGKIWVMWDPS-VQVVVVAKSLQMITCEVLLPGSPSWIIVSVVYAANEVASRKELWIEIV 126
Query: 2653 ------LLGENIAEPWIIMGDYNSLLTVQDKEGGQPVS---NYELHDLERFVHTCGLVDL 2805
++G+ PW+++GD+N +L Q E PVS + + D + L DL
Sbjct: 127 NMVVSGIIGDR---PWLVLGDFNQVLNPQ--EHSNPVSLNVDINMRDFRDCLLAAELSDL 181
Query: 2806 RSIGCRLTWTNGS----VSSKLDRAMVNSQWLIADYESYVEFLPPGCLSDH-SCGIVSTL 2970
R G TW N S V+ K+DR +VN W A + S + SDH SCG+V
Sbjct: 182 RYKGNTFTWWNKSHTTPVAKKIDRILVNDSWN-ALFPSSLGIFGSLDFSDHVSCGVVLEE 240
Query: 2971 AREKRCNRPFKFYNMWTLHEGFQDLVASSWDE-PISGNAQFALKAKLTRLKGKLRELDKL 3147
K RPFKF+N + F +LV +W + G++ F + KL LK +++ +L
Sbjct: 241 TSIK-AKRPFKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALKKPIKDFSRL 299
Query: 3148 HFQHISEQALRAKSVLEDAQRSLLSGAGPPN-DYEVIRKRAT-LLAEAEKLFYQQRAKSV 3321
++ + ++ A L Q L+ P N +E+ +R +L AE+ F++Q+++
Sbjct: 300 NYSELEKRTKEAHDFLIGCQDRTLADPTPINASFELEAERKWHILTAAEESFFRQKSRIS 359
Query: 3322 YLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQDLLGKTGQC 3501
+ D TK+FH + N N+I L +G S + + + YF LLG +
Sbjct: 360 WFAEGDGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGILDLCASYFGSLLGD--EV 417
Query: 3502 TPL-----DSNTISGNHLSQAQREELVVPITNEEIKNALFDIGADKAPGPDGFNAKFYTA 3666
P D N + S AQ EL +NE+I+ ALF + +K+ GPDGF A+F+
Sbjct: 418 DPYLMEQNDMNLLLSYRCSPAQVCELESTFSNEDIRAALFSLPRNKSCGPDGFTAEFFID 477
Query: 3667 AWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVIS 3846
+W +G + A+KEFF G LLKQWN T+I LIPK + C +D+RPISC YKVI+
Sbjct: 478 SWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIA 537
Query: 3847 KVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKRISPRCMIKVDLKKA 4026
++L+ RL ++S ++ AQ AF+ RS+ EN+ LA +L+ Y ISPR M+KVDLKKA
Sbjct: 538 RLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKA 597
Query: 4027 FDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSGRRGLRQGDPLS 4206
FD+V W F+++AL P++F WI +CIST +++VS+NGG GFF +GLRQGDPLS
Sbjct: 598 FDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLS 657
Query: 4207 PLLFGLCLEVFSRSMKEASRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMG 4386
P LF L +E FS + HYHP+ + + ++HL +ADD+++F SL+ I
Sbjct: 658 PYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGICE 717
Query: 4387 CLTDFGDKAGLRANPLKSNLYVAGMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRI 4566
L DF +GL+ N KS+LY+AG+ QL GF G P RYLG+PL +LRI
Sbjct: 718 TLDDFASWSGLKVNKDKSHLYLAGL-NQLESNANAAYGFPIGTLPIRYLGLPLMNRKLRI 776
Query: 4567 ANYGSLLEAITKKVISWPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGIS 4746
A Y LLE IT + SW LS AGRI+LI SV+ G FW+S +P G I +I +
Sbjct: 777 AEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLC 836
Query: 4747 RSFVWS-----TKHPPISWSTICLPKEEGGYGLRDLQAWNMTLLCRTLWNIQSRRDSLWV 4911
F+WS K +SW+ +CLPK EGG GLR L WN TL R +W + +DSLW
Sbjct: 837 SRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWA 896
Query: 4912 KWIHQHYLRSEDFWHWRGKPSDSPLIKCLLQIRDVLLQRTTSIGAAKMKLTEWFAEGENG 5091
W H H+L FW G SDS K LL +R + Q +K W+ +N
Sbjct: 897 DWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKADYWY---DNW 953
Query: 5092 TAL 5100
T+L
Sbjct: 954 TSL 956
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 555 bits (1431), Expect = e-155
Identities = 322/939 (34%), Positives = 502/939 (53%), Gaps = 31/939 (3%)
Frame = +1
Query: 2293 WNIRGFHKALKHGGVQHLLKQKEIQVMASIETKLDDDALDIIMQRKFSGMGMANNFNYSN 2472
WN+RG +K+ KH ++ +++ Q +ET++ + + ++ + F + N+ ++
Sbjct: 6 WNVRGLNKSSKHSVIKKWIEENNFQFGCLVETRVKESKVSQLVGKLFKDWSILTNYEHNR 65
Query: 2473 RGRILLLWDMHRVSLDVLMATSQYMHCRVRCSITDRIFLATFVYGFHSIMARRPLWNSLT 2652
RGRI +LW + V L + + Q + C V+ F +FVY + + R+ LW+ L
Sbjct: 66 RGRIWVLWRKN-VRLSPIYKSCQLLTCSVKLEDRQDEFFCSFVYASNYVEERKVLWSELK 124
Query: 2653 LLGENIA---EPWIIMGDYNSLLTVQDKEGG--QPVSNYELHDLERFVHTCGLVDLRSIG 2817
++ +PW ++GD+N L + + P+ + D ++ ++ C L D+ + G
Sbjct: 125 DHYDSPIIRHKPWTLLGDFNETLDIAEHSQSFVHPMVTPGMRDFQQVINYCSLTDMAAQG 184
Query: 2818 CRLTWTN----GSVSSKLDRAMVNSQWLIADYESYVEFLPPGCLSDHSCGIV--STLARE 2979
TW N G + KLDR ++N W +SY F GC C I S +
Sbjct: 185 PLFTWCNKREHGLIMKKLDRVLINDCWNQTFSQSYSVFEAGGCSDHLRCRISLNSEAGNK 244
Query: 2980 KRCNRPFKFYNMWTLHEGFQDLVASSWDEP----ISGNAQFALKAKLTRLKGKLRELDKL 3147
+ +PFKF N T E F+ +V++ W + +S + F L LK K+R + +
Sbjct: 245 VQGLKPFKFVNALTDMEDFKPMVSTYWKDTEPLILSTSTLFRFSKNLKGLKPKIRSMARD 304
Query: 3148 HFQHISEQALRAKSVLEDAQRSLLSGAGPP--NDYEVIRKRATLLAEAEKLFYQQRAKSV 3321
++S++A A +L Q L+ + R +A E+ + +Q++K
Sbjct: 305 RLGNLSKKANEAYKILCAKQHVNLTNPSSMAMEEENAAYSRWDRVAILEEKYLKQKSKLH 364
Query: 3322 YLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQDLLGKTGQC 3501
+ + D+ TK FH N I ++ G T DE+ E +F++ L Q
Sbjct: 365 WCQVGDQNTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKAEAERFFREFL----QL 420
Query: 3502 TPLDSNTISGNHLSQ--------AQREELVVPITNEEIKNALFDIGADKAPGPDGFNAKF 3657
P D ++ L Q A ++ L+ P+T EEI+ LF + +DK+PGPDG+ ++F
Sbjct: 421 IPNDFEGVTITELQQLLPVRCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEF 480
Query: 3658 YTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYK 3837
+ A W+ IGD+F AV+ FF G L K N T +ALIPK + + DYRPISCC V YK
Sbjct: 481 FKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYK 540
Query: 3838 VISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKRISPRCMIKVDL 4017
VISK+++ RL V+ + Q AFVKDR + EN+ LA EL++ Y + IS RC IK+D+
Sbjct: 541 VISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDI 600
Query: 4018 KKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSGRRGLRQGD 4197
KAFD+V W FL++ GFP++F WI+ CI+T S+SV +NG L G+F RGLRQG
Sbjct: 601 SKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGC 660
Query: 4198 PLSPLLFGLCLEVFSRSMKEASRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSLNL 4377
LSP LF +C++V S+ + +A+ F YHP+C + LTHL++ADDL++ + + S+
Sbjct: 661 ALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIER 720
Query: 4378 IMGCLTDFGDKAGLRANPLKSNLYVAGMEEQLRGELLHITGFQQGVFPFRYLGIPLATER 4557
I+ +F +GLR + KS +Y+AG+ R E+ F G P RYLG+PL T+R
Sbjct: 721 IIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKR 780
Query: 4558 LRIANYGSLLEAITKKVISWPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIY 4737
L + LLE + K++ SW LS+AGR+ LI SVL + FWL+ +P I ++
Sbjct: 781 LSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELE 840
Query: 4738 GISRSFVWS-----TKHPPISWSTICLPKEEGGYGLRDLQAWNMTLLCRTLWNIQSRRDS 4902
+ +F+WS + ISW +C PK+EGG GLR L+ N + +W I S +S
Sbjct: 841 KMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNS 900
Query: 4903 LWVKWIHQHYLRSEDFWHWRGKPSDSPLI-KCLLQIRDV 5016
LWVKW+ QH LR+ FW + S I K LL+ R+V
Sbjct: 901 LWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREV 939
Score = 62.4 bits (150), Expect = 2e-06
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Frame = +1
Query: 5116 RPKKPKVPWFSVIWKSILMPKHRFTVWLLAHGKLRTADSLSYEPSKM---CALCQQHEES 5286
R +VPW VIW S PK+ F WL AHG+L T D + + + C CQ E+
Sbjct: 1048 RSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCIFCQGTLET 1107
Query: 5287 NGHIFFECAIAKSLLDRVVRWMDI-----KFDITS-MAKLLDVFQRHYKGKGRQVKARYL 5448
H+FF C+ V W+D+ K TS +++ + RY+
Sbjct: 1108 RDHLFFTCSFTS------VIWVDLARGIFKTQYTSHWQSIIEAITNSQHHRVEWFLRRYV 1161
Query: 5449 AVSSMIYLIWEARNRSR 5499
+ IY++W RN R
Sbjct: 1162 -FQATIYIVWRERNGRR 1177
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 525 bits (1351), Expect = e-145
Identities = 313/830 (37%), Positives = 450/830 (54%), Gaps = 22/830 (2%)
Frame = +1
Query: 2593 TFVYGFHSIMARRPLWNSLTLLGEN---IAEPWIIMGDYNSLLTVQDKEGGQPVS-NYEL 2760
+FVY + R+ LWN + + I +PW ++GD+N +L + + +
Sbjct: 4 SFVYASTDEVTRQILWNEIVDFSNDPCVIDKPWTVLGDFNQILHPSEHSTSDGFNVDRPT 63
Query: 2761 HDLERFVHTCGLVDLRSIGCRLTWTN----GSVSSKLDRAMVNSQWLIADYESYVEFLPP 2928
+ L DL G TW N V+ KLDR +VN +W S F P
Sbjct: 64 RIFRETILLASLTDLSFRGNTFTWWNKRSRAPVAKKLDRILVNDKWTTTFPSSLGLFGEP 123
Query: 2929 GCLSDHSCGIVSTLAREKRCNRPFKFYNMWTLHEGFQDLVASSW-DEPISGNAQFALKAK 3105
SDHS +S ++ R +PF+F N E F L+ W ++G+A + + K
Sbjct: 124 D-FSDHSSCELSLMSASPRSKKPFRFNNFLLKDENFLSLICLKWFSTSVTGSAMYRVSVK 182
Query: 3106 LTRLKGKLRELDKLHFQHISEQALRAKSVLEDAQRSLLSGAGPPN---DYEVIRKRATLL 3276
L LK +R+ + ++ I ++ A L AQ LL+ P N + E RK +L
Sbjct: 183 LKALKKVIRDFSRDNYSDIEKRTKEAHDALLLAQSVLLASPCPSNAAIEAETQRKWR-IL 241
Query: 3277 AEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEE 3456
AEAE F+ QR++ +L+ D + +FH + N I L+ GD +
Sbjct: 242 AEAEASFFYQRSRVNWLREGDMNSSYFHKMASARQSLNHIHFLSDPVGDRIEGQQNLENH 301
Query: 3457 FVGYFQDLLGKTGQCTPL----DSNTISGNHLSQAQREELVVPITNEEIKNALFDIGADK 3624
V YFQ LG Q PL D + + S AQ+ L P ++E+IKNA F + +K
Sbjct: 302 CVEYFQSNLGSE-QGLPLFEQADISNLLSYRCSPAQQVSLDTPFSSEQIKNAFFSLPRNK 360
Query: 3625 APGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDY 3804
A GPDGF+ +F+ A W IG + A+ EFF GKLLKQWN T++ LIPK ++ ++D+
Sbjct: 361 ASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDF 420
Query: 3805 RPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKR 3984
RPISC YKVISK+L+ RL + + + + +Q AF+ R EN+ LA EL+ Y +K
Sbjct: 421 RPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKN 480
Query: 3985 ISPRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGF 4164
I+P M+KVDL+KAFD+V W F++SAL P++F WI EC+ST S+SV LNG G
Sbjct: 481 IAPSSMLKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVILNGHSAGH 540
Query: 4165 FSGRRGLRQGDPLSPLLFGLCLEVFSRSMKEASRLDGFHYHPRCAEVELTHLAYADDLLL 4344
F +GLRQGDP+SP LF L +EVFS ++ YHP+ +++E++HL +ADD+++
Sbjct: 541 FWSSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMI 600
Query: 4345 FARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVAGMEEQLRGELLHITGFQQGVFPF 4524
F SSL+ I+ L DF +GL N K+ LY AG+ Q + + GF+ G P
Sbjct: 601 FFDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGL-SQSESDSMASYGFKLGSLPV 659
Query: 4525 RYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLSHAGRIELIRSVLQGVECFWLSIL 4704
RYLG+PL + +L IA Y L+E IT + SW LS AGR++L+ SV+ G+ FW+S
Sbjct: 660 RYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISGIVNFWISSF 719
Query: 4705 PIPSGVIDKIYGISRSFVWSTK-----HPPISWSTICLPKEEGGYGLRDLQAWNMTLLCR 4869
+P G I KI + F+WS++ ++WS +CLPK EGG GLR N TL R
Sbjct: 720 ILPLGCIKKIESLCSRFLWSSRIDKKGIAKVAWSQVCLPKAEGGIGLRRFAVSNRTLYLR 779
Query: 4870 TLWNIQSRRDSLWVKWIHQHYL-RSEDFWHWRGKPSDSPLIKCLLQIRDV 5016
+W + S SLWV W QH L +S FW+ KP DS KCLL++R V
Sbjct: 780 MIWLLFSNSGSLWVAWHKQHSLGKSTSFWNQPEKPHDSWNWKCLLRLRVV 829
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 513 bits (1321), Expect = e-142
Identities = 346/1109 (31%), Positives = 527/1109 (47%), Gaps = 45/1109 (4%)
Frame = +1
Query: 2380 IETKLDDDALDIIMQRKFSGMGMANNFNYSNRGRILLLWDMHRVSLDVLMATSQYMHCRV 2559
+ET++ + + +I + F M +N+ ++ GRI ++W V L V+ +SQ + C V
Sbjct: 337 LETRVIESKVPVIFAKVFKDWQMVSNYEFNRLGRIWVVWSSS-VQLQVIFKSSQMIVCLV 395
Query: 2560 RCSITDRIFLATFVYGFHSIMARRPLWNSLTLLGENIA---EPWIIMGDYNSLLTVQDKE 2730
R D F+ +F+Y + + R+ LW L L ++A +PW++ GD+N L +++
Sbjct: 396 RVEHYDVEFICSFIYASNFVEERKKLWQDLHNLQNSVAFRNKPWLLFGDFNETLKMEEHS 455
Query: 2731 GG--QPVSNYELHDLERFVHTCGLVDLRSIGCRLTWTN----GSVSSKLDRAMVNSQWLI 2892
P+ + D + V C L D+R+ G TW N G + KLDR ++N ++
Sbjct: 456 SYAVSPMVTPGMRDFQIVVRYCSLEDMRTHGPLFTWGNKRNEGLICKKLDRVLLNPEYNS 515
Query: 2893 ADYESYVEFLPPGCLSDHSCGIVSTLAREKRCNRPFKFYNMWTLHEGFQDLVASSWDEPI 3072
A SY GC SDH G + ++ PFKF N+ H F V W
Sbjct: 516 AYPHSYCIMDSGGC-SDHLRGRFHLRSAIQKPKGPFKFTNVIAAHPEFMPKVEDFWKNTT 574
Query: 3073 ----SGNAQFALKAKLTRLKGKLRELDKLHFQHISEQALRAKSVLEDAQRSLLSGAGPPN 3240
S + F KL LK L++L + ++S+ RA E+ R N
Sbjct: 575 ELFPSTSTLFRFSKKLKELKPILKDLSR---NNLSDLTRRATYAYEELCRCQTKSLTTLN 631
Query: 3241 DYEVIRKRATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSG 3420
++++ E L +++ K +L N AI ++ G
Sbjct: 632 PHDIVD---------ESLAFERWEKERHLLN-------------------AIHEVMDPQG 663
Query: 3421 DETTSLDEVAEEFVGYFQDLLGKTGQCTPLDSNTISGNHL--------SQAQREELVVPI 3576
+ D++ E V +F DLL P D IS + L S ++ LV I
Sbjct: 664 TRPPNQDDIKIEAVRFFSDLLSSQ----PSDFTGISVDELKGILQYRYSLHEQNLLVAEI 719
Query: 3577 TNEEIKNALFDIGADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTS 3756
T E+ F I +K+PGPDG+ +F+ W IG + A+K FF +G L K N T
Sbjct: 720 TEAEVMKVFFSIPLNKSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNSTI 779
Query: 3757 IALIPKSDHSPCVTDYRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGE 3936
+ALIPK ++ + DYRPISCC V YK ISK+L+ RL ++ + P Q AF+ DR + E
Sbjct: 780 LALIPKRTYAKEMKDYRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLME 839
Query: 3937 NIHLAQELLRKYARKRISPRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECI 4116
N+ LA EL++ Y + +SPRC +K+DL KAFD+V W FL++ L P++F WI+ CI
Sbjct: 840 NLLLASELVKDYHKDGLSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLCI 899
Query: 4117 STVSYSVSLNGGLYGFFSGRRGLRQGDPLSPLLFGLCLEVFSRSMKEASRLDGFHYHPRC 4296
ST S+SV +N GLRQG LSP LF +C+ V S + + + F YHPRC
Sbjct: 900 STASFSVQVN-----------GLRQGCSLSPYLFVICMNVLSAMLDKGAVEKRFGYHPRC 948
Query: 4297 AEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVAGMEEQLR 4476
+ LTHL +ADD+++F+ SL ++ DF +GL + KS L++A + +
Sbjct: 949 RNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMASISSETC 1008
Query: 4477 GELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLSHAGRIEL 4656
+L F G P RYLG+PL T+R+ +A+ LLE I ++ SW LS+AGR++L
Sbjct: 1009 ASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQL 1068
Query: 4657 IRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS-----TKHPPISWSTICLPKEEGG 4821
+ SV+ + FW+S +P I +I IS +F+WS ++W +C PK EGG
Sbjct: 1069 LNSVISSLTKFWISAFRLPRACIREIEQISAAFLWSGTDLNPHKAKVAWHDVCKPKSEGG 1128
Query: 4822 YGLRDLQAWNMTLLCRTLWNIQSRRDSLWVKWIHQHYLR--SEDFWHWRGKPSDSPLIKC 4995
GLR L N + +W + S + SLWV WI + +R +E R + ++
Sbjct: 1129 LGLRSLVDANKICCFKLIWRLVSAKHSLWVNWIQNNLIRTVAEALSSHRRRSHRDDILND 1188
Query: 4996 LLQIRDVLLQR----------TTSIGA---AKMKLTE-WFAEGENGTALAYDFFRPKKPK 5133
+ + + LL R SIG AK E W E G
Sbjct: 1189 IEEELEKLLCRGICTEQDRSLCRSIGGQFKAKFFSPEIWHQIREQGLV------------ 1236
Query: 5134 VPWFSVIWKSILMPKHRFTVWLLAHGKLRTAD---SLSYEPSKMCALCQQHEESNGHIFF 5304
W IW S PK F WL AH +L T D S + S +C LC ES H+FF
Sbjct: 1237 KQWHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCVLCNISAESRDHLFF 1296
Query: 5305 ECAIAKSLLDRVVRWMDIKFDITSMAKLLDVFQRHYKGKGRQVKARYLAVSSMIYLIWEA 5484
C + + DR+ R + + T+ LL + ++ RY+ + I+ +W
Sbjct: 1297 SCNFSSHIWDRLTRRLLLCRYTTNFPALLLLLSGQDFSGTKRFLLRYV-FQATIHTLWRE 1355
Query: 5485 RNRSRFEGIVPCVERMFHKVQIHVWRFVD 5571
RN+ R G +P H+ +F+D
Sbjct: 1356 RNKRR-HGDLPIPSD-------HIIKFID 1376
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 503 bits (1295), Expect = e-139
Identities = 294/797 (36%), Positives = 436/797 (54%), Gaps = 22/797 (2%)
Frame = +1
Query: 2686 IMGDYNSLLTVQDKEGGQPVS-NYELHDLERFVHTCGLVDLRSIGCRLTWTNGS----VS 2850
++GD+N +L Q+ ++ + + D + L DL G TW N S ++
Sbjct: 1 MLGDFNQVLLPQEHSNPPSLNIDRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRPIA 60
Query: 2851 SKLDRAMVNSQWLIADYESYVEFLPPGCL--SDH-SCGIVSTLAREKRCNRPFKFYNMWT 3021
KLDR + N W S+ F G L SDH SCG+V A RPFKF+N
Sbjct: 61 KKLDRILANDSWCNLYPSSHGLF---GNLDFSDHVSCGVVLE-ANGISAKRPFKFFNFLL 116
Query: 3022 LHEGFQDLVASSW-DEPISGNAQFALKAKLTRLKGKLRELDKLHFQHISEQALRAKSVLE 3198
+E F ++V +W + G++ + + KL +K +++ +L++ I + A +L
Sbjct: 117 KNEDFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLI 176
Query: 3199 DAQRSLLSGAGPPN---DYEVIRKRATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLV 3369
Q L+ N + E RK LL+ AE+ F+ QR++ + D T +FH +V
Sbjct: 177 TCQNLTLANPSVSNAALELEAQRKWV-LLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMV 235
Query: 3370 KRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQDLLGKTGQCTPL---DSNTISGNHL 3540
N I L +G S + + V Y++ LLG + D N +
Sbjct: 236 DSRKSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRC 295
Query: 3541 SQAQREELVVPITNEEIKNALFDIGADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFH 3720
SQ Q EL T++EIK A + +K GPDG++ +F+ W IG + +AA+ EFF
Sbjct: 296 SQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFD 355
Query: 3721 HGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVISKVLSARLANVMSSLLDPA 3900
G+LLKQWN T++ LIPK+ ++ ++++RPISC YKVISK+L++RL ++S+++ +
Sbjct: 356 SGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHS 415
Query: 3901 QVAFVKDRSIGENIHLAQELLRKYARKRISPRCMIKVDLKKAFDTVDWGFLMSALVGYGF 4080
Q AF+ RS+ EN+ LA E++ Y R ISPR M+KVDLKKAFD+V W F+ +AL
Sbjct: 416 QSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAI 475
Query: 4081 PQQFCGWIHECISTVSYSVSLNGGLYGFFSGRRGLRQGDPLSPLLFGLCLEVFSRSMKEA 4260
P+++ WIH+CI+T S+++S+NG GFF +GLRQGDPLSP LF L +EVFS+ +
Sbjct: 476 PERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSR 535
Query: 4261 SRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKS 4440
HYHP+ ++ ++HL +ADD+++F SS++ I L DF D +GL+ N KS
Sbjct: 536 YDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKS 595
Query: 4441 NLYVAGME--EQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVIS 4614
L+ AG++ E++ GF G FP RYLG+PL +LRIA+YG LLE ++ ++ S
Sbjct: 596 QLFQAGLDLSERITSAAY---GFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRS 652
Query: 4615 WPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS-----TKHPP 4779
W LS AGR +LI SV+ G+ FW+S +P G I KI + F+W+ K
Sbjct: 653 WVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSK 712
Query: 4780 ISWSTICLPKEEGGYGLRDLQAWNMTLLCRTLWNIQSRRDSLWVKWIHQHYLRSEDFWHW 4959
+SW CLPK EGG G R WN TLL R +W + R SLW +W H L FW
Sbjct: 713 VSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQV 772
Query: 4960 RGKPSDSPLIKCLLQIR 5010
+D K LL +R
Sbjct: 773 NALQTDPWTWKMLLNLR 789
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 503 bits (1295), Expect = e-139
Identities = 294/797 (36%), Positives = 436/797 (54%), Gaps = 22/797 (2%)
Frame = +1
Query: 2686 IMGDYNSLLTVQDKEGGQPVS-NYELHDLERFVHTCGLVDLRSIGCRLTWTNGS----VS 2850
++GD+N +L Q+ ++ + + D + L DL G TW N S ++
Sbjct: 1 MLGDFNQVLLPQEHSNPPSLNIDRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRPIA 60
Query: 2851 SKLDRAMVNSQWLIADYESYVEFLPPGCL--SDH-SCGIVSTLAREKRCNRPFKFYNMWT 3021
KLDR + N W S+ F G L SDH SCG+V A RPFKF+N
Sbjct: 61 KKLDRILANDSWCNLYPSSHGLF---GNLDFSDHVSCGVVLE-ANGISAKRPFKFFNFLL 116
Query: 3022 LHEGFQDLVASSW-DEPISGNAQFALKAKLTRLKGKLRELDKLHFQHISEQALRAKSVLE 3198
+E F ++V +W + G++ + + KL +K +++ +L++ I + A +L
Sbjct: 117 KNEDFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLI 176
Query: 3199 DAQRSLLSGAGPPN---DYEVIRKRATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLV 3369
Q L+ N + E RK LL+ AE+ F+ QR++ + D T +FH +V
Sbjct: 177 TCQNLTLANPSVSNAALELEAQRKWV-LLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMV 235
Query: 3370 KRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQDLLGKTGQCTPL---DSNTISGNHL 3540
N I L +G S + + V Y++ LLG + D N +
Sbjct: 236 DSRKSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRC 295
Query: 3541 SQAQREELVVPITNEEIKNALFDIGADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFH 3720
SQ Q EL T++EIK A + +K GPDG++ +F+ W IG + +AA+ EFF
Sbjct: 296 SQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFD 355
Query: 3721 HGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVISKVLSARLANVMSSLLDPA 3900
G+LLKQWN T++ LIPK+ ++ ++++RPISC YKVISK+L++RL ++S+++ +
Sbjct: 356 SGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHS 415
Query: 3901 QVAFVKDRSIGENIHLAQELLRKYARKRISPRCMIKVDLKKAFDTVDWGFLMSALVGYGF 4080
Q AF+ RS+ EN+ LA E++ Y R ISPR M+KVDLKKAFD+V W F+ +AL
Sbjct: 416 QSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAI 475
Query: 4081 PQQFCGWIHECISTVSYSVSLNGGLYGFFSGRRGLRQGDPLSPLLFGLCLEVFSRSMKEA 4260
P+++ WIH+CI+T S+++S+NG GFF +GLRQGDPLSP LF L +EVFS+ +
Sbjct: 476 PERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSR 535
Query: 4261 SRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKS 4440
HYHP+ ++ ++HL +ADD+++F SS++ I L DF D +GL+ N KS
Sbjct: 536 YDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKS 595
Query: 4441 NLYVAGME--EQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVIS 4614
L+ AG++ E++ GF G FP RYLG+PL +LRIA+YG LLE ++ ++ S
Sbjct: 596 QLFQAGLDLSERITSAAY---GFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRS 652
Query: 4615 WPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS-----TKHPP 4779
W LS AGR +LI SV+ G+ FW+S +P G I KI + F+W+ K
Sbjct: 653 WVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSK 712
Query: 4780 ISWSTICLPKEEGGYGLRDLQAWNMTLLCRTLWNIQSRRDSLWVKWIHQHYLRSEDFWHW 4959
+SW CLPK EGG G R WN TLL R +W + R SLW +W H L FW
Sbjct: 713 VSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQV 772
Query: 4960 RGKPSDSPLIKCLLQIR 5010
+D K LL +R
Sbjct: 773 NALQTDPWTWKMLLNLR 789
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 497 bits (1279), Expect = e-137
Identities = 293/915 (32%), Positives = 472/915 (51%), Gaps = 24/915 (2%)
Frame = +1
Query: 2278 MKIASWNIRGFHKALKHGGVQHLLKQKEIQVMASIETKLDDDALDIIMQRKFSGMGMANN 2457
MK+ WNIRG + + V+ + + V +ET + + + ++ G M +N
Sbjct: 1 MKVFCWNIRGLNSRNRQRVVRSWIASNNLLVGCFLETHVAQENANSVLASTLPGWRMDSN 60
Query: 2458 FNYSNRGRILLLWDMHRVSLDVLMATSQYMHCRVRCSITDRIFLATFVYGFHSIMARRPL 2637
+ S GRI ++WD +S+ V T Q M C ++ + F FVYG +S + RR L
Sbjct: 61 YCCSELGRIWIVWDPS-ISVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSL 119
Query: 2638 WNSLTLLGENI---AEPWIIMGDYNSLLTVQDKEG-GQPVSNYE-LHDLERFVHTCGLVD 2802
W + +L PW+++GD+N + + Q + N + DL+ + L D
Sbjct: 120 WEDILVLSRTSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSD 179
Query: 2803 LRSIGCRLTWTN----GSVSSKLDRAMVNSQWLIADYESYVEFLPPGCLSDHSCGIVSTL 2970
L S G TW+N + KLDRA+ N +W + F PPG SDH+ I+
Sbjct: 180 LPSRGVFFTWSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPGD-SDHAPCIILID 238
Query: 2971 AREKRCNRPFKFYNMWTLHEGFQDLVASSWD-EPISGNAQFALKAKLTRLKGKLRELDKL 3147
+ + FK+++ + H + ++++W+ + G+ F+L+ L K R L++L
Sbjct: 239 NQPPPSKKSFKYFSFLSSHPSYLAALSTAWEANTLVGSHMFSLRQHLKVAKLCCRTLNRL 298
Query: 3148 HFQHISEQALRAKSVLEDAQRSLLSGAGPPNDY-----EVIRKRATLLAEAEKLFYQQRA 3312
F +I ++ ++ + LED Q LL+ P+D V RK+ A A + F++Q++
Sbjct: 299 RFSNIQQRTAQSLTRLEDIQVELLTS---PSDTLFRREHVARKQWIFFAAALESFFRQKS 355
Query: 3313 KSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQDLLGKT 3492
+ +L D T+FFH V + N I L G ++D++ + Y+ LLG
Sbjct: 356 RIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYSHLLGIP 415
Query: 3493 GQ-CTPLDSNTISGN---HLSQAQREELVVPITNEEIKNALFDIGADKAPGPDGFNAKFY 3660
+ TP I G +L + EEI LF + +KAPGPDGF +F+
Sbjct: 416 SENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAPGPDGFPVEFF 475
Query: 3661 TAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKV 3840
AW + +AA++EFF G L + +N T+I LIPK + +T +RP++CCT YKV
Sbjct: 476 IEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPVACCTTIYKV 535
Query: 3841 ISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKRISPRCMIKVDLK 4020
I++++S RL + + QV F+K R + EN+ LA EL+ + + R ++VD+
Sbjct: 536 ITRIISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELVDNFEADGETTRGCLQVDIS 595
Query: 4021 KAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSGRRGLRQGDP 4200
KA+D V+W FL++ L P F WI CIS+ SYS++ NG L GFF G++G+RQGDP
Sbjct: 596 KAYDNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQGKKGIRQGDP 655
Query: 4201 LSPLLFGLCLEVFSRSMKEASRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSLNLI 4380
+S LF L ++V S+S+ + F+ HP C +THL++ADD+L+F+ SS+ I
Sbjct: 656 MSSHLFVLVMDVLSKSLDLGALNGLFNLHPNCLAPIITHLSFADDVLVFSDGAASSIAGI 715
Query: 4381 MGCLTDFGDKAGLRANPLKSNLYVAGMEEQLRGELLHITGFQQGVFPFRYLGIPLATERL 4560
+ L DF +GL N K+ L + G L G G P RYLG+PL ++++
Sbjct: 716 LTILDDFRQGSGLGINREKTELLLDGGNFARNRSLADNLGITHGSLPVRYLGVPLMSQKM 775
Query: 4561 RIANYGSLLEAITKKVISWPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYG 4740
R +Y L++ I + SW LS AGR++L++SV+ FW S+ P+ + K+
Sbjct: 776 RRQDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASVFIFPNQCLQKLEQ 835
Query: 4741 ISRSFVW-----STKHPPISWSTICLPKEEGGYGLRDLQAWNMTLLCRTLWNIQSRRDSL 4905
+ +F+W S + ISW+ +C PKE GG GL+ L +WN L + +W + + SL
Sbjct: 836 MCNAFLWSGAPNSARGAKISWNIVCSPKEAGGLGLKRLSSWNRILALKLIWLLFTSAGSL 895
Query: 4906 WVKWIHQHYLRSEDF 4950
WV W+ H + +F
Sbjct: 896 WVSWVRLHLIGRRNF 910
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 893
Score = 492 bits (1266), Expect = e-136
Identities = 303/904 (33%), Positives = 465/904 (51%), Gaps = 28/904 (3%)
Frame = +1
Query: 2281 KIASWNIRGFHKALKHGGVQHLLKQKEIQVMASIETKLDDDALDIIMQRKFSGMGMANNF 2460
K+ WN+RGF+ + G + + IET + + G N+
Sbjct: 4 KLFCWNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFVENY 63
Query: 2461 NYSNRGRILLLWDMHRVSLDVLMATSQYMHCRVRCSITDRIFLATFVYGFHSIMARRPLW 2640
+S G+I +LWD V + V+ + Q + C + + F+ + VY + R+ LW
Sbjct: 64 EFSVLGKIWVLWDPS-VKVVVIGRSLQMITCELLLPDSPSWFVVSIVYASNEEGTRKELW 122
Query: 2641 NSLTLLGEN---IAEPWIIMGDYNSLLTVQDKEGGQPVSNYELHDLERFVHTC----GLV 2799
N L L + + WI++GD+N +L + N + R +C L
Sbjct: 123 NELVQLALSPVVVGRSWIVLGDFNQILNPES------AINANIGRKIRAFRSCLLDSDLY 176
Query: 2800 DLRSIGCRLTWTNGSVS----SKLDRAMVNSQWLIADYESYVEFLPPGCLSDHSCGIVST 2967
DL G TW N S K+DR +VN W +Y F P SC +V
Sbjct: 177 DLVYKGSSYTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSSCEVVLD 236
Query: 2968 LAREKRCNRPFKFYNMWTLHEGFQDLVASSWDE-PISGNAQFALKAKLTRLKGKLRELDK 3144
A K RPF+F+N + + F L+ +W +SG+A + + KL LK + +
Sbjct: 237 PAVLK-AKRPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKLPICCFSR 295
Query: 3145 LHFQHISEQALRAKSVLEDAQRSLLSGAGPPNDYEVIRKRAT----LLAEAEKLFYQQRA 3312
++ I ++ A +++ QR L+ P + + AT +LA+AE+ F+ Q++
Sbjct: 296 ENYSDIEKRVSEAHAIVLHRQRITLTN--PSVVHATLELEATRKWQILAKAEESFFCQKS 353
Query: 3313 KSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSL----DEVAEEFVGYFQDL 3480
+L D T +FH + N I L G+ + + + E +F+ L
Sbjct: 354 SISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIKEGIKEHSCNFFESL 413
Query: 3481 L-GKTGQ--CTPLDSNTISGNHLSQAQREELVVPITNEEIKNALFDIGADKAPGPDGFNA 3651
L G G+ D N + S Q +L ++ +I+ A F + +KA GPDG+++
Sbjct: 414 LCGVEGENSLAQSDMNLLLSFRCSVDQINDLERSFSDLDIQEAFFSLPRNKASGPDGYSS 473
Query: 3652 KFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVF 3831
+F+ W +G + AV+EFF G+LLKQWN T++ LIPK +S +TD+RPISC
Sbjct: 474 EFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTL 533
Query: 3832 YKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKRISPRCMIKV 4011
YKVI+K+L++RL +++ ++ P+Q AF+ R + EN+ LA E++ Y K IS R M+KV
Sbjct: 534 YKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKV 593
Query: 4012 DLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSGRRGLRQ 4191
DL+KAFD+V W F++SA P++F WI++CIST +SV +NG GFF +GLRQ
Sbjct: 594 DLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQ 653
Query: 4192 GDPLSPLLFGLCLEVFSRSMKEASRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSL 4371
GDPLSP LF L +EVFS +K HYHP+ A++ ++HL +ADD+++F SSL
Sbjct: 654 GDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSSSL 713
Query: 4372 NLIMGCLTDFGDKAGLRANPLKSNLYVAGMEEQLRGELLHITGFQQGVFPFRYLGIPLAT 4551
+ I L DF +GL N K+NLY+AG +E + H GF P RYLG+PL +
Sbjct: 714 HGISEALDDFASWSGLHVNKDKTNLYLAGTDEVEALAISHY-GFPISTLPIRYLGLPLMS 772
Query: 4552 ERLRIANYGSLLEAITKKVISWPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDK 4731
+L+I+ Y + K+ SW +LS AGR++LI SV+ G+ FW+S + G + K
Sbjct: 773 RKLKISEY-----ELVKRFRSWAVKSLSFAGRVQLITSVITGLVNFWMSTFVLLLGCVKK 827
Query: 4732 IYGISRSFVWS-----TKHPPISWSTICLPKEEGGYGLRDLQAWNMTLLCRTLWNIQSRR 4896
I + F+WS +K I+WS +CLPK EGG GLR WN T R +W + +
Sbjct: 828 IESLCSRFLWSGSIDASKGAKIAWSGVCLPKNEGGVGLRRFTPWNKTFYLRFIWPLFADN 887
Query: 4897 DSLW 4908
D LW
Sbjct: 888 DVLW 891
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 486 bits (1252), Expect = e-134
Identities = 301/904 (33%), Positives = 463/904 (51%), Gaps = 28/904 (3%)
Frame = +1
Query: 2281 KIASWNIRGFHKALKHGGVQHLLKQKEIQVMASIETKLDDDALDIIMQRKFSGMGMANNF 2460
K+ WN+RGF+ + G + + IET + + G N+
Sbjct: 4 KLFCWNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFVENY 63
Query: 2461 NYSNRGRILLLWDMHRVSLDVLMATSQYMHCRVRCSITDRIFLATFVYGFHSIMARRPLW 2640
+S G+I +LWD V + V+ + Q + C + + F+ + VY + R+ LW
Sbjct: 64 EFSVLGKIWVLWDPS-VKVVVIGRSLQMITCELLLPDSPSWFVVSIVYASNEEGTRKELW 122
Query: 2641 NSLTLLGEN---IAEPWIIMGDYNSLLTVQDKEGGQPVSNYELHDLERFVHTC----GLV 2799
N L L + + WI++GD+N +L + N + R +C L
Sbjct: 123 NELVQLALSPVVVGRSWIVLGDFNQILNPES------AINANIGRKIRAFRSCLLDSDLY 176
Query: 2800 DLRSIGCRLTWTNGSVS----SKLDRAMVNSQWLIADYESYVEFLPPGCLSDHSCGIVST 2967
DL G TW N S K+DR +VN W +Y F P SC +V
Sbjct: 177 DLVYKGSSYTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSSCEVVLD 236
Query: 2968 LAREKRCNRPFKFYNMWTLHEGFQDLVASSWDE-PISGNAQFALKAKLTRLKGKLRELDK 3144
A K RPF+F+N + + F L+ +W +SG+A + + KL LK + +
Sbjct: 237 PAVLK-AKRPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKLPICCFSR 295
Query: 3145 LHFQHISEQALRAKSVLEDAQRSLLSGAGPPNDYEVIRKRAT----LLAEAEKLFYQQRA 3312
++ I ++ A +++ QR L+ P + + AT +LA+AE+ F+ Q++
Sbjct: 296 ENYSDIEKRVSEAHAIVLHRQRITLTN--PSVVHATLELEATRKWQILAKAEESFFCQKS 353
Query: 3313 KSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSL----DEVAEEFVGYFQDL 3480
+L D T +FH + N I L G+ + + + E +F+ L
Sbjct: 354 SISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIKEGIKEHSCNFFESL 413
Query: 3481 L-GKTGQ--CTPLDSNTISGNHLSQAQREELVVPITNEEIKNALFDIGADKAPGPDGFNA 3651
L G G+ D N + S Q +L ++ +I+ A F + +KA GPDG+++
Sbjct: 414 LCGVEGENSLAQSDMNLLLSFRCSVDQINDLERSFSDLDIQEAFFSLPRNKASGPDGYSS 473
Query: 3652 KFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVF 3831
+F+ W +G + AV+EFF G+LLKQWN T++ LIPK +S +TD+RPISC
Sbjct: 474 EFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTL 533
Query: 3832 YKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKRISPRCMIKV 4011
YKVI+K+L++RL +++ ++ P+Q AF+ R + EN+ LA E++ Y K IS R M+KV
Sbjct: 534 YKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKV 593
Query: 4012 DLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSGRRGLRQ 4191
DL+KAFD+V W F++SA P++F WI++CIST +SV +NG GFF +GLRQ
Sbjct: 594 DLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQ 653
Query: 4192 GDPLSPLLFGLCLEVFSRSMKEASRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSL 4371
GDPLSP LF L +EVFS +K YHP+ A++ ++HL +ADD+++F SSL
Sbjct: 654 GDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSSL 713
Query: 4372 NLIMGCLTDFGDKAGLRANPLKSNLYVAGMEEQLRGELLHITGFQQGVFPFRYLGIPLAT 4551
+ I L DF +GL N K+NLY+AG +E + H GF P RYLG+PL +
Sbjct: 714 HGISEALDDFASWSGLHVNKDKTNLYLAGTDEVEALAISHY-GFPISTLPIRYLGLPLMS 772
Query: 4552 ERLRIANYGSLLEAITKKVISWPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDK 4731
+L+I+ Y + K+ SW +LS AGR++LI SV+ G+ FW+S + G + K
Sbjct: 773 RKLKISEY-----ELVKRFRSWAVKSLSFAGRVQLITSVITGLVNFWMSTFVLLLGCVKK 827
Query: 4732 IYGISRSFVWS-----TKHPPISWSTICLPKEEGGYGLRDLQAWNMTLLCRTLWNIQSRR 4896
I + F+WS +K I+WS +CLPK EGG LR WN T R +W + +
Sbjct: 828 IESLCSRFLWSGSIDASKGAKIAWSGVCLPKNEGGVALRRFTPWNKTFYLRFIWPLFADN 887
Query: 4897 DSLW 4908
D LW
Sbjct: 888 DVLW 891
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 486 bits (1251), Expect = e-134
Identities = 334/1070 (31%), Positives = 514/1070 (48%), Gaps = 65/1070 (6%)
Frame = +1
Query: 2560 RCSITDRIFLATFVYGFHSIMARRPLWNSLTLLGENIA---EPWIIMGDYNSLLTVQDKE 2730
R D + + VY + + R+ LW L LL +++ +PWI++GD+N +L +
Sbjct: 45 RTEFLDDSVVVSIVYAANEAITRKELWEELLLLSVSLSGNGKPWIMLGDFNQVLCPAEHS 104
Query: 2731 GGQPVS-NYELHDLERFVHTCGLVDLRSIGCRLTWTNGS----VSSKLDRAMVNSQWLIA 2895
++ N + + L DL G TW N S V+ KLDR +VN W
Sbjct: 105 QATSLNVNRRMKVFRDCLFEAELCDLVFKGNTFTWWNKSATRPVAKKLDRILVNESWCSR 164
Query: 2896 DYESYVEFLPPGCLSDH-SCGIVST--LAREKRCNRPFKFYNMWTLHEGFQDLVASSWDE 3066
+Y F P SDH SCG++ + REKR PF+FYN + F LV W
Sbjct: 165 FPSAYAVFGEPD-FSDHASCGVIINPLMHREKR---PFRFYNFLLQNPDFISLVGELWYS 220
Query: 3067 -PISGNAQFALKAKLTRLKGKLRELDKLHFQHISEQALRAKSVLEDAQRSLLSGAGPPN- 3240
+ G++ F + KL LK +R +F ++ ++ A +++ Q LS PN
Sbjct: 221 INVVGSSMFKMSKKLKALKNPIRTFSMENFSNLEKRVKEAHNLVLYRQNKTLSDPTIPNA 280
Query: 3241 --DYEVIRKRATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQ 3414
+ E RK +L +AE+ F+ QR++ ++ D T +FH + N I +
Sbjct: 281 ALEMEAQRKWL-ILVKAEESFFCQRSRVTWMGEGDSNTSYFHRMADSRKAVNTIHIIIDD 339
Query: 3415 SGDETTSLDEVAEEFVGYFQDLLGKTGQCTPL-----DSNTISGNHLSQAQREELVVPIT 3579
+G + + + E + YF +LLG G+ P D + + S Q++EL + +
Sbjct: 340 NGVKIDTQLGIKEHCIEYFSNLLG--GEVGPPMLIQEDFDLLLPFRCSHDQKKELAMSFS 397
Query: 3580 NEEIKNALFDIGADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSI 3759
++IK+A F ++K GPDGF +F+ W IG + AV EFF LLKQWN T++
Sbjct: 398 RQDIKSAFFSFPSNKTSGPDGFPVEFFKETWSVIGTEVTDAVSEFFTSSVLLKQWNATTL 457
Query: 3760 ALIPKSDHSPCVTDYRPISCCT----VFYKVISKVLSARLANVMSSLLDPAQVAFVKDRS 3927
LIPK ++ + D+RPISC YKVI+++L+ RL ++S ++ P Q AF+ R
Sbjct: 458 VLIPKITNASKMNDFRPISCNDFGPITLYKVIARLLTNRLQCLLSQVISPFQSAFLPGRF 517
Query: 3928 IGENIHLAQELLRKYARKRISPRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIH 4107
+ EN+ LA EL++ Y R+ I PR M+KVDL+KAFD++ W F++SAL G P +F WI
Sbjct: 518 LAENVLLATELVQGYNRQNIDPRGMLKVDLRKAFDSIRWDFIISALKAIGIPDRFVYWIT 577
Query: 4108 ECISTVSYSVSLNGGLYGFFSGRRGLRQGDPLSPLLFGLCLEVFSRSMKEASRLDGFHYH 4287
+CIST ++SV +NG GFF RGLRQG+PLSP LF L +EVFS + + HYH
Sbjct: 578 QCISTPTFSVCVNGNTGGFFKSTRGLRQGNPLSPFLFVLAMEVFSSLLNSRFQAGYIHYH 637
Query: 4288 PRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVAGMEE 4467
P+ + + ++HL +ADD+++F SSL+ I L DF +GL N K++LY+AG++
Sbjct: 638 PKTSPLSISHLMFADDIMVFFDGGSSSLHGISEALEDFAFWSGLVLNREKTHLYLAGLDR 697
Query: 4468 QLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLSHAGR 4647
+ +LRIA YG LLE + K+ SW LS AGR
Sbjct: 698 ---------------------IEASTIARKLRIAEYGPLLEKLAKRFRSWSVKCLSFAGR 736
Query: 4648 IELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS-----TKHPPISWSTICLPKE 4812
++LI SV+ G+ FW+S +P G + +I + F+WS K ++WS +CLPKE
Sbjct: 737 VQLIASVISGIINFWISTFILPKGCVKRIEALCARFLWSGNIDVKKGAKVAWSEVCLPKE 796
Query: 4813 EGGYGLRDLQAWNMTLLCRTLWNIQSRRDSLWV-KWIHQHYL------------------ 4935
EGG GLR T+L TLW+ ++ S W W L
Sbjct: 797 EGGVGLR-----RFTVLNTTLWD--GKKISFWFDNWSPLGPLFKLFGSSGPRALCIPIQA 849
Query: 4936 ----RSEDFWHWRGKPSDSPLIKCLLQIRDVLLQRTTSIGAAKMKLTEWFAEGENGTALA 5103
D P + L+ + + L S + + + F A
Sbjct: 850 KVADACSDVGWLISPPRTDQALALLIHLTTIALPCFDSSPDTFVWIVDDFTCHGFSAART 909
Query: 5104 YDFFRPKKPKVPWFSVIWKSILMPKHRFTVWLLAHGKLRTADSLS---YEPSKMCALCQQ 5274
++ RPKKP W +W +PKH F +W+ +L T L+ + C LC
Sbjct: 910 WEAMRPKKPVKDWTKSVWFKGSVPKHAFNMWVSHLNRLPTRQRLAAWGVTTTTDCCLCSS 969
Query: 5275 HEESNGHIFFECAIAKSLLDRVVRWMDIKFDIT-------SMAKLLDVFQRHYKGKGRQV 5433
ES H+ C + V W + F +T S A+LL + R K +
Sbjct: 970 RPESRDHLLLYCVFS------AVIWKLVFFRLTPSQAIFNSWAELLS-WTRINSSKAPSL 1022
Query: 5434 KARYLAVSSMIYLIWEARNRSRFEGIVPCVERMFHKVQ---IHVWRFVDI 5574
R +A + ++ +W+ RN I +FH + +++R++ I
Sbjct: 1023 -LRKIAAQASVFHLWKQRNNVLHNSIFISPATVFHFIDRELENLYRYIQI 1071
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 453 bits (1165), Expect = e-124
Identities = 274/813 (33%), Positives = 426/813 (52%), Gaps = 34/813 (4%)
Frame = +1
Query: 2680 WIIMGDYNSLLTVQDKEGGQPVSNYELHDLER-----FVHTCGLVDLRSIGCRLTWTNGS 2844
W++ D N+ LT K + L E F++ V+ R R+ W +
Sbjct: 431 WVVWRD-NARLTPVFKSSQMITCSILLEGKEEEFFCSFIYASNFVEER----RILWED-- 483
Query: 2845 VSSKLDRAMV-NSQWLIA-DYESYVE-----------FLPPGCLSDHSCGIVSTLAREKR 2985
+ S D ++ N W++ D+ +E + PPG G + A
Sbjct: 484 IRSHHDSPLIRNKPWILCGDFNEILEGGEHSNYDNSPYTPPGMRDFQEIGRLMLEAAATG 543
Query: 2986 CNRPFKFYNMWTLHEGFQDLVASSWDEP----ISGNAQFALKAKLTRLKGKLRELDKLHF 3153
+PFKF N+ T F +V S W +S +A + KL LK LREL K
Sbjct: 544 GRKPFKFVNVLTKLPQFLPVVESHWASSAPLYVSTSALYRFSKKLKTLKPHLRELGKEKL 603
Query: 3154 QHISEQALRAKSVLEDAQRSLLSGAGPPNDYEVIRKRA--TLLAEAEKLFYQQRAKSVYL 3327
+ ++ A +L + Q + L+ E ++ T L+E E+ F +Q++K ++
Sbjct: 604 GDLPKRTREAHILLCEKQATTLANPSQETIAEELKAYTDWTHLSELEEGFLKQKSKLHWM 663
Query: 3328 KNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQDLLGKTGQ--- 3498
D +FH + RN+I ++ + + + +E+ E +F + L +
Sbjct: 664 NVGDGNNSYFHKAAQVRKMRNSIREIRGPNAETLQTSEEIKGEAERFFNEFLNRQSGDFH 723
Query: 3499 -CTPLDSNTISGNHLSQAQREELVVPITNEEIKNALFDIGADKAPGPDGFNAKFYTAAWD 3675
+ D + S + L +T EEI+ LF + +K+PGPDG+ ++F+ A W
Sbjct: 724 GISVEDLRNLMSYRCSVTDQNILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWS 783
Query: 3676 KIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVISKVL 3855
G DFIAA++ FF G L K N T +ALIPK D + + DYRPISCC V YKVISK+L
Sbjct: 784 LTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKIL 843
Query: 3856 SARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKRISPRCMIKVDLKKAFDT 4035
+ RL ++ S + Q AFVK+R + EN+ LA EL++ Y ++ ++PRC +K+D+ KAFD+
Sbjct: 844 ANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDS 903
Query: 4036 VDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSGRRGLRQGDPLSPLL 4215
V W FL++ L FP+ F WI CIST ++SV +NG L GFF RGLRQG LSP L
Sbjct: 904 VQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYL 963
Query: 4216 FGLCLEVFSRSMKEASRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLT 4395
F +C+ V S + EA+ YHP+C ++ LTHL +ADDL++F S+ ++
Sbjct: 964 FVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFK 1023
Query: 4396 DFGDKAGLRANPLKSNLYVAGMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANY 4575
+F ++GL+ + KS +Y+AG+ R + L F G P RYLG+PL T+++ A+Y
Sbjct: 1024 EFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADY 1083
Query: 4576 GSLLEAITKKVISWPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSF 4755
L+EA+ K+ SW +LS+AGR+ L+ SV+ + FW+S +P+G I +I + +F
Sbjct: 1084 SPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAF 1143
Query: 4756 VWS-----TKHPPISWSTICLPKEEGGYGLRDLQAWNMTLLCRTLWNIQSRRDSLWVKWI 4920
+WS K I+WS+IC PK+EGG G++ L N + +W + S + SLWV WI
Sbjct: 1144 LWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWI 1203
Query: 4921 HQHYLRSEDFWHWRGKPS-DSPLIKCLLQIRDV 5016
+R FW + S S + K LL+ R++
Sbjct: 1204 WTFIIRKGTFWSANERSSLGSWMWKKLLKYREL 1236
Score = 61.6 bits (148), Expect = 4e-06
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 7/199 (3%)
Frame = +2
Query: 1157 YEDIETVEDSVGYCLVGCFMGRHPGRNGVHAIASR-W-----RVPYKFYMHKSGWVVYRF 1318
+ED + D + L+G F P VH I ++ W V Y+ + + +R
Sbjct: 58 FEDSTPLWDDL---LIGRFPQISPHIAKVHVIVNKIWPLGDKTVKIDAYVVDTKTIKFRI 114
Query: 1319 DTPEDRDKVLRGGPYFAFGIPLFL-KYMPRCFLFEEDGRYIPAWIQIHKLPPDCWTSKVL 1495
R +VLR G + +P+ + K+ P + + + +P WI I +P +T K L
Sbjct: 115 RESSVRARVLRRGMWNIADMPMIVSKWSPVAEDAQPEIKTMPMWITIKNVPRSMFTWKGL 174
Query: 1496 GLIGSEIGKPLYTDKLTQTRERLTYARLLVEVSVIGEKVKMVPITLPTGVQLDLEIIYES 1675
+ S IG+P T A++ VE + E K TGV +E Y
Sbjct: 175 SFLASPIGEPKKLHPDTVLCNSFEEAKVFVEADLTQEMPKQFRFKSETGVDAMVEYKYPW 234
Query: 1676 MPDFCEECRRIGHQKEACM 1732
+P C C + GH +E C+
Sbjct: 235 LPPRCSSCSKWGHIQEVCL 253
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 452 bits (1163), Expect = e-124
Identities = 328/1124 (29%), Positives = 521/1124 (46%), Gaps = 27/1124 (2%)
Frame = +1
Query: 2200 STTSYANRQPKWAT-ITGPSSPLYTWIMKIASWNIRGFHKALKHGGVQHLLKQKEIQVMA 2376
ST + KW I P + L ++ A N R + V+ + + V
Sbjct: 22 STKAKKKELKKWHNRIRPPVTELQGFVDGRAGLNSRNRQRV-----VRSWIASNNLLVGC 76
Query: 2377 SIETKLDDDALDIIMQRKFSGMGMANNFNYSNRGRILLLWDMHRVSLDVLMATSQYMHCR 2556
+ET + + + ++ G M +N+ S GRI ++WD +S+ V T Q M C
Sbjct: 77 FLETHVAQENANSVLASTLPGWRMDSNYCCSELGRIWIVWDPS-ISVLVFKRTDQIMFCS 135
Query: 2557 VRCSITDRIFLATFVYGFHSIMARRPLWNSLTLLGENI---AEPWIIMGDYNSLLTVQDK 2727
++ + F FVYG +S + RR LW + +L PW+++GD+N + +
Sbjct: 136 IKIPSLLQSFAVAFVYGRNSELDRRSLWEDILVLSRTSPLSVTPWLLLGDFNQIAAASEH 195
Query: 2728 EG-GQPVSNYE-LHDLERFVHTCGLVDLRSIGCRLTWTN----GSVSSKLDRAMVNSQWL 2889
Q + N + DL+ + L DL S G TW+N + KLDRA+ N +W
Sbjct: 196 YSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFFTWSNHQQDNPILRKLDRALANGEWF 255
Query: 2890 IADYESYVEFLPPGCLSDHSCGIVSTLAREKRCNRPFKFYNMWTLHEGFQDLVASSWDE- 3066
+ F PPG SDH+ I+ + + FK+++ + H + ++++W+E
Sbjct: 256 AVFPSALAVFDPPGD-SDHAPCIILIDNQPPPSKKSFKYFSFLSSHPSYLAALSTAWEEN 314
Query: 3067 PISGNAQFALKAKLTRLKGKLRELDKLHFQHISEQALRAKSVLEDAQRSLLSGAGPPNDY 3246
+ G+ F+L+ L K R L++L F +I ++ ++ + LED Q LL+ P+D
Sbjct: 315 TLVGSHMFSLRQHLKVAKLCCRTLNRLRFSNIQQRTAQSLTRLEDIQVELLTS---PSDT 371
Query: 3247 -----EVIRKRATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTK 3411
V RK+ A A + F++Q+++ +L D T+FFH V + N I L
Sbjct: 372 LFRREHVARKQWIFFAAALESFFRQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRG 431
Query: 3412 QSGDETTSLDEVAEEFVGYFQDLLGKTGQ-CTPLDSNTISGN---HLSQAQREELVVPIT 3579
G ++D++ + Y+ LLG + TP I G +L +
Sbjct: 432 DDGFRVENVDQIKGMLIAYYSHLLGIPSENVTPFSVEKIKGLLPFRCDSFLASQLTTIPS 491
Query: 3580 NEEIKNALFDIGADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSI 3759
EEI LF + +KAPGPDGF +F+ AW + +AA++EFF G L + +N T+I
Sbjct: 492 EEEITQVLFSMPRNKAPGPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAI 551
Query: 3760 ALIPKSDHSPCVTDYRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGEN 3939
LIPK + +T +RP++CCT YKVI++++S RL + + QV F+K R + EN
Sbjct: 552 TLIPKVTGADRLTQFRPVACCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGRLLCEN 611
Query: 3940 IHLAQELLRKYARKRISPRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECIS 4119
+ LA EL+ + + R ++VD+ KA+D V+W FL++ L P F WI CIS
Sbjct: 612 VLLASELVDNFEADGETTRGCLQVDISKAYDNVNWEFLINILKALDLPLVFIHWIWVCIS 671
Query: 4120 TVSYSVSLNGGLYGFFSGRRGLRQGDPLSPLLFGLCLEVFSRSMKEASRLDGFHYHPRCA 4299
+ SYS++ NG L GFF G++G+RQGDP+S LF L ++V S+S+ + F+ HP C
Sbjct: 672 SASYSIAFNGELIGFFQGKKGIRQGDPMSSHLFVLVMDVLSKSLDLGALNGLFNLHPNCL 731
Query: 4300 EVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVAGMEEQLRG 4479
+THL++ADD+L+F+ SS+ I+ L DF +GL N K+ L + G
Sbjct: 732 APIITHLSFADDVLVFSDGAASSIAGILTILDDFRQGSGLGINREKTELLLDGGNFARNR 791
Query: 4480 ELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLSHAGRIELI 4659
L G G P RYLG+PL ++++R +Y L++ I + SW LS AGR++L+
Sbjct: 792 SLADNLGITHGSLPVRYLGVPLMSQKMRRQDYQPLVDRINSRFTSWTARHLSFAGRLQLL 851
Query: 4660 RSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS---TKHPPISWSTICLPKEEGGYGL 4830
+ + + L P + + G++ SF W T H P+ T G L
Sbjct: 852 NWIWR--KLCKLRPFARPFIICEVGSGVTASF-WHDNWTDHGPLLHLTGPAGPLLAGLPL 908
Query: 4831 RDLQAWNMTLLCRTLWNIQSRRDSLWVKWIHQHYLRSEDFWHWRGKPSDSPLIKCLLQIR 5010
+ L W I S R V + Q L PS + LI C
Sbjct: 909 NSVV---RDALRDDTWRISSSRSRNPVITLLQRVL-----------PSAASLIDC--PHD 952
Query: 5011 DVLLQRTTSIGAAKMKLTEWFAEGENGTALAYDFFRPKKPKVPWFSVIWKSILMPKHRFT 5190
D L K+ TA + + +P V W +W +PK F
Sbjct: 953 DTYL----------WKIGHHAPSNRFSTADTWSYLQPSSTSVLWHKAVWFKDHVPKQAFI 1002
Query: 5191 VWLLAHGKLRTADSL---SYEPSKMCALCQQHEESNGHIFFECAIAKSLLDRVVRWMDIK 5361
W++AH +L T D L + C LC +ES H+FF C + + +R +++
Sbjct: 1003 CWVVAHNRLHTRDRLRRWGFSIPPTCVLCNDLDESREHLFFRCQFSSEIWSFFMRALNLN 1062
Query: 5362 FDITSMAKLLDVFQRHYKGKGRQVK-ARYLAVSSMIYLIWEARN 5490
M LL + R + L + +Y IW RN
Sbjct: 1063 PPPQFMHCLLWTLT---ASRDRNITLITKLLFHASVYFIWRERN 1103
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 446 bits (1146), Expect = e-122
Identities = 270/760 (35%), Positives = 407/760 (53%), Gaps = 30/760 (3%)
Frame = +1
Query: 2626 RRPLWNSLTLLGENI---AEPWIIMGDYNSLLTVQDKEGGQ--PVSNYELHDLERFVHTC 2790
R+ LWN L ++ ++PWII GD+N +L +++ + PV+ + D + V+ C
Sbjct: 4 RKELWNDLRDHSDSPIIRSKPWIIFGDFNEILDMEEHSNSRENPVTTTGMRDFQMAVNHC 63
Query: 2791 GLVDLRSIGCRLTWTNGS----VSSKLDRAMVNSQWLIADYESYVEFLPPGCLSDHSCGI 2958
+ DL G TW+N ++ KLDR +VN WL + SY F GC C I
Sbjct: 64 SITDLAYHGPLFTWSNKRENDLIAKKLDRVLVNDVWLQSFPRSYSVFEAGGCSDHLRCRI 123
Query: 2959 VSTLAREK--RCNRPFKFYNMWTLHEGFQDLVASSWDEP----ISGNAQFALKAKLTRLK 3120
+ + RPFKF N+ T E F V S W+E +S ++ F KL LK
Sbjct: 124 NLNVGAGAVVKGKRPFKFVNVITEMEHFIPTVESYWNETEAIFMSTSSLFRFSKKLKGLK 183
Query: 3121 GKLRELDKLHFQHISEQALRAKSVLEDAQRSLLSGAGPPNDYEVIRKRATL--LAEAEKL 3294
LR L K ++ +Q A L Q ++ P + E A +A E+
Sbjct: 184 PLLRNLGKERLGNLVKQTKEAFETLCQKQAMKMANPSPSSMQEENEAYAKWDHIAVLEEK 243
Query: 3295 FYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQ 3474
F +QR+K +L DR K FH V +N+I ++ G + +++ E +F+
Sbjct: 244 FLKQRSKLHWLDIGDRNNKAFHRAVVAREAQNSIREIICHDGSVASQEEKIKTEAEHHFR 303
Query: 3475 DLLGKTGQCTPLDSNTISGNHL--------SQAQREELVVPITNEEIKNALFDIGADKAP 3630
+ L Q P D I+ L S + +E L ++ EEI +F + DK+P
Sbjct: 304 EFL----QLIPNDFEGIAVEELQDLLPYRCSDSDKEMLTNHVSAEEIHKVVFSMPNDKSP 359
Query: 3631 GPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRP 3810
GPDG+ A+FY AW+ IG +FI A++ FF G L K N T +ALIPK + + DYRP
Sbjct: 360 GPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYRP 419
Query: 3811 ISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKRIS 3990
ISCC V YKVISK+++ RL V+ + Q AFVKDR + EN+ LA E+++ Y + +S
Sbjct: 420 ISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVS 479
Query: 3991 PRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFS 4170
RC +K+D+ KAFD+V W FL++ L FP +F WI CI+T S+SV +NG L G FS
Sbjct: 480 SRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELAGVFS 539
Query: 4171 GRRGLRQGDPLSPLLFGLCLEVFSRSMKEASRLDGFHYHPRCAEVELTHLAYADDLLLFA 4350
R LRQG LSP LF + ++V S+ + +A F YHP+C + LTHL++ADDL++ +
Sbjct: 540 SARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMILS 599
Query: 4351 RADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVAGMEEQLRGELLHITGFQQGVFPFRY 4530
V S++ I+ L +F +GL+ + KS +Y+AG++ + E++ F G P RY
Sbjct: 600 DGKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRY 659
Query: 4531 LGIPLATERLRIANYGSLLEAITKKVISWPKHTLSHAGRIELIRSVLQGVECFWLSILPI 4710
LG+PL ++RL ++ L+E + KK+ +W LS AGR+ LI S L + FW++ +
Sbjct: 660 LGLPLVSKRLTASDCLPLIEQLRKKIEAWTSRFLSFAGRLNLISSTLWSICNFWMAAFRL 719
Query: 4711 PSGVIDKIYGISRSFVW-----STKHPPISWSTICLPKEE 4815
P I +I + +F+W S+ +SW IC PK+E
Sbjct: 720 PRACIREIDKLCSAFLWSGTELSSNKAKVSWEAICKPKKE 759
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 442 bits (1138), Expect = e-121
Identities = 276/912 (30%), Positives = 432/912 (47%), Gaps = 39/912 (4%)
Frame = +1
Query: 2905 SYVEFLPPGCLSDHSCGIVSTLAREKRCNRPFKFYNMWTLHEGFQDLVASSWDEPISGNA 3084
S + FLPPG +SDH+ +V + PFKF+N E F +V++ W + G+
Sbjct: 137 SVLSFLPPG-ISDHAAMVVKVGLPFRIRKAPFKFFNFLADREDFIPIVSAVWATNVWGSK 195
Query: 3085 QFALKAKLTRLKGKLRELDKLHFQHISEQALRAKSVLEDAQRSLLSGAGPPNDYEVIRKR 3264
QF + KL +K + + L+ ++ E+ L+ KS ++
Sbjct: 196 QFQVWRKLKLVKNQFKLLNC----NVVEKLLKKKSRVQ---------------------- 229
Query: 3265 ATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDE 3444
+LK D+ + FF + ++ RN I + + G +
Sbjct: 230 -------------------WLKKGDKNSTFFFKTMTKHRNRNRIATINRSDGPDLAK--S 268
Query: 3445 VAEEFVGYFQDLLGKTGQCTPLDSNTISGNHLSQAQREELVVPITNEEIKNALFDIGADK 3624
+ EF T+++I+ F + +K
Sbjct: 269 LCNEF---------------------------------------THDDIRAVFFSMNPNK 289
Query: 3625 APGPDGFNAKFYTAAWDKIGDDFIAA-VKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTD 3801
+PGPDGFN F+ AW IGD+ +AA VKEFF +G LL + N T I L+PK + ++D
Sbjct: 290 SPGPDGFNGCFFQKAWLVIGDNVVAAAVKEFFSYGSLLMELNSTIITLVPKVANPTTMSD 349
Query: 3802 YRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARK 3981
+RPISCC FYK+I+K+L+ RL + ++ P+Q F+ R IG+NI LAQE++ Y +
Sbjct: 350 FRPISCCNTFYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHKA 409
Query: 3982 RISPRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYG 4161
PRC VD+ KA DTV+W F+++ L + P GWI CIS+ +SV +NG L G
Sbjct: 410 DGQPRCTFMVDMMKANDTVEWDFIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAG 469
Query: 4162 FFSGRRGLRQGDPLSPLLFGLCLEVFSRSMKEASRLDG-FHYHPRCAEVELTHLAYADDL 4338
FF+ RRGLRQGDPLSP LF + +EV S ++ F YH RC ++ L+HL +ADDL
Sbjct: 470 FFARRRGLRQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDL 529
Query: 4339 LLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVAGMEEQLRGELLHITGFQQGVF 4518
L+F D +S+ + ++F + L+AN +S +++AG++ +L +T F G
Sbjct: 530 LMFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTC 589
Query: 4519 PFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLSHAGRIELIRSVLQGVECFWLS 4698
P RYLGIPL T +LR+ + LL+ I ++ SW LS AGR++LI+SVL ++ +W S
Sbjct: 590 PVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWAS 649
Query: 4699 ILPIPSGVIDKIYGISRSFVWSTK-----HPPISWSTICLPKEEGGYGLRDLQAWNMTLL 4863
L +P V+ I R F+W+ ++WS ICLPK EGG G++DL WN L+
Sbjct: 650 HLILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALM 709
Query: 4864 CRTLWNIQSRRDSLWVKWIHQHYLRSEDFWHWRGKPSDSPLIKCLLQIRDVLLQRTTSIG 5043
+WN+ S + W W+ + L+ FW+ S + LL+IR++ +I
Sbjct: 710 ISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNAPLPSICSWNWRKLLKIRELCCSFFVNII 769
Query: 5044 AAKMKLTEWFAE----------------GENG--------------TALAYDFFRPKKPK 5133
+ WF GE+G T+ A++ RP +
Sbjct: 770 GDGRATSLWFDNWHPLGPLTLRWSSNIIGESGLSKSAMLTPNGFYSTSSAWNTLRPSRFI 829
Query: 5134 VPWFSVIWKSILMPKHRFTVWLLAHGKLRTADSLSYEPSKMCALCQQHEESNGHIFFECA 5313
VPW+ ++W F E++ H+FF+CA
Sbjct: 830 VPWYRLVW---------FVA-----------------------------ETHNHLFFDCA 851
Query: 5314 IAKSLLDRVVRWMDIKFDITSMAKLLDVFQRHYKGKGRQVKARYLAVSSMIYLIWEARNR 5493
+ + V+ D+ + + + ++KG V LA+ +++Y IW RN
Sbjct: 852 YSFGIWTHVLSKCDVSKPLLPWSDFIFWVATNWKGNSLPVVILKLALQAVVYAIWRERNN 911
Query: 5494 SRF--EGIVPCV 5523
RF E + P V
Sbjct: 912 RRFRNESLPPAV 923
>gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao]
Length = 2215
Score = 433 bits (1114), Expect = e-118
Identities = 303/1088 (27%), Positives = 499/1088 (45%), Gaps = 90/1088 (8%)
Frame = +1
Query: 2335 VQHLLKQKEIQVMASIETKLDDDALDIIMQRKFSGMGMANNFNYSNRGRILLLWDMHRVS 2514
++ L ++++A +E +D + ++ + NN +W H V
Sbjct: 869 IKKLQLMHRLKILAILEPMVDTSKAEYFRRKMGFEKVIVNNSQK--------IWLFHSVE 920
Query: 2515 L--DVLMATSQYMHCRVRCSITDRIFLATFVYGFHSIMARRPLWNSLTLLGENIAEPWII 2688
+VL+ Q +H RV D TFVY + R PLWN L L ++ PWI+
Sbjct: 921 FICEVLLDHPQCLHVRVTIPWLDLPIFTTFVYAKCTRSERTPLWNCLRNLAADMEGPWIV 980
Query: 2689 MGDYNSLLTVQDKEGGQPVSNYELHDLERFVHTCGLVDLRSIGCRLTWTNGSVSSKLDRA 2868
GD+N +L +++ G + D + CGL+D G TWTN + +LDR
Sbjct: 981 GGDFNIILKREERLYGADPHEGSIEDFASVLLDCGLLDGGFEGNPFTWTNNRMFQRLDRM 1040
Query: 2869 MVNSQWLIADYESYVEFLPPGCLSDHSCGIVSTLAREKRCNRPFKFYNMWTLHEGFQDLV 3048
+ N QW+ + ++ L SDH ++S ++ F+F + W LH F V
Sbjct: 1041 VYNQQWINKFPITRIQHLNRDG-SDHCPLLLSCSNSSEKAPSSFRFLHAWALHHNFNASV 1099
Query: 3049 ASSWDEPISGNAQFALKAKLTRLKGKLRELDKLHFQHI------SEQALRAKSVLEDAQR 3210
+W+ PI+G+ A +K RLK L+ +K F I +E+ + +L ++
Sbjct: 1100 EGNWNLPINGSGLMAFWSKQKRLKQHLKWWNKTVFGDIFSNIKEAEKRVEECEILHQQEQ 1159
Query: 3211 SLLSGAGPPNDYEVIRKRATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDLVKRNNKRN 3390
++ S Y + K+ ++ E++F++Q++ ++ +R TKFFH +++ R+
Sbjct: 1160 TIGSRIQLNKSYAQLNKQLSM----EEIFWKQKSGVKWVVEGERNTKFFHMRMQKKRIRS 1215
Query: 3391 AIIKLTKQSGDETTSLDEVAEEFVGYFQDLLGKTGQCTPLDSNTISGNHLSQAQREELVV 3570
I K+ +Q G+ +++ + + +F LL +++ + +S L
Sbjct: 1216 HIFKIQEQDGNWIEDPEQLQQSAIDFFSSLLKAESCDDTRFQSSLCPSIISDTDNGFLCA 1275
Query: 3571 PITNEEIKNALFDIGADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEFFHHGKLLKQWNH 3750
T +E+K A+F I + A GPDGF++ FY WD I D AVKEFFH + +
Sbjct: 1276 EPTLQEVKEAVFGIDPESAAGPDGFSSHFYQQCWDIIAHDLFEAVKEFFHGADIPQGMTS 1335
Query: 3751 TSIALIPKSDHSPCVTDYRPISCCTVFYKVISKVLSARLANVMSSLLDPAQVAFVKDRSI 3930
T++ LIPK+ + +++RPIS CTV K+I+K+L+ RLA ++ S++ Q FV R I
Sbjct: 1336 TTLVLIPKTTSASKWSEFRPISLCTVMNKIITKILANRLAKILPSIITENQSGFVGGRLI 1395
Query: 3931 GENIHLAQELLRKYARKRISPRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHE 4110
+NI LAQEL+ K +K +K+D+ KA+D +DW FL L GF Q+ G I +
Sbjct: 1396 SDNILLAQELIGKLDQKNRGGNVALKLDMMKAYDRLDWSFLFKVLQHLGFNAQWIGMIQK 1455
Query: 4111 CISTVSYSVSLNGGLYGFFSGRRGLRQGDPLSPLLFGLCLEVFSRSMKEA-SRLDGFHYH 4287
CIS +S+ LNG G+F RGLRQGD +SP LF L E +R + + HY
Sbjct: 1456 CISNCWFSLLLNGRTVGYFKSERGLRQGDSISPQLFILAAEYLARGLNALYDQYPSLHYS 1515
Query: 4288 PRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYV-AGME 4464
C+ + ++HLA+ADD+++FA S+L IM L ++ +G R NP KS + M
Sbjct: 1516 SGCS-LSVSHLAFADDVIIFANGSKSALQKIMAFLQEYEKLSGQRINPQKSCVVTHTNMA 1574
Query: 4465 EQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLSHAG 4644
R +L TGF P YLG PL ++ + L+ I +++ W TLS G
Sbjct: 1575 SSRRQIILQATGFSHRPLPITYLGAPLYKGHKKVMLFNDLVAKIEERITGWENKTLSPGG 1634
Query: 4645 RIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVW--STKHPPI---SWSTICLPK 4809
RI L+RS L + + L +L P V+++I + +F+W ST I SW I LP
Sbjct: 1635 RITLLRSTLSSLPIYLLQVLKPPVIVLERINRLLNNFLWGGSTASKRIHWASWGKIALPI 1694
Query: 4810 EEGGYGLRDLQAWNMTLLCRTLWNIQSRRDSLWVKWIHQHYLRSE--------------- 4944
EGG +R+++ + W ++ +SLW +++ Y +
Sbjct: 1695 AEGGLDIRNVEDVCEAFSMKLWWRFRT-TNSLWTQFMRAKYCGGQLPTDVQPKLHDSQTW 1753
Query: 4945 -----------------------DFWH--WRGKPSDSPLI-------KCLLQIRDVLLQR 5028
FWH W G + PL+ + Q+ D L
Sbjct: 1754 KRMVTISSITEQNIRWRIGHGELFFWHDCWMG---EEPLVNRNQAFASSMAQVSDFFLNN 1810
Query: 5029 TTSIGAAKMKLTEWFAE----------------------GENGTALAYDFFRPKKPKVPW 5142
+ ++ K L + E G+ T A+ R +K + P
Sbjct: 1811 SWNVEKLKTVLQQEVVEEIVKIPIDTSSNDKAYWTTTPNGDFSTKSAWQLIRNRKVENPV 1870
Query: 5143 FSVIWKSILMPKHRFTVWLLAHG------KLRTADSLSYEPSKMCALCQQHEESNGHIFF 5304
F+ IW + F +W L H K++T ++ + C C+ EES H+ +
Sbjct: 1871 FNFIWHKSVPLTTSFFLWRLLHDWIPVELKMKTK---GFQLASRCRCCKS-EESLMHVMW 1926
Query: 5305 ECAIAKSL 5328
+ +A +
Sbjct: 1927 KNPVANQV 1934
>gb|EOY14356.1| Uncharacterized protein TCM_033752 [Theobroma cacao]
Length = 2251
Score = 428 bits (1101), Expect = e-116
Identities = 288/1030 (27%), Positives = 483/1030 (46%), Gaps = 87/1030 (8%)
Frame = +1
Query: 2491 LWDMHRVSL--DVLMATSQYMHCRVRCSITDRIFLATFVYGFHSIMARRPLWNSLTLLGE 2664
+W H + L D+++ Q +H R+ ++ F ATFVY + R LW+ L L
Sbjct: 950 IWLFHSLELHSDIILDHPQCLHVRLTSPWLEKPFFATFVYAKCTRSERTLLWDCLRRLAA 1009
Query: 2665 NIAEPWIIMGDYNSLLTVQDKEGGQPVSNYELHDLERFVHTCGLVDLRSIGCRLTWTNGS 2844
+ EPW++ GD+N +L +++ G + D + CGL+D G TWTN
Sbjct: 1010 DNEEPWLVGGDFNIILKREERLYGSAPHEGSMEDFASVLLDCGLLDGGFEGNPFTWTNNR 1069
Query: 2845 VSSKLDRAMVNSQWLIADYESYVEFLPPGCLSDHSCGIVSTLAREKRCNRPFKFYNMWTL 3024
+ +LDR + N QW+ + ++ L SDH ++S ++ F+F + W L
Sbjct: 1070 MFQRLDRVVYNHQWINMFPITRIQHLNRDG-SDHCPLLISCFISSEKSPSSFRFQHAWVL 1128
Query: 3025 HEGFQDLVASSWDEPISGNAQFALKAKLTRLKGKLRELDKLHFQHI------SEQALRAK 3186
H F+ V +W+ PI+G+ A K RLK L+ +K F I +E+ +
Sbjct: 1129 HHDFKTSVEGNWNLPINGSGLQAFWIKQHRLKQHLKWWNKAVFGDIFSKLKEAEKRVEEC 1188
Query: 3187 SVLEDAQRSLLSGAGPPNDYEVIRKRATLLAEAEKLFYQQRAKSVYLKNSDRCTKFFHDL 3366
+L ++++ S Y + K+ + E++F++Q++ ++ +R TKFFH
Sbjct: 1189 EILHQQEQTVGSRINLNKSYAQLNKQLNV----EEIFWKQKSGVKWVVEGERNTKFFHMR 1244
Query: 3367 VKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQDLLGKTGQCTPLD----SNTISGN 3534
+++ R+ I K+ + G +++ + + YF LL + P D N++ +
Sbjct: 1245 MQKKRIRSHIFKVQEPDGRWIEDQEQLKQSAIEYFSSLL----KAEPCDISRFQNSLIPS 1300
Query: 3535 HLSQAQREELVVPITNEEIKNALFDIGADKAPGPDGFNAKFYTAAWDKIGDDFIAAVKEF 3714
+S ++ E L +E+K+A+FDI + A GPDGF++ FY W+ I D + AV++F
Sbjct: 1301 IISNSENELLCAEPNLQEVKDAVFDIDPESAAGPDGFSSYFYQQCWNTIAHDLLDAVRDF 1360
Query: 3715 FHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVISKVLSARLANVMSSLLD 3894
FH + + T++ L+PK + +++RPIS CTV K+I+K+LS RLA ++ S++
Sbjct: 1361 FHGANIPRGVTSTTLVLLPKKSSASKWSEFRPISLCTVMNKIITKLLSNRLAKILPSIIT 1420
Query: 3895 PAQVAFVKDRSIGENIHLAQELLRKYARKRISPRCMIKVDLKKAFDTVDWGFLMSALVGY 4074
Q FV R I +NI LAQEL+RK K +K+D+ KA+D +DW FL+ L +
Sbjct: 1421 ENQSGFVGGRLISDNILLAQELIRKLDTKSRGGNLALKLDMMKAYDRLDWSFLIKVLQHF 1480
Query: 4075 GFPQQFCGWIHECISTVSYSVSLNGGLYGFFSGRRGLRQGDPLSPLLFGLCLEVFSRSMK 4254
GF +Q+ G I +CIS +S+ LNG + G+F RGLRQGD +SP LF L E SR +
Sbjct: 1481 GFNEQWIGMIQKCISNCWFSLLLNGRIEGYFKSERGLRQGDSISPQLFILAAEYLSRGLN 1540
Query: 4255 EA-SRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANP 4431
+ HY + ++HLA+ADD+L+F S+L I+ L ++ + +G R N
Sbjct: 1541 ALYDQYPSLHYSSG-VPLSVSHLAFADDVLIFTNGSKSALQRILVFLQEYEEISGQRINA 1599
Query: 4432 LKSNLYV-AGMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKV 4608
KS + R + TGF + P YLG PL ++ + L+ I +++
Sbjct: 1600 QKSCFVTHTNIPNSRRQIIAQATGFNHQLLPITYLGAPLYKGHKKVILFNDLVAKIEERI 1659
Query: 4609 ISWPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVW-----STKH 4773
W LS GRI L+RSVL + + L +L P V++++ + SF+W S +
Sbjct: 1660 TGWENKILSPGGRITLLRSVLASLPIYLLQVLKPPVCVLERVNRLFNSFLWGGSAASKRI 1719
Query: 4774 PPISWSTICLPKEEGGYGLRDLQAWNMTLLCRTLWNIQSRRDSLWVKWIHQHYLRSE--- 4944
SW+ I LP EGG +R L + W ++ DSLW +++ Y R +
Sbjct: 1720 HWASWAKIALPVTEGGLDIRSLAEVFEAFSMKLWWRFRT-TDSLWTRFMRMKYCRGQLPM 1778
Query: 4945 -----------------------------------DFWH--WRGK----PSDSPLIKCLL 5001
FWH W G+ S+ ++
Sbjct: 1779 QTQPKLHDSQTWKRMLTSSTITEQHMRWRVGQGNVFFWHDCWMGEAPLISSNQEFTSSMV 1838
Query: 5002 QIRDVLLQRTTSIGAAKMKLTEWFAE----------------------GENGTALAYDFF 5115
Q+ D + +I K L + + G+ T A+
Sbjct: 1839 QVCDFFTNNSWNIEKLKTVLQQEVVDEIAKIPIDTMNKDEAYWTPTPNGDFSTKSAWQLI 1898
Query: 5116 RPKKPKVPWFSVIWKSILMPKHRFTVWLLAHGKLRTADSLSYEPSKMCALCQ--QHEESN 5289
R +K P F+ IW + F +W L H + + + ++ + C+ + EES
Sbjct: 1899 RKRKVVNPVFNFIWHKTVPLTTSFFLWRLLHDWIPVELKMKSKGLQLASRCRCCKSEESI 1958
Query: 5290 GHIFFECAIA 5319
H+ ++ +A
Sbjct: 1959 MHVMWDNPVA 1968
>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
putative protein [Arabidopsis thaliana]
Length = 1141
Score = 419 bits (1078), Expect = e-114
Identities = 260/733 (35%), Positives = 392/733 (53%), Gaps = 17/733 (2%)
Frame = +1
Query: 2455 NFNYSNRGRILLLWDMHRVSLDVLMATSQYMHCRVRCSITDRIFLATFVYGFHSIMARRP 2634
N+ +S+ G+I +LWD V + ++ + Q + C V + + + VY + R+
Sbjct: 54 NYGFSDLGKIWVLWDPS-VEVVIVAKSLQMITCEVLFPNSRTWIVISVVYAANEDDKRKE 112
Query: 2635 LWNSLTLLGEN---IAEPWIIMGDYNSLLTVQDKEGGQPVS---NYELHDLERFVHTCGL 2796
LW +T L + PWI++GD+N +L E + VS + + D + L
Sbjct: 113 LWREITALVASPVTFNRPWILLGDFNQVL--HPHEHSRHVSLNVDRRIRDFRECLLDAEL 170
Query: 2797 VDLRSIGCRLTWTNGS----VSSKLDRAMVNSQWLIADYESYVEFLPPGCLSDH-SCGIV 2961
DL G TW N S V+ K+DR +VN W S+ F PP SDH SCG+V
Sbjct: 171 SDLVYKGSSFTWWNKSKTRPVAKKIDRILVNESWSNLFPSSFGLFGPPD-FSDHASCGVV 229
Query: 2962 STLAREKRCNRPFKFYNMWTLHEGFQDLVASSW-DEPISGNAQFALKAKLTRLKGKLREL 3138
L K RPFKF+N + F +LV W + G++ F + KL LK +++
Sbjct: 230 LELDPIK-AKRPFKFFNFLLKNPEFLNLVWDVWYSTNVVGSSMFRVSKKLKALKKPIKDF 288
Query: 3139 DKLHFQHISEQALRAKSVLEDAQRSLLSGAGPPNDYEVI--RKRATLLAEAEKLFYQQRA 3312
+L++ ++ ++ A L Q L N + +++ +LA AE+ F++QR+
Sbjct: 289 SRLNYSNLEKRTEEAHETLLSFQNLTLDNPSLENAAHELEAQRKWQILATAEESFFRQRS 348
Query: 3313 KSVYLKNSDRCTKFFHDLVKRNNKRNAIIKLTKQSGDETTSLDEVAEEFVGYFQDLLGKT 3492
+ + D T++FH + N I L SG + S +A+ YF++LL
Sbjct: 349 RVTWFAEGDGNTRYFHRMADSRKSVNTITTLVDDSGTQIDSQQGIADHCALYFENLLSDD 408
Query: 3493 GQCTPL---DSNTISGNHLSQAQREELVVPITNEEIKNALFDIGADKAPGPDGFNAKFYT 3663
L D N + +Q +L ++E+IK A F + ++KA GPDGF
Sbjct: 409 NDPYSLEQDDMNLLLTYRCPYSQVADLEAMFSDEDIKAAFFGLPSNKACGPDGFPVT--- 465
Query: 3664 AAWDKIGDDFIAAVKEFFHHGKLLKQWNHTSIALIPKSDHSPCVTDYRPISCCTVFYKVI 3843
AAV+EFF G LLKQWN T+I LIPK ++ C +D+RPISC YKVI
Sbjct: 466 -----------AAVREFFISGNLLKQWNATTIVLIPKFPNASCTSDFRPISCMNTLYKVI 514
Query: 3844 SKVLSARLANVMSSLLDPAQVAFVKDRSIGENIHLAQELLRKYARKRISPRCMIKVDLKK 4023
+++L+ RL ++S ++ P+Q AF+ R + EN+ LA E++ Y + IS R M+KVDL+K
Sbjct: 515 ARLLTDRLQKLLSCVISPSQSAFLPGRLLAENVLLATEMVHGYNWRNISLRGMLKVDLRK 574
Query: 4024 AFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSGRRGLRQGDPL 4203
AFD+V W F+++AL+ G P +F WIH+CIST +++VS+NG GFF +GLRQGDPL
Sbjct: 575 AFDSVRWEFIIAALLALGVPTKFINWIHQCISTPTFTVSVNGCCGGFFKSAKGLRQGDPL 634
Query: 4204 SPLLFGLCLEVFSRSMKEASRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIM 4383
SP LF L +EVFS+ + YHP+ +++ ++HL +ADD+++F SSL+ I
Sbjct: 635 SPYLFVLAMEVFSKLLNSRFDSGYIRYHPKASDLSISHLMFADDVMIFFDGGSSSLHGIC 694
Query: 4384 GCLTDFGDKAGLRANPLKSNLYVAGMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLR 4563
L DF +GL+ N KS+ + AG+E+ R L GF QG P RYLG+PL +LR
Sbjct: 695 ETLEDFASWSGLKVNNDKSHFFCAGLEQAERNSLA-AYGFPQGCLPIRYLGLPLMCRKLR 753
Query: 4564 IANYGSLLEAITK 4602
IA Y LLE K
Sbjct: 754 IAEYEPLLEKSPK 766