BLASTX nr result

ID: Zingiber23_contig00022936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00022936
         (419 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japon...    56   6e-06

>ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Brachypodium distachyon]
          Length = 612

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/39 (74%), Positives = 32/39 (82%)
 Frame = +1

Query: 301 LWSRYLSSQAGANSGDKEDYLEDGFSDLEVPLESADSVD 417
           +W+R  SSQAGANSGDKE+ LEDGFSDLEVP E AD  D
Sbjct: 69  MWNRTFSSQAGANSGDKEEDLEDGFSDLEVPPE-ADKKD 106


>dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
           gi|56784204|dbj|BAD81589.1| putative DNA-binding protein
           [Oryza sativa Japonica Group]
           gi|125569936|gb|EAZ11451.1| hypothetical protein
           OsJ_01319 [Oryza sativa Japonica Group]
          Length = 611

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = +1

Query: 301 LWSRYLSSQAGANSGDKEDYLEDGFSDLEVPLESADSVD 417
           +WSR  SSQAGA+SGDK+D LE+GFSDLEVP E AD  D
Sbjct: 70  MWSRVFSSQAGASSGDKQDELEEGFSDLEVPPE-ADKKD 107


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