BLASTX nr result
ID: Zingiber23_contig00022739
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00022739
(719 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003563014.1| PREDICTED: uncharacterized protein LOC100845... 88 2e-15
ref|XP_002447454.1| hypothetical protein SORBIDRAFT_06g001280 [S... 87 4e-15
ref|NP_001045721.1| Os02g0121800 [Oryza sativa Japonica Group] g... 87 5e-15
ref|XP_006657769.1| PREDICTED: uncharacterized protein LOC102706... 87 5e-15
ref|NP_001059806.1| Os07g0521000 [Oryza sativa Japonica Group] g... 86 9e-15
gb|EEC82160.1| hypothetical protein OsI_26228 [Oryza sativa Indi... 86 9e-15
ref|XP_004975037.1| PREDICTED: uncharacterized protein LOC101765... 86 2e-14
ref|NP_001149724.1| succinate dehydrogenase subunit 3 [Zea mays]... 83 1e-13
gb|AFW68520.1| succinate dehydrogenase subunit 3 [Zea mays] 82 1e-13
gb|EAY84260.1| hypothetical protein OsI_05640 [Oryza sativa Indi... 82 2e-13
ref|XP_004957880.1| PREDICTED: uncharacterized protein LOC101764... 81 4e-13
ref|XP_004957879.1| PREDICTED: uncharacterized protein LOC101764... 81 4e-13
ref|XP_003563128.1| PREDICTED: uncharacterized protein LOC100828... 80 7e-13
ref|NP_001147745.1| LOC100281355 [Zea mays] gi|195605110|gb|ACG2... 80 9e-13
ref|XP_006646804.1| PREDICTED: uncharacterized protein LOC102712... 79 1e-12
gb|AAP80640.1|AF475119_1 succinate dehydrogenase subunit 3, part... 77 7e-12
dbj|BAK00145.1| predicted protein [Hordeum vulgare subsp. vulgare] 75 2e-11
dbj|BAJ84798.1| predicted protein [Hordeum vulgare subsp. vulgare] 75 2e-11
>ref|XP_003563014.1| PREDICTED: uncharacterized protein LOC100845567 [Brachypodium
distachyon]
Length = 129
Score = 88.2 bits (217), Expect = 2e-15
Identities = 55/125 (44%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
Frame = +2
Query: 5 EKNARFTVHADASFSLRGFLN------------GTSGYPKMARVHQKLPNGXXXXXXXXX 148
++N RF DA F+LRG L G S AR ++ P G
Sbjct: 5 QRNTRFAPLRDAPFALRGALGSANSSFNSMDGLGLSSSLGQARGYRSSPLGALQPKISQS 64
Query: 149 XXXXXXXTRGI---VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFS 319
+R + V+NRPLSPHLP+KKPQL ATFSISHRIFG +L +AI+ IP+A KFS
Sbjct: 65 GSRSLHTSRPLAAPVANRPLSPHLPLKKPQLSATFSISHRIFGVALGAAIISIPLATKFS 124
Query: 320 LLLDV 334
L+ DV
Sbjct: 125 LMFDV 129
>ref|XP_002447454.1| hypothetical protein SORBIDRAFT_06g001280 [Sorghum bicolor]
gi|241938637|gb|EES11782.1| hypothetical protein
SORBIDRAFT_06g001280 [Sorghum bicolor]
Length = 117
Score = 87.4 bits (215), Expect = 4e-15
Identities = 53/117 (45%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Frame = +2
Query: 2 MEK---NARFTVHADASFSLRGFLNGTSGYPKMARVHQKLPNGXXXXXXXXXXXXXXXXT 172
MEK NARF +D F+LRG L TS + R + P +
Sbjct: 1 MEKCNSNARFAPLSDTPFALRGALGSTSSNLEQTRGYASSPLAAQRPKISAPGSRPLHTS 60
Query: 173 RGI---VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFSLLLDV 334
R + V+NRPLSPHLP+KKPQ ATFSISHRIFG +L AI+ +P+A KFSL+ V
Sbjct: 61 RPLSSPVANRPLSPHLPLKKPQFSATFSISHRIFGVALGVAIISVPLATKFSLMFGV 117
>ref|NP_001045721.1| Os02g0121800 [Oryza sativa Japonica Group]
gi|14861488|gb|AAK73694.1| succinate dehydrogenase
subunit 3 [Oryza sativa] gi|41052751|dbj|BAD07607.1|
succinate dehydrogenase subunit 3 [Oryza sativa Japonica
Group] gi|113535252|dbj|BAF07635.1| Os02g0121800 [Oryza
sativa Japonica Group] gi|215737053|dbj|BAG95982.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|222622073|gb|EEE56205.1| hypothetical protein
OsJ_05172 [Oryza sativa Japonica Group]
Length = 129
Score = 87.0 bits (214), Expect = 5e-15
Identities = 59/130 (45%), Positives = 73/130 (56%), Gaps = 19/130 (14%)
Frame = +2
Query: 2 MEK---NARFTVHADASFSLRGFLNGTSGYP-------------KMARVHQKLPNGXXXX 133
MEK N+RF DA F+LRG L G+SG + AR + P G
Sbjct: 1 MEKYHSNSRFAPFRDAPFALRGAL-GSSGSSFSSIDSLRRSSTLEQARGYTSRPLGAVRP 59
Query: 134 XXXXXXXXXXXXTRGI---VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPI 304
+ + V+NRPLSPHLP+KKPQL ATFSISHRIFGA+L +AI+ IP+
Sbjct: 60 KMLPSGCRPLHTSHPLSAPVANRPLSPHLPLKKPQLSATFSISHRIFGAALGAAIISIPL 119
Query: 305 AWKFSLLLDV 334
A KFSL+ DV
Sbjct: 120 ATKFSLMFDV 129
>ref|XP_006657769.1| PREDICTED: uncharacterized protein LOC102706021 [Oryza brachyantha]
Length = 129
Score = 87.0 bits (214), Expect = 5e-15
Identities = 54/125 (43%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Frame = +2
Query: 5 EKNARFTVHADASFSLRGFLNGT------------SGYPKMARVHQKLPNGXXXXXXXXX 148
+ N RF DA F+LRG L + S AR + P G
Sbjct: 5 QSNTRFVPFRDAPFALRGALGSSNSSFNNMDYLNQSSSSGQARSYTSSPLGAVRPKMSPS 64
Query: 149 XXXXXXXTRGI---VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFS 319
+R + V+NRPLSPHLP+KKPQL ATFSISHRIFGA+L + I+ IP+A KFS
Sbjct: 65 GTRPLHTSRPLSAPVANRPLSPHLPLKKPQLSATFSISHRIFGAALGAVIISIPLATKFS 124
Query: 320 LLLDV 334
L+ DV
Sbjct: 125 LMFDV 129
>ref|NP_001059806.1| Os07g0521000 [Oryza sativa Japonica Group]
gi|14861490|gb|AAK73695.1|AF362742_1 succinate
dehydrogenase subunit 3 [Oryza sativa]
gi|34393293|dbj|BAC83222.1| succinate dehydrogenase
subunit 3 [Oryza sativa Japonica Group]
gi|113611342|dbj|BAF21720.1| Os07g0521000 [Oryza sativa
Japonica Group] gi|125600467|gb|EAZ40043.1| hypothetical
protein OsJ_24481 [Oryza sativa Japonica Group]
gi|215765011|dbj|BAG86708.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 129
Score = 86.3 bits (212), Expect = 9e-15
Identities = 54/125 (43%), Positives = 68/125 (54%), Gaps = 15/125 (12%)
Frame = +2
Query: 5 EKNARFTVHADASFSLRGFLNGT------------SGYPKMARVHQKLPNGXXXXXXXXX 148
+ ARF +DA F+LRG L + S AR + P G
Sbjct: 5 QSKARFAPLSDAPFALRGALGSSNSSFNNIDHLRQSSSSGQARSYTSSPLGALRPKMFPS 64
Query: 149 XXXXXXXTRGI---VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFS 319
+R + V+NRPLSPHLP+KKPQL ATFSISHRIFGA+L + I+ IP+A KFS
Sbjct: 65 GNRLLHTSRPLSAPVANRPLSPHLPLKKPQLSATFSISHRIFGAALGAVIISIPLATKFS 124
Query: 320 LLLDV 334
L+ DV
Sbjct: 125 LMFDV 129
>gb|EEC82160.1| hypothetical protein OsI_26228 [Oryza sativa Indica Group]
Length = 129
Score = 86.3 bits (212), Expect = 9e-15
Identities = 54/125 (43%), Positives = 68/125 (54%), Gaps = 15/125 (12%)
Frame = +2
Query: 5 EKNARFTVHADASFSLRGFLNGT------------SGYPKMARVHQKLPNGXXXXXXXXX 148
+ ARF +DA F+LRG L + S AR + P G
Sbjct: 5 QNKARFAPLSDAPFALRGALGSSNSSFNNIDHLRQSSSSGQARSYTSSPLGALRPKMSPS 64
Query: 149 XXXXXXXTRGI---VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFS 319
+R + V+NRPLSPHLP+KKPQL ATFSISHRIFGA+L + I+ IP+A KFS
Sbjct: 65 GNRLLHTSRPLSAPVANRPLSPHLPLKKPQLSATFSISHRIFGAALGAVIISIPLATKFS 124
Query: 320 LLLDV 334
L+ DV
Sbjct: 125 LMFDV 129
>ref|XP_004975037.1| PREDICTED: uncharacterized protein LOC101765081 [Setaria italica]
Length = 117
Score = 85.5 bits (210), Expect = 2e-14
Identities = 52/117 (44%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Frame = +2
Query: 2 MEK---NARFTVHADASFSLRGFLNGTSGYPKMARVHQKLPNGXXXXXXXXXXXXXXXXT 172
MEK N RF DA F++RG L +S + AR + P +
Sbjct: 1 MEKYNNNTRFAPLRDAPFAVRGALGSSSSNLEQARGYTSSPLAALRPNMSAPGSRSLHTS 60
Query: 173 RGI---VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFSLLLDV 334
R + V+NRPLSPHLP+KKPQ ATFSISHRIFG +L AI+ +P+A KFSL+ V
Sbjct: 61 RPLAAPVANRPLSPHLPLKKPQFSATFSISHRIFGVALGVAIISVPLATKFSLMFGV 117
>ref|NP_001149724.1| succinate dehydrogenase subunit 3 [Zea mays]
gi|195605954|gb|ACG24807.1| succinate dehydrogenase
subunit 3 [Zea mays] gi|195629790|gb|ACG36536.1|
succinate dehydrogenase subunit 3 [Zea mays]
Length = 117
Score = 82.8 bits (203), Expect = 1e-13
Identities = 50/117 (42%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Frame = +2
Query: 2 MEK---NARFTVHADASFSLRGFLNGTSGYPKMARVHQKLPNGXXXXXXXXXXXXXXXXT 172
MEK N +F + F+LRG L +S Y + AR + P +
Sbjct: 1 MEKYNSNTQFAPLRETPFALRGALGSSSSYLEQARGYTSSPVAALRPKMSTPGNRLLHTS 60
Query: 173 ---RGIVSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFSLLLDV 334
V+NRPLSPHLP+KKPQ ATFSISHRIFG +L AI+ +P+A KFSL+ V
Sbjct: 61 CPLSSAVANRPLSPHLPLKKPQFSATFSISHRIFGVALGVAIISVPLATKFSLMFGV 117
>gb|AFW68520.1| succinate dehydrogenase subunit 3 [Zea mays]
Length = 117
Score = 82.4 bits (202), Expect = 1e-13
Identities = 47/111 (42%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Frame = +2
Query: 11 NARFTVHADASFSLRGFLNGTSGYPKMARVHQKLPNGXXXXXXXXXXXXXXXXT---RGI 181
N +F + F+LRG L +S Y + AR + P +
Sbjct: 7 NTQFAPLRETPFALRGALGSSSSYLEQARGYTSSPVAALRPKMSTPGNRLLHTSCPLSSA 66
Query: 182 VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFSLLLDV 334
V+NRPLSPHLP+KKPQ ATFSISHRIFG +L AI+ +P+A KFSL+ V
Sbjct: 67 VANRPLSPHLPLKKPQFSATFSISHRIFGVALGVAIISVPLATKFSLMFGV 117
>gb|EAY84260.1| hypothetical protein OsI_05640 [Oryza sativa Indica Group]
Length = 168
Score = 82.0 bits (201), Expect = 2e-13
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = +2
Query: 182 VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFSLLLDV 334
V+NRPLSPHLP+KKPQL ATFSISHRIFGA+L +AI+ IP+A KFSL+ DV
Sbjct: 118 VANRPLSPHLPLKKPQLSATFSISHRIFGAALGAAIISIPLATKFSLMFDV 168
>ref|XP_004957880.1| PREDICTED: uncharacterized protein LOC101764948 isoform X2 [Setaria
italica]
Length = 117
Score = 80.9 bits (198), Expect = 4e-13
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Frame = +2
Query: 2 MEK---NARFTVHADASFSLRGFLNGTSGYPKMARVHQKLPNGXXXXXXXXXXXXXXXXT 172
MEK +F DA F+LRG L ++ + R + P G +
Sbjct: 1 MEKYYSKTKFAPFRDAPFALRGALGSSNTNLEQTRGYTSSPLGALRPKVPPSGRRPLHTS 60
Query: 173 RGI---VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFSLLLDV 334
+ V+NRPLSPHLP+KKPQL ATFSISHRIFG +L AI+ +P+A KFS++ V
Sbjct: 61 GPLSAPVANRPLSPHLPLKKPQLSATFSISHRIFGVALGVAIISVPLATKFSIMFGV 117
>ref|XP_004957879.1| PREDICTED: uncharacterized protein LOC101764948 isoform X1 [Setaria
italica]
Length = 119
Score = 80.9 bits (198), Expect = 4e-13
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Frame = +2
Query: 2 MEK---NARFTVHADASFSLRGFLNGTSGYPKMARVHQKLPNGXXXXXXXXXXXXXXXXT 172
MEK +F DA F+LRG L ++ + R + P G +
Sbjct: 3 MEKYYSKTKFAPFRDAPFALRGALGSSNTNLEQTRGYTSSPLGALRPKVPPSGRRPLHTS 62
Query: 173 RGI---VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFSLLLDV 334
+ V+NRPLSPHLP+KKPQL ATFSISHRIFG +L AI+ +P+A KFS++ V
Sbjct: 63 GPLSAPVANRPLSPHLPLKKPQLSATFSISHRIFGVALGVAIISVPLATKFSIMFGV 119
>ref|XP_003563128.1| PREDICTED: uncharacterized protein LOC100828671 [Brachypodium
distachyon]
Length = 129
Score = 80.1 bits (196), Expect = 7e-13
Identities = 55/129 (42%), Positives = 68/129 (52%), Gaps = 18/129 (13%)
Frame = +2
Query: 2 MEK---NARFTVHADASFSLRGFLN-GTSGYPKM-----------ARVHQKLPNGXXXXX 136
MEK +ARF D F+LRG L S + M AR + P
Sbjct: 1 MEKYHCDARFAAFKDTPFALRGALGIPNSSFDSMDGFRDFSSIRQARSYASCPLVAGHLK 60
Query: 137 XXXXXXXXXXXTR---GIVSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIA 307
+R G V+NRPLSPHLP+KKPQL ATFSISHRIFG +L +AI+ +P A
Sbjct: 61 VSPSESRSLHASRSLSGPVANRPLSPHLPLKKPQLSATFSISHRIFGVALGAAIISVPFA 120
Query: 308 WKFSLLLDV 334
+FSL+ DV
Sbjct: 121 TEFSLMFDV 129
>ref|NP_001147745.1| LOC100281355 [Zea mays] gi|195605110|gb|ACG24385.1| succinate
dehydrogenase subunit 3 [Zea mays]
gi|195605432|gb|ACG24546.1| succinate dehydrogenase
subunit 3 [Zea mays] gi|195613432|gb|ACG28546.1|
succinate dehydrogenase subunit 3 [Zea mays]
gi|195618284|gb|ACG30972.1| succinate dehydrogenase
subunit 3 [Zea mays] gi|195619232|gb|ACG31446.1|
succinate dehydrogenase subunit 3 [Zea mays]
gi|195641204|gb|ACG40070.1| succinate dehydrogenase
subunit 3 [Zea mays] gi|224032159|gb|ACN35155.1| unknown
[Zea mays] gi|414870914|tpg|DAA49471.1| TPA: Succinate
dehydrogenase subunit 3 isoform 1 [Zea mays]
gi|414870915|tpg|DAA49472.1| TPA: Succinate
dehydrogenase subunit 3 isoform 2 [Zea mays]
gi|414870916|tpg|DAA49473.1| TPA: Succinate
dehydrogenase subunit 3 isoform 3 [Zea mays]
gi|414870917|tpg|DAA49474.1| TPA: Succinate
dehydrogenase subunit 3 isoform 4 [Zea mays]
gi|414870918|tpg|DAA49475.1| TPA: Succinate
dehydrogenase subunit 3 isoform 5 [Zea mays]
gi|414870919|tpg|DAA49476.1| TPA: Succinate
dehydrogenase subunit 3 isoform 6 [Zea mays]
Length = 118
Score = 79.7 bits (195), Expect = 9e-13
Identities = 46/104 (44%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Frame = +2
Query: 35 DASFSLRGFLNGTSGYPKMARVHQKLPNGXXXXXXXXXXXXXXXXTR----GIVSNRPLS 202
D F+LRG L +S Y + AR + P + V+NRPLS
Sbjct: 15 DTPFALRGALGSSSSYLEQARGYTSSPLAALRPKMSSTTGNRLLHSSCPLSSPVANRPLS 74
Query: 203 PHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFSLLLDV 334
PHLP+KKPQ ATFSISHRIFG +L AI+ +P+A KFSL+ V
Sbjct: 75 PHLPLKKPQFSATFSISHRIFGVALGVAIVSVPLATKFSLMFGV 118
>ref|XP_006646804.1| PREDICTED: uncharacterized protein LOC102712499 [Oryza brachyantha]
Length = 129
Score = 79.3 bits (194), Expect = 1e-12
Identities = 57/130 (43%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Frame = +2
Query: 2 MEK---NARFTVHADASFSLRGFLNGTSG----------YP---KMARVHQKLPNGXXXX 133
MEK N RF DA F+LRG L G+SG +P + R P G
Sbjct: 1 MEKSHNNTRFAPFRDAPFALRGAL-GSSGSSFISIDGFRHPSSLEQTRGFTSGPLGALRP 59
Query: 134 XXXXXXXXXXXXTRGI---VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPI 304
+R + V+NRPLSPHLP+KKPQ+ AT SISHRI GA+L +AI+ IP+
Sbjct: 60 KMLPSGCRTLHTSRPLSAPVANRPLSPHLPLKKPQMSATLSISHRIVGAALGAAIVSIPL 119
Query: 305 AWKFSLLLDV 334
A KFSL+ DV
Sbjct: 120 ATKFSLMFDV 129
>gb|AAP80640.1|AF475119_1 succinate dehydrogenase subunit 3, partial [Triticum aestivum]
Length = 132
Score = 76.6 bits (187), Expect = 7e-12
Identities = 35/51 (68%), Positives = 45/51 (88%)
Frame = +2
Query: 182 VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFSLLLDV 334
V+NRPLSPHLP+KKPQL ATFSISHRIFGA+L +AI+ IP+A +F ++ +V
Sbjct: 82 VANRPLSPHLPLKKPQLSATFSISHRIFGAALGAAIISIPLATRFGVMFEV 132
>dbj|BAK00145.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 118
Score = 75.1 bits (183), Expect = 2e-11
Identities = 34/51 (66%), Positives = 44/51 (86%)
Frame = +2
Query: 182 VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFSLLLDV 334
V+NRPLSPHLP+KKPQL ATFSISHRIFG +L +AI+ IP+A +F ++ +V
Sbjct: 68 VANRPLSPHLPLKKPQLSATFSISHRIFGVALGAAIISIPLATRFGVMFEV 118
>dbj|BAJ84798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 129
Score = 75.1 bits (183), Expect = 2e-11
Identities = 34/51 (66%), Positives = 44/51 (86%)
Frame = +2
Query: 182 VSNRPLSPHLPVKKPQLRATFSISHRIFGASLTSAILLIPIAWKFSLLLDV 334
V+NRPLSPHLP+KKPQL ATFSISHRIFG +L +AI+ IP+A +F ++ +V
Sbjct: 79 VANRPLSPHLPLKKPQLSATFSISHRIFGVALGAAIISIPLATRFGVMFEV 129