BLASTX nr result

ID: Zingiber23_contig00022340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00022340
         (413 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003574825.1| PREDICTED: squamosa promoter-binding-like pr...    75   9e-12
gb|AGI62055.1| SQUAMOSA promoter-binding-like 7 [Erycina pusilla]      70   3e-10
dbj|BAK05794.1| predicted protein [Hordeum vulgare subsp. vulgare]     64   2e-08
ref|XP_004974002.1| PREDICTED: squamosa promoter-binding-like pr...    57   2e-06

>ref|XP_003574825.1| PREDICTED: squamosa promoter-binding-like protein 16-like
           [Brachypodium distachyon]
          Length = 425

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 53/137 (38%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
 Frame = -1

Query: 410 GKQFAFLQEGKVCLDRTAT-EPSMRQPFLKIFCSAEXXXXXSNIKMFSGGLTQXXXXXXX 234
           G++F FLQEG++      T EPS+ QP  +   +A       + KMFS GLT        
Sbjct: 262 GRRFPFLQEGEINFATGVTLEPSVCQPHPR---TAAPPDSSGSSKMFSDGLTPVLDSDCA 318

Query: 233 XXXXXSPTQTSSIHVGHMLPANR---VPMCQPLVSSFTYSGNDRFAGSQALRG-VPPTAS 66
                +P  +S I VG M+   +   +P+ QPLVSS  +S +  FA SQA  G VPPT  
Sbjct: 319 LSLLSAPANSSGIDVGRMVQVQQNEHIPIAQPLVSSLQFSSSSWFARSQAATGAVPPTGF 378

Query: 65  SCSGVKDEQTGGVAVSD 15
           SC  V++EQ   V  SD
Sbjct: 379 SCPVVENEQLNTVLSSD 395


>gb|AGI62055.1| SQUAMOSA promoter-binding-like 7 [Erycina pusilla]
          Length = 395

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 52/135 (38%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
 Frame = -1

Query: 410 GKQFAFLQEGKVCLDRTATEPSMRQPFLKIFCSAEXXXXXSNIKMFSGGLTQXXXXXXXX 231
           GK+F+FL       D  A E ++    +K   ++      S I +FS GL          
Sbjct: 237 GKRFSFLH------DAEADEMALGNRSMKTTITSAGESSDSKI-IFSDGLHPVHDSDCAL 289

Query: 230 XXXXSPTQTSSIHVGHMLPANRVPMCQPLVSSFTYSGND-RFAGSQALR-GVPPTASSCS 57
               S  QTS I++GHM+P +R+PM QPL SSF Y  N  R++ SQA    V PT   CS
Sbjct: 290 SLLSSSNQTSGINLGHMMPVDRIPMGQPLSSSFQYGSNQCRYSRSQAASDNVSPTGFLCS 349

Query: 56  GVKDEQTGGVAVSDA 12
           GV++E  G V VS A
Sbjct: 350 GVENEHLGTVLVSGA 364


>dbj|BAK05794.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 394

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
 Frame = -1

Query: 410 GKQFAFLQEGKVCLDR-TATEPSMRQPFLKIFCSAEXXXXXSNIKMFSGGLTQXXXXXXX 234
           G++F FLQEG++      A EP++ QP LK     E      + KMFS GLT        
Sbjct: 231 GRRFPFLQEGEINFATGVALEPAVCQPLLKTVAPPESSSS--SSKMFSDGLTPVLDSDCA 288

Query: 233 XXXXXSPTQTSSIHVGHML-PANRVPMCQPLVSSF-TYSGNDRFAGSQALRG-VPPTASS 63
                +P  +S I VG M+     +P+ QPL S+   +S +  F+ +QA  G V  T  S
Sbjct: 289 LSLLSAPANSSGIDVGQMVQQTEHIPIAQPLFSNLQQFSSSSWFSRTQASTGTVSATGFS 348

Query: 62  CSGVKDEQTGGVAVSDADGL 3
           C  V++EQ   V  SD + L
Sbjct: 349 CPVVENEQLNNVLTSDNNDL 368


>ref|XP_004974002.1| PREDICTED: squamosa promoter-binding-like protein 16-like [Setaria
           italica]
          Length = 444

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 43/132 (32%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
 Frame = -1

Query: 410 GKQFAFLQEGKVCLDRTAT---EPSMRQPFLKIFCSAEXXXXXSNIKMFSGGLTQXXXXX 240
           G++F FLQEG++            S RQP LK     E     +  KMFS GLT+     
Sbjct: 264 GRRFPFLQEGEISFATGVVLEAPASARQPVLKAAAPPESSSGSTGGKMFSDGLTRVLDSD 323

Query: 239 XXXXXXXSPTQTSSIHVGHML-PANRVPMCQPLVSSFTYSGNDRFAGSQALRGVPPTAS- 66
                  +P  +S I V  M+ P   VPM QP+VS   +  +  F+  QA  G    A+ 
Sbjct: 324 CALSLLSAPANSSGIDVSRMVRPTEHVPMAQPVVSGLQFGSSSWFSRPQASAGGAAVAAT 383

Query: 65  ----SCSGVKDE 42
               SC  V+ E
Sbjct: 384 AGFPSCPVVEGE 395


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