BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00021785
         (1733 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17549.3| unnamed protein product [Vitis vinifera]              298   5e-78
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   297   1e-77
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   259   2e-66
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   259   3e-66
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo...   254   1e-64
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...   253   2e-64
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s...   251   9e-64
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s...   249   3e-63
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s...   248   8e-63
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   248   8e-63
ref|XP_006659992.1| PREDICTED: DNA-directed RNA polymerase III s...   247   1e-62
ref|XP_004973130.1| PREDICTED: uncharacterized protein LOC101766...   247   1e-62
gb|EAZ42119.1| hypothetical protein OsJ_26678 [Oryza sativa Japo...   243   2e-61
gb|EAZ06297.1| hypothetical protein OsI_28532 [Oryza sativa Indi...   243   2e-61
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...   239   2e-60
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati...   239   2e-60
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati...   237   1e-59
gb|AFW75283.1| hypothetical protein ZEAMMB73_918312 [Zea mays]        236   2e-59
gb|AFW75282.1| hypothetical protein ZEAMMB73_918312 [Zea mays]        236   2e-59
dbj|BAK01665.1| predicted protein [Hordeum vulgare subsp. vulgare]    235   5e-59

>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  298 bits (763), Expect = 5e-78
 Identities = 188/417 (45%), Positives = 242/417 (58%), Gaps = 18/417 (4%)
 Frame = +2

Query: 8    EPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYP-GXXXXXXXXXXXX 184
            E WV L+YH  +S  + RY QKM++ED+  I F+M P  Y + L P G            
Sbjct: 273  ESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLS 332

Query: 185  LRFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKS 364
             RFLLS+PLEER K  L E   V+ F+AL   APDNS EDVL VL  +A LVQGLW+ KS
Sbjct: 333  RRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKS 392

Query: 365  SLLH---EGEAALYRDYLLYLFSMNPIIPTDKLRMINY--DGLKSILVPLAIERRILKHW 529
            SLL    +G A L RDY+L LFS  P+I   ++ +       LK  L  LA+ER   + W
Sbjct: 393  SLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDW 452

Query: 530  KFKESTDFIFIRNNPEIVDEQEKAWLV---RWNNIIKSLGERMHVPTPSGK--------R 676
            KFKE TD  F++ +P+IV EQ + W     +  +II   G R  V   SGK         
Sbjct: 453  KFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGT 512

Query: 677  AKVVDGA-RGGKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAIS 853
            +   DGA R     PV    + +S ET E LPK L ++F+  K+ S   +   LR LA+S
Sbjct: 513  STKSDGATRATNGTPVRR--TAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVS 570

Query: 854  NSSRPREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRDV 1033
             S+ P+ DPRT     AA  GA AP  EL AI+S+ A  VHGVY+ K+S  S+ + LR V
Sbjct: 571  KSTSPKVDPRTFV---AAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKV 627

Query: 1034 VIDLFRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 1204
            V+DLF GKEPNAKL + +I  AAK  L+K+IT  +YN+V+ ELC+S    WVLKSGD
Sbjct: 628  VVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGD 684


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  297 bits (760), Expect = 1e-77
 Identities = 187/417 (44%), Positives = 242/417 (58%), Gaps = 18/417 (4%)
 Frame = +2

Query: 8    EPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYP-GXXXXXXXXXXXX 184
            + WV L+YH  +S  + RY QKM++ED+  I F+M P  Y + L P G            
Sbjct: 257  QSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLS 316

Query: 185  LRFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKS 364
             RFLLS+PLEER K  L E   V+ F+AL   APDNS EDVL VL  +A LVQGLW+ KS
Sbjct: 317  RRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKS 376

Query: 365  SLLH---EGEAALYRDYLLYLFSMNPIIPTDKLRMINY--DGLKSILVPLAIERRILKHW 529
            SLL    +G A L RDY+L LFS  P+I   ++ +       LK  L  LA+ER   + W
Sbjct: 377  SLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDW 436

Query: 530  KFKESTDFIFIRNNPEIVDEQEKAWLV---RWNNIIKSLGERMHVPTPSGK--------R 676
            KFKE TD  F++ +P+IV EQ + W     +  +II   G R  V   SGK         
Sbjct: 437  KFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGT 496

Query: 677  AKVVDGA-RGGKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAIS 853
            +   DGA R     PV    + +S ET E LPK L ++F+  K+ S   +   LR LA+S
Sbjct: 497  STKSDGATRATNGTPVRR--TAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVS 554

Query: 854  NSSRPREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRDV 1033
             S+ P+ DPRT     AA  GA AP  EL AI+S+ A  VHGVY+ K+S  S+ + LR V
Sbjct: 555  KSTSPKVDPRTFV---AAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKV 611

Query: 1034 VIDLFRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 1204
            V+DLF GKEPNAKL + +I  AAK  L+K+IT  +YN+V+ ELC+S    WVLKSGD
Sbjct: 612  VVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGD 668


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
            sativus]
          Length = 702

 Score =  259 bits (663), Expect = 2e-66
 Identities = 153/416 (36%), Positives = 228/416 (54%), Gaps = 15/416 (3%)
 Frame = +2

Query: 2    NDEPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXX 181
            ++E W+ L+Y+ ++S L+ R+ Q M+S+    + F M P +Y D L PG           
Sbjct: 286  DEECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGP 345

Query: 182  XLRFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITK 361
              ++LLSL LEER+KK L+E   V  F+AL   APD   E+ ++ L  YA LVQGLW+ K
Sbjct: 346  SKKYLLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPK 405

Query: 362  SSLL--HEGEAALYRDYLLYLFSMNPIIPTDKLRMIN--YDGLKSILVPLAIERRILKHW 529
            S  L   +G     RD++L+LFS NP++ + ++ +     D +K  L    +ER   K W
Sbjct: 406  SLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDW 465

Query: 530  KFKESTDFIFIRNNPEIVDEQEKAW--LVRWNNIIKSLGERMHVPTPSGKRAKVVDGARG 703
            KFKE TD +F+ N+  I ++QE+ W  + +    ++S+    H    +GK   V    + 
Sbjct: 466  KFKEKTDRLFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQ 525

Query: 704  GKDKPVNTAMS--------TLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNS 859
                   T  S         +S ET E LPK L K+FQ+ K+ S   +  GLR LA+S S
Sbjct: 526  VSSDQTTTKSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQS 585

Query: 860  SRPREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGS-SDFHRLRDVV 1036
            + P+ D R      AA  G  AP  EL+ I+SQ+A ++HG+Y+L SS    ++  LR VV
Sbjct: 586  TLPKADARMAV---AAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVV 642

Query: 1037 IDLFRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 1204
            I L RG+ P A L K ++  A+K  L + I  ++Y++V+ E+C S   SW LKSGD
Sbjct: 643  IQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGD 698


>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit RPC5-like [Cucumis sativus]
          Length = 702

 Score =  259 bits (661), Expect = 3e-66
 Identities = 153/416 (36%), Positives = 227/416 (54%), Gaps = 15/416 (3%)
 Frame = +2

Query: 2    NDEPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXX 181
            ++E W+ L+Y+ ++S L+ R+ Q M+S+    + F M P +Y D L PG           
Sbjct: 286  DEECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGP 345

Query: 182  XLRFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITK 361
              ++LLSL LEER+KK L+E   V  F+AL   APD   E+ ++ L  YA LVQGLW+ K
Sbjct: 346  SKKYLLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPK 405

Query: 362  SSLL--HEGEAALYRDYLLYLFSMNPIIPTDKLRMIN--YDGLKSILVPLAIERRILKHW 529
            S  L   +G     RD++L+LFS NP++ + ++ +     D +K  L    +ER   K W
Sbjct: 406  SLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDW 465

Query: 530  KFKESTDFIFIRNNPEIVDEQEKAW--LVRWNNIIKSLGERMHVPTPSGKRAKVVDGARG 703
            KFKE TD +F+ N+  I ++QE+ W  + +    ++S+    H    +GK   V    + 
Sbjct: 466  KFKEKTDRLFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQ 525

Query: 704  GKDKPVNTAMS--------TLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNS 859
                   T  S         +S ET E LPK L K+FQ+ K+ S   +  GLR LA+S S
Sbjct: 526  VSSDQTTTKSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQS 585

Query: 860  SRPREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGS-SDFHRLRDVV 1036
            + P+ D R      AA  G  AP  EL  I+SQ+A ++HG+Y+L SS    ++  LR VV
Sbjct: 586  TLPKADARMAV---AAAYGVDAPPDELXKIISQVATEIHGLYVLTSSPEHPEYDPLRKVV 642

Query: 1037 IDLFRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 1204
            I L RG+ P A L K ++  A+K  L + I  ++Y++V+ E+C S   SW LKSGD
Sbjct: 643  IQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGD 698


>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  254 bits (648), Expect = 1e-64
 Identities = 164/413 (39%), Positives = 238/413 (57%), Gaps = 14/413 (3%)
 Frame = +2

Query: 8    EPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXXXL 187
            E WV L+YH   +  + +Y Q+M++E+  +I F M P +Y D L PG             
Sbjct: 291  ECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNNKAQGPSR- 349

Query: 188  RFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKSS 367
            R LLS+PLEERLKK LSE    + F+AL   APD S ED+ +VL  +A LVQGLW+ KSS
Sbjct: 350  RLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSS 409

Query: 368  LL--HEGEAALYRDYLLYLFSMNPIIPTDKLRMIN---YDGLKSILVPLAIERRILKHWK 532
            LL   +   +L RDY+L LFS NPII   ++  ++    + +K  L  LAIER   K WK
Sbjct: 410  LLFPEDPYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWK 469

Query: 533  FKESTDFIFIRNNPEIVDEQEKAWLVRWNNIIKSL------GERMHVPTPSGKRAKVVDG 694
             KE+ D  F +  P+IV  QE+ W    +N+I  +      G     P    K  K ++ 
Sbjct: 470  LKENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNS 529

Query: 695  ARG-GKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPR 871
             +G  +  P   A  T+S ET E +PK L K+FQ  K+ S+  +  GLR LA+S S+ P+
Sbjct: 530  DKGVRRVAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPK 589

Query: 872  EDPRTRAIINAATNGASAPVTELQAIVSQIAVDVH-GVYILKSSGS-SDFHRLRDVVIDL 1045
             D R   ++  A  GA AP  ELQ +VS++AV++H G+++L+SS    ++  LR+VVI+L
Sbjct: 590  ADAR---MVVKAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINL 646

Query: 1046 FRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 1204
             R K    KL K ++  AA   L+++I++++YN+V+ + C+     WVLKSGD
Sbjct: 647  LRVK---GKLKKADVSAAALLSLKREISNNEYNKVMSDFCEYKSSWWVLKSGD 696


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
            gi|550334731|gb|EEE90658.2| hypothetical protein
            POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score =  253 bits (645), Expect = 2e-64
 Identities = 162/414 (39%), Positives = 225/414 (54%), Gaps = 14/414 (3%)
 Frame = +2

Query: 5    DEPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXXX 184
            +E W+ L+YH   S L+ RY Q M++ +   I F M P +Y   L PG            
Sbjct: 272  EESWIPLKYHGSKSDLSSRYLQNMVAPESSTIEFAMNPYDYMSSLCPGISNNNIKLNGPS 331

Query: 185  LRFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKS 364
             R LLSLPLEER+K+   E   ++ F AL  L P++S ED+L VL  Y  LVQGLW+ K+
Sbjct: 332  RRVLLSLPLEERIKRLFLEGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKT 391

Query: 365  SLLH------EGEAALYRDYLLYLFSMNPIIPTDKLRM-INYDGLKSILVPLAIERRILK 523
            SLL       E      RDY+L LFS + ++   +L + +    LKS L   A+ER   K
Sbjct: 392  SLLFPNPKPTEKVKLAARDYILLLFSKSLVVTPSELNVPMKPLILKSFLNIFAVERPSFK 451

Query: 524  HWKFKESTDFIFIRNNPEIVDEQEKAWLVRWNNIIKSLGERMHVPTPSGKRAKVVDGARG 703
             WKFKE+ D +F+   P+IV +QE+AW V   NI  +                     R 
Sbjct: 452  DWKFKENVDTLFVELYPDIVRKQEQAWEVMGKNISAAFD-------------------RA 492

Query: 704  GKDKPVNT---AMSTLSTETLEHLPKILLKIFQDQKI--RSMNSVINGLRGLAISNSSRP 868
            GK    N       T++ ET E L K L K+ Q  K+       +  GLR LAIS S+ P
Sbjct: 493  GKSVSKNVITKPKKTMTDETREALRKALPKVLQTHKVCRYGFQMICQGLRQLAISQSTLP 552

Query: 869  REDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGS-SDFHRL-RDVVID 1042
            + DPR   I  AA +GA AP  ELQ ++S++A ++HG Y+LKSS    DF  L R VVI 
Sbjct: 553  KADPR---IAVAAASGAEAPPEELQEVISEVATNIHGFYVLKSSPEHPDFDPLSRKVVIG 609

Query: 1043 LFRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 1204
            LF  + PNA + K E++ AA+  L+++ ++S+Y +V+ +LC+S   +WVLKSGD
Sbjct: 610  LFLARGPNANIKKSEVQAAARLELKREPSNSEYIKVMTDLCESKGSAWVLKSGD 663


>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
            lycopersicum]
          Length = 669

 Score =  251 bits (640), Expect = 9e-64
 Identities = 152/408 (37%), Positives = 226/408 (55%), Gaps = 9/408 (2%)
 Frame = +2

Query: 8    EPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXXXL 187
            E W+ L+YH   S ++ RY QKM  E+   +PF M P +Y +   PG             
Sbjct: 261  EHWLHLKYHGARSDISARYLQKMSMEEGSPVPFSMSPVDYLNAFCPGRPTDTDRLKILRT 320

Query: 188  RFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKSS 367
            R L  LPLEER++ WL E   ++ F+ALM LAPDNS +++++VL  YA LVQGLW+ KSS
Sbjct: 321  R-LSQLPLEERVRIWLLEGPPIHRFDALMHLAPDNSADEIIRVLQIYAQLVQGLWVPKSS 379

Query: 368  LLH---EGEAALYRDYLLYLFSMNPIIPTDKL--RMINYDGLKSILVPLAIERRILKHWK 532
            L++    G   L R+++LY F+   +I       R          L  LA+ER  L  WK
Sbjct: 380  LVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWK 439

Query: 533  FKESTDFIFIRNNPEIVDEQEKAWLV---RWNNIIKSLGERMHVPTPSGKRAKVVDGARG 703
             KE  D  F     ++V EQ+  W     + N+++     R  +  P  + A +     G
Sbjct: 440  LKEHPDKKFENLYGDVVREQQATWECLGKQINDVLPGGRTRPTMKNPINRNADITALPSG 499

Query: 704  GKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPR 883
             K    +   +++S E  E LPK L ++F+  K+ S   +  GLR L +S S  P+  P 
Sbjct: 500  DKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAP- 558

Query: 884  TRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSS-GSSDFHRLRDVVIDLFRGKE 1060
             R  I A+ +   AP  E+QA+++Q+AV++HGVY+LKSS  +  +  LR +VIDLF  + 
Sbjct: 559  -RKAITASVDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEG 617

Query: 1061 PNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 1204
            P+AKL K  +  AAK +L +DIT+ ++ +V++ELC S K +WVL+SGD
Sbjct: 618  PSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 665


>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Solanum tuberosum]
          Length = 669

 Score =  249 bits (635), Expect = 3e-63
 Identities = 153/416 (36%), Positives = 231/416 (55%), Gaps = 17/416 (4%)
 Frame = +2

Query: 8    EPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXXXL 187
            E W+ L+YH   S ++ RY QKM  E+   +PF M P +Y +  +PG             
Sbjct: 261  EHWLHLKYHGARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRT 320

Query: 188  RFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKSS 367
            R L  LPLEER++ WL E   ++ F+AL  LAPDNS +++++VL  YA LVQGLW+ KSS
Sbjct: 321  R-LSQLPLEERVRTWLLEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSS 379

Query: 368  LLH---EGEAALYRDYLLYLFSMNPIIPTDKL--RMINYDGLKSILVPLAIERRILKHWK 532
            L++    G   L R+++LY F+   +I       R          L  LA+ER  L  WK
Sbjct: 380  LVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWK 439

Query: 533  FKESTDFIFIRNNPEIVDEQEKAWLVRWNNIIKSLGERMHVPTPSGKRAKVVDG------ 694
             KE  D  F     ++V E++  W        + LG++++   P G+    +        
Sbjct: 440  LKEHPDKKFENLYGDVVREKQATW--------ECLGKQINDVLPGGRNRPTMKNPLNPNA 491

Query: 695  ---ARGGKDKPVNTAM--STLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNS 859
               A    DKP ++++  +++S E  E LPK L ++F+  K+ S   +  GLR L +S S
Sbjct: 492  DIPALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKS 551

Query: 860  SRPREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSS-GSSDFHRLRDVV 1036
              P+  P  R  I A+ +   AP  E+QA+++Q+AV++HGVY+LKSS  +  +  LR VV
Sbjct: 552  YPPKGAP--RKAITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVV 609

Query: 1037 IDLFRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 1204
            IDLF  + P+AKL K  +  AAK +L +DIT+ ++ +V++ELC S K +WVL+SGD
Sbjct: 610  IDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 665


>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X2 [Solanum tuberosum]
          Length = 657

 Score =  248 bits (632), Expect = 8e-63
 Identities = 152/414 (36%), Positives = 230/414 (55%), Gaps = 17/414 (4%)
 Frame = +2

Query: 14   WVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXXXLRF 193
            W+ L+YH   S ++ RY QKM  E+   +PF M P +Y +  +PG             R 
Sbjct: 251  WLHLKYHGARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR- 309

Query: 194  LLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKSSLL 373
            L  LPLEER++ WL E   ++ F+AL  LAPDNS +++++VL  YA LVQGLW+ KSSL+
Sbjct: 310  LSQLPLEERVRTWLLEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLV 369

Query: 374  H---EGEAALYRDYLLYLFSMNPIIPTDKL--RMINYDGLKSILVPLAIERRILKHWKFK 538
            +    G   L R+++LY F+   +I       R          L  LA+ER  L  WK K
Sbjct: 370  YGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLK 429

Query: 539  ESTDFIFIRNNPEIVDEQEKAWLVRWNNIIKSLGERMHVPTPSGKRAKVVDG-------- 694
            E  D  F     ++V E++  W        + LG++++   P G+    +          
Sbjct: 430  EHPDKKFENLYGDVVREKQATW--------ECLGKQINDVLPGGRNRPTMKNPLNPNADI 481

Query: 695  -ARGGKDKPVNTAM--STLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSR 865
             A    DKP ++++  +++S E  E LPK L ++F+  K+ S   +  GLR L +S S  
Sbjct: 482  PALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYP 541

Query: 866  PREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSS-GSSDFHRLRDVVID 1042
            P+  P  R  I A+ +   AP  E+QA+++Q+AV++HGVY+LKSS  +  +  LR VVID
Sbjct: 542  PKGAP--RKAITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVID 599

Query: 1043 LFRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLKSGD 1204
            LF  + P+AKL K  +  AAK +L +DIT+ ++ +V++ELC S K +WVL+SGD
Sbjct: 600  LFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 653


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  248 bits (632), Expect = 8e-63
 Identities = 160/405 (39%), Positives = 219/405 (54%), Gaps = 26/405 (6%)
 Frame = +2

Query: 14   WVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXXXLRF 193
            W+SL+YH   S  + RY +KMI+++   + F M P +Y   L P              RF
Sbjct: 270  WISLKYHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRF 329

Query: 194  LLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKSSLL 373
            LLSLPL ERLKK + E   V  F+ L   APD+S EDVLKVL  Y  LVQGLW  KSSLL
Sbjct: 330  LLSLPLAERLKKLILEGPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLL 389

Query: 374  HEGEAAL--YRDYLLYLFSMNPIIPTDKLRMINY-----DGLKSILVPLAIERRILKHWK 532
                 +    RDY+L LFS N +I + +   +N+     + +KS L   A+ER   K WK
Sbjct: 390  FPDANSKQGIRDYVLLLFSKNLVINSSQ---VNFPVKIKEEIKSFLNLFAVERPSFKDWK 446

Query: 533  FKESTDFIFIRNNPEIVDEQEKAW---LVRWNNIIKSLGE---RMHVPTP---------- 664
            FKE TD  FI+  P+IV +QE+AW     R + +    G+   +  +P P          
Sbjct: 447  FKEHTDTTFIKLYPDIVKKQEEAWDNTEKRLSKVFDRSGKASMKNAIPKPPMVHNTVKHL 506

Query: 665  --SGKRAKVVDGARGGKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLR 838
                   K+  G R           +T++ ET E L K L K+FQ  K+ S   +  GLR
Sbjct: 507  DSEKSMPKIASGMR-------RLTKTTITVETREALLKALPKVFQSHKVCSFQLICQGLR 559

Query: 839  GLAISNSSRPREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGS-SDF 1015
             LA+S S+ P+ DPR   I  AA +GA AP  ELQ I+SQ+A ++HG Y+LKSS     +
Sbjct: 560  DLAVSQSTLPKADPR---IAVAAASGADAPPEELQEIISQVATNIHGFYVLKSSPEHPQY 616

Query: 1016 HRLRDVVIDLFRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQV 1150
              LR V+IDL   + PNAKL K E+  AA+   ++D+T+ +YN++
Sbjct: 617  DELRKVIIDLLLARGPNAKLKKAEVFEAARLAFKRDVTNIEYNKL 661


>ref|XP_006659992.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Oryza
            brachyantha]
          Length = 682

 Score =  247 bits (630), Expect = 1e-62
 Identities = 158/405 (39%), Positives = 223/405 (55%), Gaps = 5/405 (1%)
 Frame = +2

Query: 8    EPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXXX- 184
            EPW+SL Y P  S++  +YH +M+S +   I F M  S+Y   L PG             
Sbjct: 282  EPWISLTYQPAGSNIASKYHAEMVSNEGGPIDFTMNTSDYLMSLCPGGSTGSKGVNRSHA 341

Query: 185  LRFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKS 364
            +R +L LPLEERLKKW +EVSQVN F+ALM LA   S++D+LKVL  YADLV GLW+ KS
Sbjct: 342  IREMLKLPLEERLKKWFTEVSQVNQFDALMHLAQTYSEDDLLKVLPVYADLVHGLWVCKS 401

Query: 365  SLLHEGEAALYRDYLLYLFSMNPIIP---TDKLRMINYDGLKSILVPLAIERRILKHWKF 535
            SLL +   A  RD +L  F+    IP    D+L  ++ +  K +L PL   R  L+ +KF
Sbjct: 402  SLLFDDGYACKRDRILLEFTKKDSIPLKDVDRLIRVDDERRKILLPPLCKRREKLQDYKF 461

Query: 536  KESTDFIFIRNNPEIVDEQEKAWLVRWNNIIKSLGERMHVPTPSGKRAKVVDGARGGKDK 715
                D  FI+  P IV EQ+ AW VR   +  S     H      K +   +    G D 
Sbjct: 462  ILPVDSSFIKRYPHIVKEQDHAWSVREITMRDSQETSSHTEARKTKNSAKSNIPSKGPDP 521

Query: 716  PVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPRTRAI 895
              + A           +  +L  IF   K+RS+ ++   LR LA   +S  ++  + +A+
Sbjct: 522  NTSKAKDGPVQGVENLVQSVLETIFTANKVRSIQAIRRDLRQLAAKYASDRKDGQKLQAL 581

Query: 896  INAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRDVVIDLFRGKEPNAKL 1075
             NAAT+ A+ P+ ELQ  V Q+AV VHGVY+ K+        LR +++ LF  K+PNAKL
Sbjct: 582  SNAATSCAALPLVELQKSVEQVAVHVHGVYVAKTPTKKS---LRHLILKLFHDKDPNAKL 638

Query: 1076 NKQEIRIAAKTRLQKDITDSDYNQVIRELC-DSSKGSWVLKSGDQ 1207
             KQEI + +   L++DI + +Y+QVI E+C  +  G  VLK+GD+
Sbjct: 639  TKQEI-LDSAVILKRDI-EKEYHQVISEICIQTEDGHLVLKNGDE 681


>ref|XP_004973130.1| PREDICTED: uncharacterized protein LOC101766969 [Setaria italica]
          Length = 449

 Score =  247 bits (630), Expect = 1e-62
 Identities = 163/407 (40%), Positives = 233/407 (57%), Gaps = 5/407 (1%)
 Frame = +2

Query: 2    NDEPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXX 181
            + EPW+SL Y P  S+++ +YH KMIS +   I F M+ S+Y   L PG           
Sbjct: 47   DSEPWISLTYQPTGSNISTKYHDKMISNEGGPIDFTMRNSDYVMSLCPGASTSSRHINKC 106

Query: 182  X-LRFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWIT 358
              +R +L LPLEERLKKW +EVS+VN F+AL  LAP  S+E++LKVL  YA LV+GLW+ 
Sbjct: 107  QAIREMLLLPLEERLKKWFTEVSEVNQFDALKHLAPTYSEEEILKVLPEYAYLVRGLWVC 166

Query: 359  KSSLLHEGEAALYRDYLLYLFSMNPIIPTDKL-RMINYDG--LKSILVPLAIERRILKHW 529
            KSSLL +   A  RD +L  F+    IP+D L   I  D    K IL PL   R ILK +
Sbjct: 167  KSSLLFDDGYASKRDRVLLEFTKMESIPSDTLDAWIRLDDPKRKRILFPLCKRRGILKDY 226

Query: 530  KFKESTDFIFIRNNPEIVDEQEKAWLVRWNNIIKSLGERMHVPTPSGKRAKVVDGARGGK 709
            KF  S D  F++  P IV+EQE AW  R   + +S      VP   GK +   + A  G 
Sbjct: 227  KF-ISADLSFLKRYPHIVNEQECAWSAREMILHESPKMCSTVPR-KGKNSTRPNVASKGP 284

Query: 710  DKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPRTR 889
                +      +  + + +  +L  +F   K+RSM +V+  LR LA   +S  ++  + +
Sbjct: 285  HPNTSKGRDGPAQGSDDLVQSVLGTVFTANKVRSMQAVVRDLRQLAAKYASNRKDVSKFQ 344

Query: 890  AIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRDVVIDLFRGKEPNA 1069
            A+ +AA   AS P  +L++ +  +AVDVH V++ K         LR+V+I LFR KEPNA
Sbjct: 345  ALSDAAKYCASLPHDKLKSSILLVAVDVHDVFVAKHENKL---ALRNVLILLFRKKEPNA 401

Query: 1070 KLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSK-GSWVLKSGDQ 1207
             L KQEI  AA   +++++TD +Y+QV+ E+C S++ G  VLK+GD+
Sbjct: 402  TLTKQEILAAAAKIIKREVTDREYHQVVTEICISTEDGHLVLKNGDE 448


>gb|EAZ42119.1| hypothetical protein OsJ_26678 [Oryza sativa Japonica Group]
          Length = 673

 Score =  243 bits (619), Expect = 2e-61
 Identities = 158/392 (40%), Positives = 213/392 (54%), Gaps = 8/392 (2%)
 Frame = +2

Query: 8    EPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXXX- 184
            EPW+SL Y    S++  +YH +M+S+D   I F M  S+Y   L PG             
Sbjct: 275  EPWISLTYQQAGSNVARKYHAEMVSDDGGPIDFTMSTSDYVMSLCPGGSTNSRDKNKSHA 334

Query: 185  LRFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKS 364
            +R +L LPLEERLKKW +EVSQVN F+ALM LAP  S++DVLKVL  YADLV+GLW+ KS
Sbjct: 335  IREMLKLPLEERLKKWFTEVSQVNRFDALMHLAPLYSEDDVLKVLPVYADLVRGLWVCKS 394

Query: 365  SLLHEGEAALYRDYLLYLFSMNPIIPTDKLRMINYDGL-----KSILVPLAIERRILKHW 529
            SLL +   A  RD +L  F     IP   +  I    L     K  L PL   R  L+  
Sbjct: 395  SLLFDDGYAWKRDRILLEFRKKDSIPLKDIHRIIKVKLDDNLKKKFLYPLCKIRAKLEDC 454

Query: 530  KFKESTDFIFIRNNPEIVDEQEKAWLVRWNNIIKSLGERMHVPTPSGKRAKVVDGARGGK 709
            KF    D  FIR  P IV EQ+ AW VR   + +S     +      K     +    G 
Sbjct: 455  KFVLPVDSSFIRRYPHIVKEQDHAWSVRETTMRESQETSSNTEARKTKNTTKSNIPSKGP 514

Query: 710  DKPVNTAMS--TLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPR 883
            D  +N A        E L H   +L  IF   K+RS+ ++   LR LA   +S  ++ P+
Sbjct: 515  DPNMNKARDGPVQGNENLVH--SVLDTIFTANKVRSIQAIRRDLRQLAAKYASDRKDGPK 572

Query: 884  TRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRDVVIDLFRGKEP 1063
             +A+ NAATN AS P+ +LQ  ++Q+AV VHGVY+ K +  +     R+++I LFR K+P
Sbjct: 573  LQALSNAATNCASFPLVDLQKSLNQVAVPVHGVYVAKPAKPNS---PRNILIKLFRDKDP 629

Query: 1064 NAKLNKQEIRIAAKTRLQKDITDSDYNQVIRE 1159
            ++KL KQEI   A   L+K + + DY+QV RE
Sbjct: 630  DSKLTKQEILDCAANHLKKGLNEKDYHQVWRE 661


>gb|EAZ06297.1| hypothetical protein OsI_28532 [Oryza sativa Indica Group]
          Length = 673

 Score =  243 bits (619), Expect = 2e-61
 Identities = 158/392 (40%), Positives = 213/392 (54%), Gaps = 8/392 (2%)
 Frame = +2

Query: 8    EPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXXX- 184
            EPW+SL Y    S++  +YH +M+S+D   I F M  S+Y   L PG             
Sbjct: 275  EPWISLTYQQAGSNVARKYHAEMVSDDGGPIDFTMSTSDYVMSLCPGGSTNSRDKNKSHA 334

Query: 185  LRFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKS 364
            +R +L LPLEERLKKW +EVSQVN F+ALM LAP  S++DVLKVL  YADLV+GLW+ KS
Sbjct: 335  IREMLKLPLEERLKKWFTEVSQVNRFDALMHLAPLYSEDDVLKVLPVYADLVRGLWVCKS 394

Query: 365  SLLHEGEAALYRDYLLYLFSMNPIIPTDKLRMINYDGL-----KSILVPLAIERRILKHW 529
            SLL +   A  RD +L  F     IP   +  I    L     K  L PL   R  L+  
Sbjct: 395  SLLFDDGYAWKRDRILLEFRKKDSIPLKDIHRIIKVKLDDNLKKKFLYPLCKIRAKLEDC 454

Query: 530  KFKESTDFIFIRNNPEIVDEQEKAWLVRWNNIIKSLGERMHVPTPSGKRAKVVDGARGGK 709
            KF    D  FIR  P IV EQ+ AW VR   + +S     +      K     +    G 
Sbjct: 455  KFVLPVDSSFIRRYPHIVKEQDHAWSVRETTMRESQETSSNTEARKTKNTTKSNIPSKGP 514

Query: 710  DKPVNTAMS--TLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPR 883
            D  +N A        E L H   +L  IF   K+RS+ ++   LR LA   +S  ++ P+
Sbjct: 515  DPNMNKARDGPVQGNENLVH--SVLDTIFTANKVRSIQAIRRDLRQLAAKYASDRKDGPK 572

Query: 884  TRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRDVVIDLFRGKEP 1063
             +A+ NAATN AS P+ +LQ  ++Q+AV VHGVY+ K +  +     R+++I LFR K+P
Sbjct: 573  LQALSNAATNCASFPLVDLQKSLNQVAVPVHGVYVAKPAKPNS---PRNILIKLFRDKDP 629

Query: 1064 NAKLNKQEIRIAAKTRLQKDITDSDYNQVIRE 1159
            ++KL KQEI   A   L+K + + DY+QV RE
Sbjct: 630  DSKLTKQEILDCAANHLKKGLNEKDYHQVWRE 661


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC5-like [Citrus sinensis]
            gi|557527707|gb|ESR38957.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score =  239 bits (611), Expect = 2e-60
 Identities = 148/411 (36%), Positives = 220/411 (53%), Gaps = 14/411 (3%)
 Frame = +2

Query: 5    DEPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXXX 184
            +E WV L+YH   S  + RY Q+M+ E++  I F M P +Y   L PG            
Sbjct: 279  EECWVPLKYHGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPS 338

Query: 185  LRFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKS 364
             RFLLS+PLEER KK L E   V  F+ LM  AP+++ EDV+ VL     LVQGLW  +S
Sbjct: 339  RRFLLSMPLEERFKKLLCEGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRS 398

Query: 365  SLLHEGEA--ALYRDYLLYLFSMNPIIPTDKLRMINY--DGLKSILVPLAIERRILKHWK 532
             LL   +    L RDY+L  FS N ++    L +     D +K  L   A+ER   K WK
Sbjct: 399  PLLFNNDKMKCLARDYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWK 458

Query: 533  FKESTDFIFIRNNPEIVDEQEKAWLV---RWNNIIKSLGER-MHVPTPSGKRA------K 682
            F++ TD  FI+ +P IV +QE+ W     +  ++I  LG+    +   +GK A      K
Sbjct: 459  FRQQTDLSFIKEHPNIVIKQEQVWAAAEKQITDVINKLGKSGSTLRNDAGKSAMVNKHLK 518

Query: 683  VVDGARGGKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSS 862
             ++ + G       T    LS E+ E LPK L K+FQ  K+ S+  +  GLR LAIS S+
Sbjct: 519  AINSSNGPSG--ALTGNKNLSNESREALPKALQKLFQIHKVCSLPLIKQGLRDLAISQST 576

Query: 863  RPREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRDVVID 1042
             P+ D R   +     + +     E   ++SQ+A ++HG Y+ KSS       LR VV D
Sbjct: 577  LPKADARMTVLAAEIVDSSFVDTQEFAEVISQVATNIHGFYVSKSSEDPQHGPLRKVVTD 636

Query: 1043 LFRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSKGSWVLK 1195
            L     P+AKL K ++  AA+  L+++I++++Y++V+ ++C+S   +W+LK
Sbjct: 637  LLLAGGPDAKLKKADVVEAARHVLKREISNAEYSKVMSDICESKGSAWILK 687


>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
            [Theobroma cacao]
          Length = 736

 Score =  239 bits (611), Expect = 2e-60
 Identities = 165/449 (36%), Positives = 237/449 (52%), Gaps = 50/449 (11%)
 Frame = +2

Query: 8    EPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXXXL 187
            E WV L+YH   +  + +Y Q+M++E+  +I F M P +Y D L PG             
Sbjct: 291  ECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNNKAQGPSR- 349

Query: 188  RFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKSS 367
            R LLS+PLEERLKK LSE    + F+AL   APD S ED+ +VL  +A LVQGLW+ KSS
Sbjct: 350  RLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSS 409

Query: 368  LL--HEGEAALYRDYLLYLFSMNPIIPTDKLRMIN---YDGLKSILVPLAIERRILKHWK 532
            LL   +   +L RDY+L LFS NPII   ++  ++    + +K  L  LAIER   K WK
Sbjct: 410  LLFPEDPYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWK 469

Query: 533  FKESTDFIFIRNNPEIVDEQEKAWLVRWNNIIKSL------GERMHVPTPSGKRAKVVDG 694
             KE+ D  F +  P+IV  QE+ W    +N+I  +      G     P    K  K ++ 
Sbjct: 470  LKENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNS 529

Query: 695  ARG-GKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPR 871
             +G  +  P   A  T+S ET E +PK L K+FQ  K+ S+  +  GLR LA+S S+ P+
Sbjct: 530  DKGVRRVAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPK 589

Query: 872  EDPRTRAIINAATNGASAPVTELQAIVSQIAVDVH-GVYILKSS---------------- 1000
             D R   ++  A  GA AP  ELQ +VS++AV++H G+++L+SS                
Sbjct: 590  ADAR---MVVKAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLRLHKYVQ 646

Query: 1001 ---------------------GSSDFHRLRDVVIDLFRGKEPNAKLNKQEIRIAAKTRLQ 1117
                                  S  F   R+VVI+L R K    KL K ++  AA   L+
Sbjct: 647  LVFKWEEMFMVSMFFLQNPSFSSELFFPCREVVINLLRVK---GKLKKADVSAAALLSLK 703

Query: 1118 KDITDSDYNQVIRELCDSSKGSWVLKSGD 1204
            ++I++++YN+V+ + C+     WVLKSGD
Sbjct: 704  REISNNEYNKVMSDFCEYKSSWWVLKSGD 732


>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
            [Theobroma cacao]
          Length = 588

 Score =  237 bits (605), Expect = 1e-59
 Identities = 156/399 (39%), Positives = 229/399 (57%), Gaps = 14/399 (3%)
 Frame = +2

Query: 8    EPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXXXL 187
            E WV L+YH   +  + +Y Q+M++E+  +I F M P +Y D L PG             
Sbjct: 194  ECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNNKAQGPSR- 252

Query: 188  RFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKSS 367
            R LLS+PLEERLKK LSE    + F+AL   APD S ED+ +VL  +A LVQGLW+ KSS
Sbjct: 253  RLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSS 312

Query: 368  LL--HEGEAALYRDYLLYLFSMNPIIPTDKLRMIN---YDGLKSILVPLAIERRILKHWK 532
            LL   +   +L RDY+L LFS NPII   ++  ++    + +K  L  LAIER   K WK
Sbjct: 313  LLFPEDPYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWK 372

Query: 533  FKESTDFIFIRNNPEIVDEQEKAWLVRWNNIIKSL------GERMHVPTPSGKRAKVVDG 694
             KE+ D  F +  P+IV  QE+ W    +N+I  +      G     P    K  K ++ 
Sbjct: 373  LKENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNS 432

Query: 695  ARG-GKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPR 871
             +G  +  P   A  T+S ET E +PK L K+FQ  K+ S+  +  GLR LA+S S+ P+
Sbjct: 433  DKGVRRVAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPK 492

Query: 872  EDPRTRAIINAATNGASAPVTELQAIVSQIAVDVH-GVYILKSSGS-SDFHRLRDVVIDL 1045
             D R   ++  A  GA AP  ELQ +VS++AV++H G+++L+SS    ++  LR+VVI+L
Sbjct: 493  ADAR---MVVKAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINL 549

Query: 1046 FRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIREL 1162
             R K    KL K ++  AA   L+++I++++YN+ +R +
Sbjct: 550  LRVK---GKLKKADVSAAALLSLKREISNNEYNKALRNM 585


>gb|AFW75283.1| hypothetical protein ZEAMMB73_918312 [Zea mays]
          Length = 677

 Score =  236 bits (602), Expect = 2e-59
 Identities = 164/423 (38%), Positives = 228/423 (53%), Gaps = 21/423 (4%)
 Frame = +2

Query: 2    NDEPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXX 181
            + EPW+SL Y P  S+   +YH KMI+ +   I F M  S Y   L PG           
Sbjct: 273  DSEPWISLIYQPAGSNTATKYHDKMIANEGVPIDFTMSSSCYLTSLCPGASTSRKRINKF 332

Query: 182  X-LRFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWIT 358
              +R +L LPLEERLKKW +EVS VN F+AL DLAP  S+ ++LK+L   A LV+GLW+ 
Sbjct: 333  QAIREMLLLPLEERLKKWFTEVSGVNRFDALKDLAPTCSEVEILKMLPECAYLVRGLWVC 392

Query: 359  KSSLLHEGEAALYRDYLLYLFSMNPIIPTDKLR-MINYDGLKS----ILVPLAIERRILK 523
            KSSLL +G  +   D +L  F+    +P++ L   IN  G ++    IL PL   R+ILK
Sbjct: 393  KSSLLFDGVYSGPMDRILLEFTKRDPVPSNILEPFINLIGNRAMRDWILSPLCKRRQILK 452

Query: 524  HWKFKESTDFIFIRNNPEIVDEQEKAWLVRWNNIIKSL------------GERMHVPT-- 661
              KF  S D  FI+  P IV+EQE AW  R   + +SL              R +V +  
Sbjct: 453  DHKF-ISADLSFIKRYPHIVNEQECAWSARETTLRESLEMSTTLAKKTMNSTRPNVASKG 511

Query: 662  PSGKRAKVVDGARGGKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRG 841
            P    +K  DG   G D   + A S L T            +F   K+RSM +V+  LR 
Sbjct: 512  PHSNMSKGRDGPSQGSD---DLARSVLGT------------VFTANKVRSMQAVVRDLRQ 556

Query: 842  LAISNSSRPREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHR 1021
            LA   +S  ++  + +A+ NAA N AS P  EL   +  +AV VH V++ K     D   
Sbjct: 557  LAAKYASNRKDGSKLQALCNAAKNCASLPHDELNRKIHLVAVPVHSVFVAK---HEDKRA 613

Query: 1022 LRDVVIDLFRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSK-GSWVLKS 1198
            LR++ I LFR KEPN  L KQE+  AA   ++++ITD +Y+QV+ E+C S++ G  +LK+
Sbjct: 614  LRNIFILLFRHKEPNGTLTKQEVVAAAAKHIKREITDREYHQVVTEICISTEDGHLLLKN 673

Query: 1199 GDQ 1207
            GD+
Sbjct: 674  GDE 676


>gb|AFW75282.1| hypothetical protein ZEAMMB73_918312 [Zea mays]
          Length = 618

 Score =  236 bits (602), Expect = 2e-59
 Identities = 164/423 (38%), Positives = 228/423 (53%), Gaps = 21/423 (4%)
 Frame = +2

Query: 2    NDEPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXX 181
            + EPW+SL Y P  S+   +YH KMI+ +   I F M  S Y   L PG           
Sbjct: 214  DSEPWISLIYQPAGSNTATKYHDKMIANEGVPIDFTMSSSCYLTSLCPGASTSRKRINKF 273

Query: 182  X-LRFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWIT 358
              +R +L LPLEERLKKW +EVS VN F+AL DLAP  S+ ++LK+L   A LV+GLW+ 
Sbjct: 274  QAIREMLLLPLEERLKKWFTEVSGVNRFDALKDLAPTCSEVEILKMLPECAYLVRGLWVC 333

Query: 359  KSSLLHEGEAALYRDYLLYLFSMNPIIPTDKLR-MINYDGLKS----ILVPLAIERRILK 523
            KSSLL +G  +   D +L  F+    +P++ L   IN  G ++    IL PL   R+ILK
Sbjct: 334  KSSLLFDGVYSGPMDRILLEFTKRDPVPSNILEPFINLIGNRAMRDWILSPLCKRRQILK 393

Query: 524  HWKFKESTDFIFIRNNPEIVDEQEKAWLVRWNNIIKSL------------GERMHVPT-- 661
              KF  S D  FI+  P IV+EQE AW  R   + +SL              R +V +  
Sbjct: 394  DHKF-ISADLSFIKRYPHIVNEQECAWSARETTLRESLEMSTTLAKKTMNSTRPNVASKG 452

Query: 662  PSGKRAKVVDGARGGKDKPVNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRG 841
            P    +K  DG   G D   + A S L T            +F   K+RSM +V+  LR 
Sbjct: 453  PHSNMSKGRDGPSQGSD---DLARSVLGT------------VFTANKVRSMQAVVRDLRQ 497

Query: 842  LAISNSSRPREDPRTRAIINAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHR 1021
            LA   +S  ++  + +A+ NAA N AS P  EL   +  +AV VH V++ K     D   
Sbjct: 498  LAAKYASNRKDGSKLQALCNAAKNCASLPHDELNRKIHLVAVPVHSVFVAK---HEDKRA 554

Query: 1022 LRDVVIDLFRGKEPNAKLNKQEIRIAAKTRLQKDITDSDYNQVIRELCDSSK-GSWVLKS 1198
            LR++ I LFR KEPN  L KQE+  AA   ++++ITD +Y+QV+ E+C S++ G  +LK+
Sbjct: 555  LRNIFILLFRHKEPNGTLTKQEVVAAAAKHIKREITDREYHQVVTEICISTEDGHLLLKN 614

Query: 1199 GDQ 1207
            GD+
Sbjct: 615  GDE 617


>dbj|BAK01665.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 677

 Score =  235 bits (599), Expect = 5e-59
 Identities = 147/403 (36%), Positives = 223/403 (55%), Gaps = 4/403 (0%)
 Frame = +2

Query: 8    EPWVSLEYHPIDSHLTERYHQKMISEDHHQIPFMMKPSNYADLLYPGXXXXXXXXXXXX- 184
            EPW+SL Y P  S +  +Y+ +M++ +   I F M   +YA  L PG             
Sbjct: 276  EPWISLTYEPAGSDVASKYYAEMVASEGRPIDFTMSTQDYAVSLCPGGPTGSKNINRCQA 335

Query: 185  LRFLLSLPLEERLKKWLSEVSQVNNFNALMDLAPDNSKEDVLKVLLHYADLVQGLWITKS 364
            +R +LSLPLEERLKKW +EVSQV+ F ALM LAPD S+EDVL++L  YADLV+GLW+ +S
Sbjct: 336  IREMLSLPLEERLKKWFTEVSQVSQFVALMHLAPDCSEEDVLEILPVYADLVRGLWVCRS 395

Query: 365  SLLHEGEAALYRDYLLYLFSMNPIIPTDKL-RMINYDGLKS-ILVPLAIERRILKHWKFK 538
            SLL++   A  RD ++  F+    IP   + R+I  +  ++ IL PL   R  L+ +KF 
Sbjct: 396  SLLYDDGLASKRDQIMLEFTKMESIPVKYVERLIRDERTRNMILNPLGKRREKLQDYKFI 455

Query: 539  ESTDFIFIRNNPEIVDEQEKAWLVRWNNIIKSLGERMHVPTPSGKRAKVVDGARGGKDKP 718
             + D  FI+  P IV EQE AW VR   ++  L  R        K +   +    G D  
Sbjct: 456  VAADSSFIKRYPHIVKEQENAWSVRAATMLDPLETRSATEQRKTKNSARSNIPVKGPDTV 515

Query: 719  VNTAMSTLSTETLEHLPKILLKIFQDQKIRSMNSVINGLRGLAISNSSRPREDPRTRAII 898
            +  A   L   +  H+  +L  +F   K+RS  +V+  LR LA+  +S  +++ R +A+ 
Sbjct: 516  MGKAKDGLVQGSENHVRSVLDSVFTANKVRSFPAVVRDLRHLAVKYASNKKDEARFQALS 575

Query: 899  NAATNGASAPVTELQAIVSQIAVDVHGVYILKSSGSSDFHRLRDVVIDLFRGKEPNAKLN 1078
            NAA    S    EL A +  +AV VH +Y+ K+   +    +R+ +I LFRG+  N  + 
Sbjct: 576  NAAQTCVSLSRKELDASIRLVAVPVHDLYVQKTEEKAS---VRNCLIMLFRGRASNGTVK 632

Query: 1079 KQEIRIAAKTRLQKDITDSDYNQVIRELCDSSK-GSWVLKSGD 1204
            KQE+       L++ I++ +Y+Q + E+C S++ G  VLK+G+
Sbjct: 633  KQEVIDCTLKLLKRKISEKEYHQAVTEICFSNEDGHLVLKNGE 675