BLASTX nr result

ID: Zingiber23_contig00021674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00021674
         (549 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280155.2| PREDICTED: zinc finger protein NUTCRACKER is...    58   2e-06
emb|CAN79105.1| hypothetical protein VITISV_006257 [Vitis vinifera]    58   2e-06

>ref|XP_002280155.2| PREDICTED: zinc finger protein NUTCRACKER isoform 2 [Vitis
           vinifera]
          Length = 509

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
 Frame = -3

Query: 514 ASTDIGGRGTAPTHLLEDMMMNSNPLCXXXXXXXXXXXFEDAFGGMIGSKREGSSSYM-- 341
           A+T  GG   +P+ LL+DMM + +               EDAFGGM+ S++ G++ +   
Sbjct: 390 AATGPGGGAPSPSLLLQDMMTSLSSATGFDSSSF-----EDAFGGMLNSRKNGNNLHQTL 444

Query: 340 -EGMVRTQGNNIEGGGRAGNDGITRDFLGLRA 248
                 T        G AGNDG+TRDFLGLRA
Sbjct: 445 PSKSTTTTATTHHSSGGAGNDGLTRDFLGLRA 476


>emb|CAN79105.1| hypothetical protein VITISV_006257 [Vitis vinifera]
          Length = 532

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
 Frame = -3

Query: 514 ASTDIGGRGTAPTHLLEDMMMNSNPLCXXXXXXXXXXXFEDAFGGMIGSKREGSSSYM-- 341
           A+T  GG   +P+ LL+DMM + +               EDAFGGM+ S++ G++ +   
Sbjct: 413 AATGPGGGAPSPSLLLQDMMTSLSSATGFDSSSF-----EDAFGGMLNSRKNGNNLHQTL 467

Query: 340 -EGMVRTQGNNIEGGGRAGNDGITRDFLGLRA 248
                 T        G AGNDG+TRDFLGLRA
Sbjct: 468 PSKSTTTTATTHHSSGGAGNDGLTRDFLGLRA 499


Top