BLASTX nr result
ID: Zingiber23_contig00021644
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber23_contig00021644 (658 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_008854652.1| hypothetical chloroplast RF19 [Curcuma rosco... 409 e-112 ref|YP_007475762.1| hypothetical chloroplast RF19 [Zingiber spec... 409 e-112 gb|AGE93428.1| hypothetical chloroplast RF19 [Alpinia zerumbet] 318 1e-84 ref|YP_007475677.1| hypothetical chloroplast RF19 [Heliconia col... 296 3e-78 gb|AHA12982.1| hypothetical chloroplast RF19 [Monocostus uniflorus] 291 2e-76 gb|AHA13240.1| hypothetical chloroplast RF19 [Thaumatococcus dan... 280 4e-73 gb|AHA12896.1| hypothetical chloroplast RF19 [Maranta leuconeura] 270 4e-70 ref|YP_008854483.1| hypothetical chloroplast RF19 [Musa textilis... 255 7e-66 ref|YP_007475933.1| hypothetical chloroplast RF19 [Calamus caryo... 255 9e-66 ref|YP_007476019.1| hypothetical chloroplast RF19 [Bismarckia no... 250 2e-64 emb|CCW72425.1| ycf1 (chloroplast) [Musa acuminata subsp. malacc... 250 3e-64 gb|AGE93256.1| hypothetical chloroplast RF19 [Calectasia narragara] 248 1e-63 ref|YP_007475847.1| hypothetical chloroplast RF19 [Pseudophoenix... 248 1e-63 gb|AFM83351.1| hypothetical chloroplast RF19 (chloroplast) [King... 248 1e-63 ref|YP_006073162.1| hypothetical protein RF1 (chloroplast) [Elae... 248 1e-63 ref|YP_003540991.1| hypothetical chloroplast RF1 [Phoenix dactyl... 248 1e-63 ref|YP_008854567.1| hypothetical chloroplast RF19 [Ravenala mada... 246 3e-63 gb|AHA13068.1| hypothetical chloroplast RF19 [Costus pulverulentus] 245 7e-63 ref|YP_007476106.1| hypothetical chloroplast RF19 [Dasypogon bro... 245 7e-63 ref|YP_008578343.1| hypothetical chloroplast RF19 (chloroplast) ... 244 2e-62 >ref|YP_008854652.1| hypothetical chloroplast RF19 [Curcuma roscoeana] gi|557637559|gb|AHA13154.1| hypothetical chloroplast RF19 [Curcuma roscoeana] Length = 1815 Score = 409 bits (1052), Expect = e-112 Identities = 195/209 (93%), Positives = 197/209 (94%) Frame = +3 Query: 30 KEKDFSNPSNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIKY 209 KEKDFSNPSNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIKY Sbjct: 1126 KEKDFSNPSNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIKY 1185 Query: 210 YSITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQ 389 YSITRGIFN PGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQ Sbjct: 1186 YSITRGIFNSKSRYKYKKIKKPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQ 1245 Query: 390 NCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLSHKYIYYG 569 NCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLSHKYIYYG Sbjct: 1246 NCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLSHKYIYYG 1305 Query: 570 NSKDSSIYKPKLQLKRNQKIPYNFNIQKP 656 +SKDSSIYKPKLQLKRNQKIPYNF+IQKP Sbjct: 1306 DSKDSSIYKPKLQLKRNQKIPYNFDIQKP 1334 >ref|YP_007475762.1| hypothetical chloroplast RF19 [Zingiber spectabile] gi|449326242|gb|AGE92827.1| hypothetical chloroplast RF19 [Zingiber spectabile] Length = 1817 Score = 409 bits (1050), Expect = e-112 Identities = 195/208 (93%), Positives = 196/208 (94%) Frame = +3 Query: 30 KEKDFSNPSNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIKY 209 KEKDFSNPSNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIKY Sbjct: 1151 KEKDFSNPSNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIKY 1210 Query: 210 YSITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQ 389 YSITRGIFN PGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQ Sbjct: 1211 YSITRGIFNSKSRYKYKKIKKPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQ 1270 Query: 390 NCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLSHKYIYYG 569 NCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLSHKYIYYG Sbjct: 1271 NCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLSHKYIYYG 1330 Query: 570 NSKDSSIYKPKLQLKRNQKIPYNFNIQK 653 NSKDSSIYKPKLQLKR+QKIPYNFNIQK Sbjct: 1331 NSKDSSIYKPKLQLKRSQKIPYNFNIQK 1358 >gb|AGE93428.1| hypothetical chloroplast RF19 [Alpinia zerumbet] Length = 1795 Score = 318 bits (814), Expect = 1e-84 Identities = 163/211 (77%), Positives = 166/211 (78%), Gaps = 2/211 (0%) Frame = +3 Query: 30 KEKDFSNPSNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIKY 209 KEKD SNPSNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDK KY Sbjct: 1126 KEKDLSNPSNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKNKY 1185 Query: 210 YSITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQ 389 YSITRGI N PGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQ Sbjct: 1186 YSITRGILNSKSRYKYKKIKKPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQ 1245 Query: 390 NCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLSHKYIY-- 563 NCTIHNKESMKFSSYKKEK W K +KQYVYD LSHKYIY Sbjct: 1246 NCTIHNKESMKFSSYKKEK----------------W-----KKQKQYVYDFLSHKYIYYG 1284 Query: 564 YGNSKDSSIYKPKLQLKRNQKIPYNFNIQKP 656 YG+SKDS I + KLQLKRN KIPYNFN QKP Sbjct: 1285 YGDSKDSCISELKLQLKRNSKIPYNFNTQKP 1315 >ref|YP_007475677.1| hypothetical chloroplast RF19 [Heliconia collinsiana] gi|449326156|gb|AGE92742.1| hypothetical chloroplast RF19 [Heliconia collinsiana] Length = 1782 Score = 296 bits (759), Expect = 3e-78 Identities = 153/219 (69%), Positives = 168/219 (76%), Gaps = 11/219 (5%) Frame = +3 Query: 33 EKDFSNP---------SNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYR--GT 179 +K FSNP SNNSNTYYDLSSLSQAYVFYK+SQTQLLNNHH RSVLQYR GT Sbjct: 1100 KKSFSNPNFANPNTNISNNSNTYYDLSSLSQAYVFYKLSQTQLLNNHHLRSVLQYRDHGT 1159 Query: 180 HPFIKDKIKYYSITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLV 359 +PFIKDKIKYY +TRGIF+ GMNEWKNWLKG+Y +NLSQSKWSRLV Sbjct: 1160 YPFIKDKIKYYCMTRGIFDSKSRHKKINKS--GMNEWKNWLKGHYQFNLSQSKWSRLV-- 1215 Query: 360 AKKWRKKINQNCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYD 539 +KKWR +INQ CTI NKESMK SYKKEKDR IHY KENFY V L+ ++K K KK Y YD Sbjct: 1216 SKKWRNRINQRCTIQNKESMKLYSYKKEKDRLIHYMKENFYAVDLFASRKTKFKKHYRYD 1275 Query: 540 LLSHKYIYYGNSKDSSIYKPKLQLKRNQKIPYNFNIQKP 656 LLSH+YI G+SKDS IY PKLQL RNQ+IPYNFN KP Sbjct: 1276 LLSHEYINCGDSKDSYIYGPKLQLNRNQEIPYNFNTLKP 1314 >gb|AHA12982.1| hypothetical chloroplast RF19 [Monocostus uniflorus] Length = 1842 Score = 291 bits (744), Expect = 2e-76 Identities = 148/210 (70%), Positives = 165/210 (78%), Gaps = 2/210 (0%) Frame = +3 Query: 33 EKDFSNP--SNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIK 206 +K FSNP SNNSNTYYDLS LSQAYVFYK+SQTQLLNNHH +SVLQYRGT+PFIKDKIK Sbjct: 1173 KKSFSNPNISNNSNTYYDLSFLSQAYVFYKLSQTQLLNNHHLKSVLQYRGTYPFIKDKIK 1232 Query: 207 YYSITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKIN 386 YY I RGIF+ GMNEWKNWLK +Y YNLS+SKWSRLV +KW+ +IN Sbjct: 1233 YYCIARGIFDSKSMHKKIYKS--GMNEWKNWLKSHYPYNLSESKWSRLV--PQKWQNRIN 1288 Query: 387 QNCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLSHKYIYY 566 Q+C I NKES K SYKKEKDR IHY KENFY V L NQKEKLKK Y YD LSH+YI Y Sbjct: 1289 QHCIIQNKESKKLYSYKKEKDRLIHYIKENFYAVDLLTNQKEKLKKHYKYDFLSHEYINY 1348 Query: 567 GNSKDSSIYKPKLQLKRNQKIPYNFNIQKP 656 G+SK+ IY+PKLQLKRNQ+IP NFN +KP Sbjct: 1349 GDSKEFYIYEPKLQLKRNQEIP-NFNTRKP 1377 >gb|AHA13240.1| hypothetical chloroplast RF19 [Thaumatococcus daniellii] Length = 1874 Score = 280 bits (715), Expect = 4e-73 Identities = 147/216 (68%), Positives = 165/216 (76%), Gaps = 8/216 (3%) Frame = +3 Query: 33 EKDFSNP--SNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPF--IKDK 200 +K FSNP SNNSNTYYDLSSLSQAYVFYK+SQTQLLNNHH +SVLQY GT+PF IKDK Sbjct: 1187 KKSFSNPNISNNSNTYYDLSSLSQAYVFYKLSQTQLLNNHHLKSVLQYHGTYPFIKIKDK 1246 Query: 201 IKYYSITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKK 380 +KY+ +T+GIF+ GMNEWKNWLKG+Y YNLSQSKWS LV KKWRK+ Sbjct: 1247 MKYFCMTQGIFD--SKSRHKKINKSGMNEWKNWLKGHYPYNLSQSKWS--PLVPKKWRKR 1302 Query: 381 INQNCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKE----KLKKQYVYDLLS 548 +NQ CTI N+ESMK SYKKEKDR I Y KENFY V L NQK+ KLKK Y YDLLS Sbjct: 1303 LNQRCTIKNQESMKLYSYKKEKDRLIPYIKENFYAVDLLTNQKQKEKFKLKKTYRYDLLS 1362 Query: 549 HKYIYYGNSKDSSIYKPKLQLKRNQKIPYNFNIQKP 656 H+YI Y +SKDS IY PKLQL +NQ+I YNFN KP Sbjct: 1363 HEYINYVDSKDSYIYGPKLQLNKNQEITYNFNTPKP 1398 >gb|AHA12896.1| hypothetical chloroplast RF19 [Maranta leuconeura] Length = 1902 Score = 270 bits (689), Expect = 4e-70 Identities = 140/209 (66%), Positives = 160/209 (76%), Gaps = 4/209 (1%) Frame = +3 Query: 39 DFSNP--SNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIKYY 212 + SNP SNNSN YYDLSSLSQAYVFYK+SQTQLLNNHH +SVL+YRGT+PFIKDKIKY+ Sbjct: 1216 NISNPNISNNSNIYYDLSSLSQAYVFYKLSQTQLLNNHHLKSVLKYRGTYPFIKDKIKYF 1275 Query: 213 SITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQN 392 +T+GIF+ GMNEWKNWLKG+Y YNLSQSKWS LV KKWRK++NQ+ Sbjct: 1276 CMTQGIFD--CKSRHKKINKSGMNEWKNWLKGHYPYNLSQSKWSS--LVPKKWRKRLNQH 1331 Query: 393 CTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKE--KLKKQYVYDLLSHKYIYY 566 TI NK SYKK+KDR I Y KENFY V L+ NQK+ KLKK Y YDLLSH+YI Y Sbjct: 1332 STIKNKNKESRYSYKKKKDRLIPYIKENFYAVDLFTNQKQKLKLKKPYRYDLLSHEYINY 1391 Query: 567 GNSKDSSIYKPKLQLKRNQKIPYNFNIQK 653 +SKDS IY PKLQL +NQ+IPYNFN K Sbjct: 1392 VDSKDSYIYGPKLQLNKNQEIPYNFNTPK 1420 >ref|YP_008854483.1| hypothetical chloroplast RF19 [Musa textilis] gi|557636970|gb|AHA12572.1| hypothetical chloroplast RF19 [Musa textilis] Length = 1901 Score = 255 bits (652), Expect = 7e-66 Identities = 130/194 (67%), Positives = 148/194 (76%), Gaps = 4/194 (2%) Frame = +3 Query: 33 EKDFSNPS--NNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYR--GTHPFIKDK 200 +K FSNP+ N+ NTY+DLSSLSQAYVFYK+SQTQL NNHH RSVLQY GT+PFIKDK Sbjct: 1255 KKSFSNPNIRNDLNTYHDLSSLSQAYVFYKLSQTQLFNNHHLRSVLQYHDHGTYPFIKDK 1314 Query: 201 IKYYSITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKK 380 IKYY +TRGIF+ GMN+WKNWLKG+Y YN S+SKWSRLV KKWR + Sbjct: 1315 IKYYCMTRGIFDSKSRHKKINKS--GMNKWKNWLKGHYQYNFSRSKWSRLV--PKKWRNR 1370 Query: 381 INQNCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLSHKYI 560 +NQ CTI NKESMK SYKKEKDR IHY ENFY V L ++KEKLKK Y YDLLSH+YI Sbjct: 1371 VNQRCTIQNKESMKLYSYKKEKDRLIHYMNENFYAVDLSTSRKEKLKKHYRYDLLSHEYI 1430 Query: 561 YYGNSKDSSIYKPK 602 YG+SKDS KP+ Sbjct: 1431 NYGDSKDSYTLKPE 1444 >ref|YP_007475933.1| hypothetical chloroplast RF19 [Calamus caryotoides] gi|449326415|gb|AGE92998.1| hypothetical chloroplast RF19 [Calamus caryotoides] Length = 1879 Score = 255 bits (651), Expect = 9e-66 Identities = 132/206 (64%), Positives = 152/206 (73%), Gaps = 5/206 (2%) Frame = +3 Query: 54 SNNSNTYY--DLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIKYYSITRG 227 +NNSN YY DLSSLSQAYVFYKISQTQL N +H R VL+Y THPFIKDKIK Y +TRG Sbjct: 1184 NNNSNIYYFYDLSSLSQAYVFYKISQTQLFNKYHLRYVLKYLKTHPFIKDKIKDYCMTRG 1243 Query: 228 IFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQNCTIHN 407 IF+ GMNEWKNWLKG+Y YNLSQ+KWSR LV +KWR +INQ TI N Sbjct: 1244 IFDSKSKQKKIHKF--GMNEWKNWLKGHYQYNLSQTKWSR--LVPQKWRNRINQRSTIQN 1299 Query: 408 KESMKFSSYKKEKDRSIHYKKENFYTV---YLWPNQKEKLKKQYVYDLLSHKYIYYGNSK 578 K+SMKF S+KKEKD+ IHY K+N+Y + L QKEK KK Y YDLLSHKY+ YGN K Sbjct: 1300 KKSMKFDSHKKEKDQLIHYMKQNYYAMAVDSLTSQQKEKFKKHYRYDLLSHKYMNYGNRK 1359 Query: 579 DSSIYKPKLQLKRNQKIPYNFNIQKP 656 DS IY+ LQ+K +Q+IPYNFN KP Sbjct: 1360 DSYIYESTLQVKGDQEIPYNFNTLKP 1385 >ref|YP_007476019.1| hypothetical chloroplast RF19 [Bismarckia nobilis] gi|449326502|gb|AGE93084.1| hypothetical chloroplast RF19 [Bismarckia nobilis] Length = 1852 Score = 250 bits (639), Expect = 2e-64 Identities = 134/216 (62%), Positives = 156/216 (72%), Gaps = 8/216 (3%) Frame = +3 Query: 33 EKDFSNPS---NNSNTYY---DLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIK 194 +K FSN + +NSN YY DLSSLSQAYVFYK+SQTQLLN +H RSVLQY TH FIK Sbjct: 1167 KKSFSNTNISNSNSNIYYYNNDLSSLSQAYVFYKLSQTQLLNKYHLRSVLQYPRTHSFIK 1226 Query: 195 DKIKYYSITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWR 374 DKIK Y +TRGIF+ G NEWKNWLKG+Y YNLSQ+KWSR LV +KWR Sbjct: 1227 DKIKDYCMTRGIFD----SKSKQIYKSGKNEWKNWLKGHYQYNLSQTKWSR--LVPQKWR 1280 Query: 375 KKINQNCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYL--WPNQKEKLKKQYVYDLLS 548 +INQ TI NK SMKF S KKEKD+ IHY K+N+Y + + +QKEKLKK Y Y LLS Sbjct: 1281 NRINQRSTIQNKNSMKFDSNKKEKDQLIHYMKQNYYALAVDSLTSQKEKLKKHYRYYLLS 1340 Query: 549 HKYIYYGNSKDSSIYKPKLQLKRNQKIPYNFNIQKP 656 HKY+ YGN KDS IY+ LQ+K +Q+IPYNFN KP Sbjct: 1341 HKYMNYGNRKDSYIYESTLQVKGDQEIPYNFNTLKP 1376 >emb|CCW72425.1| ycf1 (chloroplast) [Musa acuminata subsp. malaccensis] gi|525312519|emb|CCW72440.1| ycf1 (chloroplast) [Musa acuminata subsp. malaccensis] Length = 1990 Score = 250 bits (638), Expect = 3e-64 Identities = 129/198 (65%), Positives = 146/198 (73%), Gaps = 8/198 (4%) Frame = +3 Query: 33 EKDFSNPS--NNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYR--GTHPFIKDK 200 +K FSNP+ N+ NTY+DLSSLSQAYVFYK+SQTQL NNHH RSVLQY GT+PFIKDK Sbjct: 1252 KKSFSNPNIRNDLNTYHDLSSLSQAYVFYKLSQTQLFNNHHLRSVLQYHDHGTYPFIKDK 1311 Query: 201 IKYYSITRGIFNXXXXXXXXXXXXP----GMNEWKNWLKGNYAYNLSQSKWSRLVLVAKK 368 IKYY +TRGIF+ GMN+WKNWLKG+Y YN S+SKWSRLV KK Sbjct: 1312 IKYYCMTRGIFDSKSRFDSKSRHKKINKSGMNKWKNWLKGHYQYNFSRSKWSRLV--PKK 1369 Query: 369 WRKKINQNCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLS 548 WR ++NQ CTI NKESMK SYKKEKDR IHY ENF V L +QKEK KK Y YDLLS Sbjct: 1370 WRNRVNQRCTIQNKESMKLYSYKKEKDRLIHYMNENFCAVDLSMSQKEKFKKHYRYDLLS 1429 Query: 549 HKYIYYGNSKDSSIYKPK 602 H+YI YG+SKDS KP+ Sbjct: 1430 HEYINYGDSKDSYTLKPE 1447 >gb|AGE93256.1| hypothetical chloroplast RF19 [Calectasia narragara] Length = 1795 Score = 248 bits (632), Expect = 1e-63 Identities = 124/197 (62%), Positives = 146/197 (74%) Frame = +3 Query: 54 SNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIKYYSITRGIF 233 SNNSN YYDL S+SQAYVFY +SQTQLLN +HFRSVLQY T+PF++ KIK Y +T+GIF Sbjct: 1123 SNNSNIYYDLFSVSQAYVFYILSQTQLLNKYHFRSVLQYPETYPFLRKKIKDYCMTQGIF 1182 Query: 234 NXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQNCTIHNKE 413 + GMNEWKNWLK +Y YNLSQ+KWSRLV KKWR ++NQ TI K+ Sbjct: 1183 DCKSRDKKIYKS--GMNEWKNWLKSHYQYNLSQTKWSRLV--RKKWRNRVNQRYTIQKKD 1238 Query: 414 SMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLSHKYIYYGNSKDSSIY 593 S+K SYKKEKD+ IHY K N+Y V +QKEKLKK Y YDLLSHKY+ YG+ KDSSIY Sbjct: 1239 SIKLDSYKKEKDQIIHYTKLNYYLVDSLMSQKEKLKKNYGYDLLSHKYMNYGDVKDSSIY 1298 Query: 594 KPKLQLKRNQKIPYNFN 644 +P Q+ NQKI YNFN Sbjct: 1299 RPTFQVNGNQKISYNFN 1315 >ref|YP_007475847.1| hypothetical chloroplast RF19 [Pseudophoenix vinifera] gi|449326328|gb|AGE92912.1| hypothetical chloroplast RF19 [Pseudophoenix vinifera] Length = 1866 Score = 248 bits (632), Expect = 1e-63 Identities = 132/218 (60%), Positives = 155/218 (71%), Gaps = 10/218 (4%) Frame = +3 Query: 33 EKDFSNPS---NNSNTYY-----DLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPF 188 +K FSN + NNSN YY +LSSLSQAYVFYK+SQTQLLN +H R VLQY TH F Sbjct: 1168 KKSFSNTNIRNNNSNIYYYNNNNNLSSLSQAYVFYKLSQTQLLNKYHLRPVLQYPRTHSF 1227 Query: 189 IKDKIKYYSITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKK 368 IKDK+K Y +TRGIF+ G NEWKNWLKG+Y YNLSQ+KWSR LV +K Sbjct: 1228 IKDKVKDYCMTRGIFD--SKSKQKKIYKSGKNEWKNWLKGHYQYNLSQTKWSR--LVPQK 1283 Query: 369 WRKKINQNCTIHNKESMKFSSYKKEKDRSIHYKKENFY--TVYLWPNQKEKLKKQYVYDL 542 WR +INQ TI NK S+KF S+KKEKD+ IHY K+N+Y +V +QKEK KK Y Y L Sbjct: 1284 WRNRINQRSTIQNKNSIKFDSHKKEKDQLIHYMKQNYYAASVDSLTSQKEKFKKHYRYYL 1343 Query: 543 LSHKYIYYGNSKDSSIYKPKLQLKRNQKIPYNFNIQKP 656 LSHKY+ YGN KDS IY+ LQ+K N+KIPYNFN KP Sbjct: 1344 LSHKYMNYGNRKDSYIYESTLQVKGNKKIPYNFNTLKP 1381 >gb|AFM83351.1| hypothetical chloroplast RF19 (chloroplast) [Kingia australis] Length = 1849 Score = 248 bits (632), Expect = 1e-63 Identities = 123/200 (61%), Positives = 147/200 (73%) Frame = +3 Query: 45 SNPSNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIKYYSITR 224 +N SNNSN YYDLSSLSQ+YVFY +SQTQLLN +HFRSVLQY T+PF++ KIK Y +T+ Sbjct: 1162 TNISNNSNIYYDLSSLSQSYVFYILSQTQLLNKYHFRSVLQYTETYPFLRKKIKDYCMTQ 1221 Query: 225 GIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQNCTIH 404 GIF+ GMNEWKNWLK +Y YNLSQ+KWSRLV +KWR ++NQ CTI Sbjct: 1222 GIFDFKSRDKKIHKS--GMNEWKNWLKNHYQYNLSQTKWSRLV--PQKWRNRMNQRCTIQ 1277 Query: 405 NKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLSHKYIYYGNSKDS 584 KES+K SYKK+KD+ IHY K N+Y V +QKEK KK Y YDLLSHKY+ YGN KDS Sbjct: 1278 KKESIKLDSYKKQKDQIIHYTKPNYYLVDSLMSQKEKFKKHYGYDLLSHKYMNYGNGKDS 1337 Query: 585 SIYKPKLQLKRNQKIPYNFN 644 SIY Q+ N++I YNFN Sbjct: 1338 SIYGSTSQVNGNEEISYNFN 1357 >ref|YP_006073162.1| hypothetical protein RF1 (chloroplast) [Elaeis guineensis] gi|325305764|gb|ADZ10925.1| hypothetical protein RF1 (chloroplast) [Elaeis guineensis] Length = 1829 Score = 248 bits (632), Expect = 1e-63 Identities = 132/219 (60%), Positives = 155/219 (70%), Gaps = 11/219 (5%) Frame = +3 Query: 33 EKDFSNPS---NNSNTYY------DLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHP 185 +K FSN + NNSN YY DLSSLSQAYVFYK+SQTQLLN +H RSVLQY TH Sbjct: 1164 KKSFSNTNISNNNSNIYYYYYYNYDLSSLSQAYVFYKLSQTQLLNKYHLRSVLQYTRTHS 1223 Query: 186 FIKDKIKYYSITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAK 365 FIKDKIK Y +TRGIF+ G NEWKNWLKG+Y YNLSQ+KWSR LV + Sbjct: 1224 FIKDKIKDYCMTRGIFD--SKSKQKKIYKSGKNEWKNWLKGHYQYNLSQTKWSR--LVPQ 1279 Query: 366 KWRKKINQNCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYL--WPNQKEKLKKQYVYD 539 KWR +INQ I NK S+KF S+KKEKD+ IHY K+N+Y + + +QKEK KK Y Y Sbjct: 1280 KWRNRINQRSMIQNKNSIKFDSHKKEKDQLIHYMKQNYYAMAVDSLTSQKEKFKKHYRYY 1339 Query: 540 LLSHKYIYYGNSKDSSIYKPKLQLKRNQKIPYNFNIQKP 656 LLSHKY+ YGN KDS IY+ LQ+K +Q+IPYNFN KP Sbjct: 1340 LLSHKYMNYGNRKDSYIYESTLQVKGDQEIPYNFNTLKP 1378 >ref|YP_003540991.1| hypothetical chloroplast RF1 [Phoenix dactylifera] gi|290790971|gb|ADD63226.1| hypothetical chloroplast RF1 (chloroplast) [Phoenix dactylifera] gi|294620637|gb|ADF28206.1| hypothetical chloroplast RF1 (chloroplast) [Phoenix dactylifera] Length = 1877 Score = 248 bits (632), Expect = 1e-63 Identities = 133/222 (59%), Positives = 155/222 (69%), Gaps = 14/222 (6%) Frame = +3 Query: 33 EKDFSNPS---NNSNTYY---------DLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRG 176 +K F N + NNSN YY DLSSLSQAYVFYK+SQTQLLN +H RSVLQY Sbjct: 1175 KKSFYNTNISNNNSNIYYYSNIYYYNYDLSSLSQAYVFYKLSQTQLLNKYHLRSVLQYPR 1234 Query: 177 THPFIKDKIKYYSITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVL 356 TH FIKDKIK Y +TRGIF+ G NEWKNWLKG+Y YNLSQ+KWSR L Sbjct: 1235 THSFIKDKIKDYCMTRGIFD--SKSKQKKIYKSGKNEWKNWLKGHYQYNLSQTKWSR--L 1290 Query: 357 VAKKWRKKINQNCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYL--WPNQKEKLKKQY 530 V +KWR +INQ TI NK S+KF S+KKEKD+ IHY K+N+Y V + +QKEK KK Y Sbjct: 1291 VPQKWRNRINQRSTIQNKNSIKFDSHKKEKDQLIHYMKQNYYAVVVDSLTSQKEKFKKHY 1350 Query: 531 VYDLLSHKYIYYGNSKDSSIYKPKLQLKRNQKIPYNFNIQKP 656 Y LLSHKY+ YGN KDS IY+ LQ+K +Q+IPYNFN KP Sbjct: 1351 RYYLLSHKYMNYGNRKDSYIYESTLQVKGDQEIPYNFNTLKP 1392 >ref|YP_008854567.1| hypothetical chloroplast RF19 [Ravenala madagascariensis] gi|557637055|gb|AHA12656.1| hypothetical chloroplast RF19 [Ravenala madagascariensis] Length = 1888 Score = 246 bits (629), Expect = 3e-63 Identities = 133/210 (63%), Positives = 149/210 (70%), Gaps = 2/210 (0%) Frame = +3 Query: 33 EKDFSNPSNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIKYY 212 ++ FSNP+ ++ DLSSLSQAYVFYK+SQT+ LNNHH RSVLQY GTHPFIKDKIKYY Sbjct: 1207 KESFSNPNFSNPNISDLSSLSQAYVFYKLSQTKSLNNHHLRSVLQYHGTHPFIKDKIKYY 1266 Query: 213 SITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGN--YAYNLSQSKWSRLVLVAKKWRKKIN 386 +TRGIF+ PGMNEWKNWLK + Y YN SQSKWS+ LV KKWR +I Sbjct: 1267 LMTRGIFD--SKSRHKKINKPGMNEWKNWLKSHYQYQYNFSQSKWSQ--LVPKKWRNRI- 1321 Query: 387 QNCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLSHKYIYY 566 CTI NK+ SYKKEKDR IHY +ENF V L NQKEKLKKQY YDLLSH+YI Y Sbjct: 1322 -RCTIQNKD-----SYKKEKDRLIHYMEENFDAVDL--NQKEKLKKQYKYDLLSHEYINY 1373 Query: 567 GNSKDSSIYKPKLQLKRNQKIPYNFNIQKP 656 IY PKLQL RN +IPYNFN KP Sbjct: 1374 DYGDSKDIYGPKLQLNRNPEIPYNFNTLKP 1403 >gb|AHA13068.1| hypothetical chloroplast RF19 [Costus pulverulentus] Length = 1825 Score = 245 bits (626), Expect = 7e-63 Identities = 134/209 (64%), Positives = 149/209 (71%), Gaps = 2/209 (0%) Frame = +3 Query: 36 KDFSNP--SNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIKY 209 K FSNP SNNSNTYYDLS LSQAYVFYK+SQTQLLNNHH RSVLQYR THPFIKDKIK Sbjct: 1173 KSFSNPNISNNSNTYYDLSFLSQAYVFYKLSQTQLLNNHHLRSVLQYRDTHPFIKDKIKD 1232 Query: 210 YSITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQ 389 Y IT+GIF+ G+NEWKNWLK +Y YNLSQSKWSR LV KKW+ +INQ Sbjct: 1233 YCITQGIFD--SKSMHKKIYKSGINEWKNWLKSHYPYNLSQSKWSR--LVPKKWQNRINQ 1288 Query: 390 NCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLSHKYIYYG 569 +C I NKES+K SYKKE D L NQKEK KK Y YD LSH+YI YG Sbjct: 1289 HCIIQNKESIKLYSYKKEVD--------------LLTNQKEKFKKHYKYDFLSHEYINYG 1334 Query: 570 NSKDSSIYKPKLQLKRNQKIPYNFNIQKP 656 +SK+ IY+PKLQL Q+IP NFN +KP Sbjct: 1335 DSKELYIYEPKLQL---QEIP-NFNTRKP 1359 >ref|YP_007476106.1| hypothetical chloroplast RF19 [Dasypogon bromeliifolius] gi|449326590|gb|AGE93171.1| hypothetical chloroplast RF19 [Dasypogon bromeliifolius] Length = 1844 Score = 245 bits (626), Expect = 7e-63 Identities = 124/200 (62%), Positives = 146/200 (73%) Frame = +3 Query: 45 SNPSNNSNTYYDLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFIKDKIKYYSITR 224 +N SNNSN YYDLSS+SQAYVFY +SQTQLLN +HFRSVLQY T+PF++ KIK Y +T+ Sbjct: 1160 TNISNNSNIYYDLSSVSQAYVFYILSQTQLLNKYHFRSVLQYPETYPFLRKKIKDYCMTQ 1219 Query: 225 GIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKWRKKINQNCTIH 404 GIF+ GMNEWKNWLK +Y YNLSQ+KWSRLV KKWR ++NQ TI Sbjct: 1220 GIFDCKSRDKKIHKS--GMNEWKNWLKSHYQYNLSQTKWSRLV--QKKWRNRMNQRYTIQ 1275 Query: 405 NKESMKFSSYKKEKDRSIHYKKENFYTVYLWPNQKEKLKKQYVYDLLSHKYIYYGNSKDS 584 K+S+K SYKKEKD+ IHY K N+Y V +QKEK KK Y YDLLSHKY+ YG KDS Sbjct: 1276 KKDSIKLDSYKKEKDQIIHYTKLNYYLVDSLMSQKEKFKKHYGYDLLSHKYMNYGGGKDS 1335 Query: 585 SIYKPKLQLKRNQKIPYNFN 644 SIY Q+K NQ+I YNFN Sbjct: 1336 SIYGSTFQVKGNQEISYNFN 1355 >ref|YP_008578343.1| hypothetical chloroplast RF19 (chloroplast) [Cocos nucifera] gi|528748833|gb|AGS43523.1| hypothetical chloroplast RF19 (chloroplast) [Cocos nucifera] Length = 1839 Score = 244 bits (622), Expect = 2e-62 Identities = 130/217 (59%), Positives = 154/217 (70%), Gaps = 9/217 (4%) Frame = +3 Query: 33 EKDFSNPS---NNSNTYY----DLSSLSQAYVFYKISQTQLLNNHHFRSVLQYRGTHPFI 191 +K FSN + N SN YY DLSSLSQAYVFYK+SQTQLLN +H RSVLQY TH FI Sbjct: 1165 KKSFSNTNISNNYSNIYYYYNNDLSSLSQAYVFYKLSQTQLLNKYHLRSVLQYTRTHSFI 1224 Query: 192 KDKIKYYSITRGIFNXXXXXXXXXXXXPGMNEWKNWLKGNYAYNLSQSKWSRLVLVAKKW 371 KDKIK Y +TRGIF+ G NEW+NWLKG+Y YNLSQ+KWSR LV +KW Sbjct: 1225 KDKIKDYCMTRGIFD--SKSKQKKIYKSGKNEWENWLKGHYQYNLSQTKWSR--LVPQKW 1280 Query: 372 RKKINQNCTIHNKESMKFSSYKKEKDRSIHYKKENFYTVYL--WPNQKEKLKKQYVYDLL 545 R +INQ I NK S+KF S+KKEKD+ IHY K+N+Y + + +QKEK KK Y Y LL Sbjct: 1281 RNRINQRSMIQNKNSIKFDSHKKEKDQLIHYMKQNYYAMAVDSLTSQKEKFKKHYRYYLL 1340 Query: 546 SHKYIYYGNSKDSSIYKPKLQLKRNQKIPYNFNIQKP 656 SHKY+ YGN KDS IY+ LQ+K +Q+IPYNFN KP Sbjct: 1341 SHKYMNYGNRKDSYIYESTLQVKGDQEIPYNFNTLKP 1377