BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00020861
         (1872 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containi...   592   e-166
ref|XP_004966403.1| PREDICTED: pentatricopeptide repeat-containi...   588   e-165
ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group] g...   588   e-165
dbj|BAJ88981.1| predicted protein [Hordeum vulgare subsp. vulgare]    583   e-164
ref|XP_002437576.1| hypothetical protein SORBIDRAFT_10g029640 [S...   572   e-160
gb|AFW69441.1| hypothetical protein ZEAMMB73_914225 [Zea mays]        565   e-158
gb|EXB29192.1| hypothetical protein L484_019727 [Morus notabilis]     560   e-157
gb|EOY09997.1| Pentatricopeptide repeat-containing protein, puta...   558   e-156
ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containi...   550   e-154
ref|XP_006657333.1| PREDICTED: pentatricopeptide repeat-containi...   546   e-153
dbj|BAJ89628.1| predicted protein [Hordeum vulgare subsp. vulgare]    541   e-151
gb|EAZ02324.1| hypothetical protein OsI_24426 [Oryza sativa Indi...   539   e-150
ref|XP_004249757.1| PREDICTED: pentatricopeptide repeat-containi...   533   e-148
ref|XP_006428506.1| hypothetical protein CICLE_v10011504mg [Citr...   530   e-147
ref|XP_006491815.1| PREDICTED: pentatricopeptide repeat-containi...   528   e-147
ref|XP_006351327.1| PREDICTED: pentatricopeptide repeat-containi...   528   e-147
ref|XP_002519998.1| pentatricopeptide repeat-containing protein,...   526   e-147
ref|XP_006850860.1| hypothetical protein AMTR_s00025p00142780 [A...   526   e-146
ref|XP_006573837.1| PREDICTED: pentatricopeptide repeat-containi...   522   e-145
gb|EOY09998.1| Pentatricopeptide repeat-containing protein, puta...   515   e-143

>ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Brachypodium distachyon]
          Length = 492

 Score =  592 bits (1527), Expect = e-166
 Identities = 281/435 (64%), Positives = 357/435 (82%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            Y+  I  H S   L  SLH+L+ MEAAGMRPSAA+Y R++ AL R GRTLEA+A+  EM+
Sbjct: 57   YNRDIQPHASSD-LAHSLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMR 115

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
              G+RP +  YNALL G L +  L +ADR+L++M+ +GV  NR+TY +LLD+Y  +GRLE
Sbjct: 116  HLGLRPDAAHYNALLEGLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLE 175

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            D+WWVLGEMK + I+LD+  YS +++LYRDNGMWKKA DL+MEM+ELG+  DV++YN +I
Sbjct: 176  DSWWVLGEMKRRGIQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLI 235

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
            DTFGKY QL +A ++F+KMR+EG+KPDI TWN LIRWHCR G+++RAL FF  MQE+G+Y
Sbjct: 236  DTFGKYGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMY 295

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
            PDPKIF++IISRLGEQG+WD++K LF  M+ RG+ ESG +Y+VLVDIYGQYG F++A EC
Sbjct: 296  PDPKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHEC 355

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            VAALKA+ + +S S+FCVLANAYAQQGLCEQT+ VLQLME +G EPNL+MLNLL+NAFS 
Sbjct: 356  VAALKAEELHLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFST 415

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKA 1537
            AG+HLEA  VF+HIK+SG+SPDV+TY TLMK FMR +K+++V  +Y EMERAGCTPDRKA
Sbjct: 416  AGRHLEAVAVFQHIKDSGMSPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERAGCTPDRKA 475

Query: 1538 REMLHDASLICLQRG 1582
            REMLHDAS+   QRG
Sbjct: 476  REMLHDASVTLEQRG 490


>ref|XP_004966403.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Setaria italica]
            gi|514768098|ref|XP_004966404.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Setaria italica]
            gi|514768101|ref|XP_004966405.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X3 [Setaria italica]
          Length = 493

 Score =  588 bits (1515), Expect = e-165
 Identities = 283/435 (65%), Positives = 354/435 (81%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            YD  I SH     L  SL LL+ MEAAG RPSAA+Y R++ AL R GRTLEA+A+  EM+
Sbjct: 57   YDRDIQSHAGSD-LPLSLGLLADMEAAGARPSAAAYARLIRALARAGRTLEAEALLLEMR 115

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
              G RP +  YNALL G L +  L +ADR+L++M+ +GV  NR+TY +LLD+Y  +GRLE
Sbjct: 116  RLGPRPGAAHYNALLEGLLARAHLRLADRLLLQMADDGVARNRRTYVLLLDAYARAGRLE 175

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            D+WWVLGEM+ + IRLD+  YS +++LYRDNGMWKKA+DLVMEM+E+G+  DV++YN +I
Sbjct: 176  DSWWVLGEMRRRGIRLDTAGYSMLVRLYRDNGMWKKAIDLVMEMQEVGVELDVKIYNSLI 235

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
            DTFGKY QL +A +VFDKMR+EG+KPDI+TWN LIRWHCR G+++RAL F T MQE+G Y
Sbjct: 236  DTFGKYGQLADARRVFDKMRAEGIKPDISTWNALIRWHCRVGNMKRALRFLTAMQEEGRY 295

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
            PDPKIF+ II RLGEQG+W +IK LF GMK RG  ESG +Y+VLVDIYGQYG F++A EC
Sbjct: 296  PDPKIFVMIIGRLGEQGKWGEIKKLFDGMKNRGFKESGAVYAVLVDIYGQYGYFRDAREC 355

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            +AALKA+  Q+SA +FCVLANAYAQQGLCEQT+ VLQLME++G EPNL+MLNLL+NAF  
Sbjct: 356  IAALKAENTQLSARIFCVLANAYAQQGLCEQTVNVLQLMEEEGFEPNLVMLNLLINAFGT 415

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKA 1537
            AG+HLEA  VF+HIK+SG+SPDV+TY TLMK FMRA+K+++V  +Y++MER GCTPDRKA
Sbjct: 416  AGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKVSEVYKDMERDGCTPDRKA 475

Query: 1538 REMLHDASLICLQRG 1582
            REMLHDAS+I  QRG
Sbjct: 476  REMLHDASVILEQRG 490


>ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
            gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza
            sativa Japonica Group] gi|215693375|dbj|BAG88757.1|
            unnamed protein product [Oryza sativa Japonica Group]
            gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa
            Japonica Group]
          Length = 492

 Score =  588 bits (1515), Expect = e-165
 Identities = 282/435 (64%), Positives = 355/435 (81%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            YD  I  H     L  SL LL+ M+AAG+RPS A+Y R++ AL R GRTLEA+A+  EM+
Sbjct: 55   YDRGIQHHAGSD-LASSLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMR 113

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
              G+RP +  YNALL G L    L +ADR+L++M+ +GV  NR+TY +LL++Y  +GRLE
Sbjct: 114  RLGLRPDAAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLE 173

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            D+WWVLGEMK + IRLD+  YS +++LYRDNGMWKKA DL+MEM+ELG+  DV++YN +I
Sbjct: 174  DSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLI 233

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
            DTFGKY QL +A KVFDKM +EG+KPDITTWN LIRWHCR G+ +RAL FF  MQE+G+Y
Sbjct: 234  DTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMY 293

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
            PDPKIF+TIISRLGEQG+WD+IK LF GM+ RG+ ESG +Y+VLVDIYGQYG F++A +C
Sbjct: 294  PDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDC 353

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            VAALKA+ +Q+S S+FCVLANAYAQQGLCEQT+ VLQLME +G EPNL+MLNLL+NAF  
Sbjct: 354  VAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGT 413

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKA 1537
            AG+HLEA  V +HIK+SG+SPDV+TY TLMKAFMRA+K+++V  +Y+EME AGCTPDRKA
Sbjct: 414  AGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGAGCTPDRKA 473

Query: 1538 REMLHDASLICLQRG 1582
            REML+DAS++  QRG
Sbjct: 474  REMLNDASIVLEQRG 488


>dbj|BAJ88981.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 491

 Score =  583 bits (1504), Expect = e-164
 Identities = 279/435 (64%), Positives = 353/435 (81%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            YD  I  H     L RSL LL+ M+AAGMRPSAA+Y R++ AL R GR LEA+A+  EM+
Sbjct: 56   YDRDIQPHAGSD-LARSLQLLADMQAAGMRPSAAAYARLIRALARAGRALEAEALLLEMR 114

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
              G+RP +  YNALL G L +  L +ADR+L++M+ +GV  NR+TY +LLD+Y  +GRLE
Sbjct: 115  HLGLRPDAAHYNALLEGLLARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLE 174

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            D+WWVLGEMK   IRLD+  YS +++LYRD+GMWKKA DL+MEM+E+G+  DV++YN +I
Sbjct: 175  DSWWVLGEMKRWGIRLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLI 234

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
            DTFGKY QL +A K+F+KMR +G+KPDI TWN LIRWHCR G+++RAL F   MQE+G+Y
Sbjct: 235  DTFGKYGQLADARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMY 294

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
            PDPKIF+TII++LGEQG+WD++K LF  M+ RG  ESG IY+VLVDIYGQYG F++A+EC
Sbjct: 295  PDPKIFITIINKLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQEC 354

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            VAALKA+ +Q+S S+FCVLANAYAQQGLCEQT+ VLQLME +G EPNL+MLNLL+NAFS 
Sbjct: 355  VAALKAENLQLSPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFST 414

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKA 1537
            AG+HLEA  VF+HIK+SG+SPDV+TY TLMKAFMR ++Y++V  +Y EMERAGCTPDRKA
Sbjct: 415  AGRHLEAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVKRYEKVSEVYSEMERAGCTPDRKA 474

Query: 1538 REMLHDASLICLQRG 1582
            REMLHDAS+   Q G
Sbjct: 475  REMLHDASVTMEQMG 489


>ref|XP_002437576.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
            gi|241915799|gb|EER88943.1| hypothetical protein
            SORBIDRAFT_10g029640 [Sorghum bicolor]
          Length = 429

 Score =  572 bits (1474), Expect = e-160
 Identities = 267/412 (64%), Positives = 344/412 (83%)
 Frame = +2

Query: 347  MEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMKWSGIRPTSRDYNALLGGFLRKGQ 526
            M+A+G RPS+ +Y R++ AL R GR LEA+A+  EM+  G RP +  YNALL G L    
Sbjct: 1    MQASGGRPSSGAYARLIRALSRAGRALEAEALLLEMRRHGPRPDAAHYNALLEGLLAAAH 60

Query: 527  LLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLEDTWWVLGEMKAKRIRLDSFVYSK 706
            L +ADR+L++M+ +GV  NR+TY +LL +Y  +GRLED+WWVLGEM+ + IRLD+  YS 
Sbjct: 61   LRLADRLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRRGIRLDTAGYSM 120

Query: 707  IIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMIDTFGKYDQLDEAVKVFDKMRSEG 886
            +++LYRDNGMWKKA+DLVMEM+E+G+  DV++Y+ +IDTFGKY QL +A +VFDKMR+EG
Sbjct: 121  LVRLYRDNGMWKKAIDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKMRAEG 180

Query: 887  LKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGEQGRWDDIK 1066
            +KPDI+TWN LI+WHCR G+++RAL FFT MQE+G+YPDPKIF+ IISRLGEQG+WD+IK
Sbjct: 181  IKPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIK 240

Query: 1067 NLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEECVAALKAKGIQMSASLFCVLANAY 1246
             LF GMK RG  ESG +Y+VLVDIYGQYG F++A EC+AAL+A+ +Q+S  +FCVLANAY
Sbjct: 241  KLFDGMKNRGFKESGAVYAVLVDIYGQYGHFRDARECIAALRAENMQLSPRVFCVLANAY 300

Query: 1247 AQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSIAGKHLEATTVFEHIKESGISPDV 1426
            AQQGLCEQT+ VLQLME++G EPNL+MLNLL+NAF  AG+HLEA  VF+HIK+SG+SPDV
Sbjct: 301  AQQGLCEQTVNVLQLMEEEGFEPNLVMLNLLINAFGTAGRHLEALAVFQHIKDSGMSPDV 360

Query: 1427 ITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKAREMLHDASLICLQRG 1582
            +TY TLMK FMRA+K+++V  +YREMERAGCTPDRKAREMLHDA+++  QRG
Sbjct: 361  VTYTTLMKTFMRAKKFEKVSEVYREMERAGCTPDRKAREMLHDATVVLEQRG 412


>gb|AFW69441.1| hypothetical protein ZEAMMB73_914225 [Zea mays]
          Length = 504

 Score =  565 bits (1457), Expect = e-158
 Identities = 268/435 (61%), Positives = 349/435 (80%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            YD  I SH     L RSL LL+ M+A+G RPS ++Y R++ AL R GR LEA+A+  EM+
Sbjct: 57   YDRAIQSHAGSD-LARSLGLLADMQASGGRPSGSAYARLIRALSRAGRALEAEALLLEMR 115

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
              G RP +  YNALL G L    L +AD +L++M+ +GV  NR+TY +LL +Y  +GRLE
Sbjct: 116  RLGPRPEAAHYNALLEGLLAAAHLRLADLLLLQMADDGVARNRRTYTLLLGAYARAGRLE 175

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            D+WWVLGEM+   IRLD+  YS +++LYRDNGMWKKA DLVMEM+E+G+  DV++Y+ +I
Sbjct: 176  DSWWVLGEMRRWGIRLDTAGYSMLVRLYRDNGMWKKATDLVMEMQEVGVELDVKIYSGLI 235

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
            DTFGKY QL +A ++FDKMR+EG++PDI+TWN LI+WHCR G+++RAL FFT MQE+G+Y
Sbjct: 236  DTFGKYGQLADARRMFDKMRAEGVRPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGMY 295

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
            PDPKIF+ IISRLGEQG+WD+IK LF GM  RG  ESG +Y++LVDIYGQYG F++A++C
Sbjct: 296  PDPKIFVMIISRLGEQGKWDEIKKLFDGMNNRGFKESGAVYAILVDIYGQYGHFRDAQDC 355

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            +AAL+A+  Q+   +FCV+ANAYAQQGLCEQT+ VLQLME++G EPNL+MLN L+NAF  
Sbjct: 356  IAALRAENTQLLPRVFCVIANAYAQQGLCEQTVNVLQLMEEEGFEPNLVMLNSLINAFGT 415

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKA 1537
            AG+HLEA  VF+HIK+SG+SPDV+TY TLMK FMRA+K+++V  +YREMERAGC PDRKA
Sbjct: 416  AGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKVSEVYREMERAGCAPDRKA 475

Query: 1538 REMLHDASLICLQRG 1582
            REMLHDA+++  QRG
Sbjct: 476  REMLHDATVVLEQRG 490


>gb|EXB29192.1| hypothetical protein L484_019727 [Morus notabilis]
          Length = 506

 Score =  560 bits (1444), Expect = e-157
 Identities = 267/424 (62%), Positives = 340/424 (80%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            Y+ LI  +C  G +D ++ LL+++   G  PS A+Y  ++ ALG  GRTLEA+ +F+EM+
Sbjct: 73   YNHLIREYCRAGNVDGAMTLLAQLNGLGFHPSFATYACLIEALGSVGRTLEAECLFQEMR 132

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
            + G +P  +  N LL G L+KG L +  RVL  M + GVE NR++Y ILLD YVN+GRLE
Sbjct: 133  FFGFKPGIKLCNVLLKGCLKKGLLEVGIRVLELMDEVGVEKNRESYEILLDYYVNAGRLE 192

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            DTWWV+ EM++K  RL SFVY K+I LYRDNGMWKKAMD+V E+RE+G+    ++YN +I
Sbjct: 193  DTWWVINEMRSKGFRLSSFVYGKVIGLYRDNGMWKKAMDVVEEIREMGLASVRKVYNSII 252

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
            DTFGKY +LD+A++VF+KMR E +KPDITTWN LI WHCRAGD+ +AL  F EMQE+GLY
Sbjct: 253  DTFGKYGELDDALQVFEKMRGENVKPDITTWNSLILWHCRAGDVGKALELFAEMQEEGLY 312

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
            PDPKIF+T+ISRLGEQG+WD IK +F+ M  RG  +SG+IY VLVDIYGQYG FQ AEEC
Sbjct: 313  PDPKIFITVISRLGEQGKWDMIKKMFENMNCRGYKKSGVIYGVLVDIYGQYGKFQGAEEC 372

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            ++ALK +G+ +SAS+FCVLANAYAQQGLC+QTLKVLQLME +G EPN++MLN+L+NAF I
Sbjct: 373  ISALKWEGLPISASVFCVLANAYAQQGLCDQTLKVLQLMEAEGIEPNVVMLNVLINAFGI 432

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKA 1537
            AG+HLEA +++ HIKE G SPDV+TY TLMKAF+RA+K D+VP IY+EME AGCTPDRKA
Sbjct: 433  AGRHLEALSIYHHIKEIGFSPDVVTYTTLMKAFIRAKKCDKVPEIYKEMECAGCTPDRKA 492

Query: 1538 REML 1549
            R+ML
Sbjct: 493  RQML 496



 Score = 86.7 bits (213), Expect = 3e-14
 Identities = 65/357 (18%), Positives = 144/357 (40%), Gaps = 35/357 (9%)
 Frame = +2

Query: 563  KEGVEWNRQTYFILLDSYVNSGRLEDTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWK 742
            + G E + +TY  L+  Y  +G ++    +L ++           Y+ +I+     G   
Sbjct: 63   RAGEELSGETYNHLIREYCRAGNVDGAMTLLAQLNGLGFHPSFATYACLIEALGSVGRTL 122

Query: 743  KAMDLVMEMRELGIVPDVRMYNDMIDTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLI 922
            +A  L  EMR  G  P +++ N ++    K   L+  ++V + M   G++ +  ++ +L+
Sbjct: 123  EAECLFQEMRFFGFKPGIKLCNVLLKGCLKKGLLEVGIRVLELMDEVGVEKNRESYEILL 182

Query: 923  RWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMT 1102
             ++  AG LE       EM+ +G      ++  +I    + G W    ++ + ++  G+ 
Sbjct: 183  DYYVNAGRLEDTWWVINEMRSKGFRLSSFVYGKVIGLYRDNGMWKKAMDVVEEIREMGLA 242

Query: 1103 ESGIIYSVLVDIYGQYGMFQN-----------------------------------AEEC 1177
                +Y+ ++D +G+YG   +                                   A E 
Sbjct: 243  SVRKVYNSIIDTFGKYGELDDALQVFEKMRGENVKPDITTWNSLILWHCRAGDVGKALEL 302

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
             A ++ +G+     +F  + +   +QG  +   K+ + M   G + + ++  +L++ +  
Sbjct: 303  FAEMQEEGLYPDPKIFITVISRLGEQGKWDMIKKMFENMNCRGYKKSGVIYGVLVDIYGQ 362

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPD 1528
             GK   A      +K  G+      +C L  A+ +    D+   + + ME  G  P+
Sbjct: 363  YGKFQGAEECISALKWEGLPISASVFCVLANAYAQQGLCDQTLKVLQLMEAEGIEPN 419



 Score = 82.0 bits (201), Expect = 8e-13
 Identities = 55/245 (22%), Positives = 112/245 (45%), Gaps = 35/245 (14%)
 Frame = +2

Query: 905  TWNMLIRWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGEQGRWDDIKNLFKGM 1084
            T+N LIR +CRAG+++ A+    ++   G +P    +  +I  LG  GR  + + LF+ M
Sbjct: 72   TYNHLIREYCRAGNVDGAMTLLAQLNGLGFHPSFATYACLIEALGSVGRTLEAECLFQEM 131

Query: 1085 KY-------------------RGMTESGI----------------IYSVLVDIYGQYGMF 1159
            ++                   +G+ E GI                 Y +L+D Y   G  
Sbjct: 132  RFFGFKPGIKLCNVLLKGCLKKGLLEVGIRVLELMDEVGVEKNRESYEILLDYYVNAGRL 191

Query: 1160 QNAEECVAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLL 1339
            ++    +  +++KG ++S+ ++  +   Y   G+ ++ + V++ + + G      + N +
Sbjct: 192  EDTWWVINEMRSKGFRLSSFVYGKVIGLYRDNGMWKKAMDVVEEIREMGLASVRKVYNSI 251

Query: 1340 MNAFSIAGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGC 1519
            ++ F   G+  +A  VFE ++   + PD+ T+ +L+    RA    +   ++ EM+  G 
Sbjct: 252  IDTFGKYGELDDALQVFEKMRGENVKPDITTWNSLILWHCRAGDVGKALELFAEMQEEGL 311

Query: 1520 TPDRK 1534
             PD K
Sbjct: 312  YPDPK 316


>gb|EOY09997.1| Pentatricopeptide repeat-containing protein, putative isoform 1
            [Theobroma cacao]
          Length = 513

 Score =  558 bits (1437), Expect = e-156
 Identities = 269/430 (62%), Positives = 345/430 (80%)
 Frame = +2

Query: 290  IHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMKWSGI 469
            I  +C  G +D ++ L++ MEA G  P++ SYG ++ +LG  GRTLEADA+F+EM   G+
Sbjct: 83   IQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEADALFQEMICLGL 142

Query: 470  RPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLEDTWW 649
            +P  R +N LL GFLRKG L +A +VLV M + GV  N++TY ILLD YVN+GRLEDTW 
Sbjct: 143  KPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYYVNAGRLEDTWM 202

Query: 650  VLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMIDTFG 829
            V+ EMK K I L+SFVYSKII LYRDNGMW+KA+ +V E+RE GI  D ++YN +IDTFG
Sbjct: 203  VVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDRQIYNSIIDTFG 262

Query: 830  KYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLYPDPK 1009
            KY +L EA++VF+KM+ E ++PDITTWN LI+WHC+AGDL +AL  FTEMQEQGLYPDPK
Sbjct: 263  KYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFTEMQEQGLYPDPK 322

Query: 1010 IFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEECVAAL 1189
            IF+++ISRLGE G+WD IK  F+ MK RG  + G IY++LVDIYGQYG FQ+AE C++AL
Sbjct: 323  IFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYGRFQDAEVCISAL 382

Query: 1190 KAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSIAGKH 1369
            K++G+  SAS+FCVLANAYAQQG CEQT+KVLQ+ME +G EPN++MLN+L+NAF IAG+H
Sbjct: 383  KSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNIVMLNVLINAFGIAGRH 442

Query: 1370 LEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKAREML 1549
             EA +++ HI++SGISPDVITY TLMKAF+RA+K+D VP IYREME +GCTPDRKAR+ML
Sbjct: 443  EEALSIYHHIRDSGISPDVITYSTLMKAFIRAKKFDRVPEIYREMESSGCTPDRKARQML 502

Query: 1550 HDASLICLQR 1579
              A ++  QR
Sbjct: 503  QTALMVLEQR 512



 Score =  108 bits (270), Expect = 8e-21
 Identities = 69/278 (24%), Positives = 134/278 (48%)
 Frame = +2

Query: 683  LDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMIDTFGKYDQLDEAVKV 862
            L S ++++ I+ Y   G    AM LV  M  +G  P+   Y  +I++ G   +  EA  +
Sbjct: 74   LTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEADAL 133

Query: 863  FDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGE 1042
            F +M   GLKP I  +N+L++   R G L  A+     M E+G+  + + +  ++     
Sbjct: 134  FQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYYVN 193

Query: 1043 QGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEECVAALKAKGIQMSASL 1222
             GR +D   +   MK +G+  +  +YS ++ +Y   GM++ A   V  ++ KGI +   +
Sbjct: 194  AGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDRQI 253

Query: 1223 FCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSIAGKHLEATTVFEHIK 1402
            +  + + + + G   + L+V + M+ +   P++   N L+     AG   +A  +F  ++
Sbjct: 254  YNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFTEMQ 313

Query: 1403 ESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAG 1516
            E G+ PD   + +L+       K+D +   +  M+  G
Sbjct: 314  EQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRG 351



 Score = 97.8 bits (242), Expect = 1e-17
 Identities = 74/344 (21%), Positives = 152/344 (44%)
 Frame = +2

Query: 560  SKEGVEWNRQTYFILLDSYVNSGRLEDTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMW 739
            S  G E   + +   +  Y   G +++   ++  M+A     +S  Y  +I+     G  
Sbjct: 68   SNSGEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRT 127

Query: 740  KKAMDLVMEMRELGIVPDVRMYNDMIDTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNML 919
             +A  L  EM  LG+ P +R++N ++  F +   L  AVKV   M   G+  +  T+ +L
Sbjct: 128  LEADALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEIL 187

Query: 920  IRWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGM 1099
            + ++  AG LE       EM+E+G++ +  ++  II    + G W     + + ++ +G+
Sbjct: 188  LDYYVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGI 247

Query: 1100 TESGIIYSVLVDIYGQYGMFQNAEECVAALKAKGIQMSASLFCVLANAYAQQGLCEQTLK 1279
            +    IY+ ++D +G+YG    A E    +K + I+   + +  L   + + G   + L+
Sbjct: 248  SLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALE 307

Query: 1280 VLQLMEDDGTEPNLIMLNLLMNAFSIAGKHLEATTVFEHIKESGISPDVITYCTLMKAFM 1459
            +   M++ G  P+  +   L++     GK       FE++K  G       Y  L+  + 
Sbjct: 308  LFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYG 367

Query: 1460 RARKYDEVPIIYREMERAGCTPDRKAREMLHDASLICLQRGGFS 1591
            +  ++ +  +         C    K+  +L  AS+ C+    ++
Sbjct: 368  QYGRFQDAEV---------CISALKSEGLLPSASMFCVLANAYA 402


>ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Vitis vinifera]
          Length = 494

 Score =  550 bits (1418), Expect = e-154
 Identities = 270/434 (62%), Positives = 336/434 (77%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            Y+  I   C  G +D+++ LL++MEA G   S  SY  ++ ALG  GRTLEA+A+FREM 
Sbjct: 26   YNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMV 85

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
              G++   R YN +L   LRKG L +AD+VL EM   G+  NR TY  L+D Y  +GRL 
Sbjct: 86   HLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLN 145

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            D W V+GEM       DSFVYSK+I +YRDNGMWKKAM++V E+RE+G+  D R+YN +I
Sbjct: 146  DVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSII 205

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
            DTFGK  +L EA++VF+KM+ EG+KPDI TWN LI+WHC+AGD+ +AL  F++MQE+GLY
Sbjct: 206  DTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLY 265

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
            PDPKIF+TIISRLGEQG+WD IK  F+ MK RG   SG IY++LVDIYGQYG FQ  EEC
Sbjct: 266  PDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEEC 325

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            ++ALK++GIQ SAS+FCVLANAYAQQGLCEQT+KVLQLME +G EPNLIMLN+L+NAF I
Sbjct: 326  ISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGI 385

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKA 1537
            AG+HLEA +V+ HIK++GISPDV+TY TLMKA +RARK+D+VP IY EME AGCTPDRKA
Sbjct: 386  AGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGCTPDRKA 445

Query: 1538 REMLHDASLICLQR 1579
            REML  A L+  QR
Sbjct: 446  REMLQTALLVLQQR 459



 Score =  109 bits (273), Expect = 4e-21
 Identities = 71/279 (25%), Positives = 131/279 (46%)
 Frame = +2

Query: 683  LDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMIDTFGKYDQLDEAVKV 862
            L   VY+  I+     G   KAM L+ +M  LG    +  Y  +I+  G   +  EA  +
Sbjct: 21   LSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAI 80

Query: 863  FDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGE 1042
            F +M   GLK D+  +N+++R   R G LE A     EM   G+  +   +  ++   G 
Sbjct: 81   FREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGR 140

Query: 1043 QGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEECVAALKAKGIQMSASL 1222
             GR +D+  +   M   G      +YS ++ +Y   GM++ A E V  ++  G+ +   +
Sbjct: 141  AGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRI 200

Query: 1223 FCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSIAGKHLEATTVFEHIK 1402
            +  + + + + G   + L+V + M+++G +P+++  N L+     AG   +A  +F  ++
Sbjct: 201  YNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQ 260

Query: 1403 ESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGC 1519
            E G+ PD   + T++       K+D   +I R  E   C
Sbjct: 261  EEGLYPDPKIFITIISRLGEQGKWD---VIKRNFENMKC 296


>ref|XP_006657333.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like, partial [Oryza brachyantha]
          Length = 389

 Score =  546 bits (1408), Expect = e-153
 Identities = 259/387 (66%), Positives = 324/387 (83%)
 Frame = +2

Query: 422  TLEADAVFREMKWSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFI 601
            TLEA+A+  EM+  G+RP +  YNALL G L +  L +ADR+L++M+ +GV  NR+TY +
Sbjct: 1    TLEAEALLLEMRCLGLRPDAAHYNALLEGLLSRAHLRLADRLLLQMADDGVARNRRTYML 60

Query: 602  LLDSYVNSGRLEDTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELG 781
            LL++Y  +GRLED+WWVLGEMK + IRLD+  YS +++LYRDNGMWKKA DL+MEM++ G
Sbjct: 61   LLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQDHG 120

Query: 782  IVPDVRMYNDMIDTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERAL 961
            +  DV++YN +IDTFGKY QL +A +VFDKM +EG+KPDITTWN LIRWHCR G+++RAL
Sbjct: 121  VELDVKIYNGLIDTFGKYGQLADARRVFDKMCAEGVKPDITTWNSLIRWHCRIGNMKRAL 180

Query: 962  GFFTEMQEQGLYPDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIY 1141
             FF  MQE G+YPDPKIF TIISRLGEQG+WD+IK LF GM+ RG+ ESG IY+VLVDIY
Sbjct: 181  RFFAAMQEDGMYPDPKIFATIISRLGEQGKWDEIKKLFHGMRNRGLKESGAIYAVLVDIY 240

Query: 1142 GQYGMFQNAEECVAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNL 1321
            GQYG F++A +CVAALKA+ +Q+S S+FCVLANAYAQQGLCEQT+ VLQLME +G EPNL
Sbjct: 241  GQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNL 300

Query: 1322 IMLNLLMNAFSIAGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYRE 1501
            +MLNLL+NAF  AG+HLEA  V +HIK+SG+SPDV+TY TLMKAFMRA+K+++V  IY+E
Sbjct: 301  VMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSDIYKE 360

Query: 1502 MERAGCTPDRKAREMLHDASLICLQRG 1582
            MERAGCTPDRKAREML+DAS I  QRG
Sbjct: 361  MERAGCTPDRKAREMLNDASAILEQRG 387


>dbj|BAJ89628.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 461

 Score =  541 bits (1393), Expect = e-151
 Identities = 257/406 (63%), Positives = 330/406 (81%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            YD  I  H     L RSL LL+ M+AAGMRPSAA+Y R++ AL R GR LEA+A+  EM+
Sbjct: 56   YDRDIQPHAGSD-LARSLQLLADMQAAGMRPSAAAYARLIRALARAGRALEAEALLLEMR 114

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
              G+RP +  YNALL G L +  L +ADR+L++M+ +GV  NR+TY +LLD+Y  +GRLE
Sbjct: 115  HLGLRPDAAHYNALLEGLLARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLE 174

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            D+WWVLGEMK   IRLD+  YS +++LYRD+GMWKKA DL+MEM+E+G+  DV++YN +I
Sbjct: 175  DSWWVLGEMKRWGIRLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLI 234

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
            DTFGKY QL +A K+F+KMR +G+KPDI TWN LIRWHCR G+++RAL F   MQE+G+Y
Sbjct: 235  DTFGKYGQLADARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMY 294

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
            PDPKIF+TII+RLGEQG+WD++K LF  M+ RG  ESG IY+VLVDIYGQYG F++A+EC
Sbjct: 295  PDPKIFITIINRLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQEC 354

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            VAALKA+ +Q+S S+FCVLANAYAQQGLCEQT+ VLQLME +G EPNL+MLNLL+NAFS 
Sbjct: 355  VAALKAENLQLSPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFST 414

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIY 1495
            AG+HLEA  VF+HIK+SG+SPDV+TY TLMKAFMR ++Y++V ++Y
Sbjct: 415  AGRHLEAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVKRYEKVRLLY 460


>gb|EAZ02324.1| hypothetical protein OsI_24426 [Oryza sativa Indica Group]
            gi|125598467|gb|EAZ38247.1| hypothetical protein
            OsJ_22623 [Oryza sativa Japonica Group]
          Length = 478

 Score =  539 bits (1388), Expect = e-150
 Identities = 258/401 (64%), Positives = 326/401 (81%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            YD  I  H     L  SL LL+ M+AAG+RPS A+Y R++ AL R GRTLEA+A+  EM+
Sbjct: 55   YDRGIQHHAGSD-LASSLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMR 113

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
              G+RP +  YNALL G L    L +ADR+L++M+ +GV  NR+TY +LL++Y  +GRLE
Sbjct: 114  RLGLRPDAAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLE 173

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            D+WWVLGEMK + IRLD+  YS +++LYRDNGMWKKA DL+MEM+ELG+  DV++YN +I
Sbjct: 174  DSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLI 233

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
            DTFGKY QL +A KVFDKM +EG+KPDITTWN LIRWHCR G+ +RAL FF  MQE+G+Y
Sbjct: 234  DTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMY 293

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
            PDPKIF+TIISRLGEQG+WD+IK LF GM+ RG+ ESG +Y+VLVDIYGQYG F++A +C
Sbjct: 294  PDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDC 353

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            VAALKA+ +Q+S S+FCVLANAYAQQGLCEQT+ VLQLME +G EPNL+MLNLL+NAF  
Sbjct: 354  VAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGT 413

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDE 1480
            AG+HLEA  V +HIK+SG+SPDV+TY TLMKAFMRA+K+++
Sbjct: 414  AGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEK 454



 Score = 91.7 bits (226), Expect = 1e-15
 Identities = 58/257 (22%), Positives = 115/257 (44%)
 Frame = +2

Query: 746  AMDLVMEMRELGIVPDVRMYNDMIDTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIR 925
            ++ L+ +M+  G+ P    Y  +I    +  +  EA  +  +MR  GL+PD   +N L+ 
Sbjct: 70   SLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLE 129

Query: 926  WHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTE 1105
                   L  A     +M + G+  + + ++ +++     GR +D   +   MK RG+  
Sbjct: 130  GLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRL 189

Query: 1106 SGIIYSVLVDIYGQYGMFQNAEECVAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVL 1285
                YS LV +Y   GM++ A + +  ++  G+++   ++  L + + + G      KV 
Sbjct: 190  DTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVF 249

Query: 1286 QLMEDDGTEPNLIMLNLLMNAFSIAGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRA 1465
              M  +G +P++   N L+      G    A   F  ++E G+ PD   + T++      
Sbjct: 250  DKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQ 309

Query: 1466 RKYDEVPIIYREMERAG 1516
             K+DE+  ++  M   G
Sbjct: 310  GKWDEIKKLFHGMRNRG 326


>ref|XP_004249757.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
          Length = 523

 Score =  533 bits (1373), Expect = e-148
 Identities = 258/434 (59%), Positives = 336/434 (77%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            Y+  I   C++G +D+++ LLS MEA G  PS  SY  ++ ALG  GRT EADA+F+EM 
Sbjct: 88   YNESICELCTEGDIDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTSEADAIFQEML 147

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
             S  +P  + +N LL  FLRKG L +AD+VL+ +    V+ N++TY ILL+ YV++GRLE
Sbjct: 148  CSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILLEYYVSAGRLE 207

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            DTW ++ +M+ +   L+SFVYSKII+LYRDNGMWKKA+ +V E+RE+G+  D R++N +I
Sbjct: 208  DTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLDKRLFNSII 267

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
            DTFGKY +L EA+ +FDKMR EG+KPD  TWN LIRWHC+ G L+ A+  F EMQEQGLY
Sbjct: 268  DTFGKYGELGEALGMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDTAIELFNEMQEQGLY 327

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
            PDPKIF+ I + L EQGRWDDI  + + M+ RG  +SG IY+VLVDIYGQ G F++AE C
Sbjct: 328  PDPKIFIIINTHLVEQGRWDDIDTILESMQGRGHHKSGAIYAVLVDIYGQQGRFEDAEYC 387

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            + ALK +G+Q+S S+FCVLA+AYAQQGLCEQT+KVLQ+ME +G EPNLIMLN+L+NAF  
Sbjct: 388  LNALKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIMLNMLINAFGN 447

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKA 1537
            AG+H+EA ++++HIKE GI+PDVITY TLMKAF+RA+K+D+VP IY EME  GCTPDRKA
Sbjct: 448  AGRHMEAQSIYQHIKEMGITPDVITYSTLMKAFLRAKKFDQVPKIYSEMESTGCTPDRKA 507

Query: 1538 REMLHDASLICLQR 1579
            REML  A +I  QR
Sbjct: 508  REMLQSALMILEQR 521



 Score = 62.4 bits (150), Expect = 7e-07
 Identities = 53/318 (16%), Positives = 129/318 (40%)
 Frame = +2

Query: 563  KEGVEWNRQTYFILLDSYVNSGRLEDTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWK 742
            + G E +   Y   +      G ++    +L EM+A         YS +I      G   
Sbjct: 78   RNGEEISYDLYNESICELCTEGDIDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTS 137

Query: 743  KAMDLVMEMRELGIVPDVRMYNDMIDTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLI 922
            +A  +  EM      P ++++N ++ +F +   L  A KV   +    +  +  T+ +L+
Sbjct: 138  EADAIFQEMLCSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILL 197

Query: 923  RWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMT 1102
             ++  AG LE       +M+ +    +  ++  II    + G W     + + ++  G+ 
Sbjct: 198  EYYVSAGRLEDTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLR 257

Query: 1103 ESGIIYSVLVDIYGQYGMFQNAEECVAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKV 1282
                +++ ++D +G+YG    A      ++ +GI+     +  L   + + G  +  +++
Sbjct: 258  LDKRLFNSIIDTFGKYGELGEALGMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDTAIEL 317

Query: 1283 LQLMEDDGTEPNLIMLNLLMNAFSIAGKHLEATTVFEHIKESGISPDVITYCTLMKAFMR 1462
               M++ G  P+  +  ++       G+  +  T+ E ++  G       Y  L+  + +
Sbjct: 318  FNEMQEQGLYPDPKIFIIINTHLVEQGRWDDIDTILESMQGRGHHKSGAIYAVLVDIYGQ 377

Query: 1463 ARKYDEVPIIYREMERAG 1516
              ++++       ++  G
Sbjct: 378  QGRFEDAEYCLNALKLEG 395


>ref|XP_006428506.1| hypothetical protein CICLE_v10011504mg [Citrus clementina]
            gi|567871835|ref|XP_006428507.1| hypothetical protein
            CICLE_v10011504mg [Citrus clementina]
            gi|557530563|gb|ESR41746.1| hypothetical protein
            CICLE_v10011504mg [Citrus clementina]
            gi|557530564|gb|ESR41747.1| hypothetical protein
            CICLE_v10011504mg [Citrus clementina]
          Length = 514

 Score =  530 bits (1364), Expect = e-147
 Identities = 253/434 (58%), Positives = 337/434 (77%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            Y+  I   C  G +D ++ LL++M+A G  PS+ SY  ++ AL   GRTLEADA+F+EM 
Sbjct: 80   YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
              G  P  R YN LL GFL+KG L +  R+L+ M   G+  N++TY ILLD +VN+GRL+
Sbjct: 140  CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            DTW ++ EM++K  +L+SFVY K+I LYRDNGMWKKA+ +V E+RE+G+  D ++YN +I
Sbjct: 200  DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
            DTFGKY +L EA++VF+KMR E ++PDI TWN LIRWHC+AGD+ +AL  FT+MQEQG Y
Sbjct: 260  DTFGKYGELVEALEVFEKMRQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
            PDPKIF+TIIS LGE G+WD IK  F+ MK RG  + G IY++LVDIYGQYG F++ EEC
Sbjct: 320  PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            +AALK +G+Q S S+FC+LANAYAQQGLCEQT+KVLQLME +G EPNL+MLN+L+NAF +
Sbjct: 380  IAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGV 439

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKA 1537
            AGK+ EA +V+  +K+ GISPD++TY TLMKAF+RA+K+ +VP IY++ME +GCTPDRKA
Sbjct: 440  AGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKA 499

Query: 1538 REMLHDASLICLQR 1579
            R++L  A ++  QR
Sbjct: 500  RQILQSALVVLEQR 513



 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 59/284 (20%), Positives = 124/284 (43%)
 Frame = +2

Query: 560  SKEGVEWNRQTYFILLDSYVNSGRLEDTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMW 739
            S  G E++  +Y   +      G +++   +L +M+A      S  Y+ +I+     G  
Sbjct: 69   SNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRT 128

Query: 740  KKAMDLVMEMRELGIVPDVRMYNDMIDTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNML 919
             +A  +  EM   G  P +R YN ++  F K   L    ++   M   G+  +  T+ +L
Sbjct: 129  LEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEIL 188

Query: 920  IRWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGM 1099
            + +H  AG L+       EM+ +G   +  ++  +I    + G W     + + ++  G+
Sbjct: 189  LDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGL 248

Query: 1100 TESGIIYSVLVDIYGQYGMFQNAEECVAALKAKGIQMSASLFCVLANAYAQQGLCEQTLK 1279
            +    IY+ ++D +G+YG    A E    ++ + I+     +  L   + + G   + L+
Sbjct: 249  SLDRQIYNSIIDTFGKYGELVEALEVFEKMRQESIRPDIVTWNSLIRWHCKAGDVAKALE 308

Query: 1280 VLQLMEDDGTEPNLIMLNLLMNAFSIAGKHLEATTVFEHIKESG 1411
            +   M++ G  P+  +   +++     GK       FE++K+ G
Sbjct: 309  LFTQMQEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRG 352



 Score = 78.2 bits (191), Expect = 1e-11
 Identities = 48/245 (19%), Positives = 112/245 (45%), Gaps = 35/245 (14%)
 Frame = +2

Query: 905  TWNMLIRWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGEQGRWDDIKNLFKGM 1084
            ++N  I++ C+ GD++ A+    +MQ  G +P    + ++I  L   GR  +   +F+ M
Sbjct: 79   SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138

Query: 1085 --------------KYRGMTESGII---------------------YSVLVDIYGQYGMF 1159
                            RG  + G++                     Y +L+D +   G  
Sbjct: 139  VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198

Query: 1160 QNAEECVAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLL 1339
             +    +  +++KG Q+++ ++  +   Y   G+ ++ + +++ + + G   +  + N +
Sbjct: 199  DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258

Query: 1340 MNAFSIAGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGC 1519
            ++ F   G+ +EA  VFE +++  I PD++T+ +L++   +A    +   ++ +M+  G 
Sbjct: 259  IDTFGKYGELVEALEVFEKMRQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318

Query: 1520 TPDRK 1534
             PD K
Sbjct: 319  YPDPK 323


>ref|XP_006491815.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 514

 Score =  528 bits (1360), Expect = e-147
 Identities = 252/434 (58%), Positives = 337/434 (77%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            Y+  I   C  G +D ++ LL++M+A G  PS+ SY  ++ AL   GRTLEADA+F+EM 
Sbjct: 80   YNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEMV 139

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
              G  P  R YN LL GFL+KG L +  R+L+ M   G+  N++TY ILLD +VN+GRL+
Sbjct: 140  CFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRLD 199

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            DTW ++ EM++K  +L+SFVY K+I LYRDNGMWKKA+ +V E+RE+G+  D ++YN +I
Sbjct: 200  DTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSII 259

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
            DTFGKY +L EA++VF+KM+ E ++PDI TWN LIRWHC+AGD+ +AL  FT+MQEQG Y
Sbjct: 260  DTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFY 319

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
            PDPKIF+TIIS LGE G+WD IK  F+ MK RG  + G IY++LVDIYGQYG F++ EEC
Sbjct: 320  PDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRFRDPEEC 379

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            +AALK +G+Q S S+FC+LANAYAQQGLCEQT+KVLQLME +G EPNL+MLN+L+NAF +
Sbjct: 380  IAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVLINAFGV 439

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKA 1537
            AGK+ EA +V+  +K+ GISPD++TY TLMKAF+RA+K+ +VP IY++ME +GCTPDRKA
Sbjct: 440  AGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKA 499

Query: 1538 REMLHDASLICLQR 1579
            R++L  A ++  QR
Sbjct: 500  RQILQSALVVLEQR 513



 Score = 82.0 bits (201), Expect = 8e-13
 Identities = 64/319 (20%), Positives = 128/319 (40%)
 Frame = +2

Query: 560  SKEGVEWNRQTYFILLDSYVNSGRLEDTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMW 739
            S  G E++  +Y   +      G +++   +L +M+A      S  Y+ +I+     G  
Sbjct: 69   SNSGEEFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRT 128

Query: 740  KKAMDLVMEMRELGIVPDVRMYNDMIDTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNML 919
             +A  +  EM   G  P +R YN ++  F K   L    ++   M   G+  +  T+ +L
Sbjct: 129  LEADAIFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEIL 188

Query: 920  IRWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGM 1099
            + +H  AG L+       EM+ +G   +  ++  +I    + G W     + + ++  G+
Sbjct: 189  LDYHVNAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGL 248

Query: 1100 TESGIIYSVLVDIYGQYGMFQNAEECVAALKAKGIQMSASLFCVLANAYAQQGLCEQTLK 1279
            +    IY+ ++D +G+YG    A                                   L+
Sbjct: 249  SLDRQIYNSIIDTFGKYGELVEA-----------------------------------LE 273

Query: 1280 VLQLMEDDGTEPNLIMLNLLMNAFSIAGKHLEATTVFEHIKESGISPDVITYCTLMKAFM 1459
            V + M+ +   P+++  N L+     AG   +A  +F  ++E G  PD   + T++    
Sbjct: 274  VFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGFYPDPKIFITIISCLG 333

Query: 1460 RARKYDEVPIIYREMERAG 1516
               K+D +   +  M+  G
Sbjct: 334  ELGKWDVIKKNFENMKDRG 352



 Score = 77.8 bits (190), Expect = 2e-11
 Identities = 48/245 (19%), Positives = 112/245 (45%), Gaps = 35/245 (14%)
 Frame = +2

Query: 905  TWNMLIRWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGEQGRWDDIKNLFKGM 1084
            ++N  I++ C+ GD++ A+    +MQ  G +P    + ++I  L   GR  +   +F+ M
Sbjct: 79   SYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADAIFQEM 138

Query: 1085 --------------KYRGMTESGII---------------------YSVLVDIYGQYGMF 1159
                            RG  + G++                     Y +L+D +   G  
Sbjct: 139  VCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHVNAGRL 198

Query: 1160 QNAEECVAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLL 1339
             +    +  +++KG Q+++ ++  +   Y   G+ ++ + +++ + + G   +  + N +
Sbjct: 199  DDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQIYNSI 258

Query: 1340 MNAFSIAGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGC 1519
            ++ F   G+ +EA  VFE +++  I PD++T+ +L++   +A    +   ++ +M+  G 
Sbjct: 259  IDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQMQEQGF 318

Query: 1520 TPDRK 1534
             PD K
Sbjct: 319  YPDPK 323


>ref|XP_006351327.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Solanum tuberosum]
            gi|565369409|ref|XP_006351328.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Solanum tuberosum]
            gi|565369411|ref|XP_006351329.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 523

 Score =  528 bits (1359), Expect = e-147
 Identities = 256/434 (58%), Positives = 336/434 (77%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            Y+  I   C++G +D+++ LLS MEA G  PS  SY  ++ ALG  GRT EADA+F+EM 
Sbjct: 88   YNESICELCTEGDVDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTSEADAIFQEML 147

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
             S  +P  + +N LL  FLRKG L +AD+VL+ +    V+ N++TY ILL+ YV++GRLE
Sbjct: 148  CSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILLEYYVSAGRLE 207

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            DTW ++ +M+ +   L+SFVYSKII+LYRDNGMWKKA+ +V E+RE+G+  D R++N +I
Sbjct: 208  DTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLDKRIFNSII 267

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
            DTFGKY +L EA+++FDKMR EG+KPD  TWN LIRWHC+ G L+ A+  F EMQ+QGLY
Sbjct: 268  DTFGKYGELGEALEMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDTAIELFNEMQDQGLY 327

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
            PDPKIF+ II+ L EQGRW  I  + + M+ RG  +SG IY+VLVDIYGQ+G F++AE C
Sbjct: 328  PDPKIFIIIITHLVEQGRWAVIDTILENMQGRGHHKSGAIYAVLVDIYGQHGRFEDAEYC 387

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            + +LK +G+Q+S S+FCVLA+AYAQQGLCEQT+KVLQ+ME +G EPNLIMLN+L+NAF  
Sbjct: 388  LNSLKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIMLNMLINAFGN 447

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKA 1537
            AG+H+EA +++ HIKE GI+PDVITY TLMKAFMRA+K+D+VP IY EME  GCTPDRKA
Sbjct: 448  AGRHMEAQSIYLHIKEMGITPDVITYSTLMKAFMRAKKFDQVPKIYSEMESTGCTPDRKA 507

Query: 1538 REMLHDASLICLQR 1579
            REML  A +I  QR
Sbjct: 508  REMLQSALMILEQR 521


>ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540762|gb|EEF42322.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score =  526 bits (1356), Expect = e-147
 Identities = 256/434 (58%), Positives = 338/434 (77%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            Y+  I   C  G +D+++ LL+ M++ G  PS+ SY  ++  L   GRTLEA+A+++EM 
Sbjct: 24   YNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLEAEALYQEMM 83

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
              G++P  + YN +L GFL+KG L +A+RVL  +   G+  N++TY ILLD  VN+GRLE
Sbjct: 84   CFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLDYNVNAGRLE 143

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            DTW V+ EMK K  +L+SFVYSK+I LYRDNGMWKKA+ ++ E+RE+G+  D  +YN +I
Sbjct: 144  DTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLDKHIYNSII 203

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
            DTFGKY +LDEA++V   M+ +G+ PDI TWN LIRWHC+AG+L +AL  F++MQ QGLY
Sbjct: 204  DTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSKMQAQGLY 263

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
            PDPKI +TIISRL EQG+W+ I+  F  MK  G  +SG IY++LVDIYGQYG FQ+AEEC
Sbjct: 264  PDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYGRFQDAEEC 323

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            ++ALK++GI  SAS+FCVLANAYAQQGLCEQT+KVLQLME +G EPNLIMLN+L+NAF I
Sbjct: 324  ISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLNVLINAFGI 383

Query: 1358 AGKHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKA 1537
            AG+H EA +++ H+KESGISPDV+TY TLMKA++RARK+DEVP IY EME +GCTPD+KA
Sbjct: 384  AGRHREALSIYHHMKESGISPDVVTYSTLMKAYIRARKFDEVPEIYSEMESSGCTPDKKA 443

Query: 1538 REMLHDASLICLQR 1579
            RE+L  A ++  +R
Sbjct: 444  REILQAALMVLGRR 457



 Score = 88.6 bits (218), Expect = 9e-15
 Identities = 73/355 (20%), Positives = 145/355 (40%), Gaps = 35/355 (9%)
 Frame = +2

Query: 569  GVEWNRQTYFILLDSYVNSGRLEDTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKA 748
            G E + ++Y   +      G ++    +L +M++      S  Y+ +I+     G   +A
Sbjct: 16   GQELSGESYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLEA 75

Query: 749  MDLVMEMRELGIVPDVRMYNDMIDTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRW 928
              L  EM   G+ P +++YN M+  F K   L  A +V   +   GL  +  T+ +L+ +
Sbjct: 76   EALYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLDY 135

Query: 929  HCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTES 1108
            +  AG LE       EM+++G   +  ++  +I    + G W     + + ++  GM   
Sbjct: 136  NVNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLD 195

Query: 1109 GIIYSVLVDIYGQYGMFQNAEECVAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQ 1288
              IY+ ++D +G+YG    A E ++ ++ +GI      +  L   + + G   + L++  
Sbjct: 196  KHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFS 255

Query: 1289 LMEDDGTEP------------------NLIMLN-----------------LLMNAFSIAG 1363
             M+  G  P                  N+I  N                 +L++ +   G
Sbjct: 256  KMQAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYG 315

Query: 1364 KHLEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPD 1528
            +  +A      +K  GI P    +C L  A+ +    ++   + + ME  G  P+
Sbjct: 316  RFQDAEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPN 370


>ref|XP_006850860.1| hypothetical protein AMTR_s00025p00142780 [Amborella trichopoda]
            gi|548854531|gb|ERN12441.1| hypothetical protein
            AMTR_s00025p00142780 [Amborella trichopoda]
          Length = 416

 Score =  526 bits (1354), Expect = e-146
 Identities = 253/413 (61%), Positives = 319/413 (77%)
 Frame = +2

Query: 347  MEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMKWSGIRPTSRDYNALLGGFLRKGQ 526
            M A GM+P+  SY  ++ ALG  GRTLEADA+F+EMK  G RP  R YNALL GFLRKG 
Sbjct: 1    MGAVGMQPAINSYACLINALGTVGRTLEADAIFQEMKELGFRPRVRSYNALLKGFLRKGL 60

Query: 527  LLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLEDTWWVLGEMKAKRIRLDSFVYSK 706
              +A +VL+EM +  ++ N++TY +LL+SY  SGRLEDTW +L E+K +     S+VYSK
Sbjct: 61   FKLATKVLMEMEELDIDPNQETYMLLLESYARSGRLEDTWLILKEIKNEGFYASSYVYSK 120

Query: 707  IIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMIDTFGKYDQLDEAVKVFDKMRSEG 886
            +I +YRD+GMWK A+DL+ EM++ G+ PD  +YN +IDTFGKY QLDEAV  F+KM+ EG
Sbjct: 121  LIGIYRDHGMWKNALDLLREMQDNGVSPDRHVYNSVIDTFGKYGQLDEAVDAFEKMKHEG 180

Query: 887  LKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGEQGRWDDIK 1066
              PDI TWN LI+WHC+AG+L +AL F   M E G YPDPKIF+T IS LGE+G+W +I+
Sbjct: 181  FSPDIMTWNSLIKWHCKAGELHQALKFLNRMLECGFYPDPKIFVTFISCLGEEGKWREIR 240

Query: 1067 NLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEECVAALKAKGIQMSASLFCVLANAY 1246
              F+ MK +G  ESGI+Y VLVDIYGQYG FQ+A ECV+A++A+GI+ S  +FC LANAY
Sbjct: 241  RAFEVMKLKGFKESGIVYGVLVDIYGQYGKFQDASECVSAMRAEGIEPSCGVFCALANAY 300

Query: 1247 AQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSIAGKHLEATTVFEHIKESGISPDV 1426
            AQQG+CEQT+ VL+LME +G E NL MLNLL+NAFS AG+H+EA +V EHIKESG+SPDV
Sbjct: 301  AQQGMCEQTVSVLRLMEAEGIEINLTMLNLLINAFSNAGRHMEAVSVLEHIKESGLSPDV 360

Query: 1427 ITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKAREMLHDASLICLQRGG 1585
            +TY TLMKAF RARK+D+V  +Y+EME AGC PDRKAREML +A LI  QR G
Sbjct: 361  VTYSTLMKAFFRARKFDQVQEVYKEMESAGCVPDRKAREMLQNALLILEQRHG 413


>ref|XP_006573837.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Glycine max]
            gi|571436687|ref|XP_006573838.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Glycine max]
            gi|571436689|ref|XP_006573839.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X3 [Glycine max]
          Length = 523

 Score =  522 bits (1344), Expect = e-145
 Identities = 249/422 (59%), Positives = 325/422 (77%)
 Frame = +2

Query: 302  CSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMKWSGIRPTS 481
            C +G LDR++ LLS+MEA G   S+ +Y  ++ ALG  GRT EAD +F+EM   G +P  
Sbjct: 92   CKEGDLDRAMSLLSQMEAKGFHLSSTAYACLIEALGNVGRTSEADMLFKEMICDGYKPKL 151

Query: 482  RDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLEDTWWVLGE 661
              Y +LL GFL+KG L +A+ VL EM   G+  +++TY I LD YV +GRLEDTW  +  
Sbjct: 152  NFYTSLLRGFLKKGLLGLANGVLKEMDYSGIWRSKETYQIFLDYYVGAGRLEDTWSTINV 211

Query: 662  MKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMIDTFGKYDQ 841
            MK K   L+SFVYSK++ +YRDNGMWKKA++++ E+RE GI  D  + N +IDTFGKY +
Sbjct: 212  MKQKGFPLNSFVYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGE 271

Query: 842  LDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLYPDPKIFLT 1021
            LDEA+K+F KM+ EG++P+I TWN LI+WHC+ GD  ++   FT+MQEQGLYPDPKIF+T
Sbjct: 272  LDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLFTDMQEQGLYPDPKIFVT 331

Query: 1022 IISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEECVAALKAKG 1201
            IIS +GEQG+W  IK  F+ MK RG  E G +Y+VLVDIYGQYG FQNA ECV ALK++G
Sbjct: 332  IISCMGEQGKWGIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNARECVQALKSEG 391

Query: 1202 IQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSIAGKHLEAT 1381
            + +S S+FCVLANAYAQQGLCEQ + VLQ+ME +G EPN++MLN+L+NAF  AG+++EA 
Sbjct: 392  VLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAM 451

Query: 1382 TVFEHIKESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAGCTPDRKAREMLHDAS 1561
            +V+ HIKESG+SPDV+TY TLMKAF+RA+K+DEVPIIY+EME   CTPDRKAR+ML  A 
Sbjct: 452  SVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDRCTPDRKARQMLQVAL 511

Query: 1562 LI 1567
            ++
Sbjct: 512  MV 513



 Score =  102 bits (254), Expect = 6e-19
 Identities = 65/278 (23%), Positives = 126/278 (45%)
 Frame = +2

Query: 683  LDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMIDTFGKYDQLDEAVKV 862
            L S + S+ I      G   +AM L+ +M   G       Y  +I+  G   +  EA  +
Sbjct: 79   LSSNLCSQFICECCKEGDLDRAMSLLSQMEAKGFHLSSTAYACLIEALGNVGRTSEADML 138

Query: 863  FDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGE 1042
            F +M  +G KP +  +  L+R   + G L  A G   EM   G++   + +   +     
Sbjct: 139  FKEMICDGYKPKLNFYTSLLRGFLKKGLLGLANGVLKEMDYSGIWRSKETYQIFLDYYVG 198

Query: 1043 QGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEECVAALKAKGIQMSASL 1222
             GR +D  +    MK +G   +  +YS +V IY   GM++ A E +  ++ +GI +   +
Sbjct: 199  AGRLEDTWSTINVMKQKGFPLNSFVYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHI 258

Query: 1223 FCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSIAGKHLEATTVFEHIK 1402
               + + + + G  ++ LK+ + M+ +G  PN++  N L+      G  +++  +F  ++
Sbjct: 259  CNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLFTDMQ 318

Query: 1403 ESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAG 1516
            E G+ PD   + T++       K+  +   +  M+  G
Sbjct: 319  EQGLYPDPKIFVTIISCMGEQGKWGIIKKYFESMKIRG 356



 Score = 88.2 bits (217), Expect = 1e-14
 Identities = 50/243 (20%), Positives = 116/243 (47%)
 Frame = +2

Query: 281  DGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMKW 460
            + +I +    G LD +L L  +M+  G+RP+  ++  ++    + G  +++  +F +M+ 
Sbjct: 260  NSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLFTDMQE 319

Query: 461  SGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLED 640
             G+ P  + +  ++     +G+  +  +    M   G +     Y +L+D Y   G+ ++
Sbjct: 320  QGLYPDPKIFVTIISCMGEQGKWGIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQN 379

Query: 641  TWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMID 820
                +  +K++ + +   ++  +   Y   G+ ++ + ++  M   GI P++ M N +I+
Sbjct: 380  ARECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLIN 439

Query: 821  TFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLYP 1000
             FG   +  EA+ V+  ++  G+ PD+ T+  L++   RA   +     + EM+     P
Sbjct: 440  AFGNAGRYMEAMSVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDRCTP 499

Query: 1001 DPK 1009
            D K
Sbjct: 500  DRK 502



 Score = 83.2 bits (204), Expect = 4e-13
 Identities = 52/214 (24%), Positives = 98/214 (45%)
 Frame = +2

Query: 278 YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
           ++ LI  HC +G   +S HL + M+  G+ P    +  I+  +G  G+       F  MK
Sbjct: 294 WNSLIKWHCKEGDFMKSFHLFTDMQEQGLYPDPKIFVTIISCMGEQGKWGIIKKYFESMK 353

Query: 458 WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
             G +     Y  L+  + + G+   A   +  +  EGV  +   + +L ++Y   G  E
Sbjct: 354 IRGNKEYGAVYAVLVDIYGQYGKFQNARECVQALKSEGVLVSPSIFCVLANAYAQQGLCE 413

Query: 638 DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
               VL  M+A+ I  +  + + +I  + + G + +AM +   ++E G+ PDV  Y  ++
Sbjct: 414 QVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAMSVYHHIKESGVSPDVVTYTTLM 473

Query: 818 DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNML 919
             F +  + DE   ++ +M ++   PD     ML
Sbjct: 474 KAFIRAKKFDEVPIIYKEMENDRCTPDRKARQML 507


>gb|EOY09998.1| Pentatricopeptide repeat-containing protein, putative isoform 2
            [Theobroma cacao]
          Length = 487

 Score =  515 bits (1327), Expect = e-143
 Identities = 248/398 (62%), Positives = 320/398 (80%)
 Frame = +2

Query: 290  IHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMKWSGI 469
            I  +C  G +D ++ L++ MEA G  P++ SYG ++ +LG  GRTLEADA+F+EM   G+
Sbjct: 83   IQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEADALFQEMICLGL 142

Query: 470  RPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLEDTWW 649
            +P  R +N LL GFLRKG L +A +VLV M + GV  N++TY ILLD YVN+GRLEDTW 
Sbjct: 143  KPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYYVNAGRLEDTWM 202

Query: 650  VLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMIDTFG 829
            V+ EMK K I L+SFVYSKII LYRDNGMW+KA+ +V E+RE GI  D ++YN +IDTFG
Sbjct: 203  VVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDRQIYNSIIDTFG 262

Query: 830  KYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLYPDPK 1009
            KY +L EA++VF+KM+ E ++PDITTWN LI+WHC+AGDL +AL  FTEMQEQGLYPDPK
Sbjct: 263  KYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFTEMQEQGLYPDPK 322

Query: 1010 IFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEECVAAL 1189
            IF+++ISRLGE G+WD IK  F+ MK RG  + G IY++LVDIYGQYG FQ+AE C++AL
Sbjct: 323  IFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYGRFQDAEVCISAL 382

Query: 1190 KAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSIAGKH 1369
            K++G+  SAS+FCVLANAYAQQG CEQT+KVLQ+ME +G EPN++MLN+L+NAF IAG+H
Sbjct: 383  KSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNIVMLNVLINAFGIAGRH 442

Query: 1370 LEATTVFEHIKESGISPDVITYCTLMKAFMRARKYDEV 1483
             EA +++ HI++SGISPDVITY TLMKAF+RA+K+D V
Sbjct: 443  EEALSIYHHIRDSGISPDVITYSTLMKAFIRAKKFDRV 480



 Score =  124 bits (310), Expect = 2e-25
 Identities = 91/372 (24%), Positives = 166/372 (44%)
 Frame = +2

Query: 278  YDGLIHSHCSKGRLDRSLHLLSRMEAAGMRPSAASYGRIVFALGRTGRTLEADAVFREMK 457
            ++ L+     KG L  ++ +L  M+  G+  +  +Y  ++      GR  +   V  EMK
Sbjct: 149  FNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYYVNAGRLEDTWMVVNEMK 208

Query: 458  WSGIRPTSRDYNALLGGFLRKGQLLMADRVLVEMSKEGVEWNRQTYFILLDSYVNSGRLE 637
              GI   S  Y+ ++  +   G    A  ++ E+ ++G+  +RQ Y  ++D++   G L 
Sbjct: 209  EKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDRQIYNSIIDTFGKYGELS 268

Query: 638  DTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMI 817
            +   V  +MK + IR D   ++ +I+ +   G   KA++L  EM+E G+ PD +++  +I
Sbjct: 269  EALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFTEMQEQGLYPDPKIFMSLI 328

Query: 818  DTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLY 997
               G+  + D   K F+ M+S G              H   G                  
Sbjct: 329  SRLGELGKWDIIKKNFENMKSRG--------------HQDVG------------------ 356

Query: 998  PDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEEC 1177
                I+  ++   G+ GR+ D +     +K  G+  S  ++ VL + Y Q G  +   + 
Sbjct: 357  ---AIYAILVDIYGQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKV 413

Query: 1178 VAALKAKGIQMSASLFCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSI 1357
            +  ++A+GI+ +  +  VL NA+   G  E+ L +   + D G  P++I  + LM AF  
Sbjct: 414  LQIMEAEGIEPNIVMLNVLINAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLMKAFIR 473

Query: 1358 AGKHLEATTVFE 1393
            A K     TV E
Sbjct: 474  AKKFDRVVTVIE 485



 Score =  108 bits (270), Expect = 8e-21
 Identities = 69/278 (24%), Positives = 134/278 (48%)
 Frame = +2

Query: 683  LDSFVYSKIIKLYRDNGMWKKAMDLVMEMRELGIVPDVRMYNDMIDTFGKYDQLDEAVKV 862
            L S ++++ I+ Y   G    AM LV  M  +G  P+   Y  +I++ G   +  EA  +
Sbjct: 74   LTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEADAL 133

Query: 863  FDKMRSEGLKPDITTWNMLIRWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGE 1042
            F +M   GLKP I  +N+L++   R G L  A+     M E+G+  + + +  ++     
Sbjct: 134  FQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYYVN 193

Query: 1043 QGRWDDIKNLFKGMKYRGMTESGIIYSVLVDIYGQYGMFQNAEECVAALKAKGIQMSASL 1222
             GR +D   +   MK +G+  +  +YS ++ +Y   GM++ A   V  ++ KGI +   +
Sbjct: 194  AGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDRQI 253

Query: 1223 FCVLANAYAQQGLCEQTLKVLQLMEDDGTEPNLIMLNLLMNAFSIAGKHLEATTVFEHIK 1402
            +  + + + + G   + L+V + M+ +   P++   N L+     AG   +A  +F  ++
Sbjct: 254  YNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFTEMQ 313

Query: 1403 ESGISPDVITYCTLMKAFMRARKYDEVPIIYREMERAG 1516
            E G+ PD   + +L+       K+D +   +  M+  G
Sbjct: 314  EQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRG 351



 Score = 97.8 bits (242), Expect = 1e-17
 Identities = 74/344 (21%), Positives = 152/344 (44%)
 Frame = +2

Query: 560  SKEGVEWNRQTYFILLDSYVNSGRLEDTWWVLGEMKAKRIRLDSFVYSKIIKLYRDNGMW 739
            S  G E   + +   +  Y   G +++   ++  M+A     +S  Y  +I+     G  
Sbjct: 68   SNSGEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRT 127

Query: 740  KKAMDLVMEMRELGIVPDVRMYNDMIDTFGKYDQLDEAVKVFDKMRSEGLKPDITTWNML 919
             +A  L  EM  LG+ P +R++N ++  F +   L  AVKV   M   G+  +  T+ +L
Sbjct: 128  LEADALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEIL 187

Query: 920  IRWHCRAGDLERALGFFTEMQEQGLYPDPKIFLTIISRLGEQGRWDDIKNLFKGMKYRGM 1099
            + ++  AG LE       EM+E+G++ +  ++  II    + G W     + + ++ +G+
Sbjct: 188  LDYYVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGI 247

Query: 1100 TESGIIYSVLVDIYGQYGMFQNAEECVAALKAKGIQMSASLFCVLANAYAQQGLCEQTLK 1279
            +    IY+ ++D +G+YG    A E    +K + I+   + +  L   + + G   + L+
Sbjct: 248  SLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALE 307

Query: 1280 VLQLMEDDGTEPNLIMLNLLMNAFSIAGKHLEATTVFEHIKESGISPDVITYCTLMKAFM 1459
            +   M++ G  P+  +   L++     GK       FE++K  G       Y  L+  + 
Sbjct: 308  LFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYG 367

Query: 1460 RARKYDEVPIIYREMERAGCTPDRKAREMLHDASLICLQRGGFS 1591
            +  ++ +  +         C    K+  +L  AS+ C+    ++
Sbjct: 368  QYGRFQDAEV---------CISALKSEGLLPSASMFCVLANAYA 402