BLASTX nr result
ID: Zingiber23_contig00020830
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber23_contig00020830 (1782 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004961565.1| PREDICTED: multisubstrate pseudouridine synt... 525 e-146 gb|AFW82437.1| hypothetical protein ZEAMMB73_597944 [Zea mays] 520 e-145 ref|NP_001146470.1| hypothetical protein [Zea mays] gi|219887425... 520 e-145 ref|XP_004961564.1| PREDICTED: multisubstrate pseudouridine synt... 518 e-144 dbj|BAJ90067.1| predicted protein [Hordeum vulgare subsp. vulgare] 517 e-144 ref|XP_003568149.1| PREDICTED: pseudouridylate synthase 7 homolo... 514 e-143 gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [... 509 e-141 ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt... 508 e-141 ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric... 503 e-139 ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synt... 501 e-139 ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt... 500 e-139 ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g... 500 e-139 ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu... 499 e-138 ref|XP_006604840.1| PREDICTED: multisubstrate pseudouridine synt... 496 e-137 ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt... 496 e-137 ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synt... 493 e-136 gb|EOY11113.1| Pseudouridine synthase family protein, putative i... 492 e-136 ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C... 488 e-135 gb|EMJ09385.1| hypothetical protein PRUPE_ppa020985mg [Prunus pe... 486 e-134 ref|XP_006300094.1| hypothetical protein CARUB_v10016322mg [Caps... 483 e-133 >ref|XP_004961565.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2 [Setaria italica] Length = 685 Score = 525 bits (1351), Expect = e-146 Identities = 267/443 (60%), Positives = 325/443 (73%), Gaps = 3/443 (0%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FK +A RL+ LN+R+FGIKVG+FCYV EGLVLGQL GN FTITLRG+ A+SED+IK Sbjct: 251 QVTVFKVQANRLAALNNRLFGIKVGNFCYVKEGLVLGQLMGNQFTITLRGVIAESEDVIK 310 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 A D L +NGFINYYGLQRFGSGS+PTHLVGAALL+GEWK A +LILDPREGER + E Sbjct: 311 AAADGLGKNGFINYYGLQRFGSGSIPTHLVGAALLRGEWKAAVNLILDPREGERDDINEV 370 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 R++YKEHGD+D L+ PRHLVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSY Sbjct: 371 RKHYKEHGDIDKALRNFPRHLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSY 430 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCKEVLPTVCDSSE-HEXXXXXXXXXXXXXXXXXXX 772 LWNHAASMRV+KYG+SQVV GDLV KE P S + E Sbjct: 431 LWNHAASMRVEKYGMSQVVEGDLVYNKESPPEESTSVDIAETDDGHTNSSEIDLCSEAQP 490 Query: 773 XXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESV 952 +Q VK VDS DLLKG YTF+DVVLPLPGS+ +P N++A +YH++AKKDGI+L E+ Sbjct: 491 EETIQSVKIVDSGDLLKGMYTFDDVVLPLPGSQAMFPGNEVAEIYHEMAKKDGISLMENA 550 Query: 953 HGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHV 1132 HG KEFSI+SMKG YR+VFQRPIDF WEL+ YT+D+ LAETDL++L + NE+ Sbjct: 551 HGVKEFSITSMKGGYRRVFQRPIDFQWELMTYTDDSSSLAETDLDVLSRIKPKEANEL-- 608 Query: 1133 DGICSSQIRTSDTENSIGMHLDEDSNENPLSTIET--INSSDILSKKQALKMAFTLPTSC 1306 + T +++ + D + N ++E S D +K A+K+ FTLP SC Sbjct: 609 -------VTTDQSQDKLEKDSDTSTPTNGSDSLENKPTGSPDTAPRKMAIKLVFTLPASC 661 Query: 1307 YATMAIREILKSSTSVSYHKALN 1375 YATMAIRE+LK+STSV+Y K L+ Sbjct: 662 YATMAIRELLKTSTSVAYQKTLS 684 >gb|AFW82437.1| hypothetical protein ZEAMMB73_597944 [Zea mays] Length = 653 Score = 520 bits (1339), Expect = e-145 Identities = 272/446 (60%), Positives = 322/446 (72%), Gaps = 6/446 (1%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FK +A +L LN R+FGIKVG+FCYV EGLVLGQLTGN FTITLRG++A+SED+IK Sbjct: 220 QVTVFKVQASKLLALNKRLFGIKVGNFCYVKEGLVLGQLTGNRFTITLRGVTAESEDMIK 279 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 A D L +NGFINYYGLQRFGSGS+PTHLVGAALL+GEWK A +LILDPREGER + E Sbjct: 280 IAVDGLGKNGFINYYGLQRFGSGSIPTHLVGAALLRGEWKVAVNLILDPREGERDDINEV 339 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 R+ YKEHGD+D+ L+ PRHLVAER+ILQCLKK PGN+LQALK IPRTLRMMYVHSYQSY Sbjct: 340 RKRYKEHGDIDMALRNFPRHLVAERAILQCLKKCPGNHLQALKGIPRTLRMMYVHSYQSY 399 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCKEVLPTVCDSSEH------EXXXXXXXXXXXXXX 757 LWNHAASMRV+KYGISQVV GDLV KE C S E E Sbjct: 400 LWNHAASMRVEKYGISQVVEGDLVYNKE-----CPSEESTSVDILETDDDHTNSIEIDLC 454 Query: 758 XXXXXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGIT 937 +Q K VDS D KG YTF+DVVLPLPGS+ +P N+IA +YH++A+KDGI+ Sbjct: 455 SEAQPEESIQSAKIVDSGDFTKGIYTFDDVVLPLPGSQALFPGNEIAEIYHEMARKDGIS 514 Query: 938 LTESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQ 1117 LTE+ HG KEFSI+SMKG YR+VFQRPI F WEL+ YT+D LAETDL++L + Sbjct: 515 LTENAHGVKEFSITSMKGGYRRVFQRPIGFEWELITYTDDTSSLAETDLDVLSRTKPKEA 574 Query: 1118 NEVHVDGICSSQIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLP 1297 NE + S Q E + + + N S + I S DI KK ALK+AFTLP Sbjct: 575 NE-----LISKQESQDKLEKAPDTSVPTNGNS---SQEKLIGSPDIRPKKLALKLAFTLP 626 Query: 1298 TSCYATMAIREILKSSTSVSYHKALN 1375 TSCYATMAIRE+LK+STSV+Y K L+ Sbjct: 627 TSCYATMAIRELLKTSTSVAYQKTLS 652 >ref|NP_001146470.1| hypothetical protein [Zea mays] gi|219887425|gb|ACL54087.1| unknown [Zea mays] gi|413949796|gb|AFW82445.1| hypothetical protein ZEAMMB73_396305 [Zea mays] Length = 682 Score = 520 bits (1339), Expect = e-145 Identities = 272/446 (60%), Positives = 322/446 (72%), Gaps = 6/446 (1%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FK +A +L LN R+FGIKVG+FCYV EGLVLGQLTGN FTITLRG++A+SED+IK Sbjct: 249 QVTVFKVQASKLLALNKRLFGIKVGNFCYVKEGLVLGQLTGNRFTITLRGVTAESEDMIK 308 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 A D L +NGFINYYGLQRFGSGS+PTHLVGAALL+GEWK A +LILDPREGER + E Sbjct: 309 IAVDGLGKNGFINYYGLQRFGSGSIPTHLVGAALLRGEWKVAVNLILDPREGERDDINEV 368 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 R+ YKEHGD+D+ L+ PRHLVAER+ILQCLKK PGN+LQALK IPRTLRMMYVHSYQSY Sbjct: 369 RKRYKEHGDIDMALRNFPRHLVAERAILQCLKKCPGNHLQALKGIPRTLRMMYVHSYQSY 428 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCKEVLPTVCDSSEH------EXXXXXXXXXXXXXX 757 LWNHAASMRV+KYGISQVV GDLV KE C S E E Sbjct: 429 LWNHAASMRVEKYGISQVVEGDLVYNKE-----CPSEESTSVDILETDDDHTNSIEIDLC 483 Query: 758 XXXXXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGIT 937 +Q K VDS D KG YTF+DVVLPLPGS+ +P N+IA +YH++A+KDGI+ Sbjct: 484 SEAQPEESIQSAKIVDSGDFTKGIYTFDDVVLPLPGSQALFPGNEIAEIYHEMARKDGIS 543 Query: 938 LTESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQ 1117 LTE+ HG KEFSI+SMKG YR+VFQRPI F WEL+ YT+D LAETDL++L + Sbjct: 544 LTENAHGVKEFSITSMKGGYRRVFQRPIGFEWELITYTDDTSSLAETDLDVLSRTKPKEA 603 Query: 1118 NEVHVDGICSSQIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLP 1297 NE + S Q E + + + N S + I S DI KK ALK+AFTLP Sbjct: 604 NE-----LISKQESQDKLEKAPDTSVPTNGNS---SQEKLIGSPDIRPKKLALKLAFTLP 655 Query: 1298 TSCYATMAIREILKSSTSVSYHKALN 1375 TSCYATMAIRE+LK+STSV+Y K L+ Sbjct: 656 TSCYATMAIRELLKTSTSVAYQKTLS 681 >ref|XP_004961564.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1 [Setaria italica] Length = 686 Score = 518 bits (1333), Expect = e-144 Identities = 264/436 (60%), Positives = 320/436 (73%), Gaps = 3/436 (0%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FK +A RL+ LN+R+FGIKVG+FCYV EGLVLGQL GN FTITLRG+ A+SED+IK Sbjct: 251 QVTVFKVQANRLAALNNRLFGIKVGNFCYVKEGLVLGQLMGNQFTITLRGVIAESEDVIK 310 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 A D L +NGFINYYGLQRFGSGS+PTHLVGAALL+GEWK A +LILDPREGER + E Sbjct: 311 AAADGLGKNGFINYYGLQRFGSGSIPTHLVGAALLRGEWKAAVNLILDPREGERDDINEV 370 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 R++YKEHGD+D L+ PRHLVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSY Sbjct: 371 RKHYKEHGDIDKALRNFPRHLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSY 430 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCKEVLPTVCDSSE-HEXXXXXXXXXXXXXXXXXXX 772 LWNHAASMRV+KYG+SQVV GDLV KE P S + E Sbjct: 431 LWNHAASMRVEKYGMSQVVEGDLVYNKESPPEESTSVDIAETDDGHTNSSEIDLCSEAQP 490 Query: 773 XXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESV 952 +Q VK VDS DLLKG YTF+DVVLPLPGS+ +P N++A +YH++AKKDGI+L E+ Sbjct: 491 EETIQSVKIVDSGDLLKGMYTFDDVVLPLPGSQAMFPGNEVAEIYHEMAKKDGISLMENA 550 Query: 953 HGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHV 1132 HG KEFSI+SMKG YR+VFQRPIDF WEL+ YT+D+ LAETDL++L + NE+ Sbjct: 551 HGVKEFSITSMKGGYRRVFQRPIDFQWELMTYTDDSSSLAETDLDVLSRIKPKEANEL-- 608 Query: 1133 DGICSSQIRTSDTENSIGMHLDEDSNENPLSTIET--INSSDILSKKQALKMAFTLPTSC 1306 + T +++ + D + N ++E S D +K A+K+ FTLP SC Sbjct: 609 -------VTTDQSQDKLEKDSDTSTPTNGSDSLENKPTGSPDTAPRKMAIKLVFTLPASC 661 Query: 1307 YATMAIREILKSSTSV 1354 YATMAIRE+LK+STSV Sbjct: 662 YATMAIRELLKTSTSV 677 >dbj|BAJ90067.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 700 Score = 517 bits (1331), Expect = e-144 Identities = 262/442 (59%), Positives = 326/442 (73%), Gaps = 2/442 (0%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FK A +++ LN R++GIKVG+FCYV EGL LGQL GN FTITLRG+ A+SED+IK Sbjct: 259 QVTVFKVPANKIAALNKRLYGIKVGNFCYVKEGLGLGQLMGNRFTITLRGVVAESEDMIK 318 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 A D L +NGFINYYGLQRFGSGSVPTHL+GAALL+GEWK+A L+LDPREGER ++E Sbjct: 319 AAVDGLGKNGFINYYGLQRFGSGSVPTHLIGAALLRGEWKSAVHLVLDPREGERDDIKEV 378 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 RE+YK+HGD+D+ L+ PRHLVAE++ILQCL+K PGNYLQALK IPR LRMMYVH+YQSY Sbjct: 379 REHYKQHGDIDMALRNFPRHLVAEKAILQCLRKCPGNYLQALKGIPRPLRMMYVHAYQSY 438 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCKEVLPTVCDSSEHEXXXXXXXXXXXXXXXXXXXX 775 LWNHAASMRV+KYGISQV+ GDLV KE P S Sbjct: 439 LWNHAASMRVEKYGISQVIEGDLVYTKESHPGEATSVGTSEVDSLTNASEIDICLEALPE 498 Query: 776 XXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVH 955 +Q VK VDSEDL KG Y+FEDVVLPLPGS+ +P N++A +YH++AKKDGI+LTE+ H Sbjct: 499 ENIQSVKLVDSEDLTKGIYSFEDVVLPLPGSQALFPGNEVAQIYHEMAKKDGISLTENAH 558 Query: 956 GAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHVD 1135 G KEFSI+SMKG YR+VFQ+PIDF WEL+ YT+D+ LAETDL+IL K +T+ +V + Sbjct: 559 GVKEFSITSMKGGYRRVFQKPIDFEWELMTYTDDSASLAETDLDILSK-GKLTEAKVANE 617 Query: 1136 GICSSQIRTSDTENSIGMHLDEDSNENPLSTIE--TINSSDILSKKQALKMAFTLPTSCY 1309 S ++ + + L+ + S +E +I SSD L K A+K+AFTLP S Y Sbjct: 618 PAPSGNSASNPPDCKLEEPLETSMPTSETSLVENKSIGSSDTLPSKLAVKLAFTLPASSY 677 Query: 1310 ATMAIREILKSSTSVSYHKALN 1375 ATMAIRE+LK STSV+Y K L+ Sbjct: 678 ATMAIRELLKDSTSVAYQKTLD 699 >ref|XP_003568149.1| PREDICTED: pseudouridylate synthase 7 homolog [Brachypodium distachyon] Length = 693 Score = 514 bits (1323), Expect = e-143 Identities = 268/447 (59%), Positives = 327/447 (73%), Gaps = 7/447 (1%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FK A +L+ LN R+FGIKVG+FCYV EGL LGQL GN FTITLRG+ A+SE +IK Sbjct: 252 QVTVFKVPANKLAALNKRLFGIKVGNFCYVKEGLGLGQLMGNRFTITLRGVVAESEGVIK 311 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 A DSL +NGFINYYGLQRFGS SVPTHLVG+ALL+GEWKTA LILDPREGER +++ Sbjct: 312 AAVDSLGKNGFINYYGLQRFGSSSVPTHLVGSALLRGEWKTAVKLILDPREGERDDIKKV 371 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 RE+YKEHGD+D+ L+ PRHLVAE++ILQCL+K P NYLQALK IPRTLRMMYVHSYQSY Sbjct: 372 REHYKEHGDIDMALRNFPRHLVAEKAILQCLRKCPENYLQALKGIPRTLRMMYVHSYQSY 431 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCKEVLPTVCDS-SEHEXXXXXXXXXXXXXXXXXXX 772 LWNHAASMRVQKYGISQV+ GDL+ KE P S E Sbjct: 432 LWNHAASMRVQKYGISQVIEGDLIYSKESHPGEATSVGTSETDDDHANSSEIDICSETLP 491 Query: 773 XXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESV 952 +Q VK VDSEDLLKG Y+FEDVVLPLPGS+ +P N++A +YH++AKKDGI+LT S Sbjct: 492 EENIQSVKIVDSEDLLKGIYSFEDVVLPLPGSQALFPGNEVAEIYHEMAKKDGISLTGSA 551 Query: 953 HGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKA--ANMTQNEV 1126 HG KEFSI++MKG+YR+VFQRPIDF WEL+ YT+++ LAETD++IL K NE Sbjct: 552 HGVKEFSITNMKGSYRRVFQRPIDFEWELMKYTDESASLAETDMDILSKVKLTEAKANEP 611 Query: 1127 HVDGICSSQIR----TSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTL 1294 G+ +S+ S +ENS+ ++E L ++ SSDI K A+K+AFTL Sbjct: 612 GSSGVSNSKPADCKLESPSENSM------PTSETSLGENKSNGSSDISPSKLAVKLAFTL 665 Query: 1295 PTSCYATMAIREILKSSTSVSYHKALN 1375 P S YATMAIRE+LK+ TSV+Y K L+ Sbjct: 666 PASTYATMAIRELLKNPTSVAYQKTLD 692 >gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao] Length = 732 Score = 509 bits (1311), Expect = e-141 Identities = 266/458 (58%), Positives = 328/458 (71%), Gaps = 18/458 (3%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FKQ A RL+ LN R+ GIKVGDFCYV + +LGQL GN FTI LRGI ADSE+ IK Sbjct: 276 RVTVFKQHASRLAALNERLIGIKVGDFCYVKDDFLLGQLLGNRFTIILRGIVADSEETIK 335 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 + +SL R+GFINY+GLQRFGSGS+PTH +GA LL+GEW+ AAS ILDPREGER V +A Sbjct: 336 ASVESLGRHGFINYFGLQRFGSGSIPTHRIGATLLRGEWQAAASTILDPREGERDFVSKA 395 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 REYYKE GD++ TL++LPRHLVAER++LQCLKK PGNYLQALK IPRTLRMMYVHSYQSY Sbjct: 396 REYYKETGDIEGTLRQLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSY 455 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCK-------EVLPTVCDSSEHEXXXXXXXXXXXXX 754 LWNHAASMRV+KYG ++VVLGDLV CK +V+P+ + + E Sbjct: 456 LWNHAASMRVEKYGSNEVVLGDLVYCKGNDAEKVKVVPSEHEDNNFEDAYDCSQLDEISG 515 Query: 755 XXXXXXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGI 934 VKA+ + D+ G+YT EDVVLP+PGSRI YP NDIANVYHD+AKKDGI Sbjct: 516 TDLPEGKN--NLVKAITAADISTGNYTIEDVVLPMPGSRIIYPVNDIANVYHDMAKKDGI 573 Query: 935 TLTESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKA--AN 1108 +LTESVH KEFSI+SM G+YR+VFQ+PIDF WEL+ YT+ ++ L+ETDL+ + K N Sbjct: 574 SLTESVHNIKEFSITSMTGSYRRVFQKPIDFEWELLSYTDGSIALSETDLDKIAKTKPVN 633 Query: 1109 MTQNEVHVDGICSS---------QIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILS 1261 + + E DG + D + S G E S E I ++ S+ L Sbjct: 634 LVKEEKPTDGTEGQDSSDHMEHIESFEDDKKFSTGNVEVEGSREAEPPQIHSLPESNSLG 693 Query: 1262 KKQALKMAFTLPTSCYATMAIREILKSSTSVSYHKALN 1375 ++ALK+AFTLP SCYATMAIRE+LK+STSV++HK LN Sbjct: 694 TQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTLN 731 >ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis vinifera] Length = 694 Score = 508 bits (1309), Expect = e-141 Identities = 270/459 (58%), Positives = 324/459 (70%), Gaps = 19/459 (4%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FKQ A RL+ LN R+ GIKVGDFC+V EGLVLGQL GN FTITLRG+ ADSE+ IK Sbjct: 235 RVTVFKQHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIK 294 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 + D+L R GFINY+GLQRFGSGSVPTHL+GAALL+GEW+TA SLILDPREGER +R+A Sbjct: 295 ASADALGRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGERDAIRKA 354 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 REYYKE D++ TL++ PRHLVAER+ILQCLKK+PGNYLQALK IPRTLRMMYVHSYQSY Sbjct: 355 REYYKESDDIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSY 414 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCK----EVLPTVCDSSEHEXXXXXXXXXXXXXXXX 763 LWNHAASMRVQ YG QVVLGDLV CK E + V +S + Sbjct: 415 LWNHAASMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEIS 474 Query: 764 XXXXXXVQF--VKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGIT 937 + VKA+D+EDLL G+YT +DVVLPLPGSR YPTNDIA VYHD AKKD I+ Sbjct: 475 ETDLPEERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAIS 534 Query: 938 LTESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETD---------LNI 1090 LTES H KEFSI++M G +R+VFQ+PIDF WEL+ YT N+PLAETD NI Sbjct: 535 LTESAHSVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNI 594 Query: 1091 LEKAANMTQNEVHVDGICSSQIRTSDTENSIGMHLDEDS----NENPLSTIETINSSDIL 1258 + + NE C Q + E+++ + D + E L +E S Sbjct: 595 IGGEDSRNGNEKENSFQCMKQ--SESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAP 652 Query: 1259 SKKQALKMAFTLPTSCYATMAIREILKSSTSVSYHKALN 1375 ++ALK++FTLP SCYATMAIRE+LK+STSV++ K LN Sbjct: 653 EAQRALKLSFTLPASCYATMAIRELLKTSTSVAFQKTLN 691 >ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis] gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase d, putative [Ricinus communis] Length = 753 Score = 503 bits (1294), Expect = e-139 Identities = 262/465 (56%), Positives = 327/465 (70%), Gaps = 25/465 (5%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FKQ A RL+ LN R+ GIKVGDFCYVNEGL+LGQL GN FT+TLRG+ ADSED IK Sbjct: 288 RVTVFKQHASRLAALNDRLIGIKVGDFCYVNEGLLLGQLLGNRFTVTLRGVVADSEDTIK 347 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPI---- 403 + DSL R+GFINY+GLQRFGSGSVPTHL+GAALL+GEWK A S+ILDPREG+ + Sbjct: 348 GSADSLGRHGFINYFGLQRFGSGSVPTHLIGAALLRGEWKYAVSMILDPREGDILLLVIC 407 Query: 404 ---VREAREYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMY 574 +R AREYYKE D+D TL++LPR+L AER++LQCLKK PGNYLQALK IPRTLRMMY Sbjct: 408 FMWMRMAREYYKESDDIDGTLRQLPRYLTAERAVLQCLKKCPGNYLQALKAIPRTLRMMY 467 Query: 575 VHSYQSYLWNHAASMRVQKYGISQVVLGDLVLCK------EV--LPTVCDSSE-HEXXXX 727 VHSYQSYLWNHAASMRVQKYG QVV+GDLV CK E+ + C+ + + Sbjct: 468 VHSYQSYLWNHAASMRVQKYGTDQVVVGDLVYCKGDDTEREIGSANSACEDDDCEDMYGC 527 Query: 728 XXXXXXXXXXXXXXXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVY 907 V+ +AV++EDL G+YT DV+LP+PGSR+ YPTNDIA VY Sbjct: 528 SNLDETSGTDLSERKDTLVKVEQAVNAEDLSTGNYTINDVILPMPGSRVSYPTNDIAKVY 587 Query: 908 HDLAKKDGITLTESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLN 1087 HDLA+KD I L ESVH AKEFSI+SM G+YR+VFQ+P+DF WE++ YT+ PLAETD+ Sbjct: 588 HDLAEKDAINLAESVHSAKEFSITSMTGSYRRVFQKPMDFEWEILSYTDGTTPLAETDME 647 Query: 1088 ILEKAANM--------TQNEVHVDGICSSQIRTSDTENSIGMHLD-EDSNENPLSTIETI 1240 L KA ++ +N+ C Q +S + + + E E ++ +E + Sbjct: 648 KLAKAKSIELNKEEETKKNDTKSPSDCMRQPMSSGNDLHLSAEYNREGEREVEVAKVEPL 707 Query: 1241 NSSDILSKKQALKMAFTLPTSCYATMAIREILKSSTSVSYHKALN 1375 + + ALK+ FTLP SCYATMAIRE+LK+STSV++HK LN Sbjct: 708 YGPNTRGAQTALKLTFTLPASCYATMAIRELLKTSTSVAFHKTLN 752 >ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine max] Length = 690 Score = 501 bits (1291), Expect = e-139 Identities = 261/453 (57%), Positives = 324/453 (71%), Gaps = 13/453 (2%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT++KQRA RL+ LN R+FGIK+GDFCYV EGL LGQL GN FTITLRGI ADSEDIIK Sbjct: 239 RVTVYKQRASRLASLNKRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIK 298 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 + D+L R+GFINY+GLQRFGSGS+PTHL+GAALL+GEWK A +ILDPR+GE+ + +A Sbjct: 299 ASADALGRHGFINYFGLQRFGSGSLPTHLIGAALLQGEWKLAVDMILDPRDGEKSAIAKA 358 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 R+YYKE DV TLK+LPR+LVAER++LQ LK PGNYLQALK+IPRTLRM+YVHSYQSY Sbjct: 359 RKYYKESSDVVGTLKQLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSY 418 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCKEVLP---TVCDSSEHEXXXXXXXXXXXXXXXXX 766 LWNHAAS RVQKYG VVLGDLV CKE T SE+ Sbjct: 419 LWNHAASKRVQKYGTENVVLGDLVYCKENSTGKVTESVGSEYAEDCSGRYDSNNEDEISG 478 Query: 767 XXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTE 946 + VK VD EDL G+YT +DV+LP+PGSRI+YPTN IANVY DLAKKDGI+LTE Sbjct: 479 EIHEEIDSVKVVDVEDLNSGYYTIDDVILPMPGSRIKYPTNHIANVYEDLAKKDGISLTE 538 Query: 947 SVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANM----- 1111 SVH ++FSI+S+ G YR+VFQ+PI+F WEL+ Y++ N L ETDL+ + K+ M Sbjct: 539 SVHNVEDFSITSITGCYRRVFQKPINFEWELLTYSDSNKQLVETDLDKVNKSKPMGTVKQ 598 Query: 1112 -----TQNEVHVDGICSSQIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQAL 1276 +NE D C ++ +S+ + + + E L E+++ S + AL Sbjct: 599 MGAANGKNEEAFD--CIRELESSNDVVKVENYSEIAGEEIKLPHDESLSGSSSQDSQIAL 656 Query: 1277 KMAFTLPTSCYATMAIREILKSSTSVSYHKALN 1375 K++FTLP SCYATMAIRE+LK+STSV+YHK LN Sbjct: 657 KLSFTLPASCYATMAIRELLKTSTSVAYHKTLN 689 >ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1 [Citrus sinensis] Length = 739 Score = 500 bits (1288), Expect = e-139 Identities = 263/457 (57%), Positives = 323/457 (70%), Gaps = 17/457 (3%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FKQRA +L+ LN R+ GI++GDFCYV EGL+LGQL GN FTITLRG+ DSED+IK Sbjct: 283 RVTVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIK 342 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 + +SL RNGFINY+GLQRFGSGSVPTHLVGA LL+GEWK+A +ILDPREGER + +A Sbjct: 343 ASANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGERNEISKA 402 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 REYYKE D+D TL+KLPRHLVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQS+ Sbjct: 403 REYYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSF 462 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCK-----EVLPTVCDSSEHE-XXXXXXXXXXXXXX 757 LWNHAAS RVQK+G VV+GDLV CK + L V E+E Sbjct: 463 LWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVP 522 Query: 758 XXXXXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGIT 937 VK V +ED+ G YT +DVVLPLPGSR+ YP ND+A VYH LA+KDGI Sbjct: 523 ETDHPDGRHNLVKTVTAEDINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGIN 582 Query: 938 LTESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNIL--EKAANM 1111 LTES+H KEFSI+SM G YR+VFQ+P+DF WEL+ Y + N PLAETDL+ + +K AN+ Sbjct: 583 LTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANI 642 Query: 1112 TQNEVHVDG-------ICSSQIRTSDTENSIGMHLDED--SNENPLSTIETINSSDILSK 1264 + E V G C Q + + + +E + E +E++ +D K Sbjct: 643 VKEEEAVCGNKKKDPSDCMKQSESLSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGK 702 Query: 1265 KQALKMAFTLPTSCYATMAIREILKSSTSVSYHKALN 1375 + ALK+ TLP+SCYATMAIRE+LK+STSV++HK LN Sbjct: 703 QMALKLGLTLPSSCYATMAIRELLKTSTSVAFHKTLN 739 >ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820 [Arabidopsis thaliana] gi|61742699|gb|AAX55170.1| hypothetical protein At3g04820 [Arabidopsis thaliana] gi|332640619|gb|AEE74140.1| pseudouridine synthase [Arabidopsis thaliana] Length = 715 Score = 500 bits (1288), Expect = e-139 Identities = 269/449 (59%), Positives = 321/449 (71%), Gaps = 9/449 (2%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FKQ+A +L+ LN R+FGIKVGDFC V EGL+LGQL GN FTITLRG+ ADSE+ IK Sbjct: 273 RVTVFKQQASKLAALNKRLFGIKVGDFCNVKEGLLLGQLMGNRFTITLRGVVADSEETIK 332 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 ++ +SL ++GFINY+GLQRFGSGSVPTH VGAALLKGEWK A +ILDPRE ER +V +A Sbjct: 333 QSAESLGKDGFINYFGLQRFGSGSVPTHHVGAALLKGEWKDAVDMILDPRETERHVVNDA 392 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 REYYKE GD+D TL++LPR+LVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSY Sbjct: 393 REYYKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSY 452 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCK-EVLPTVCDS--SEHEXXXXXXXXXXXXXXXXX 766 LWN+AAS+RV+ YG SQVVLGDLV K + + DS SEH Sbjct: 453 LWNNAASLRVKNYGTSQVVLGDLVSTKVDAAKRMVDSLTSEHNESSEEALDCDQVDDTAV 512 Query: 767 XXXXXVQ--FVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITL 940 + VK V EDL G Y+ D+VLPLPGSR+ YP+NDIA +YHDLAKKDGI+L Sbjct: 513 VDLPAERSDLVKVVSIEDLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISL 572 Query: 941 TESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQN 1120 TES+HG KEFSI+SM G YR+VFQ+PIDF WEL+ YT+ N PLAETDL+ + N Sbjct: 573 TESIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRI--PMNKPVE 630 Query: 1121 EVHVDGICSSQIRTSDT----ENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAF 1288 +V + SDT + DSNE T + D + ALKMA Sbjct: 631 KVGSTEEIEDESMKSDTNPHDSGETNLKDQTDSNEAEKDT----GNPDSEQTQMALKMAL 686 Query: 1289 TLPTSCYATMAIREILKSSTSVSYHKALN 1375 TLP+SCYATMAIRE+LK+STSV+YHK LN Sbjct: 687 TLPSSCYATMAIRELLKTSTSVAYHKTLN 715 >ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa] gi|550338143|gb|ERP60572.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa] Length = 752 Score = 499 bits (1284), Expect = e-138 Identities = 257/458 (56%), Positives = 320/458 (69%), Gaps = 18/458 (3%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FKQ+A RL+ LN R+ GIKVGDFC+V EGL+LG+L GN FT+TLRG+ ADSED IK Sbjct: 294 RVTVFKQQASRLAALNDRLIGIKVGDFCHVKEGLLLGRLLGNRFTVTLRGVIADSEDTIK 353 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGE-----RP 400 A DSL R+GFINY+GLQRFG+GSVPTHL+GAALL+GEWKTA S+ILDPREG+ Sbjct: 354 AAADSLGRHGFINYFGLQRFGTGSVPTHLIGAALLRGEWKTAVSMILDPREGDILLLFPY 413 Query: 401 IVREAREYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVH 580 ++R+AREYYKE D++ TL++LPRHLVAER++LQCLKK PG+YLQA+K IPRTLRMMYVH Sbjct: 414 VIRKAREYYKESNDIEGTLRQLPRHLVAERAVLQCLKKCPGDYLQAMKAIPRTLRMMYVH 473 Query: 581 SYQSYLWNHAASMRVQKYGISQVVLGDLVLCK------EVLPTVCDSSEHEXXXXXXXXX 742 YQSYLWNHAAS RVQKYG QV+LGDLV CK E + + ++ Sbjct: 474 GYQSYLWNHAASERVQKYGFDQVLLGDLVYCKGDDSEKETVGVNSECNDDNCDDTYDCSH 533 Query: 743 XXXXXXXXXXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAK 922 VK V ED+ G+YT +DVVLP+PGSR+ +PTN+IA VYHDLAK Sbjct: 534 LDETSGTDLLERKNTLVKVVTVEDMSTGNYTVDDVVLPMPGSRVIFPTNEIAKVYHDLAK 593 Query: 923 KDGITLTESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKA 1102 KD I LTESVH KEFSI+SM G+YR+VFQ+P+DF WEL+ Y + N PLAETDL+ + K Sbjct: 594 KDAINLTESVHRVKEFSITSMTGSYRRVFQKPLDFEWELLTYNDSNKPLAETDLDKISKT 653 Query: 1103 ANMTQNEVHVDGICSSQIRTSD-------TENSIGMHLDEDSNENPLSTIETINSSDILS 1261 + + G SD + NSI + D + E ++ S+ Sbjct: 654 GSTNIIKQEEQGKGDEDNDLSDCTKLPVCSRNSIALSSDTNEESEREVESEQVSGSNWQE 713 Query: 1262 KKQALKMAFTLPTSCYATMAIREILKSSTSVSYHKALN 1375 + ALK++ TLP SCYATMAIRE+LK+STSV+YHK LN Sbjct: 714 TQMALKLSLTLPASCYATMAIRELLKTSTSVAYHKTLN 751 >ref|XP_006604840.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2 [Glycine max] Length = 676 Score = 496 bits (1277), Expect = e-137 Identities = 257/453 (56%), Positives = 323/453 (71%), Gaps = 13/453 (2%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT++KQ+A RL+ LN R+FGIK+GDFCYV EGL LGQL GN FTITLRGI ADSEDIIK Sbjct: 225 RVTVYKQQASRLASLNKRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIK 284 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 + D+L R+GFINY+GLQRFGSGS+PTHL+GAALL+GEWK A +ILDPR+GE+ + +A Sbjct: 285 ASADALGRHGFINYFGLQRFGSGSLPTHLIGAALLRGEWKLAVDMILDPRDGEKSAIAKA 344 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 R+YYKE DV TLK+LPR+LVAER++LQ LK PGNYLQALK+IPRTLRM+YVHSYQSY Sbjct: 345 RKYYKESSDVVGTLKQLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSY 404 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCKEVLP---TVCDSSEHEXXXXXXXXXXXXXXXXX 766 LWNHAAS RVQKYG VVLGDLV CKE T SE+ Sbjct: 405 LWNHAASKRVQKYGTENVVLGDLVYCKENSTGKVTEFVGSEYAEDCRGRYDSNNEDEVSG 464 Query: 767 XXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTE 946 + VK +D+EDL G YT +DV+LP+PGSR++YPTN IANVY DLAKKDGI+LTE Sbjct: 465 EIHEEINSVKVIDAEDLNSGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTE 524 Query: 947 SVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMT---- 1114 SVH ++FSI+S+ G YR+VFQ+PI+F WEL+ Y++ + L +TDL+ + K+ M Sbjct: 525 SVHNVEDFSITSITGCYRRVFQKPINFEWELLSYSDSSEQLVDTDLDKINKSKPMNTVKQ 584 Query: 1115 ------QNEVHVDGICSSQIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQAL 1276 +NE D C ++ +SD + + + E L E++ S + AL Sbjct: 585 MGAANGKNEEAFD--CIRELESSDDIAKVENYSEILGEEVKLPHDESLIGSSSQDSQIAL 642 Query: 1277 KMAFTLPTSCYATMAIREILKSSTSVSYHKALN 1375 K++FTLP SCYATMAIRE+LK+STSV+YHK LN Sbjct: 643 KLSFTLPASCYATMAIRELLKTSTSVAYHKTLN 675 >ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1 [Glycine max] Length = 687 Score = 496 bits (1277), Expect = e-137 Identities = 257/453 (56%), Positives = 323/453 (71%), Gaps = 13/453 (2%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT++KQ+A RL+ LN R+FGIK+GDFCYV EGL LGQL GN FTITLRGI ADSEDIIK Sbjct: 236 RVTVYKQQASRLASLNKRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIK 295 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 + D+L R+GFINY+GLQRFGSGS+PTHL+GAALL+GEWK A +ILDPR+GE+ + +A Sbjct: 296 ASADALGRHGFINYFGLQRFGSGSLPTHLIGAALLRGEWKLAVDMILDPRDGEKSAIAKA 355 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 R+YYKE DV TLK+LPR+LVAER++LQ LK PGNYLQALK+IPRTLRM+YVHSYQSY Sbjct: 356 RKYYKESSDVVGTLKQLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSY 415 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCKEVLP---TVCDSSEHEXXXXXXXXXXXXXXXXX 766 LWNHAAS RVQKYG VVLGDLV CKE T SE+ Sbjct: 416 LWNHAASKRVQKYGTENVVLGDLVYCKENSTGKVTEFVGSEYAEDCRGRYDSNNEDEVSG 475 Query: 767 XXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTE 946 + VK +D+EDL G YT +DV+LP+PGSR++YPTN IANVY DLAKKDGI+LTE Sbjct: 476 EIHEEINSVKVIDAEDLNSGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTE 535 Query: 947 SVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMT---- 1114 SVH ++FSI+S+ G YR+VFQ+PI+F WEL+ Y++ + L +TDL+ + K+ M Sbjct: 536 SVHNVEDFSITSITGCYRRVFQKPINFEWELLSYSDSSEQLVDTDLDKINKSKPMNTVKQ 595 Query: 1115 ------QNEVHVDGICSSQIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQAL 1276 +NE D C ++ +SD + + + E L E++ S + AL Sbjct: 596 MGAANGKNEEAFD--CIRELESSDDIAKVENYSEILGEEVKLPHDESLIGSSSQDSQIAL 653 Query: 1277 KMAFTLPTSCYATMAIREILKSSTSVSYHKALN 1375 K++FTLP SCYATMAIRE+LK+STSV+YHK LN Sbjct: 654 KLSFTLPASCYATMAIRELLKTSTSVAYHKTLN 686 >ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1 [Cicer arietinum] Length = 698 Score = 493 bits (1269), Expect = e-136 Identities = 260/456 (57%), Positives = 319/456 (69%), Gaps = 16/456 (3%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT++KQ+A++L+ LN ++FGIKVGDFCYVNEGL LGQL GN FTITLRGI ADS D IK Sbjct: 245 RVTVYKQQARKLASLNEKLFGIKVGDFCYVNEGLCLGQLLGNRFTITLRGIVADSVDTIK 304 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 A DSL R+GFINY+GLQRFGSGSVPTH +GAAL +GEWK A LILDPR+GER ++ +A Sbjct: 305 AAADSLGRHGFINYFGLQRFGSGSVPTHRIGAALFRGEWKLAVDLILDPRDGERYVIAKA 364 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 R+YYK+ DV TLK+LP+ LVAER++L+ LK+FPGNYLQALK+IPRTLRMMYVHSYQSY Sbjct: 365 RKYYKDTNDVAGTLKQLPQFLVAERAVLKSLKQFPGNYLQALKSIPRTLRMMYVHSYQSY 424 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCKEVLPT----VCDSSEHEXXXXXXXXXXXXXXXX 763 LWNHAAS RVQKYG QVVLGDLV CKE P+ + S + Sbjct: 425 LWNHAASTRVQKYGTEQVVLGDLVYCKENPPSKATEIVGSECDDDCGDIYDSNIEDEIPE 484 Query: 764 XXXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLT 943 VKAV++EDL YT +DV+LP+PGSR YP NDI VY+DL KDGI+LT Sbjct: 485 DIHDKSNSSVKAVNAEDLNSKSYTIDDVILPMPGSRSIYPANDIVKVYNDLTNKDGISLT 544 Query: 944 ESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNE 1123 E+VH AKEFS++S+ G+YR+VFQ+PI+F WEL+ YT+ N PL ETD L+K + Sbjct: 545 ENVHNAKEFSMTSVTGSYRRVFQKPINFEWELLTYTDSNKPLVETD---LDKIGKSKRTN 601 Query: 1124 VHVDGI-----------CSSQIRTSDTENSIGMHLDED-SNENPLSTIETINSSDILSKK 1267 VH G C Q+ +SD + DE+ S E L E++ S Sbjct: 602 VHAVGASNGQKETTAFDCIRQVESSDDGVKVETDYDENASKEVILPHDESVPDSSSKDSH 661 Query: 1268 QALKMAFTLPTSCYATMAIREILKSSTSVSYHKALN 1375 ALK+ FTLP+SCYATMAIRE+LK+STSV+Y K LN Sbjct: 662 TALKLTFTLPSSCYATMAIRELLKTSTSVAYQKTLN 697 >gb|EOY11113.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma cacao] Length = 763 Score = 492 bits (1267), Expect = e-136 Identities = 264/476 (55%), Positives = 328/476 (68%), Gaps = 36/476 (7%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FKQ A RL+ LN R+ GIKVGDFCYV + +LGQL GN FTI LRGI ADSE+ IK Sbjct: 289 RVTVFKQHASRLAALNERLIGIKVGDFCYVKDDFLLGQLLGNRFTIILRGIVADSEETIK 348 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGE------- 394 + +SL R+GFINY+GLQRFGSGS+PTH +GA LL+GEW+ AAS ILDPREG+ Sbjct: 349 ASVESLGRHGFINYFGLQRFGSGSIPTHRIGATLLRGEWQAAASTILDPREGDILSLTFF 408 Query: 395 ------RPIVR-----EAREYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQAL 541 + + R AREYYKE GD++ TL++LPRHLVAER++LQCLKK PGNYLQAL Sbjct: 409 FPFLLGKALFRCLTTQRAREYYKETGDIEGTLRQLPRHLVAERAMLQCLKKCPGNYLQAL 468 Query: 542 KTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGISQVVLGDLVLCK-------EVLPTVCD 700 K IPRTLRMMYVHSYQSYLWNHAASMRV+KYG ++VVLGDLV CK +V+P+ + Sbjct: 469 KAIPRTLRMMYVHSYQSYLWNHAASMRVEKYGSNEVVLGDLVYCKGNDAEKVKVVPSEHE 528 Query: 701 SSEHEXXXXXXXXXXXXXXXXXXXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRY 880 + E VKA+ + D+ G+YT EDVVLP+PGSRI Y Sbjct: 529 DNNFEDAYDCSQLDEISGTDLPEGKN--NLVKAITAADISTGNYTIEDVVLPMPGSRIIY 586 Query: 881 PTNDIANVYHDLAKKDGITLTESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDN 1060 P NDIANVYHD+AKKDGI+LTESVH KEFSI+SM G+YR+VFQ+PIDF WEL+ YT+ + Sbjct: 587 PVNDIANVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFEWELLSYTDGS 646 Query: 1061 LPLAETDLNILEKA--ANMTQNEVHVDGICSS---------QIRTSDTENSIGMHLDEDS 1207 + L+ETDL+ + K N+ + E DG + D + S G E S Sbjct: 647 IALSETDLDKIAKTKPVNLVKEEKPTDGTEGQDSSDHMEHIESFEDDKKFSTGNVEVEGS 706 Query: 1208 NENPLSTIETINSSDILSKKQALKMAFTLPTSCYATMAIREILKSSTSVSYHKALN 1375 E I ++ S+ L ++ALK+AFTLP SCYATMAIRE+LK+STSV++HK LN Sbjct: 707 REAEPPQIHSLPESNSLGTQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTLN 762 >ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis sativus] Length = 719 Score = 488 bits (1257), Expect = e-135 Identities = 255/453 (56%), Positives = 323/453 (71%), Gaps = 13/453 (2%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FKQ A R++ LN R+ GIK+G+F Y+ EGL+LGQL GN FTITLRG+ A+SED+IK Sbjct: 274 RVTVFKQHASRIAALNDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVANSEDVIK 333 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREA 415 + ++L R+GFINY+GLQRFGSGSVPTHLVGA+LL+GEWK A ++ILDPREG+ ++ A Sbjct: 334 ASAEALGRHGFINYFGLQRFGSGSVPTHLVGASLLRGEWKGAVNMILDPREGDILLLMRA 393 Query: 416 REYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSY 595 R+YYKE D+D TLK+LPR+LVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSY Sbjct: 394 RDYYKESDDIDGTLKQLPRYLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSY 453 Query: 596 LWNHAASMRVQKYGISQVVLGDLVLCKE---VLPTVCDSSEHEXXXXXXXXXXXXXXXXX 766 LWNHAASMRVQKYGI +VV+GDLV CKE V +S E+E Sbjct: 454 LWNHAASMRVQKYGIDKVVVGDLVYCKENHTETAAVQNSEEYEDEDCGDANSYDSCHLEE 513 Query: 767 XXXXXV-----QFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDG 931 + + VKAV + D+L G++T +DVVLPLPGSR+ YPTNDIA VY+DLA KD Sbjct: 514 VCKLGLPTERHKLVKAVTAGDVLSGNFTIDDVVLPLPGSRVLYPTNDIAEVYNDLATKDS 573 Query: 932 ITLTESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDL-NILEKAAN 1108 I+LT SVH KEFSI+SM G+YR+VFQRP D+ WEL+ Y + NLPLA++DL N+L+ + Sbjct: 574 ISLTNSVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQSV 633 Query: 1109 MTQNEVHVDGICSSQIRTSDTENSI----GMHLDEDSNENPLSTIETINSSDILSKKQAL 1276 E + ++ T+ S+ + L+ EN N + AL Sbjct: 634 EISKEEKIADKSKNEDSLDSTDQSVCCKKNIQLEAGGKENE-------NGQGTQDPQMAL 686 Query: 1277 KMAFTLPTSCYATMAIREILKSSTSVSYHKALN 1375 K++FTLP S YATMAIRE+LK+STSV++HK LN Sbjct: 687 KLSFTLPASSYATMAIRELLKTSTSVAFHKTLN 719 >gb|EMJ09385.1| hypothetical protein PRUPE_ppa020985mg [Prunus persica] Length = 691 Score = 486 bits (1251), Expect = e-134 Identities = 254/447 (56%), Positives = 320/447 (71%), Gaps = 14/447 (3%) Frame = +2 Query: 56 KVTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIK 235 +VT+FKQ A RL+ LN R+ GIKVGDFCYV EGLVLGQL GN FTITLRG+ ADSED IK Sbjct: 235 RVTVFKQLASRLAALNDRLIGIKVGDFCYVKEGLVLGQLLGNRFTITLRGVVADSEDTIK 294 Query: 236 EATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGE--RPIVR 409 + +L + GFINY+GLQRFGSGSVPTHL+GA LL+GEWK+ SL LDPREG+ ++ Sbjct: 295 ASVIALGKQGFINYFGLQRFGSGSVPTHLIGATLLRGEWKSTVSLFLDPREGDILLMLLG 354 Query: 410 EAREYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQ 589 AREYYKE D++ TL++LPRHLV+E++ILQCLKK PGNYLQALK IPRTLRMMYVHSYQ Sbjct: 355 IAREYYKETNDIEGTLRQLPRHLVSEKAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQ 414 Query: 590 SYLWNHAASMRVQKYGISQVVLGDLVLCK--------EVLPTVCDSSEHEXXXXXXXXXX 745 SYLWNHAASMRVQKYG +VVLGDLV CK EV+ + C + Sbjct: 415 SYLWNHAASMRVQKYGTDRVVLGDLVYCKGNETEKVSEVVSSKC--VDENGNDTLDPIDL 472 Query: 746 XXXXXXXXXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKK 925 + VKAV +ED+L G+YT +DVVLP+PGSR+ +P NDIA+V+HDLAKK Sbjct: 473 DDISGTNLPEERLNLVKAVTAEDILSGNYTIDDVVLPMPGSRVIFPENDIAHVFHDLAKK 532 Query: 926 DGITLTESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAA 1105 D I+LTESVH KEFSI+SM G+YR+VFQ+P+DF WE++ Y + N PL +TD + + K Sbjct: 533 DAISLTESVHNVKEFSITSMTGSYRRVFQKPMDFEWEILKYIDGNKPLVDTDFDKIAKTK 592 Query: 1106 NMTQNEVHVDGICSSQIRTSD-TENSIGMHLDED---SNENPLSTIETINSSDILSKKQA 1273 + NE DG + + S+ +N IG+ D++ + L E++ ++ + A Sbjct: 593 PSSLNE---DGRLHDKTKQSECLDNDIGLQTDDNGAKAKGEELPQAESLCDTNPQETQTA 649 Query: 1274 LKMAFTLPTSCYATMAIREILKSSTSV 1354 LK++FTLP SCYATMAIRE+LK+STSV Sbjct: 650 LKLSFTLPASCYATMAIRELLKTSTSV 676 >ref|XP_006300094.1| hypothetical protein CARUB_v10016322mg [Capsella rubella] gi|482568803|gb|EOA32992.1| hypothetical protein CARUB_v10016322mg [Capsella rubella] Length = 704 Score = 483 bits (1243), Expect = e-133 Identities = 260/444 (58%), Positives = 322/444 (72%), Gaps = 5/444 (1%) Frame = +2 Query: 59 VTIFKQRAKRLSELNSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKE 238 VT+FKQ+A +L+ LN R+FGIKVGDFC+V EGL+LGQL GN FTITLRG+ ADSE+ IK+ Sbjct: 276 VTVFKQQASKLAALNKRLFGIKVGDFCHVKEGLLLGQLMGNRFTITLRGVVADSEETIKK 335 Query: 239 ATDSLWRNGFINYYGLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAR 418 + +SL ++GFINY+GLQRFGSGSVPTH VGAALLKGEWK A R +V +AR Sbjct: 336 SAESLGKDGFINYFGLQRFGSGSVPTHHVGAALLKGEWKDA------ERINAWHVVNDAR 389 Query: 419 EYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYL 598 EYYKE GD+D TL++LPR+LVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSYL Sbjct: 390 EYYKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYL 449 Query: 599 WNHAASMRVQKYGISQVVLGDLVLCK-EVLPTVCDSSEHEXXXXXXXXXXXXXXXXXXXX 775 WN+AAS+RV+KYG SQVVLGDLV K + + D+SEH+ Sbjct: 450 WNNAASLRVKKYGTSQVVLGDLVSTKIDATKKMADTSEHKENNEDALDCDQVDDTAIVDL 509 Query: 776 XXVQ--FVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTES 949 + VK V EDL G Y+ D+VLPLPGSR+ YP+NDIA +YHDLAKKDGI+LT+S Sbjct: 510 PAERSDLVKVVSVEDLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTDS 569 Query: 950 VHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVH 1129 +HG KEFSI+SM G YR+VFQ+PIDF WEL+ YT+ N PLAETDL+ + MT Sbjct: 570 IHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRI----TMT----- 620 Query: 1130 VDGICSSQIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSK--KQALKMAFTLPTS 1303 VD + S++ ++ N I + D N+ + ++ + S+ + ALKMA TLP+S Sbjct: 621 VDKVGSAEEVEDESMNPISNPPETDLNDQTERKDDEKDTGNPNSEQTQMALKMALTLPSS 680 Query: 1304 CYATMAIREILKSSTSVSYHKALN 1375 CYATMAIRE+LK+STSV+YHK LN Sbjct: 681 CYATMAIRELLKTSTSVAYHKTLN 704