BLASTX nr result

ID: Zingiber23_contig00020790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00020790
         (333 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30137.3| unnamed protein product [Vitis vinifera]               58   1e-06
ref|XP_002322894.1| zinc finger family protein [Populus trichoca...    55   1e-05
ref|XP_002326198.1| predicted protein [Populus trichocarpa] gi|5...    55   1e-05

>emb|CBI30137.3| unnamed protein product [Vitis vinifera]
          Length = 120

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 244 MGGKCLSRKVKKRRYSHKTARRAKFLVKDI 155
           MGGKC SRKVKKRRYSHKTARR KFL+KDI
Sbjct: 1   MGGKCPSRKVKKRRYSHKTARRDKFLLKDI 30


>ref|XP_002322894.1| zinc finger family protein [Populus trichocarpa]
           gi|222867524|gb|EEF04655.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 122

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -3

Query: 244 MGGKCLSRKVKKRRYSHKTARRAKFLVK 161
           MGGKC SRKVKKRRYSHKTARR+KFL+K
Sbjct: 1   MGGKCPSRKVKKRRYSHKTARRSKFLLK 28


>ref|XP_002326198.1| predicted protein [Populus trichocarpa]
           gi|566175957|ref|XP_006381409.1| zinc finger family
           protein [Populus trichocarpa]
           gi|118482423|gb|ABK93134.1| unknown [Populus
           trichocarpa] gi|550336112|gb|ERP59206.1| zinc finger
           family protein [Populus trichocarpa]
          Length = 120

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -3

Query: 244 MGGKCLSRKVKKRRYSHKTARRAKFLVK 161
           MGGKC SRKVKKRRYSHKTARR+KFL+K
Sbjct: 1   MGGKCPSRKVKKRRYSHKTARRSKFLLK 28


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