BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00020717
         (252 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryz...    57   3e-06
gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indi...    57   3e-06
gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japo...    57   3e-06
ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group] g...    57   3e-06
ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein...    55   1e-05

>gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryza sativa Japonica
           Group] gi|77556035|gb|ABA98831.1| Plus-3 domain
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|215697432|dbj|BAG91426.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 522

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
 Frame = +3

Query: 3   RMRQQDPDGYRSRLRDLTXXXXXXXXXXXXXXPPRHRSIGMAASPPSDNSNEGESGGRID 182
           RMRQQDP+GYR+R +DL               PPR R    A SPPSD SN+G++ GRI 
Sbjct: 73  RMRQQDPEGYRNRFKDL---------IPQSGSPPRRR----AGSPPSDGSNDGDNRGRIT 119

Query: 183 SE--DDKF 200
            E  DD+F
Sbjct: 120 DETRDDEF 127


>gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indica Group]
          Length = 780

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
 Frame = +3

Query: 3   RMRQQDPDGYRSRLRDLTXXXXXXXXXXXXXXPPRHRSIGMAASPPSDNSNEGESGGRID 182
           RMRQQDP+GYR+R +DL               PPR R    A SPPSD SN+G++ GRI 
Sbjct: 331 RMRQQDPEGYRNRFKDL---------IPQSGSPPRRR----AGSPPSDGSNDGDNRGRIT 377

Query: 183 SE--DDKF 200
            E  DD+F
Sbjct: 378 DETRDDEF 385


>gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japonica Group]
          Length = 653

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
 Frame = +3

Query: 3   RMRQQDPDGYRSRLRDLTXXXXXXXXXXXXXXPPRHRSIGMAASPPSDNSNEGESGGRID 182
           RMRQQDP+GYR+R +DL               PPR R    A SPPSD SN+G++ GRI 
Sbjct: 204 RMRQQDPEGYRNRFKDL---------IPQSGSPPRRR----AGSPPSDGSNDGDNRGRIT 250

Query: 183 SE--DDKF 200
            E  DD+F
Sbjct: 251 DETRDDEF 258


>ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group]
           gi|113649443|dbj|BAF29955.1| Os12g0535900, partial
           [Oryza sativa Japonica Group]
          Length = 599

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
 Frame = +3

Query: 3   RMRQQDPDGYRSRLRDLTXXXXXXXXXXXXXXPPRHRSIGMAASPPSDNSNEGESGGRID 182
           RMRQQDP+GYR+R +DL               PPR R    A SPPSD SN+G++ GRI 
Sbjct: 150 RMRQQDPEGYRNRFKDL---------IPQSGSPPRRR----AGSPPSDGSNDGDNRGRIT 196

Query: 183 SE--DDKF 200
            E  DD+F
Sbjct: 197 DETRDDEF 204


>ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Oryza
           brachyantha]
          Length = 645

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
 Frame = +3

Query: 3   RMRQQDPDGYRSRLRDLTXXXXXXXXXXXXXXPPRHRSIGMAASPPSDNSNEGESGGRI- 179
           RMRQQDP+GYR+R +DL               PPR R    AASPPSD SN+G++ GR  
Sbjct: 190 RMRQQDPEGYRNRFKDL---------IPQSGSPPRRR----AASPPSDGSNDGDNRGRTN 236

Query: 180 -------DSEDDKF 200
                  D+ DD+F
Sbjct: 237 DHGRITDDTRDDEF 250