BLASTX nr result

ID: Zingiber23_contig00020610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00020610
         (594 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006425701.1| hypothetical protein CICLE_v10025934mg [Citr...    64   2e-08
emb|CBI17537.3| unnamed protein product [Vitis vinifera]               61   3e-07
ref|XP_002270563.1| PREDICTED: putative F-box protein At3g23950 ...    61   3e-07
emb|CAN82744.1| hypothetical protein VITISV_027510 [Vitis vinifera]    61   3e-07
ref|XP_002521581.1| conserved hypothetical protein [Ricinus comm...    60   3e-07
ref|XP_002310219.1| hypothetical protein POPTR_0007s12660g [Popu...    60   6e-07
ref|XP_003579102.1| PREDICTED: uncharacterized protein LOC100829...    58   2e-06
gb|EMJ03468.1| hypothetical protein PRUPE_ppa007853mg [Prunus pe...    56   8e-06

>ref|XP_006425701.1| hypothetical protein CICLE_v10025934mg [Citrus clementina]
           gi|568824790|ref|XP_006466777.1| PREDICTED: F-box
           protein At5g07610-like [Citrus sinensis]
           gi|557527691|gb|ESR38941.1| hypothetical protein
           CICLE_v10025934mg [Citrus clementina]
          Length = 360

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
 Frame = +1

Query: 187 VSGVFFHPSTAGRRRICLSYAPFGRLLPALPDPSLSFLPPAA--YAXXXXXXXXXXXXPW 360
           +SG F   ST+    I L+   +G     +PDPSLSFLP      +             +
Sbjct: 75  LSGFFSQSSTSEPSFISLNPIAYG-----VPDPSLSFLPEPVDIRSSSNGLLCCQGHSGY 129

Query: 361 STYYVCNPATAECRRIPLPPRPHQFNAVPALALVVRP---DDPAQFYVVCGLAVGDNGYR 531
           + YY+CNPAT    ++P P   H   + PA+ L+  P   +  A++ +VC      +GY 
Sbjct: 130 NPYYICNPATKHWHKLPKPNNDH--GSDPAVVLIFEPSILNFAAEYKLVCAFPSELDGYE 187

Query: 532 FETFSSASGVWKAS 573
           FE +SS    WK S
Sbjct: 188 FEIYSSCDKSWKTS 201


>emb|CBI17537.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
 Frame = +1

Query: 184 AVSGVFFHPSTAGRRRICLSYAPFGRLLPALPDPSLSFLPPAA--YAXXXXXXXXXXXXP 357
           AVSG+F+  +      I L    +G     +PDPSL FLP      A             
Sbjct: 123 AVSGLFYQIAGEPPSFISLDPKAYG-----VPDPSLKFLPVPVDIRASCNGLLCCQARTG 177

Query: 358 WSTYYVCNPATAECRRIPLPPRPHQFNAVPALALVVRP---DDPAQFYVVCGLAVGD--N 522
              YY+CNPAT   +++P P   H  +  PAL ++  P   +  A + +VC     D  +
Sbjct: 178 DKAYYMCNPATKMWKKLPKPDADHGTD--PALVVIFEPSLLNFVADYKLVCAFPSTDFDD 235

Query: 523 GYRFETFSSASGVWKAS 573
           GY FE +SSA G W+ S
Sbjct: 236 GYEFEIYSSAEGCWRIS 252


>ref|XP_002270563.1| PREDICTED: putative F-box protein At3g23950 [Vitis vinifera]
          Length = 357

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
 Frame = +1

Query: 184 AVSGVFFHPSTAGRRRICLSYAPFGRLLPALPDPSLSFLPPAA--YAXXXXXXXXXXXXP 357
           AVSG+F+  +      I L    +G     +PDPSL FLP      A             
Sbjct: 68  AVSGLFYQIAGEPPSFISLDPKAYG-----VPDPSLKFLPVPVDIRASCNGLLCCQARTG 122

Query: 358 WSTYYVCNPATAECRRIPLPPRPHQFNAVPALALVVRP---DDPAQFYVVCGLAVGD--N 522
              YY+CNPAT   +++P P   H  +  PAL ++  P   +  A + +VC     D  +
Sbjct: 123 DKAYYMCNPATKMWKKLPKPDADHGTD--PALVVIFEPSLLNFVADYKLVCAFPSTDFDD 180

Query: 523 GYRFETFSSASGVWKAS 573
           GY FE +SSA G W+ S
Sbjct: 181 GYEFEIYSSAEGCWRIS 197


>emb|CAN82744.1| hypothetical protein VITISV_027510 [Vitis vinifera]
          Length = 399

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
 Frame = +1

Query: 184 AVSGVFFHPSTAGRRRICLSYAPFGRLLPALPDPSLSFLPPAA--YAXXXXXXXXXXXXP 357
           AVSG+F+  +      I L    +G     +PDPSL FLP      A             
Sbjct: 110 AVSGLFYQIAGEPPSFISLDPKAYG-----VPDPSLKFLPVPVDIRASCNGLLCCQARTG 164

Query: 358 WSTYYVCNPATAECRRIPLPPRPHQFNAVPALALVVRP---DDPAQFYVVCGLAVGD--N 522
              YY+CNPAT   +++P P   H  +  PAL ++  P   +  A + +VC     D  +
Sbjct: 165 DKAYYMCNPATKMWKKLPKPDADHGTD--PALVVIFEPSLLNFVADYKLVCAFPSTDFDD 222

Query: 523 GYRFETFSSASGVWKAS 573
           GY FE +SSA G W+ S
Sbjct: 223 GYEFEIYSSAEGCWRIS 239


>ref|XP_002521581.1| conserved hypothetical protein [Ricinus communis]
           gi|223539259|gb|EEF40852.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 356

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
 Frame = +1

Query: 181 GAVSGVFFHPSTAGRRRICLSYAPFGRLLPALPDPSLSFLPPAA--YAXXXXXXXXXXXX 354
           G VSG+F    ++    I L    +G     +PDPSL FLP                   
Sbjct: 67  GDVSGLFCQSDSSLPSFISLDVMAYG-----VPDPSLKFLPELVDIRCSSNGLLCCQGHT 121

Query: 355 PWSTYYVCNPATAECRRIPLPPRPHQFNAVPALALVVRP---DDPAQFYVVCGLAVGDNG 525
            +  YY+CNP T + +++P P   H   + PAL LV  P   +  A++ ++C      +G
Sbjct: 122 GYKAYYICNPVTRQWKKLPRPDANH--GSDPALVLVYEPSLLNFVAEYKLICAFQSDLDG 179

Query: 526 YRFETFSSASGVWK 567
             FE +SS  G W+
Sbjct: 180 LEFEIYSSVEGSWR 193


>ref|XP_002310219.1| hypothetical protein POPTR_0007s12660g [Populus trichocarpa]
           gi|222853122|gb|EEE90669.1| hypothetical protein
           POPTR_0007s12660g [Populus trichocarpa]
          Length = 360

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 5/134 (3%)
 Frame = +1

Query: 187 VSGVFFHPSTAGRRRICLSYAPFGRLLPALPDPSLSFLPPAA--YAXXXXXXXXXXXXPW 360
           VSG FF  S +G      S+    R+   +PDPSL FLP                    +
Sbjct: 69  VSG-FFCQSPSGTP----SFVSLNRMAYGVPDPSLKFLPEPVDIRCSSNGLLCCQGRTGY 123

Query: 361 STYYVCNPATAECRRIPLPPRPHQFNAVPALALVVRP---DDPAQFYVVCGLAVGDNGYR 531
             YY+CNP T + +++P P   H     PA+ LV  P   +  A++ +V   A   +G+ 
Sbjct: 124 QAYYICNPVTQKWKKLPEPTANH--GTDPAVVLVFEPSLLNFVAEYKLVVAFASDLDGFE 181

Query: 532 FETFSSASGVWKAS 573
           FE +SS  G W+ S
Sbjct: 182 FEIYSSTDGFWRIS 195


>ref|XP_003579102.1| PREDICTED: uncharacterized protein LOC100829048 [Brachypodium
           distachyon]
          Length = 471

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 40/142 (28%), Positives = 57/142 (40%), Gaps = 13/142 (9%)
 Frame = +1

Query: 187 VSGVFFHPSTAGRRRICLSYAPFGRLLPALPDPSLSFLP-PAAYAXXXXXXXXXXXXPWS 363
           +SG+F H  T        ++ P       +PDP+ + LP PA                  
Sbjct: 134 ISGMFHH--TPSGSPAYFAFDPLRTAKQLIPDPAFAVLPEPATVLASSCGLVCLRGDATG 191

Query: 364 TYYVCNPATAECRRIPLPPRPHQFNAVPALALVVRPDDP------------AQFYVVCGL 507
            YYV NP T +  R+P P R H  +A PA  +    D P            + ++VV   
Sbjct: 192 FYYVANPVTFQRVRLPYPTRDHARDAAPAAVIAFDSDSPSLDAFHHDAFRFSHYHVVVAY 251

Query: 508 AVGDNGYRFETFSSASGVWKAS 573
            V D    FETFSS +  W+ +
Sbjct: 252 QVADGVCAFETFSSRTWDWRVA 273


>gb|EMJ03468.1| hypothetical protein PRUPE_ppa007853mg [Prunus persica]
          Length = 353

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
 Frame = +1

Query: 187 VSGVFFHPSTAGRRRICLSYAPFGRLLPALPDPSLSFLPPAA--YAXXXXXXXXXXXXPW 360
           +SG F+         I L    +G     +PDP L FLP                    +
Sbjct: 69  ISGFFYQSRADPSSFISLDRNAYG-----VPDPCLKFLPEPVDIRTSSNGLLCCQGRDGY 123

Query: 361 STYYVCNPATAECRRIPLPPRPHQFNAVPALALVVRP---DDPAQFYVVCGLAVGD--NG 525
             YY+CNP T + +++P     H   + PA+ L+  P   +  A++ +VC     D  NG
Sbjct: 124 KAYYICNPVTKKWKQLPKANADH--GSDPAIVLIFEPSLLNFVAEYKLVCAFPSVDFDNG 181

Query: 526 YRFETFSSASGVWKAS 573
           Y FE +SS  G W+ S
Sbjct: 182 YEFEIYSSKEGSWRVS 197


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