BLASTX nr result
ID: Zingiber23_contig00020411
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00020411
(524 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 214 1e-53
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 214 1e-53
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-... 211 1e-52
emb|CAB83107.1| sigma factor 3 [Sinapis alba] 210 1e-52
ref|XP_006853783.1| hypothetical protein AMTR_s00056p00209700 [A... 210 2e-52
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp.... 210 2e-52
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 209 2e-52
ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Caps... 208 5e-52
gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus pe... 207 2e-51
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-... 206 3e-51
dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsi... 205 6e-51
ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis tha... 204 1e-50
ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr... 202 3e-50
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr... 202 3e-50
gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobrom... 202 3e-50
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-... 201 1e-49
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu... 200 1e-49
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 197 1e-48
ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutr... 195 5e-48
ref|XP_003588449.1| RNA polymerase sigma-B factor [Medicago trun... 194 8e-48
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 214 bits (544), Expect = 1e-53
Identities = 99/172 (57%), Positives = 135/172 (78%), Gaps = 2/172 (1%)
Frame = +1
Query: 13 AKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGWYCRD 192
AKNE+EMS GVK +ANLE++ LEE++G S + WAEAAG+++K L+ +LQFGWYCRD
Sbjct: 266 AKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRD 325
Query: 193 KLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQYWIRK 372
+L+RST SLV+++A+NYRGMG+AF+D++QAG +GVL G ER+D KGYRFSTYVQYWIRK
Sbjct: 326 ELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRK 385
Query: 373 SILAMIASHSRTVKV--RMESMINQIQKVKRNFHTSEGKYPNDEEITELTGL 522
S+ ++A H+R VK+ + I QIQK ++ + S G+YP+D EI + TGL
Sbjct: 386 SMSTLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGL 437
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 214 bits (544), Expect = 1e-53
Identities = 99/172 (57%), Positives = 135/172 (78%), Gaps = 2/172 (1%)
Frame = +1
Query: 13 AKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGWYCRD 192
AKNE+EMS GVK +ANLE++ LEE++G S + WAEAAG+++K L+ +LQFGWYCRD
Sbjct: 316 AKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRD 375
Query: 193 KLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQYWIRK 372
+L+RST SLV+++A+NYRGMG+AF+D++QAG +GVL G ER+D KGYRFSTYVQYWIRK
Sbjct: 376 ELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRK 435
Query: 373 SILAMIASHSRTVKV--RMESMINQIQKVKRNFHTSEGKYPNDEEITELTGL 522
S+ ++A H+R VK+ + I QIQK ++ + S G+YP+D EI + TGL
Sbjct: 436 SMSTLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGL 487
>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
subsp. vesca]
Length = 545
Score = 211 bits (536), Expect = 1e-52
Identities = 97/176 (55%), Positives = 140/176 (79%), Gaps = 2/176 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
R ++AKNE+EMS+GVK +A+LE+L LE++ GK P+ WAEAAG+++K L+ +L FGW
Sbjct: 245 RLMMAKNEAEMSVGVKVIADLERLKVTLEKETGKVPTLRCWAEAAGVDEKVLQQQLHFGW 304
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YC+D+L+RSTRSLV+++A+NYRG+G+A DDL+QAG +G+L G ER+D +GYRFSTYVQY
Sbjct: 305 YCQDELVRSTRSLVLYLARNYRGLGVALDDLLQAGNLGLLQGAERFDPSRGYRFSTYVQY 364
Query: 361 WIRKSILAMIASHSRTVKV--RMESMINQIQKVKRNFHTSEGKYPNDEEITELTGL 522
WIRKS+ ++A H+R +K+ + IN+IQK ++ + S KYP+DEEI ++TGL
Sbjct: 365 WIRKSMSRLVAQHARGIKIPNTLSKAINRIQKARKANYNSHMKYPDDEEIAKITGL 420
>emb|CAB83107.1| sigma factor 3 [Sinapis alba]
Length = 567
Score = 210 bits (535), Expect = 1e-52
Identities = 102/176 (57%), Positives = 138/176 (78%), Gaps = 3/176 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
RE I++NE+EMS GVK +A++E++ LEE+ GK S + WAEAAG+NQK L L FGW
Sbjct: 267 RERISRNEAEMSQGVKIVADMERIRTKLEEETGKVASMSCWAEAAGMNQKLLMHNLHFGW 326
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YCRD+L++STRSLV+F+A+NYRG+GIA +DLIQAGYVGVL G ER+D +GY+FSTYV+Y
Sbjct: 327 YCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVRY 386
Query: 361 WIRKSILAMIASHSRTVKVRMESM--INQIQKVKRNFHTSEG-KYPNDEEITELTG 519
WIRKS+ M++ H+R V + + ++QIQK ++ TS+G KYP DEEI++LTG
Sbjct: 387 WIRKSMSTMVSRHARGVHIPASIIRTMSQIQKARKTLKTSQGIKYPADEEISKLTG 442
>ref|XP_006853783.1| hypothetical protein AMTR_s00056p00209700 [Amborella trichopoda]
gi|548857444|gb|ERN15250.1| hypothetical protein
AMTR_s00056p00209700 [Amborella trichopoda]
Length = 529
Score = 210 bits (534), Expect = 2e-52
Identities = 99/172 (57%), Positives = 133/172 (77%), Gaps = 2/172 (1%)
Frame = +1
Query: 13 AKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGWYCRD 192
A++E EMS GV+E+A LEK+ NLEE++G+ SF+ WAEAAG+N+K L+ +L FGW+CRD
Sbjct: 234 AQSEVEMSRGVQEVAKLEKIRANLEENLGRDASFSVWAEAAGINEKVLKQQLHFGWFCRD 293
Query: 193 KLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQYWIRK 372
KL+RSTR LV+++AK+YRG GI F+DL+QAG +GVL G ER+D +GYRFSTYVQYWIRK
Sbjct: 294 KLLRSTRPLVMYLAKSYRGRGIGFEDLLQAGSLGVLQGAERFDHTRGYRFSTYVQYWIRK 353
Query: 373 SILAMIASHSRTVKVRM--ESMINQIQKVKRNFHTSEGKYPNDEEITELTGL 522
S+ A++A HSR V++ M ++NQ K KR H G++P + EI E TGL
Sbjct: 354 SLSALVARHSRGVQIPMALNKVLNQTVKAKRALHQMHGRHPREVEIAEFTGL 405
>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323785|gb|EFH54206.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 568
Score = 210 bits (534), Expect = 2e-52
Identities = 103/177 (58%), Positives = 137/177 (77%), Gaps = 3/177 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
RE I+KNE+EMS GVK +A++E++ LEE+ GK S + WAEAAG+N+K L L +GW
Sbjct: 268 RERISKNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYGW 327
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YCRD+L++STRSLV+F+A+NYRG+GIA +DLIQAGYVGVL G ER+D +GY+FSTYVQY
Sbjct: 328 YCRDELLKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQY 387
Query: 361 WIRKSILAMIASHSRTVKVRMESM--INQIQKVKRNFHTSEG-KYPNDEEITELTGL 522
WIRKS+ M++ H+R V + + INQIQK ++ TS G KYP DE+I++LT L
Sbjct: 388 WIRKSMSMMVSRHARGVHIPSSIIRTINQIQKARKTLKTSHGIKYPADEDISKLTSL 444
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
tuberosum]
Length = 555
Score = 209 bits (533), Expect = 2e-52
Identities = 98/176 (55%), Positives = 135/176 (76%), Gaps = 2/176 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
R+ IAKNE+EMS GVK +A LE++ LEE+ G+ +F+ WAEAAG+ QK L+ RL FGW
Sbjct: 257 RQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEAAGIEQKELQQRLHFGW 316
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YCRD+L++STRSLV+++A+NYRG+G+AF+DLIQAG +GVL G R+D +GY+FSTYVQY
Sbjct: 317 YCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQY 376
Query: 361 WIRKSILAMIASHSRTVKVRME--SMINQIQKVKRNFHTSEGKYPNDEEITELTGL 522
WIRKS+ ++A H+R V++ +INQI K ++ S GK+P D+EI + TGL
Sbjct: 377 WIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGL 432
>ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Capsella rubella]
gi|482559522|gb|EOA23713.1| hypothetical protein
CARUB_v10016920mg [Capsella rubella]
Length = 581
Score = 208 bits (530), Expect = 5e-52
Identities = 102/177 (57%), Positives = 137/177 (77%), Gaps = 3/177 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
RE I++NE+EMS GVK +A++E++ LEE+ GK S + WAEAAG+N+K L L +GW
Sbjct: 281 RERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYGW 340
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YCRD+L++STRSLV+F+A+NYRG+GIA +DLIQAG+VGVL G ER+D +GY+FSTYVQY
Sbjct: 341 YCRDELLKSTRSLVLFLARNYRGLGIAHEDLIQAGFVGVLQGAERFDHARGYKFSTYVQY 400
Query: 361 WIRKSILAMIASHSRTVKVRMESM--INQIQKVKRNFHTSEG-KYPNDEEITELTGL 522
WIRKS+ M++ H+R V + + INQIQK ++ TS G KYP DEEI++LT L
Sbjct: 401 WIRKSMSMMVSRHARGVHIPSSIIRTINQIQKARKTLKTSHGIKYPADEEISKLTSL 457
>gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
Length = 555
Score = 207 bits (526), Expect = 2e-51
Identities = 97/176 (55%), Positives = 138/176 (78%), Gaps = 2/176 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
R I+KNE+EMS+GVK +A+LE++ + LE++ GK + WAEAAG+++K L L+FGW
Sbjct: 256 RLTISKNEAEMSIGVKVIADLERIKETLEKETGKVATLRCWAEAAGVHEKVLLQHLRFGW 315
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YC+D+LIRSTRSLV+++A+NYRG+G+A DDL+QAG +G+L G ER+D +GYRFSTYVQY
Sbjct: 316 YCQDELIRSTRSLVLYLARNYRGLGVALDDLMQAGNLGLLQGAERFDHSRGYRFSTYVQY 375
Query: 361 WIRKSILAMIASHSRTVKV--RMESMINQIQKVKRNFHTSEGKYPNDEEITELTGL 522
WIRKS+ ++A H+R V++ + INQIQK ++ + S KYP+DEEI ++TGL
Sbjct: 376 WIRKSMSRLVAQHARGVQIPFTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGL 431
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
lycopersicum]
Length = 551
Score = 206 bits (523), Expect = 3e-51
Identities = 96/176 (54%), Positives = 134/176 (76%), Gaps = 2/176 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
R+ IAKNE+EMS GVK +A LE++ LEE+ G+ +F+ WA+AAG+ QK L+ L FGW
Sbjct: 253 RQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFSSWAKAAGIEQKELQQHLHFGW 312
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YCRD+L++STRSLV+++A+NYRG+G+AF+DLIQAG +GVL G R+D +GY+FSTYVQY
Sbjct: 313 YCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQY 372
Query: 361 WIRKSILAMIASHSRTVKVRME--SMINQIQKVKRNFHTSEGKYPNDEEITELTGL 522
WIRKS+ ++A H+R V++ +INQI K ++ S GK+P D+EI + TGL
Sbjct: 373 WIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGL 428
>dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
Length = 571
Score = 205 bits (521), Expect = 6e-51
Identities = 101/176 (57%), Positives = 133/176 (75%), Gaps = 3/176 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
RE I++NE+EMS GVK +A++E++ LEE+ GK S + WA AAG+N+K L L +GW
Sbjct: 271 RERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKLLMRNLHYGW 330
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YCRD+L++STRSLV+F+A+NYRGMGIA +DLIQAGYVGVL G ER+D +GY+FSTYVQY
Sbjct: 331 YCRDELVKSTRSLVLFLARNYRGMGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQY 390
Query: 361 WIRKSILAMIASHSRTVKVRMESM--INQIQKVKRNFHTSEG-KYPNDEEITELTG 519
WIRKS+ M++ H+R V + + IN IQK ++ TS G KY DEEI +LTG
Sbjct: 391 WIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTG 446
>ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis thaliana]
gi|75098239|sp|O24621.1|SIGC_ARATH RecName: Full=RNA
polymerase sigma factor sigC; Short=Sigma factor C;
Short=Sigma-C; AltName: Full=RNA polymerase sigma factor
sig3; Short=Atsig3; Short=Sigma factor 3; Flags:
Precursor gi|2353175|gb|AAB69386.1| sigma factor 3
[Arabidopsis thaliana] gi|2463554|dbj|BAA22530.1| SigC
[Arabidopsis thaliana] gi|5478585|dbj|BAA82450.1| sigma
factor SigC [Arabidopsis thaliana]
gi|7630012|emb|CAB88354.1| sigma factor SigC
[Arabidopsis thaliana] gi|133778870|gb|ABO38775.1|
At3g53920 [Arabidopsis thaliana]
gi|332645638|gb|AEE79159.1| RNApolymerase sigma-subunit
C [Arabidopsis thaliana]
Length = 571
Score = 204 bits (518), Expect = 1e-50
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 3/176 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
RE I++NE+EMS GVK +A++E++ LEE+ GK S + WA AAG+N+K L L +GW
Sbjct: 271 RERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKLLMRNLHYGW 330
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YCRD+L++STRSLV+F+A+NYRG+GIA +DLIQAGYVGVL G ER+D +GY+FSTYVQY
Sbjct: 331 YCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQY 390
Query: 361 WIRKSILAMIASHSRTVKVRMESM--INQIQKVKRNFHTSEG-KYPNDEEITELTG 519
WIRKS+ M++ H+R V + + IN IQK ++ TS G KY DEEI +LTG
Sbjct: 391 WIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTG 446
>ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553990|gb|ESR64004.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 442
Score = 202 bits (515), Expect = 3e-50
Identities = 96/176 (54%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
R +IA+NE+EMS GV+ +ANLE++ LE++ GK S WA+AAG++++ L+ L FGW
Sbjct: 235 RLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFGW 294
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YCR++LI+STR LV+F+A+NYRG+GI F DL+QAG VGVL G ER+D +GY+FSTYVQY
Sbjct: 295 YCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQY 354
Query: 361 WIRKSILAMIASHSRTVKV--RMESMINQIQKVKRNFHTSEGKYPNDEEITELTGL 522
WIRKSI M+A H+R +K+ ++ I++IQK ++ S GKYP D EI + TGL
Sbjct: 355 WIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGL 410
>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553989|gb|ESR64003.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 534
Score = 202 bits (515), Expect = 3e-50
Identities = 96/176 (54%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
R +IA+NE+EMS GV+ +ANLE++ LE++ GK S WA+AAG++++ L+ L FGW
Sbjct: 235 RLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFGW 294
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YCR++LI+STR LV+F+A+NYRG+GI F DL+QAG VGVL G ER+D +GY+FSTYVQY
Sbjct: 295 YCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQY 354
Query: 361 WIRKSILAMIASHSRTVKV--RMESMINQIQKVKRNFHTSEGKYPNDEEITELTGL 522
WIRKSI M+A H+R +K+ ++ I++IQK ++ S GKYP D EI + TGL
Sbjct: 355 WIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGL 410
>gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
Length = 848
Score = 202 bits (515), Expect = 3e-50
Identities = 96/173 (55%), Positives = 133/173 (76%), Gaps = 2/173 (1%)
Frame = +1
Query: 10 IAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGWYCR 189
IA+NE+EMS GVK +ANLE++ LEE+ G+ S + WAEAAG+++K L+ L+FGWYCR
Sbjct: 552 IARNEAEMSKGVKVVANLERIRTTLEEETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCR 611
Query: 190 DKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQYWIR 369
D+L+RSTRSLV++ A+NYRG+GIA +DLIQAG +GVL G ER+D +GYRFSTYVQ+WIR
Sbjct: 612 DELLRSTRSLVLYFARNYRGLGIAHEDLIQAGSLGVLQGAERFDHTRGYRFSTYVQFWIR 671
Query: 370 KSILAMIASHSRTVKV--RMESMINQIQKVKRNFHTSEGKYPNDEEITELTGL 522
KS+ ++A H+R ++V + I QIQK ++ S GKYP+++ I + TGL
Sbjct: 672 KSVSRIVARHARGIQVPCTLSRAIVQIQKARKALSKSHGKYPDEDAIAKFTGL 724
>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
Length = 534
Score = 201 bits (510), Expect = 1e-49
Identities = 95/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
R +IA+NE+EMS GV+ +ANLE++ LE++ GK WA+AAG++++ L+ L FGW
Sbjct: 235 RLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAARLNCWAQAAGVSERVLKQHLAFGW 294
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YCR++LI+STR LV+F+A+NYRG+GI F DL+QAG VGVL G ER+D +GY+FSTYVQY
Sbjct: 295 YCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQY 354
Query: 361 WIRKSILAMIASHSRTVKV--RMESMINQIQKVKRNFHTSEGKYPNDEEITELTGL 522
WIRKSI M+A H+R +K+ ++ I++IQK ++ S GKYP D EI + TGL
Sbjct: 355 WIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGL 410
>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
gi|222854562|gb|EEE92109.1| hypothetical protein
POPTR_0006s25090g [Populus trichocarpa]
Length = 559
Score = 200 bits (509), Expect = 1e-49
Identities = 92/176 (52%), Positives = 135/176 (76%), Gaps = 2/176 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
R +IA+NE++M+ GVK ++LE++ LEE+ G+ S + WAEA GL++K L+ +LQFGW
Sbjct: 260 RSLIARNEAKMTRGVKVASDLERIRTTLEEETGQVVSLSCWAEATGLDKKVLQQQLQFGW 319
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YCRD+LI++T SLV+++A+NYRGMGIA +DLIQAG +G+L G ER+D +GYRFSTYVQY
Sbjct: 320 YCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQAGNLGLLQGAERFDPTRGYRFSTYVQY 379
Query: 361 WIRKSILAMIASHSRTVKV--RMESMINQIQKVKRNFHTSEGKYPNDEEITELTGL 522
WIRKS+L ++ H+R +++ + IN+IQK ++ S G+YP+D E+ + TGL
Sbjct: 380 WIRKSMLKIVERHARGIQIPYALSRSINKIQKARKALSNSHGRYPDDWEVAKFTGL 435
>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 560
Score = 197 bits (501), Expect = 1e-48
Identities = 95/176 (53%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
R +IA+NE+EM+ G+K +A+LEK+ LEE+ + S + WAEAAGL+ K L+ +L FGW
Sbjct: 261 RLIIARNEAEMARGIKVLADLEKIRTTLEEETERVVSLSCWAEAAGLDVKVLQQQLSFGW 320
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YCRD+LI+STRSLV++ A+NYRG GIA +DL+QAG +GVL G ER+D +GYRFSTYVQY
Sbjct: 321 YCRDELIKSTRSLVLYFARNYRGTGIALEDLLQAGNLGVLEGAERFDHTRGYRFSTYVQY 380
Query: 361 WIRKSILAMIASHSRTVKV--RMESMINQIQKVKRNFHTSEGKYPNDEEITELTGL 522
WIRKS+ +++ +R +++ + I QIQK ++ TS GKYP+D+EI + TGL
Sbjct: 381 WIRKSMSKIVSRLARGIQIPCTLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGL 436
>ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutrema salsugineum]
gi|312281919|dbj|BAJ33825.1| unnamed protein product
[Thellungiella halophila] gi|557104759|gb|ESQ45093.1|
hypothetical protein EUTSA_v10010251mg [Eutrema
salsugineum]
Length = 562
Score = 195 bits (496), Expect = 5e-48
Identities = 96/176 (54%), Positives = 133/176 (75%), Gaps = 3/176 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
RE I++NE+EMS G K +A++E++ LEE+ GK S + WAEAAG+N+ L L +GW
Sbjct: 262 RERISRNEAEMSAGAKIVADMERIRTKLEEESGKVASMSCWAEAAGMNEILLMRNLHYGW 321
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YCRD+L++STRSLV+F+++NYRG+GIA +DLIQAG VGVL G ER+D +GY+FSTYVQY
Sbjct: 322 YCRDELLKSTRSLVLFLSRNYRGLGIAHEDLIQAGNVGVLQGAERFDHTRGYKFSTYVQY 381
Query: 361 WIRKSILAMIASHSRTVKVRMESM--INQIQKVKRNFHTSEG-KYPNDEEITELTG 519
WIRKS+ M++ H+R V + + ++QIQK ++ TS G KYP DEEI++ TG
Sbjct: 382 WIRKSMSMMVSRHARGVYIPSSVIRTMSQIQKARKTLKTSHGIKYPADEEISKETG 437
>ref|XP_003588449.1| RNA polymerase sigma-B factor [Medicago truncatula]
gi|355477497|gb|AES58700.1| RNA polymerase sigma-B
factor [Medicago truncatula]
Length = 549
Score = 194 bits (494), Expect = 8e-48
Identities = 97/176 (55%), Positives = 128/176 (72%), Gaps = 2/176 (1%)
Frame = +1
Query: 1 REVIAKNESEMSMGVKEMANLEKLCKNLEEDMGKPPSFTRWAEAAGLNQKTLRSRLQFGW 180
R VIA+ E EMS GVK +A LEK+ +EED + S + WAE +G+++K L+ +L G+
Sbjct: 255 RAVIAQREVEMSKGVKVLAELEKIRTAIEEDTKQVVSLSSWAETSGVDEKVLQQQLYHGY 314
Query: 181 YCRDKLIRSTRSLVIFVAKNYRGMGIAFDDLIQAGYVGVLNGTERYDIEKGYRFSTYVQY 360
YCRD+LIRSTRSLV++ A+ YRGMGIA +DL+Q GY+GVL G ER+D KGYRFSTYVQY
Sbjct: 315 YCRDELIRSTRSLVLYFARKYRGMGIALEDLLQVGYIGVLQGAERFDSTKGYRFSTYVQY 374
Query: 361 WIRKSILAMIASHSR--TVKVRMESMINQIQKVKRNFHTSEGKYPNDEEITELTGL 522
WIRKS+ M+A ++R TV M I+QIQK ++ + KYPND EI ++TGL
Sbjct: 375 WIRKSMSRMVAKYARGITVPWSMNKAISQIQKARKVLKNTTMKYPNDLEIAKMTGL 430