BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00020308
         (616 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ26403.1| hypothetical protein PRUPE_ppa002057mg [Prunus pe...    85   1e-14
emb|CBI17913.3| unnamed protein product [Vitis vinifera]               77   3e-12
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]      77   3e-12
gb|EXC31206.1| DNA ligase 4 [Morus notabilis]                          72   2e-10
ref|XP_002534602.1| conserved hypothetical protein [Ricinus comm...    66   7e-09
gb|EOY32048.1| DNA ligase IV [Theobroma cacao]                         63   7e-08
ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum]     59   1e-06
ref|XP_006597804.1| PREDICTED: DNA ligase 4-like isoform X5 [Gly...    59   1e-06
ref|XP_006597803.1| PREDICTED: DNA ligase 4-like isoform X4 [Gly...    59   1e-06
ref|XP_006597802.1| PREDICTED: DNA ligase 4-like isoform X3 [Gly...    59   1e-06
ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Gly...    59   1e-06
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Gly...    59   1e-06

>gb|EMJ26403.1| hypothetical protein PRUPE_ppa002057mg [Prunus persica]
          Length = 723

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 62/186 (33%), Positives = 92/186 (49%), Gaps = 21/186 (11%)
 Frame = +3

Query: 120  RTEARKRARAPHRTTGKAKP--RQTKRQRTRVGRRAAKIXXXXXXXXXXXXXNQEATELN 293
            R   RKR R    +  K K    Q +R R R+GR+ AKI                A E++
Sbjct: 531  RESKRKRGRPALTSMNKGKTGVNQARRTRVRIGRKPAKISGNESDEGGSHDNTLRAEEVD 590

Query: 294  -ETKHTGIERTKACDPLGQVGLPDKYPL-----------ELINKQDSVENKPELDV---- 425
             E +  G+    + D      + D   L           E I+ +D     P +++    
Sbjct: 591  KEARKHGMMSDASLDIQENEAIKDSESLQRDNAAVQEVAEDISFEDHSYKIPNVEMIEKC 650

Query: 426  ---NSGQHEKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDANPVKKKKL 596
               +SG+ EKLE MADP+ A+L DMIPSL+ +KVE  ++++E + P +D +A P KKKK+
Sbjct: 651  NIEDSGKPEKLEVMADPVQAMLFDMIPSLAMKKVETTNTSIEKEKPAVDLNAGPSKKKKV 710

Query: 597  SYKEVA 614
            SYK+VA
Sbjct: 711  SYKDVA 716


>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 24/189 (12%)
 Frame = +3

Query: 120  RTEARKRAR--APHRTTGKAKPRQTKRQRTRVGRRAAKIXXXXXXXXXXXXXNQEATEL- 290
            R E RKR R   P    GKA   Q +R R R+G+                   +E T++ 
Sbjct: 971  RDEKRKRGRPAGPSTKKGKAGFSQARRTRPRIGKPPKIYENESDASDSGEKMEEEGTKMG 1030

Query: 291  -NETKHTGIERTKACDPL-----------GQVGLPDKYPLELINKQD---------SVEN 407
             N   H G+E  K C  +            Q G  ++  + L N ++          +++
Sbjct: 1031 GNHAIH-GVE-CKECPEIQETEIVEDSESSQRGKTEEKEVALDNVREKWLDRAQDIELDS 1088

Query: 408  KPELDVNSGQHEKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDANPVKK 587
            + ++D NS + EKLE M DP+ A+LLDMIPSL  +K E  +  ++ + P ++  A PVKK
Sbjct: 1089 ENKVD-NSKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVEQGAEPVKK 1147

Query: 588  KKLSYKEVA 614
            KK+SYK+VA
Sbjct: 1148 KKVSYKDVA 1156


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 24/189 (12%)
 Frame = +3

Query: 120  RTEARKRAR--APHRTTGKAKPRQTKRQRTRVGRRAAKIXXXXXXXXXXXXXNQEATEL- 290
            R E RKR R   P    GKA   Q +R R R+G+                   +E T++ 
Sbjct: 970  RDEKRKRGRPAGPSTKKGKAGFSQARRTRPRIGKPPKIYENESDASDSGEKMEEEGTKMG 1029

Query: 291  -NETKHTGIERTKACDPL-----------GQVGLPDKYPLELINKQD---------SVEN 407
             N   H G+E  K C  +            Q G  ++  + L N ++          +++
Sbjct: 1030 GNHAIH-GVE-CKECPEIQETEIVEDSESSQRGKTEEKEVALDNVREKWLDRAQDIELDS 1087

Query: 408  KPELDVNSGQHEKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDANPVKK 587
            + ++D NS + EKLE M DP+ A+LLDMIPSL  +K E  +  ++ + P ++  A PVKK
Sbjct: 1088 ENKVD-NSKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVEQGAEPVKK 1146

Query: 588  KKLSYKEVA 614
            KK+SYK+VA
Sbjct: 1147 KKVSYKDVA 1155


>gb|EXC31206.1| DNA ligase 4 [Morus notabilis]
          Length = 821

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
 Frame = +3

Query: 168  KAKPRQTKRQRTRVGRRAAKIXXXXXXXXXXXXX-------NQEATELNETKHTGIERTK 326
            K   +Q +R R R+G++ AKI                    N++  +++E    G  +T+
Sbjct: 644  KGGAKQVRRTRARIGKKPAKISGNESEDNASQDESTFKEPANKQIEDIHERIDIGTSQTR 703

Query: 327  ACDPL-----GQVGLPDKYPLE-----LINKQDSVENKPELDVNSGQH-----EKLEQMA 461
                +      + G  DK   E       NK    E   + +  + Q      EKLE M 
Sbjct: 704  ETKTIEKSESSEKGNADKQEGEGNIRYWFNKVPENETSEKQNSENSQPPPPPPEKLELMT 763

Query: 462  DPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDANPVKKKKLSYKEVA 614
            DP+HA+LLDMIP L + KVE  +++ E K P +D +A   KKKK+SYK++A
Sbjct: 764  DPVHAMLLDMIPRLGKEKVEITNTSTEDKKPAVDPNAPQPKKKKVSYKDIA 814


>ref|XP_002534602.1| conserved hypothetical protein [Ricinus communis]
           gi|223524943|gb|EEF27780.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 251

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 34/58 (58%), Positives = 41/58 (70%)
 Frame = +3

Query: 441 EKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDANPVKKKKLSYKEVA 614
           +KLE M DP+HA+LLDMIPSL  R VE  +   E + P  D  A PVKKKK+SYK+VA
Sbjct: 188 DKLEIMVDPIHAMLLDMIPSLGVRNVEISNQVFEREKPAGDPTAQPVKKKKVSYKDVA 245


>gb|EOY32048.1| DNA ligase IV [Theobroma cacao]
          Length = 1195

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 18/88 (20%)
 Frame = +3

Query: 405  NKPELDVNS--GQHEKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDAN- 575
            N  ELD  +   + EKLE M DP+ A+LLDMIPSL  + VE  +S VE + P  DN+A  
Sbjct: 1101 NLMELDQENCGAKSEKLEVMVDPVQAMLLDMIPSLGIKHVEATNSFVENEKPPADNNAEI 1160

Query: 576  ---------------PVKKKKLSYKEVA 614
                           PVKKKK+SYK+VA
Sbjct: 1161 PVVEDYKLDADFIAPPVKKKKVSYKDVA 1188


>ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum]
          Length = 1168

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 60/193 (31%), Positives = 89/193 (46%), Gaps = 32/193 (16%)
 Frame = +3

Query: 132  RKRARAPHRTTGKAKP--RQTKRQRTRVGRRAAKIXXXXXXXXXXXXXN----------- 272
            RKR R   R   K K    Q ++ R+++ ++ AK+                         
Sbjct: 974  RKRGRPAGRGIKKVKTDGNQARKARSQIAKKRAKLCEYESDESDSLDKKPYEQEADIAEG 1033

Query: 273  -----QEATELNETKHT-GIERTKACDPLGQVGLPDKYPLELIN---KQDSVENKPEL-- 419
                  E +E +ET+ T  ++ TKA +   Q        +EL++   KQ    + PE+  
Sbjct: 1034 SLDFYNEHSEPHETEKTHDVQGTKAVECSEQ-----NKGIELVDFRDKQHENMSVPEIEM 1088

Query: 420  -----DVNSGQHEKLEQMADPLHAILLDMIPSLSQRKVEG--ESSAVEGKIPQIDN-DAN 575
                 D NS   EKLE + DP+ A+LLDMIPSL+  KVE    S   E K P+I N + +
Sbjct: 1089 NDVHNDENSHVTEKLEILTDPVQAMLLDMIPSLATEKVEQPLNSYVEEEKPPEISNEEPS 1148

Query: 576  PVKKKKLSYKEVA 614
              KKKK+S+K +A
Sbjct: 1149 TSKKKKVSFKAIA 1161


>ref|XP_006597804.1| PREDICTED: DNA ligase 4-like isoform X5 [Glycine max]
          Length = 939

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 32/218 (14%)
 Frame = +3

Query: 57   GVQLPASTSTTKNYNATNLVGRTEARKRARAPHRTTGKAKP---RQTKRQRTRVGRRAAK 227
            G+Q  +S + +++  A     +   RKR R       K K    +Q +R R ++ ++ AK
Sbjct: 716  GIQQRSSKAASEDSMALVSQEKGGKRKRGRPAGSGIKKVKQPAVKQARRARPQIAKKPAK 775

Query: 228  IXXXXXXXXXXXXXNQEATELNETKHTGIERTKACDPLGQVGLPDKYPLELINKQDSVEN 407
            I              +   +  +T+   ++  K      +    +   +  I K +S +N
Sbjct: 776  ICEYESSDESDSHGKRPIEQEIDTRAGSLDFYKKRSEPQETEKRENVQVAEIEK-NSEQN 834

Query: 408  K-----------------PELDV-------NSGQHEKLEQMADPLHAILLDMIPSLSQRK 515
            K                 PE+++       N+   EKLE  ADPL A+L DMIPSL+ +K
Sbjct: 835  KLDKQKDLNDNERERMLVPEIEMSDRHNEQNNEVTEKLEISADPLQAMLFDMIPSLATQK 894

Query: 516  VEG--ESSAVEGKIPQIDN-DANPV--KKKKLSYKEVA 614
            VE     S  E K+P+  N +A P+  KKKK+SYK+VA
Sbjct: 895  VEQPMNRSVREEKLPETSNAEAEPMTTKKKKVSYKDVA 932


>ref|XP_006597803.1| PREDICTED: DNA ligase 4-like isoform X4 [Glycine max]
          Length = 955

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 32/218 (14%)
 Frame = +3

Query: 57   GVQLPASTSTTKNYNATNLVGRTEARKRARAPHRTTGKAKP---RQTKRQRTRVGRRAAK 227
            G+Q  +S + +++  A     +   RKR R       K K    +Q +R R ++ ++ AK
Sbjct: 732  GIQQRSSKAASEDSMALVSQEKGGKRKRGRPAGSGIKKVKQPAVKQARRARPQIAKKPAK 791

Query: 228  IXXXXXXXXXXXXXNQEATELNETKHTGIERTKACDPLGQVGLPDKYPLELINKQDSVEN 407
            I              +   +  +T+   ++  K      +    +   +  I K +S +N
Sbjct: 792  ICEYESSDESDSHGKRPIEQEIDTRAGSLDFYKKRSEPQETEKRENVQVAEIEK-NSEQN 850

Query: 408  K-----------------PELDV-------NSGQHEKLEQMADPLHAILLDMIPSLSQRK 515
            K                 PE+++       N+   EKLE  ADPL A+L DMIPSL+ +K
Sbjct: 851  KLDKQKDLNDNERERMLVPEIEMSDRHNEQNNEVTEKLEISADPLQAMLFDMIPSLATQK 910

Query: 516  VEG--ESSAVEGKIPQIDN-DANPV--KKKKLSYKEVA 614
            VE     S  E K+P+  N +A P+  KKKK+SYK+VA
Sbjct: 911  VEQPMNRSVREEKLPETSNAEAEPMTTKKKKVSYKDVA 948


>ref|XP_006597802.1| PREDICTED: DNA ligase 4-like isoform X3 [Glycine max]
          Length = 1011

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 32/218 (14%)
 Frame = +3

Query: 57   GVQLPASTSTTKNYNATNLVGRTEARKRARAPHRTTGKAKP---RQTKRQRTRVGRRAAK 227
            G+Q  +S + +++  A     +   RKR R       K K    +Q +R R ++ ++ AK
Sbjct: 788  GIQQRSSKAASEDSMALVSQEKGGKRKRGRPAGSGIKKVKQPAVKQARRARPQIAKKPAK 847

Query: 228  IXXXXXXXXXXXXXNQEATELNETKHTGIERTKACDPLGQVGLPDKYPLELINKQDSVEN 407
            I              +   +  +T+   ++  K      +    +   +  I K +S +N
Sbjct: 848  ICEYESSDESDSHGKRPIEQEIDTRAGSLDFYKKRSEPQETEKRENVQVAEIEK-NSEQN 906

Query: 408  K-----------------PELDV-------NSGQHEKLEQMADPLHAILLDMIPSLSQRK 515
            K                 PE+++       N+   EKLE  ADPL A+L DMIPSL+ +K
Sbjct: 907  KLDKQKDLNDNERERMLVPEIEMSDRHNEQNNEVTEKLEISADPLQAMLFDMIPSLATQK 966

Query: 516  VEG--ESSAVEGKIPQIDN-DANPV--KKKKLSYKEVA 614
            VE     S  E K+P+  N +A P+  KKKK+SYK+VA
Sbjct: 967  VEQPMNRSVREEKLPETSNAEAEPMTTKKKKVSYKDVA 1004


>ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Glycine max]
          Length = 1104

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 32/218 (14%)
 Frame = +3

Query: 57   GVQLPASTSTTKNYNATNLVGRTEARKRARAPHRTTGKAKP---RQTKRQRTRVGRRAAK 227
            G+Q  +S + +++  A     +   RKR R       K K    +Q +R R ++ ++ AK
Sbjct: 881  GIQQRSSKAASEDSMALVSQEKGGKRKRGRPAGSGIKKVKQPAVKQARRARPQIAKKPAK 940

Query: 228  IXXXXXXXXXXXXXNQEATELNETKHTGIERTKACDPLGQVGLPDKYPLELINKQDSVEN 407
            I              +   +  +T+   ++  K      +    +   +  I K +S +N
Sbjct: 941  ICEYESSDESDSHGKRPIEQEIDTRAGSLDFYKKRSEPQETEKRENVQVAEIEK-NSEQN 999

Query: 408  K-----------------PELDV-------NSGQHEKLEQMADPLHAILLDMIPSLSQRK 515
            K                 PE+++       N+   EKLE  ADPL A+L DMIPSL+ +K
Sbjct: 1000 KLDKQKDLNDNERERMLVPEIEMSDRHNEQNNEVTEKLEISADPLQAMLFDMIPSLATQK 1059

Query: 516  VEG--ESSAVEGKIPQIDN-DANPV--KKKKLSYKEVA 614
            VE     S  E K+P+  N +A P+  KKKK+SYK+VA
Sbjct: 1060 VEQPMNRSVREEKLPETSNAEAEPMTTKKKKVSYKDVA 1097


>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Glycine max]
          Length = 1171

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 32/218 (14%)
 Frame = +3

Query: 57   GVQLPASTSTTKNYNATNLVGRTEARKRARAPHRTTGKAKP---RQTKRQRTRVGRRAAK 227
            G+Q  +S + +++  A     +   RKR R       K K    +Q +R R ++ ++ AK
Sbjct: 948  GIQQRSSKAASEDSMALVSQEKGGKRKRGRPAGSGIKKVKQPAVKQARRARPQIAKKPAK 1007

Query: 228  IXXXXXXXXXXXXXNQEATELNETKHTGIERTKACDPLGQVGLPDKYPLELINKQDSVEN 407
            I              +   +  +T+   ++  K      +    +   +  I K +S +N
Sbjct: 1008 ICEYESSDESDSHGKRPIEQEIDTRAGSLDFYKKRSEPQETEKRENVQVAEIEK-NSEQN 1066

Query: 408  K-----------------PELDV-------NSGQHEKLEQMADPLHAILLDMIPSLSQRK 515
            K                 PE+++       N+   EKLE  ADPL A+L DMIPSL+ +K
Sbjct: 1067 KLDKQKDLNDNERERMLVPEIEMSDRHNEQNNEVTEKLEISADPLQAMLFDMIPSLATQK 1126

Query: 516  VEG--ESSAVEGKIPQIDN-DANPV--KKKKLSYKEVA 614
            VE     S  E K+P+  N +A P+  KKKK+SYK+VA
Sbjct: 1127 VEQPMNRSVREEKLPETSNAEAEPMTTKKKKVSYKDVA 1164