BLASTX nr result
ID: Zingiber23_contig00020199
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00020199
(287 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003626418.1| Pseudouridylate synthase-like protein [Medic... 40 2e-07
ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synt... 41 3e-07
ref|XP_004494685.1| PREDICTED: multisubstrate pseudouridine synt... 41 3e-07
ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt... 39 3e-06
ref|XP_006604840.1| PREDICTED: multisubstrate pseudouridine synt... 39 3e-06
gb|EOY11113.1| Pseudouridine synthase family protein, putative i... 41 4e-06
gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [... 41 4e-06
ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synt... 39 5e-06
gb|EOY11115.1| Pseudouridine synthase family protein isoform 3 [... 41 5e-06
gb|ESW19147.1| hypothetical protein PHAVU_006G100200g [Phaseolus... 38 8e-06
>ref|XP_003626418.1| Pseudouridylate synthase-like protein [Medicago truncatula]
gi|355501433|gb|AES82636.1| Pseudouridylate
synthase-like protein [Medicago truncatula]
Length = 669
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 115 FLQEKFQVFXXXXXSGENS--KYIRVRRRSGNGGGPSKRGMKRXXXXXXPFDSRGSKSW 285
F +E F+ G ++ K IRVR SG K KR PFDSRGS++W
Sbjct: 136 FFRENFKFLVTDTVDGPDASIKCIRVRLNSGGSNNNGKNSRKRKERDTKPFDSRGSENW 194
Score = 40.0 bits (92), Expect(2) = 2e-07
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 DADALKEFIAKVLSL-ERDVPPVMLAPDPDKSHRAEVH 112
DA +L+EFI ++ + E D+ P+ L+PD DKSHR VH
Sbjct: 97 DASSLEEFINQISAGGEDDISPITLSPDSDKSHRTAVH 134
>ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
[Cicer arietinum]
Length = 698
Score = 41.2 bits (95), Expect(2) = 3e-07
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 115 FLQEKFQVFXXXXXSGEN--SKYIRVRRRSGNGGGPSKRGMKRXXXXXXPFDSRGSKSW 285
F +E F+ G + SK IRVR SG K KR PFDSRGS++W
Sbjct: 135 FFRENFKFLVTDTVDGPDASSKCIRVRLNSGGPNNKGKNSRKRKDRDNKPFDSRGSENW 193
Score = 38.5 bits (88), Expect(2) = 3e-07
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 DADALKEFIAKVLSLERDVP-PVMLAPDPDKSHRAEVH 112
DA +L+EFI ++ D P P++L+PD DKSHR VH
Sbjct: 96 DASSLEEFINQINVGGEDSPSPIILSPDSDKSHRTAVH 133
>ref|XP_004494685.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2
[Cicer arietinum]
Length = 669
Score = 41.2 bits (95), Expect(2) = 3e-07
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 115 FLQEKFQVFXXXXXSGEN--SKYIRVRRRSGNGGGPSKRGMKRXXXXXXPFDSRGSKSW 285
F +E F+ G + SK IRVR SG K KR PFDSRGS++W
Sbjct: 135 FFRENFKFLVTDTVDGPDASSKCIRVRLNSGGPNNKGKNSRKRKDRDNKPFDSRGSENW 193
Score = 38.5 bits (88), Expect(2) = 3e-07
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 DADALKEFIAKVLSLERDVP-PVMLAPDPDKSHRAEVH 112
DA +L+EFI ++ D P P++L+PD DKSHR VH
Sbjct: 96 DASSLEEFINQINVGGEDSPSPIILSPDSDKSHRTAVH 133
>ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
[Glycine max]
Length = 687
Score = 39.3 bits (90), Expect(2) = 3e-06
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 115 FLQEKFQVFXXXXXSGEN--SKYIRVRRRSGNGGGPSKRGMKRXXXXXXPFDSRGSKSW 285
F +E F+ +G + SK IRVR S K KR PFDSRGS++W
Sbjct: 126 FFKENFKFLVTDVVNGPDASSKCIRVRLNSAEPNNKGKNSKKRKERDDKPFDSRGSENW 184
Score = 37.0 bits (84), Expect(2) = 3e-06
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 DADALKEFIAKVLSLERD-VPPVMLAPDPDKSHRAEVH 112
DA L+EFI K+ + D V P++L+PD DKSHR +H
Sbjct: 87 DAILLEEFINKINAGGEDSVSPIVLSPDSDKSHRKAMH 124
>ref|XP_006604840.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2
[Glycine max]
Length = 676
Score = 39.3 bits (90), Expect(2) = 3e-06
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 115 FLQEKFQVFXXXXXSGEN--SKYIRVRRRSGNGGGPSKRGMKRXXXXXXPFDSRGSKSW 285
F +E F+ +G + SK IRVR S K KR PFDSRGS++W
Sbjct: 115 FFKENFKFLVTDVVNGPDASSKCIRVRLNSAEPNNKGKNSKKRKERDDKPFDSRGSENW 173
Score = 37.0 bits (84), Expect(2) = 3e-06
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 DADALKEFIAKVLSLERD-VPPVMLAPDPDKSHRAEVH 112
DA L+EFI K+ + D V P++L+PD DKSHR +H
Sbjct: 76 DAILLEEFINKINAGGEDSVSPIVLSPDSDKSHRKAMH 113
>gb|EOY11113.1| Pseudouridine synthase family protein, putative isoform 1
[Theobroma cacao]
Length = 763
Score = 41.2 bits (95), Expect(2) = 4e-06
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 DADALKEFIAKVLS-LERDVPPVMLAPDPDKSHRAEVH 112
DAD L+ FI ++ S E D+ P++L+PD DKSHR +H
Sbjct: 141 DADRLEAFINQITSGSEEDICPIVLSPDSDKSHRTAMH 178
Score = 34.7 bits (78), Expect(2) = 4e-06
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +1
Query: 127 KFQVFXXXXXSGENSKYIRVRRRSGNGGGPSKRGMKRXXXXXXPFDSRGSKSW 285
+F V +SK IRVR SGN + KR P+DSRGS W
Sbjct: 186 RFLVTDTVDGPDSSSKCIRVRLNSGNNN-KGRNSKKRKERGDKPYDSRGSSHW 237
>gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
Length = 732
Score = 41.2 bits (95), Expect(2) = 4e-06
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 DADALKEFIAKVLS-LERDVPPVMLAPDPDKSHRAEVH 112
DAD L+ FI ++ S E D+ P++L+PD DKSHR +H
Sbjct: 128 DADRLEAFINQITSGSEEDICPIVLSPDSDKSHRTAMH 165
Score = 34.7 bits (78), Expect(2) = 4e-06
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +1
Query: 127 KFQVFXXXXXSGENSKYIRVRRRSGNGGGPSKRGMKRXXXXXXPFDSRGSKSW 285
+F V +SK IRVR SGN + KR P+DSRGS W
Sbjct: 173 RFLVTDTVDGPDSSSKCIRVRLNSGNNN-KGRNSKKRKERGDKPYDSRGSSHW 224
>ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine
max]
Length = 690
Score = 38.9 bits (89), Expect(2) = 5e-06
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 115 FLQEKFQVFXXXXXSGEN--SKYIRVRRRSGNGGGPSKRGMKRXXXXXXPFDSRGSKSW 285
F +E F+ G + SK IRVR S K KR PFDSRGS++W
Sbjct: 129 FFKENFKFLVTDVVDGPDASSKCIRVRLNSAEPNNKGKNSKKRKERGDKPFDSRGSENW 187
Score = 37.0 bits (84), Expect(2) = 5e-06
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 DADALKEFIAKVLSLERD-VPPVMLAPDPDKSHRAEVH 112
DA L+EFI K+ + D V P++L+PD DKSHR +H
Sbjct: 90 DAVLLEEFINKINAGGEDGVSPIVLSPDSDKSHRKAMH 127
>gb|EOY11115.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
Length = 672
Score = 41.2 bits (95), Expect(2) = 5e-06
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 DADALKEFIAKVLS-LERDVPPVMLAPDPDKSHRAEVH 112
DAD L+ FI ++ S E D+ P++L+PD DKSHR +H
Sbjct: 128 DADRLEAFINQITSGSEEDICPIVLSPDSDKSHRTAMH 165
Score = 34.7 bits (78), Expect(2) = 5e-06
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +1
Query: 127 KFQVFXXXXXSGENSKYIRVRRRSGNGGGPSKRGMKRXXXXXXPFDSRGSKSW 285
+F V +SK IRVR SGN + KR P+DSRGS W
Sbjct: 173 RFLVTDTVDGPDSSSKCIRVRLNSGNNN-KGRNSKKRKERGDKPYDSRGSSHW 224
>gb|ESW19147.1| hypothetical protein PHAVU_006G100200g [Phaseolus vulgaris]
Length = 691
Score = 37.7 bits (86), Expect(2) = 8e-06
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 115 FLQEKFQVFXXXXXSGENS--KYIRVRRRSGNGGGPSKRGMKRXXXXXXPFDSRGSKSW 285
F +E F+ G ++ K IRVR S K KR PFDSRGS++W
Sbjct: 129 FFKENFKFLVTDVVDGPDASLKCIRVRLNSAEPNNKGKNSKKRKERGDKPFDSRGSENW 187
Score = 37.4 bits (85), Expect(2) = 8e-06
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2
Query: 2 DADALKEFIAKV-LSLERDVPPVMLAPDPDKSHRAEVH 112
DA L+EF+ K+ E V P++L+PD DKSHR VH
Sbjct: 90 DAILLEEFVNKINAGGEVSVSPIVLSPDSDKSHRKAVH 127