BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00020028
         (1005 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB28864.1| hypothetical protein L484_015797 [Morus notabilis]     102   3e-19
emb|CAH66114.1| OSIGBa0145B03.2 [Oryza sativa Indica Group]            97   8e-18
emb|CAH66198.1| OSIGBa0148D14.4 [Oryza sativa Indica Group]            97   1e-17
emb|CAD41692.1| OSJNBb0015D13.7 [Oryza sativa Japonica Group]          97   1e-17
gb|ABA97877.1| retrotransposon protein, putative, unclassified [...    96   2e-17
gb|ABA97876.1| retrotransposon protein, putative, unclassified [...    96   2e-17
gb|AAM74314.2|AC114474_6 Putative retroelement [Oryza sativa Jap...    96   2e-17
gb|AAM01095.1|AC092748_33 Putative retroelement [Oryza sativa Ja...    96   2e-17
ref|XP_006833015.1| hypothetical protein AMTR_s00876p00007370, p...    96   3e-17
emb|CAE02926.1| OSJNBb0108J11.19 [Oryza sativa Japonica Group] g...    96   3e-17
gb|ABF95988.1| retrotransposon protein, putative, unclassified [...    96   3e-17
gb|ABA96173.1| retrotransposon protein, putative, unclassified [...    95   4e-17
gb|AAK52169.1|AC084831_23 putative polyprotein [Oryza sativa Jap...    95   5e-17
gb|AAX95257.1| retrotransposon protein, putative, Ty3-gypsy sub-...    95   5e-17
gb|ABF97067.1| retrotransposon protein, putative, Ty3-gypsy subc...    95   5e-17
gb|AAT85127.1| putative polyprotein [Oryza sativa Japonica Group]      95   5e-17
emb|CAE05578.3| OSJNBa0032N05.6 [Oryza sativa Japonica Group]          95   5e-17
gb|AAO39883.1| putative polyprotein [Oryza sativa Japonica Group...    94   6e-17
gb|AAL31659.1|AC079179_14 Putative polyprotein [Oryza sativa] gi...    94   6e-17
gb|AAM74296.1|AC083944_14 Putative retroelement [Oryza sativa Ja...    94   6e-17

>gb|EXB28864.1| hypothetical protein L484_015797 [Morus notabilis]
          Length = 406

 Score =  102 bits (253), Expect = 3e-19
 Identities = 52/133 (39%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
 Frame = +2

Query: 458 YLIQWQ------RIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGD 619
           Y I W+      R  P  F G+++P +A+ W  +L++ ++ +D  EQEKV CAS+ L  D
Sbjct: 274 YFIFWRGLTEELRTMPLEFEGSTDPLEAEEWLTSLQTILDFMDLTEQEKVICASYVLKKD 333

Query: 620 ARMWWERVRAKRPVNQMTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKF 799
           AR WWE V  +R V  MTW +                    EF   +QG+++V EA +KF
Sbjct: 334 ARYWWETVVMRRNVATMTWNEFLGEFNAKYYDTVGFRAQQTEFNNLKQGDMTVMEACRKF 393

Query: 800 NRLARLCPELVST 838
           +RLARLCP+LV T
Sbjct: 394 DRLARLCPQLVPT 406


>emb|CAH66114.1| OSIGBa0145B03.2 [Oryza sativa Indica Group]
          Length = 371

 Score = 97.4 bits (241), Expect = 8e-18
 Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
 Frame = +2

Query: 461 LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
           L  + R++P  FS T+ P +A  W  T+E  +ELL   +QEKV  AS  L G A  WW+ 
Sbjct: 56  LADFLRVRPPTFSSTTNPVEAGDWLHTIEKKLELLQCTDQEKVVFASHQLQGPASEWWDH 115

Query: 641 VRAKRPVNQ-MTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
            R  R   Q +TWAD             V +    EF   +Q + +V E + +FNRLAR 
Sbjct: 116 FRMNRAEGQSITWADFTEAFKKTHIPTGVVSLKKREFRALKQKDQTVAEYLHEFNRLARY 175

Query: 818 CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQ 994
            PE V T++ER    L+ L+ E+++ +    H     ++LV  A+  E  +N +  +K+
Sbjct: 176 APEDVRTDEERQEKFLEGLKDELSVTLIS--HDYADFQQLVDKAIRLEDKKNRMDNRKR 232


>emb|CAH66198.1| OSIGBa0148D14.4 [Oryza sativa Indica Group]
          Length = 1516

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 1/181 (0%)
 Frame = +2

Query: 461  LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
            L+ + RI+P  FS T+ P +A  W + +E  + LL   ++EKV  A+  L G A  WW+ 
Sbjct: 81   LLDFLRIQPPTFSSTTNPMEANDWLRAIEKKLNLLQCNDREKVAFATHQLQGPASAWWDN 140

Query: 641  VRAKRP-VNQMTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
              A RP   ++TWA+             +  +   EF   +QG  +V E + +FNRLAR 
Sbjct: 141  YVATRPDATEVTWAEFCQSFRKAQIPEGIMAQQKREFRALQQGTRTVTEYLHEFNRLARY 200

Query: 818  CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQV 997
             PE V T+ E+    L  L  E+   +  G++  +  E+LV  A+  E  +N I ++++ 
Sbjct: 201  APEDVRTDAEKQEKFLFGLDDELTNQLISGVY--EDFEKLVDKAIRQEEQRNKIDRKRKT 258

Query: 998  S 1000
            +
Sbjct: 259  A 259


>emb|CAD41692.1| OSJNBb0015D13.7 [Oryza sativa Japonica Group]
          Length = 1516

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 1/181 (0%)
 Frame = +2

Query: 461  LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
            L+ + RI+P  FS T+ P +A  W + +E  + LL   +QEKV  A+  L G A  WW+ 
Sbjct: 81   LLDFLRIQPPTFSSTTNPMEANDWLRAIEKKLNLLQCNDQEKVAFATHQLQGPASAWWDN 140

Query: 641  VRAKR-PVNQMTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
              A R    ++TWA+             +  +   EF   +QG +SV E + +FNRLAR 
Sbjct: 141  YVATRLDATEVTWAEFCQSFRKAQIPEGIMAQQKREFRALQQGTMSVTEYLHEFNRLARY 200

Query: 818  CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQV 997
             PE V T+ E+    L  L  E+   +  G++  +  E+LV  A+  E  +N + ++++ 
Sbjct: 201  APEDVRTDAEKQEKFLFGLDDELTNQLISGVY--EDFEKLVDKAIRQEEQRNKMDRKRKA 258

Query: 998  S 1000
            +
Sbjct: 259  A 259


>gb|ABA97877.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 310

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
 Frame = +2

Query: 461 LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
           L  + R++P  FS T+ P +A  W  T+E  +ELL   +QEKV  AS  L G A  WW+ 
Sbjct: 56  LTDFLRVRPPTFSSTTNPVEAGDWLHTIEKKLELLQCTDQEKVVFASHQLQGSASEWWDH 115

Query: 641 VRAKRPVNQ-MTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
            R  R   Q +TWA+             V +    EF   +Q + +V E + +FNRLAR 
Sbjct: 116 FRMNRAEGQTITWAEFTEAFKETHIPAGVVSLKKHEFRALKQKDHTVAEYLHEFNRLARY 175

Query: 818 CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQ 994
            PE V T++ER    L+ L+ E+++ +    H     ++LV  A+  E  +N +  +K+
Sbjct: 176 APEDVRTDEERQEKFLEGLKDELSVTLIS--HDYVDFQQLVDKAIRLEDKKNRMDNRKR 232


>gb|ABA97876.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 310

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
 Frame = +2

Query: 461 LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
           L  + R++P  FS T+ P +A  W  T+E  +ELL   +QEKV  AS  L G A  WW+ 
Sbjct: 56  LTDFLRVRPPTFSSTTNPVEAGDWLHTIEKKLELLQCTDQEKVVFASHQLQGSASEWWDH 115

Query: 641 VRAKRPVNQ-MTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
            R  R   Q +TWA+             V +    EF   +Q + +V E + +FNRLAR 
Sbjct: 116 FRMNRAEGQPITWAEFTEAFKETHIPAGVVSLKKHEFRALKQKDHTVAEYLHEFNRLARY 175

Query: 818 CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQ 994
            PE V T++ER    L+ L+ E+++ +    H     ++LV  A+  E  +N +  +K+
Sbjct: 176 APEDVRTDEERQEKFLEGLKDELSVTLIS--HDYVDFQQLVDKAIRLEDKKNRMDNRKR 232


>gb|AAM74314.2|AC114474_6 Putative retroelement [Oryza sativa Japonica Group]
           gi|78708436|gb|ABB47411.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 1223

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 60/179 (33%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
 Frame = +2

Query: 461 LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
           L  +QR++P  FS T+ P +A  W   +E  ++L+   EQEKV  AS  L G A  WW+ 
Sbjct: 130 LADFQRVRPPTFSSTTNPVEAGDWLHAIEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 189

Query: 641 VRAKRPVNQ-MTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
            R  R V + +TW +             V      EF    QG+ SV E +  FNRLAR 
Sbjct: 190 FRQNRAVGEPITWREFTAAFKKTHIPSGVVALKKREFRALNQGSCSVIEYLHDFNRLARY 249

Query: 818 CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQ 994
            PE V T++ER    L+ L  E++  +    +R    ++LV  A+  E   N ++Q+K+
Sbjct: 250 APEDVRTDEERQEKFLEGLNDELSYALMAMEYR--DFQQLVDKAIRQEDKYNRMEQKKR 306


>gb|AAM01095.1|AC092748_33 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1240

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 60/179 (33%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
 Frame = +2

Query: 461 LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
           L  +QR++P  FS T+ P +A  W   +E  ++L+   EQEKV  AS  L G A  WW+ 
Sbjct: 130 LADFQRVRPPTFSSTTNPVEAGDWLHAIEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 189

Query: 641 VRAKRPVNQ-MTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
            R  R V + +TW +             V      EF    QG+ SV E +  FNRLAR 
Sbjct: 190 FRQNRAVGEPITWREFTAAFKKTHIPSGVVALKKREFRALNQGSCSVIEYLHDFNRLARY 249

Query: 818 CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQ 994
            PE V T++ER    L+ L  E++  +    +R    ++LV  A+  E   N ++Q+K+
Sbjct: 250 APEDVRTDEERQEKFLEGLNDELSYALMAMEYR--DFQQLVDKAIRQEDKYNRMEQKKR 306


>ref|XP_006833015.1| hypothetical protein AMTR_s00876p00007370, partial [Amborella
           trichopoda] gi|548837601|gb|ERM98293.1| hypothetical
           protein AMTR_s00876p00007370, partial [Amborella
           trichopoda]
          Length = 366

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 51/161 (31%), Positives = 84/161 (52%)
 Frame = +2

Query: 467 QWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWERVR 646
           ++++  P NF G S+P +A+ W +T+E  +E +     + V CA+  L  DAR+WW+ ++
Sbjct: 107 RFRKQHPPNFEGGSDPMEAEEWLRTVEGIVEYMRLGNGDSVACAASLLKKDARIWWDVIK 166

Query: 647 AKRPVNQMTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARLCPE 826
             R V  MTWAD             + +   +EFT  RQG  +V E  ++F+RLA+   +
Sbjct: 167 QTRDVAAMTWADFVQVFNKKYYSEAIRSARVNEFTNLRQGKSTVTEYARQFDRLAKFATD 226

Query: 827 LVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSA 949
           LV TE  R+    + L   I+ ++A    R  T  E  ++A
Sbjct: 227 LVPTEFLRIHRFTEGLDSRISRDIAMSGVRATTYAEKDNTA 267


>emb|CAE02926.1| OSJNBb0108J11.19 [Oryza sativa Japonica Group]
            gi|32489278|emb|CAE04619.1| OSJNBa0028I23.1 [Oryza sativa
            Japonica Group]
          Length = 1516

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 1/181 (0%)
 Frame = +2

Query: 461  LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
            L+ + RI+P  FS T+ P +A  W + +E  + LL   +QEKV  A+  L G A  WW+ 
Sbjct: 81   LLDFLRIQPPTFSSTTNPMEANDWLRAIEKKLNLLQCNDQEKVAFATHQLQGPASAWWDN 140

Query: 641  VRAKR-PVNQMTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
              A R    ++TWA+             +  +   EF   +QG +SV E + +FNRLAR 
Sbjct: 141  YVATRLDATEVTWAEFCQSFRKAQIPEGIMAQQKREFRALQQGTMSVTEYLHEFNRLARY 200

Query: 818  CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQV 997
             PE V T+ E+    L  L  E+   +  G++  +  E+LV  A+  +  +N + ++++ 
Sbjct: 201  APEDVRTDAEKQEKFLFGLDDELTNQLISGVY--EDFEKLVDKAIRQDEQRNKMDRKRKA 258

Query: 998  S 1000
            +
Sbjct: 259  A 259


>gb|ABF95988.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 365

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 60/179 (33%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
 Frame = +2

Query: 461 LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
           L  + R+KP  FS T+ P +A  W  T+E  +ELL   +QEKV   S  L G A  WW+ 
Sbjct: 56  LADFLRVKPPTFSSTTNPVEAGDWLHTIEKKLELLQCTDQEKVVFTSHQLQGPASEWWDH 115

Query: 641 VRAKRPVNQ-MTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
            R  R   Q +TWA+             V      EF   +Q + +V E + +FNRLAR 
Sbjct: 116 FRMNRAEGQPITWAEFTEAFKKTHIPAGVVALKKREFRALKQKDRTVTEYLHEFNRLARY 175

Query: 818 CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQ 994
            PE V T++ER    L+ L+ E+ + +    H  +  +ELV  A+  E  +N +  +K+
Sbjct: 176 APEDVRTDEERQEKFLEGLKDELTVMLIS--HDYEDFQELVDKAIRLEDKKNRMDNRKR 232


>gb|ABA96173.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 395

 Score = 95.1 bits (235), Expect = 4e-17
 Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
 Frame = +2

Query: 461 LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
           L  + R++P  FS T+ P +A  W   +E  +ELL   +QEKV  AS  L G A  WW+ 
Sbjct: 130 LTDFLRVRPPTFSSTTNPVEAGDWLHAVEKKLELLQCTDQEKVVFASHQLQGPASEWWDH 189

Query: 641 VRAKRPVNQ-MTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
            R  R   Q +TWAD             V +    EF   +Q + +V E + +FNRLAR 
Sbjct: 190 FRMNRAEGQPITWADFTEAFKKTHIPTGVVSLKKREFRALKQKDQTVAEYLHEFNRLARY 249

Query: 818 CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQ 994
            PE V T++ER    L+ L+ E+++ +    H     ++LV  A+  E  +N +  +K+
Sbjct: 250 APEDVRTDEERQEKFLEGLKDELSVTLIS--HDYADFQQLVDKAIRLEDKKNRMDNRKR 306


>gb|AAK52169.1|AC084831_23 putative polyprotein [Oryza sativa Japonica Group]
           gi|24796793|gb|AAN64470.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1473

 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
 Frame = +2

Query: 461 LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
           L+++ R++P  FS T+ P +A  W   +E  ++LL   +QEKV  AS  L G A  WW+ 
Sbjct: 314 LVEFLRVRPPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 373

Query: 641 VRAKRPVNQ-MTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
            R  R   + +TW +             V +    EF    QG+ SV E + +FNRLAR 
Sbjct: 374 FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 433

Query: 818 CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQ 994
            PE V T+++R    L+ L  E++  +  G +     ++LV  A+  E   N ++Q+K+
Sbjct: 434 APEDVRTDEQRQERFLEGLNDELSYPLMTGDY--HDFQKLVDKAIRQEDKYNRMEQKKR 490


>gb|AAX95257.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|77550597|gb|ABA93394.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1214

 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
 Frame = +2

Query: 461 LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
           L ++ R++P  FS T+ P +A  W   +E  ++LL   +QEKV  AS  L G A  WW+ 
Sbjct: 316 LAEFLRVRPPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 375

Query: 641 VRAKRPVNQ-MTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
            R  R   + +TW +             V +    EF    QG+ SV E + +FNRLAR 
Sbjct: 376 FRLNRTTTEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 435

Query: 818 CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQ 994
            PE V T++ER    L+ L  E++  +  G +     ++LV  A+  E   N ++Q+K+
Sbjct: 436 APEDVRTDEERQEKFLEGLNDELSYPLMTGDY--PDFQKLVDKAIRQEDKYNRMEQKKR 492


>gb|ABF97067.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1475

 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
 Frame = +2

Query: 461 LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
           L+++ R++P  FS T+ P +A  W   +E  ++LL   +QEKV  AS  L G A  WW+ 
Sbjct: 314 LVEFLRVRPPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 373

Query: 641 VRAKRPVNQ-MTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
            R  R   + +TW +             V +    EF    QG+ SV E + +FNRLAR 
Sbjct: 374 FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 433

Query: 818 CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQ 994
            PE V T+++R    L+ L  E++  +  G +     ++LV  A+  E   N ++Q+K+
Sbjct: 434 APEDVRTDEQRQERFLEGLNDELSYPLMTGDY--HDFQKLVDKAIRQEDKYNRMEQKKR 490


>gb|AAT85127.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1524

 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
 Frame = +2

Query: 461  LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
            L+++ R+KP  FS T+ P +A  W   +E  + LL   EQEKV  A+  L G A +WW+ 
Sbjct: 93   LLEFLRVKPPTFSSTTNPIEAHDWLHAIEKKLNLLQCNEQEKVAFATHQLQGPASIWWDN 152

Query: 641  VRAKRPVN-QMTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
                RP   ++TW +             +  +   EF   +QG  +V E + +FNRLAR 
Sbjct: 153  YMVTRPAGAEVTWTEFRHSFNKAQVPEGIVAQKKREFRSLQQGTRTVIEYLHEFNRLARY 212

Query: 818  CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQV 997
             PE V T+ ER    L  L  E+   +    +  +  E+LV  A+  E + N I ++++ 
Sbjct: 213  APEDVRTDAERQEKFLSGLDDELTNQLISRDY--EDFEKLVDKAIRQEEHGNKINRKRKA 270

Query: 998  S 1000
            +
Sbjct: 271  A 271


>emb|CAE05578.3| OSJNBa0032N05.6 [Oryza sativa Japonica Group]
          Length = 1528

 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
 Frame = +2

Query: 461 LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
           L ++ R++P  FS T+ P +A  W   +E  ++LL   +QEKV  AS+ L G A  WW+ 
Sbjct: 180 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASYQLHGPASEWWDH 239

Query: 641 VRAKRPVNQ-MTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
            R  R   + +TW +             V +    EF    QG+ SV E + +FNRLAR 
Sbjct: 240 FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 299

Query: 818 CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQ 994
            PE V T++ER    L+ L  E++  +  G +     ++LV  A+  E   N ++Q+K+
Sbjct: 300 APEDVRTDEERQEKFLEGLNDELSYPLMTGDY--SDFQKLVDKAIRQEDKYNRMEQKKR 356


>gb|AAO39883.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711890|gb|ABF99685.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 371

 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
 Frame = +2

Query: 461 LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
           L  + R++P  FS T+ P +A  W  T+E  +ELL   +QEKV  AS  L G A  WW+ 
Sbjct: 56  LADFLRVRPPTFSSTTNPVEAGDWLHTIEKKLELLQCTDQEKVVFASHQLQGPASEWWDH 115

Query: 641 VRAKRPVNQ-MTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
            R  R   Q +TW +           + V +    EF   +Q + +V E + +FNRLAR 
Sbjct: 116 FRMNRAEGQPITWVEFTEAFKKTHIPVGVVSLKKREFRTLKQKDHTVAEYLHEFNRLARY 175

Query: 818 CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQ 994
            PE V T++ER    L+ L+ E+++ +    H     ++LV  A+  E  +N +  +K+
Sbjct: 176 APEDVRTDEERQEKFLEGLKDELSVTLIS--HDYVDFQQLVDKAIRLEDKKNRMDNRKR 232


>gb|AAL31659.1|AC079179_14 Putative polyprotein [Oryza sativa]
           gi|20042885|gb|AAM08713.1|AC116601_6 Putative
           polyprotein [Oryza sativa Japonica Group]
           gi|31429918|gb|AAP51902.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 371

 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
 Frame = +2

Query: 461 LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
           L  + R++P  FS T+ P +A  W   +E  +ELL   +QEKV  AS  L G A  WW+ 
Sbjct: 56  LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLELLQCTDQEKVVFASHQLQGPASEWWDH 115

Query: 641 VRAKRPVNQ-MTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
            R  R   Q +TWAD             V +    EF   +Q + +V E + +FNRLAR 
Sbjct: 116 FRMNRAEGQPITWADFTEAFEKTHIPTGVVSLKKREFRALKQRDHTVAEYLHEFNRLARY 175

Query: 818 CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQ 994
            PE V T++ER    L+ L+ E+++ +    H     ++LV  A+  E  +N +  +K+
Sbjct: 176 APEDVRTDEERQEKFLEGLKDELSVTLIS--HDYVDFQQLVDKAIRLEDKKNRMDNRKR 232


>gb|AAM74296.1|AC083944_14 Putative retroelement [Oryza sativa Japonica Group]
           gi|31430529|gb|AAP52431.1| retrotransposon protein,
           putative, unclassified, expressed [Oryza sativa Japonica
           Group]
          Length = 365

 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
 Frame = +2

Query: 461 LIQWQRIKPENFSGTSEPWDAQAWFKTLESTMELLDWPEQEKVKCASFCLTGDARMWWER 640
           L  + R++P  FS T+ P +A  W   +E  +ELL   +QEKV  AS  L G A  WW+ 
Sbjct: 56  LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLELLQCTDQEKVVFASHQLQGSASEWWDH 115

Query: 641 VRAKRPVNQ-MTWADXXXXXXXXXXHMRVTNRHYDEFTEFRQGNLSVEEAVKKFNRLARL 817
            R  R   Q +TWA+             V      EF   +Q + +V E + +FNRLAR 
Sbjct: 116 FRMNRAEGQPITWAEFTEAFKKTHIPAGVVALKKREFRALKQKDRTVTEYLHEFNRLARY 175

Query: 818 CPELVSTEKERVRLMLKMLRPEIAMNVAGGIHRPQTTEELVSSALITEHYQNSIKQQKQ 994
            PE V T++ER    L+ L+ E+++ +    H  +  +ELV  A+  E  +N +  +K+
Sbjct: 176 APEDVRTDEERQEKFLEGLKDELSVMLIS--HDYEDFQELVDKAIRLEDKKNRMDNRKR 232