BLASTX nr result

ID: Zingiber23_contig00018844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00018844
         (195 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX96719.1| Small nuclear ribonucleoprotein family protein [T...   128   7e-28
gb|ESW30655.1| hypothetical protein PHAVU_002G171900g [Phaseolus...   127   2e-27
ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like prote...   126   3e-27
ref|XP_006850146.1| hypothetical protein AMTR_s00022p00235920 [A...   126   3e-27
ref|XP_004516147.1| PREDICTED: U6 snRNA-associated Sm-like prote...   126   3e-27
emb|CBI24863.3| unnamed protein product [Vitis vinifera]              126   3e-27
ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like prote...   126   3e-27
gb|EPS60933.1| hypothetical protein M569_13864, partial [Genlise...   125   5e-27
ref|XP_003623155.1| U6 snRNA-associated Sm-like protein LSm7 [Me...   125   6e-27
ref|NP_001235908.1| uncharacterized protein LOC100306498 [Glycin...   125   6e-27
gb|AFK41594.1| unknown [Medicago truncatula]                          125   6e-27
ref|XP_002299952.1| small nuclear ribonucleoprotein [Populus tri...   125   8e-27
gb|AFK37807.1| unknown [Lotus japonicus]                              124   1e-26
ref|XP_002513176.1| conserved hypothetical protein [Ricinus comm...   124   1e-26
ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like prote...   124   2e-26
gb|EMJ19843.1| hypothetical protein PRUPE_ppa013852mg [Prunus pe...   123   3e-26
ref|XP_006482902.1| PREDICTED: U6 snRNA-associated Sm-like prote...   122   4e-26
ref|XP_006438984.1| hypothetical protein CICLE_v10033061mg [Citr...   122   4e-26
ref|XP_004306521.1| PREDICTED: probable U6 snRNA-associated Sm-l...   122   5e-26
ref|XP_006292107.1| hypothetical protein CARUB_v10018303mg [Caps...   122   7e-26

>gb|EOX96719.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
          Length = 99

 Score =  128 bits (322), Expect = 7e-28
 Identities = 60/64 (93%), Positives = 63/64 (98%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRDPDDPLKTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPFI
Sbjct: 35  GYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFI 94

Query: 14  QPDG 3
           QPDG
Sbjct: 95  QPDG 98


>gb|ESW30655.1| hypothetical protein PHAVU_002G171900g [Phaseolus vulgaris]
          Length = 99

 Score =  127 bits (318), Expect = 2e-27
 Identities = 59/64 (92%), Positives = 63/64 (98%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRDPDDPLKTTDQTR+LGLI+CRGTAVMLVSPTDGT+EI NPFI
Sbjct: 35  GYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFI 94

Query: 14  QPDG 3
           QPDG
Sbjct: 95  QPDG 98


>ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
           max]
          Length = 99

 Score =  126 bits (317), Expect = 3e-27
 Identities = 59/64 (92%), Positives = 62/64 (96%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRDPDDPLKTTDQTR LGLI+CRGTAVMLVSPTDGT+EI NPFI
Sbjct: 35  GYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFI 94

Query: 14  QPDG 3
           QPDG
Sbjct: 95  QPDG 98


>ref|XP_006850146.1| hypothetical protein AMTR_s00022p00235920 [Amborella trichopoda]
           gi|548853744|gb|ERN11727.1| hypothetical protein
           AMTR_s00022p00235920 [Amborella trichopoda]
          Length = 147

 Score =  126 bits (316), Expect = 3e-27
 Identities = 59/64 (92%), Positives = 62/64 (96%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTR LGLI+CRGTAVMLVSPTDGT+EI NPF+
Sbjct: 83  GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRPLGLIVCRGTAVMLVSPTDGTDEISNPFV 142

Query: 14  QPDG 3
           QPDG
Sbjct: 143 QPDG 146


>ref|XP_004516147.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Cicer
           arietinum]
          Length = 99

 Score =  126 bits (316), Expect = 3e-27
 Identities = 59/64 (92%), Positives = 62/64 (96%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRDPDDPLKTTDQTR LGLI+CRGTAVMLVSPTDGT+EI NPFI
Sbjct: 35  GYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFI 94

Query: 14  QPDG 3
           QPDG
Sbjct: 95  QPDG 98


>emb|CBI24863.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score =  126 bits (316), Expect = 3e-27
 Identities = 59/64 (92%), Positives = 62/64 (96%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRDPDDP KTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPFI
Sbjct: 43  GYDQLLNLVLDEAVEFLRDPDDPQKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFI 102

Query: 14  QPDG 3
           QPDG
Sbjct: 103 QPDG 106


>ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
           [Vitis vinifera] gi|359487265|ref|XP_003633552.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 2 [Vitis vinifera]
           gi|359487267|ref|XP_003633553.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm7-like isoform 3
           [Vitis vinifera] gi|359487269|ref|XP_003633554.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 4 [Vitis vinifera]
          Length = 99

 Score =  126 bits (316), Expect = 3e-27
 Identities = 59/64 (92%), Positives = 62/64 (96%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRDPDDP KTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPFI
Sbjct: 35  GYDQLLNLVLDEAVEFLRDPDDPQKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFI 94

Query: 14  QPDG 3
           QPDG
Sbjct: 95  QPDG 98


>gb|EPS60933.1| hypothetical protein M569_13864, partial [Genlisea aurea]
          Length = 98

 Score =  125 bits (315), Expect = 5e-27
 Identities = 58/64 (90%), Positives = 63/64 (98%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEAIE+LRDP+DPLKTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPF+
Sbjct: 34  GYDQLLNLVLDEAIEYLRDPEDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFV 93

Query: 14  QPDG 3
           QPDG
Sbjct: 94  QPDG 97


>ref|XP_003623155.1| U6 snRNA-associated Sm-like protein LSm7 [Medicago truncatula]
           gi|355498170|gb|AES79373.1| U6 snRNA-associated Sm-like
           protein LSm7 [Medicago truncatula]
          Length = 130

 Score =  125 bits (314), Expect = 6e-27
 Identities = 58/64 (90%), Positives = 62/64 (96%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRDPDDPLKTTDQTR LGLI+CRGTAVMLVSPTDGT+EI NPF+
Sbjct: 66  GYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFL 125

Query: 14  QPDG 3
           QPDG
Sbjct: 126 QPDG 129


>ref|NP_001235908.1| uncharacterized protein LOC100306498 [Glycine max]
           gi|255628715|gb|ACU14702.1| unknown [Glycine max]
          Length = 99

 Score =  125 bits (314), Expect = 6e-27
 Identities = 58/64 (90%), Positives = 62/64 (96%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRDPDDPLKTTDQTR LGLI+CRGTAVMLVSPTDGT+EI NPF+
Sbjct: 35  GYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFM 94

Query: 14  QPDG 3
           QPDG
Sbjct: 95  QPDG 98


>gb|AFK41594.1| unknown [Medicago truncatula]
          Length = 99

 Score =  125 bits (314), Expect = 6e-27
 Identities = 58/64 (90%), Positives = 62/64 (96%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRDPDDPLKTTDQTR LGLI+CRGTAVMLVSPTDGT+EI NPF+
Sbjct: 35  GYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFL 94

Query: 14  QPDG 3
           QPDG
Sbjct: 95  QPDG 98


>ref|XP_002299952.1| small nuclear ribonucleoprotein [Populus trichocarpa]
           gi|224104033|ref|XP_002313290.1| small nuclear
           ribonucleoprotein [Populus trichocarpa]
           gi|566151331|ref|XP_006369638.1| hypothetical protein
           POPTR_0001s27630g [Populus trichocarpa]
           gi|118483640|gb|ABK93714.1| unknown [Populus
           trichocarpa] gi|222847210|gb|EEE84757.1| small nuclear
           ribonucleoprotein [Populus trichocarpa]
           gi|222849698|gb|EEE87245.1| small nuclear
           ribonucleoprotein [Populus trichocarpa]
           gi|550348327|gb|ERP66207.1| hypothetical protein
           POPTR_0001s27630g [Populus trichocarpa]
          Length = 99

 Score =  125 bits (313), Expect = 8e-27
 Identities = 58/64 (90%), Positives = 62/64 (96%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRD DDPLKTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPF+
Sbjct: 35  GYDQLLNLVLDEAVEFLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFV 94

Query: 14  QPDG 3
           QPDG
Sbjct: 95  QPDG 98


>gb|AFK37807.1| unknown [Lotus japonicus]
          Length = 99

 Score =  124 bits (311), Expect = 1e-26
 Identities = 58/64 (90%), Positives = 62/64 (96%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRDPDDPLKTT QTR LGLI+CRGTAVMLVSPTDGT+EI+NPFI
Sbjct: 35  GYDQLLNLVLDEAVEFLRDPDDPLKTTAQTRSLGLIVCRGTAVMLVSPTDGTDEIENPFI 94

Query: 14  QPDG 3
           QPDG
Sbjct: 95  QPDG 98


>ref|XP_002513176.1| conserved hypothetical protein [Ricinus communis]
           gi|223547674|gb|EEF49167.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score =  124 bits (311), Expect = 1e-26
 Identities = 58/64 (90%), Positives = 62/64 (96%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+E+LRDPDDPLKTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPFI
Sbjct: 35  GYDQLLNLVLDEAVEYLRDPDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFI 94

Query: 14  QPDG 3
           Q DG
Sbjct: 95  QQDG 98


>ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
           [Cucumis sativus] gi|449463765|ref|XP_004149602.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 2 [Cucumis sativus]
           gi|449530742|ref|XP_004172352.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm7-like isoform 1
           [Cucumis sativus] gi|449530744|ref|XP_004172353.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 2 [Cucumis sativus]
          Length = 99

 Score =  124 bits (310), Expect = 2e-26
 Identities = 58/64 (90%), Positives = 61/64 (95%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRDPDDPLKTTDQTR LGLI+CRGTAVMLVSP DGT+EI NPFI
Sbjct: 35  GYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRPLGLIVCRGTAVMLVSPVDGTDEIANPFI 94

Query: 14  QPDG 3
           QPDG
Sbjct: 95  QPDG 98


>gb|EMJ19843.1| hypothetical protein PRUPE_ppa013852mg [Prunus persica]
          Length = 99

 Score =  123 bits (308), Expect = 3e-26
 Identities = 58/64 (90%), Positives = 61/64 (95%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRD DDPLKTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPF 
Sbjct: 35  GYDQLLNLVLDEAVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFS 94

Query: 14  QPDG 3
           QPDG
Sbjct: 95  QPDG 98


>ref|XP_006482902.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Citrus
           sinensis]
          Length = 99

 Score =  122 bits (307), Expect = 4e-26
 Identities = 57/64 (89%), Positives = 62/64 (96%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRD DDPLKTTDQTR+LGLI+CRGTAVMLVSPTDGT+EI NPF+
Sbjct: 35  GYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 94

Query: 14  QPDG 3
           QPDG
Sbjct: 95  QPDG 98


>ref|XP_006438984.1| hypothetical protein CICLE_v10033061mg [Citrus clementina]
           gi|557541180|gb|ESR52224.1| hypothetical protein
           CICLE_v10033061mg [Citrus clementina]
          Length = 131

 Score =  122 bits (307), Expect = 4e-26
 Identities = 57/64 (89%), Positives = 62/64 (96%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRD DDPLKTTDQTR+LGLI+CRGTAVMLVSPTDGT+EI NPF+
Sbjct: 67  GYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126

Query: 14  QPDG 3
           QPDG
Sbjct: 127 QPDG 130


>ref|XP_004306521.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm7-like
           [Fragaria vesca subsp. vesca]
          Length = 99

 Score =  122 bits (306), Expect = 5e-26
 Identities = 57/64 (89%), Positives = 61/64 (95%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EF+RD DDPLKTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPF 
Sbjct: 35  GYDQLLNLVLDEAVEFIRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFS 94

Query: 14  QPDG 3
           QPDG
Sbjct: 95  QPDG 98


>ref|XP_006292107.1| hypothetical protein CARUB_v10018303mg [Capsella rubella]
           gi|482560814|gb|EOA25005.1| hypothetical protein
           CARUB_v10018303mg [Capsella rubella]
          Length = 99

 Score =  122 bits (305), Expect = 7e-26
 Identities = 57/63 (90%), Positives = 61/63 (96%)
 Frame = -2

Query: 194 GYDQLLNLVLDEAIEFLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFI 15
           GYDQLLNLVLDEA+EFLRD DDPLKTTDQTRRLGLI+CRGTAVMLVSPTDGTEEI NPF+
Sbjct: 35  GYDQLLNLVLDEAVEFLRDHDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFV 94

Query: 14  QPD 6
           QP+
Sbjct: 95  QPE 97