BLASTX nr result
ID: Zingiber23_contig00018843
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00018843
(330 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX96719.1| Small nuclear ribonucleoprotein family protein [T... 102 7e-20
gb|ESW30655.1| hypothetical protein PHAVU_002G171900g [Phaseolus... 100 2e-19
ref|XP_004516147.1| PREDICTED: U6 snRNA-associated Sm-like prote... 100 3e-19
emb|CBI24863.3| unnamed protein product [Vitis vinifera] 100 3e-19
ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like prote... 100 3e-19
ref|XP_006850146.1| hypothetical protein AMTR_s00022p00235920 [A... 99 4e-19
gb|EPS60933.1| hypothetical protein M569_13864, partial [Genlise... 99 6e-19
ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like prote... 99 6e-19
ref|XP_003623155.1| U6 snRNA-associated Sm-like protein LSm7 [Me... 99 6e-19
gb|AFK41594.1| unknown [Medicago truncatula] 99 6e-19
ref|XP_002299952.1| small nuclear ribonucleoprotein [Populus tri... 99 8e-19
gb|AFK37807.1| unknown [Lotus japonicus] 98 1e-18
ref|NP_001235908.1| uncharacterized protein LOC100306498 [Glycin... 98 1e-18
ref|XP_002513176.1| conserved hypothetical protein [Ricinus comm... 98 1e-18
ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like prote... 97 2e-18
gb|EMJ19843.1| hypothetical protein PRUPE_ppa013852mg [Prunus pe... 97 3e-18
ref|XP_006482902.1| PREDICTED: U6 snRNA-associated Sm-like prote... 96 4e-18
ref|XP_006438984.1| hypothetical protein CICLE_v10033061mg [Citr... 96 4e-18
ref|XP_004306521.1| PREDICTED: probable U6 snRNA-associated Sm-l... 96 5e-18
ref|XP_006292107.1| hypothetical protein CARUB_v10018303mg [Caps... 94 2e-17
>gb|EOX96719.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
Length = 99
Score = 102 bits (253), Expect = 7e-20
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRDPDDPLKTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPFIQPDGA
Sbjct: 50 FLRDPDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 99
>gb|ESW30655.1| hypothetical protein PHAVU_002G171900g [Phaseolus vulgaris]
Length = 99
Score = 100 bits (249), Expect = 2e-19
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRDPDDPLKTTDQTR+LGLI+CRGTAVMLVSPTDGT+EI NPFIQPDGA
Sbjct: 50 FLRDPDDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 99
>ref|XP_004516147.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Cicer
arietinum]
Length = 99
Score = 99.8 bits (247), Expect = 3e-19
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRDPDDPLKTTDQTR LGLI+CRGTAVMLVSPTDGT+EI NPFIQPDGA
Sbjct: 50 FLRDPDDPLKTTDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 99
>emb|CBI24863.3| unnamed protein product [Vitis vinifera]
Length = 107
Score = 99.8 bits (247), Expect = 3e-19
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRDPDDP KTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPFIQPDGA
Sbjct: 58 FLRDPDDPQKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 107
>ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
[Vitis vinifera] gi|359487265|ref|XP_003633552.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
isoform 2 [Vitis vinifera]
gi|359487267|ref|XP_003633553.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm7-like isoform 3
[Vitis vinifera] gi|359487269|ref|XP_003633554.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
isoform 4 [Vitis vinifera]
Length = 99
Score = 99.8 bits (247), Expect = 3e-19
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRDPDDP KTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPFIQPDGA
Sbjct: 50 FLRDPDDPQKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 99
>ref|XP_006850146.1| hypothetical protein AMTR_s00022p00235920 [Amborella trichopoda]
gi|548853744|gb|ERN11727.1| hypothetical protein
AMTR_s00022p00235920 [Amborella trichopoda]
Length = 147
Score = 99.4 bits (246), Expect = 4e-19
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRDPDDPLKTTDQTR LGLI+CRGTAVMLVSPTDGT+EI NPF+QPDGA
Sbjct: 98 FLRDPDDPLKTTDQTRPLGLIVCRGTAVMLVSPTDGTDEISNPFVQPDGA 147
>gb|EPS60933.1| hypothetical protein M569_13864, partial [Genlisea aurea]
Length = 98
Score = 99.0 bits (245), Expect = 6e-19
Identities = 44/50 (88%), Positives = 49/50 (98%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
+LRDP+DPLKTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPF+QPDGA
Sbjct: 49 YLRDPEDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 98
>ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
max]
Length = 99
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRDPDDPLKTTDQTR LGLI+CRGTAVMLVSPTDGT+EI NPFIQPDG+
Sbjct: 50 FLRDPDDPLKTTDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGS 99
>ref|XP_003623155.1| U6 snRNA-associated Sm-like protein LSm7 [Medicago truncatula]
gi|355498170|gb|AES79373.1| U6 snRNA-associated Sm-like
protein LSm7 [Medicago truncatula]
Length = 130
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRDPDDPLKTTDQTR LGLI+CRGTAVMLVSPTDGT+EI NPF+QPDGA
Sbjct: 81 FLRDPDDPLKTTDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 130
>gb|AFK41594.1| unknown [Medicago truncatula]
Length = 99
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRDPDDPLKTTDQTR LGLI+CRGTAVMLVSPTDGT+EI NPF+QPDGA
Sbjct: 50 FLRDPDDPLKTTDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 99
>ref|XP_002299952.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|224104033|ref|XP_002313290.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
gi|566151331|ref|XP_006369638.1| hypothetical protein
POPTR_0001s27630g [Populus trichocarpa]
gi|118483640|gb|ABK93714.1| unknown [Populus
trichocarpa] gi|222847210|gb|EEE84757.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
gi|222849698|gb|EEE87245.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
gi|550348327|gb|ERP66207.1| hypothetical protein
POPTR_0001s27630g [Populus trichocarpa]
Length = 99
Score = 98.6 bits (244), Expect = 8e-19
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRD DDPLKTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPF+QPDGA
Sbjct: 50 FLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 99
>gb|AFK37807.1| unknown [Lotus japonicus]
Length = 99
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRDPDDPLKTT QTR LGLI+CRGTAVMLVSPTDGT+EI+NPFIQPDGA
Sbjct: 50 FLRDPDDPLKTTAQTRSLGLIVCRGTAVMLVSPTDGTDEIENPFIQPDGA 99
>ref|NP_001235908.1| uncharacterized protein LOC100306498 [Glycine max]
gi|255628715|gb|ACU14702.1| unknown [Glycine max]
Length = 99
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRDPDDPLKTTDQTR LGLI+CRGTAVMLVSPTDGT+EI NPF+QPDG+
Sbjct: 50 FLRDPDDPLKTTDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGS 99
>ref|XP_002513176.1| conserved hypothetical protein [Ricinus communis]
gi|223547674|gb|EEF49167.1| conserved hypothetical
protein [Ricinus communis]
Length = 99
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
+LRDPDDPLKTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPFIQ DGA
Sbjct: 50 YLRDPDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQQDGA 99
>ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
[Cucumis sativus] gi|449463765|ref|XP_004149602.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
isoform 2 [Cucumis sativus]
gi|449530742|ref|XP_004172352.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm7-like isoform 1
[Cucumis sativus] gi|449530744|ref|XP_004172353.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
isoform 2 [Cucumis sativus]
Length = 99
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/50 (90%), Positives = 47/50 (94%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRDPDDPLKTTDQTR LGLI+CRGTAVMLVSP DGT+EI NPFIQPDGA
Sbjct: 50 FLRDPDDPLKTTDQTRPLGLIVCRGTAVMLVSPVDGTDEIANPFIQPDGA 99
>gb|EMJ19843.1| hypothetical protein PRUPE_ppa013852mg [Prunus persica]
Length = 99
Score = 96.7 bits (239), Expect = 3e-18
Identities = 45/50 (90%), Positives = 47/50 (94%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRD DDPLKTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPF QPDGA
Sbjct: 50 FLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFSQPDGA 99
>ref|XP_006482902.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Citrus
sinensis]
Length = 99
Score = 96.3 bits (238), Expect = 4e-18
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRD DDPLKTTDQTR+LGLI+CRGTAVMLVSPTDGT+EI NPF+QPDGA
Sbjct: 50 FLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 99
>ref|XP_006438984.1| hypothetical protein CICLE_v10033061mg [Citrus clementina]
gi|557541180|gb|ESR52224.1| hypothetical protein
CICLE_v10033061mg [Citrus clementina]
Length = 131
Score = 96.3 bits (238), Expect = 4e-18
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
FLRD DDPLKTTDQTR+LGLI+CRGTAVMLVSPTDGT+EI NPF+QPDGA
Sbjct: 82 FLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
>ref|XP_004306521.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm7-like
[Fragaria vesca subsp. vesca]
Length = 99
Score = 95.9 bits (237), Expect = 5e-18
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA 181
F+RD DDPLKTTDQTRRLGLI+CRGTAVMLVSPTDGT+EI NPF QPDGA
Sbjct: 50 FIRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFSQPDGA 99
>ref|XP_006292107.1| hypothetical protein CARUB_v10018303mg [Capsella rubella]
gi|482560814|gb|EOA25005.1| hypothetical protein
CARUB_v10018303mg [Capsella rubella]
Length = 99
Score = 94.0 bits (232), Expect = 2e-17
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = -1
Query: 330 FLRDPDDPLKTTDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPD 187
FLRD DDPLKTTDQTRRLGLI+CRGTAVMLVSPTDGTEEI NPF+QP+
Sbjct: 50 FLRDHDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFVQPE 97