BLASTX nr result
ID: Zingiber23_contig00018841
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00018841
(574 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006438984.1| hypothetical protein CICLE_v10033061mg [Citr... 83 6e-14
ref|XP_004246531.1| PREDICTED: probable U6 snRNA-associated Sm-l... 82 1e-13
ref|XP_004246530.1| PREDICTED: probable U6 snRNA-associated Sm-l... 82 1e-13
ref|XP_004246529.1| PREDICTED: probable U6 snRNA-associated Sm-l... 82 1e-13
gb|ADE77898.1| unknown [Picea sitchensis] 81 2e-13
gb|ADE77140.1| unknown [Picea sitchensis] 81 2e-13
ref|XP_006659178.1| PREDICTED: U6 snRNA-associated Sm-like prote... 81 2e-13
ref|XP_006482902.1| PREDICTED: U6 snRNA-associated Sm-like prote... 81 2e-13
gb|ESW30655.1| hypothetical protein PHAVU_002G171900g [Phaseolus... 81 2e-13
ref|XP_006395667.1| hypothetical protein EUTSA_v10005187mg [Eutr... 81 2e-13
gb|EOX96719.1| Small nuclear ribonucleoprotein family protein [T... 81 2e-13
ref|XP_006292107.1| hypothetical protein CARUB_v10018303mg [Caps... 81 2e-13
ref|XP_004306521.1| PREDICTED: probable U6 snRNA-associated Sm-l... 81 2e-13
gb|EMJ19844.1| hypothetical protein PRUPE_ppa013852mg [Prunus pe... 81 2e-13
gb|EMJ19843.1| hypothetical protein PRUPE_ppa013852mg [Prunus pe... 81 2e-13
gb|EMJ19842.1| hypothetical protein PRUPE_ppa013852mg [Prunus pe... 81 2e-13
ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like prote... 81 2e-13
ref|NP_178480.1| U6 snRNA-associated Sm-like protein LSm7 [Arab... 81 2e-13
ref|NP_001061124.1| Os08g0177700 [Oryza sativa Japonica Group] g... 81 2e-13
gb|AFK37807.1| unknown [Lotus japonicus] 81 2e-13
>ref|XP_006438984.1| hypothetical protein CICLE_v10033061mg [Citrus clementina]
gi|557541180|gb|ESR52224.1| hypothetical protein
CICLE_v10033061mg [Citrus clementina]
Length = 131
Score = 82.8 bits (203), Expect = 6e-14
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = +2
Query: 449 KMSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
KMSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 73
>ref|XP_004246531.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm7-like
isoform 3 [Solanum lycopersicum]
Length = 96
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV+GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVVGTLKGYDQLLN 41
>ref|XP_004246530.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm7-like
isoform 2 [Solanum lycopersicum]
gi|565348245|ref|XP_006341127.1| PREDICTED: probable U6
snRNA-associated Sm-like protein LSm7-like [Solanum
tuberosum]
Length = 99
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV+GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVVGTLKGYDQLLN 41
>ref|XP_004246529.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm7-like
isoform 1 [Solanum lycopersicum]
Length = 123
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV+GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVVGTLKGYDQLLN 41
>gb|ADE77898.1| unknown [Picea sitchensis]
Length = 80
Score = 81.3 bits (199), Expect = 2e-13
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKFIDKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFIDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>gb|ADE77140.1| unknown [Picea sitchensis]
Length = 98
Score = 81.3 bits (199), Expect = 2e-13
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKFIDKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFIDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>ref|XP_006659178.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Oryza
brachyantha]
Length = 98
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>ref|XP_006482902.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Citrus
sinensis]
Length = 99
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>gb|ESW30655.1| hypothetical protein PHAVU_002G171900g [Phaseolus vulgaris]
Length = 99
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>ref|XP_006395667.1| hypothetical protein EUTSA_v10005187mg [Eutrema salsugineum]
gi|557092306|gb|ESQ32953.1| hypothetical protein
EUTSA_v10005187mg [Eutrema salsugineum]
Length = 99
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>gb|EOX96719.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
Length = 99
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>ref|XP_006292107.1| hypothetical protein CARUB_v10018303mg [Capsella rubella]
gi|482560814|gb|EOA25005.1| hypothetical protein
CARUB_v10018303mg [Capsella rubella]
Length = 99
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>ref|XP_004306521.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm7-like
[Fragaria vesca subsp. vesca]
Length = 99
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>gb|EMJ19844.1| hypothetical protein PRUPE_ppa013852mg [Prunus persica]
Length = 78
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>gb|EMJ19843.1| hypothetical protein PRUPE_ppa013852mg [Prunus persica]
Length = 99
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>gb|EMJ19842.1| hypothetical protein PRUPE_ppa013852mg [Prunus persica]
Length = 72
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
[Cucumis sativus] gi|449463765|ref|XP_004149602.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
isoform 2 [Cucumis sativus]
gi|449530742|ref|XP_004172352.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm7-like isoform 1
[Cucumis sativus] gi|449530744|ref|XP_004172353.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
isoform 2 [Cucumis sativus]
Length = 99
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>ref|NP_178480.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
gi|30678085|ref|NP_849931.1| U6 snRNA-associated Sm-like
protein LSm7 [Arabidopsis thaliana]
gi|4582434|gb|AAD24820.1| putative snRNP splicing factor
[Arabidopsis thaliana] gi|27765062|gb|AAO23652.1|
At2g03870 [Arabidopsis thaliana]
gi|110742944|dbj|BAE99367.1| putative snRNP splicing
factor [Arabidopsis thaliana]
gi|330250666|gb|AEC05760.1| U6 snRNA-associated Sm-like
protein LSm7 [Arabidopsis thaliana]
gi|330250667|gb|AEC05761.1| U6 snRNA-associated Sm-like
protein LSm7 [Arabidopsis thaliana]
Length = 99
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>ref|NP_001061124.1| Os08g0177700 [Oryza sativa Japonica Group]
gi|38636805|dbj|BAD03046.1| putative snRNP splicing
factor -related [Oryza sativa Japonica Group]
gi|38636982|dbj|BAD03242.1| putative snRNP splicing
factor -related [Oryza sativa Japonica Group]
gi|113623093|dbj|BAF23038.1| Os08g0177700 [Oryza sativa
Japonica Group] gi|218200565|gb|EEC82992.1| hypothetical
protein OsI_28028 [Oryza sativa Indica Group]
Length = 98
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 41
>gb|AFK37807.1| unknown [Lotus japonicus]
Length = 99
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 452 MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLN 574
MSGRKETVLDLAKF+DKGVQVKLTGGRQV GTLKGYDQLLN
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLN 41