BLASTX nr result
ID: Zingiber23_contig00018385
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00018385
(996 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera... 366 7e-99
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera] 360 5e-97
ref|XP_006372643.1| RNA polymerase transcriptional regulation me... 360 6e-97
ref|XP_002331927.1| predicted protein [Populus trichocarpa] 355 2e-95
gb|EOY26988.1| RNA polymerase transcriptional regulation mediato... 354 3e-95
ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II tra... 352 1e-94
ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ... 350 4e-94
gb|EMJ18951.1| hypothetical protein PRUPE_ppa010369mg [Prunus pe... 350 5e-94
ref|XP_006343025.1| PREDICTED: mediator of RNA polymerase II tra... 349 8e-94
gb|EEC80233.1| hypothetical protein OsI_22170 [Oryza sativa Indi... 349 1e-93
ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ... 347 4e-93
ref|XP_003531638.1| PREDICTED: mediator of RNA polymerase II tra... 347 4e-93
gb|EXB74612.1| Putative mediator of RNA polymerase II transcript... 346 9e-93
ref|XP_004235630.1| PREDICTED: mediator of RNA polymerase II tra... 345 2e-92
ref|XP_004235629.1| PREDICTED: mediator of RNA polymerase II tra... 345 2e-92
gb|ESW07605.1| hypothetical protein PHAVU_010G143300g [Phaseolus... 345 2e-92
emb|CBI36012.3| unnamed protein product [Vitis vinifera] 340 5e-91
ref|XP_006426448.1| hypothetical protein CICLE_v10026335mg [Citr... 338 1e-90
ref|XP_004252362.1| PREDICTED: mediator of RNA polymerase II tra... 337 3e-90
ref|XP_006466167.1| PREDICTED: mediator of RNA polymerase II tra... 337 4e-90
>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
subunit 6 [Vitis vinifera]
Length = 258
Score = 366 bits (940), Expect = 7e-99
Identities = 191/263 (72%), Positives = 208/263 (79%), Gaps = 6/263 (2%)
Frame = -1
Query: 975 MAATPL-PPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVF 799
MA+TP+ PP G P GNP V P PPGTDMTGICFRDQLWLN+YPLDRNLVF
Sbjct: 1 MASTPMAPPNPAAGNPNFDGNPPAV-----PTPPGTDMTGICFRDQLWLNSYPLDRNLVF 55
Query: 798 DYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGP 619
DYFALSPFYDW+CNNEQLR RSIHPLD SHLSKMTGTEY L+EVMEPHLFVIRKQKRDGP
Sbjct: 56 DYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGP 115
Query: 618 EKITPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEE 439
EK+TPMLTYYILDGSIYQAPQL +VF +RIGRALYHISKAF TAASKLEKIGY DAENE
Sbjct: 116 EKVTPMLTYYILDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENEN 175
Query: 438 PNSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXPEGYAP---SEMEKDLEKRA 268
P ES GKE ID KE+ RVD ILA+LQRKL PEGYAP +E EK E +
Sbjct: 176 PALESKVGKETIDFKEVMRVDQILASLQRKLPPAPPPPQFPEGYAPPPTAEGEKGPETQQ 235
Query: 267 SEQP--TSVDPIIDQGPAKRTKF 205
+ +P ++DPIIDQGP+KR KF
Sbjct: 236 AAEPQLPALDPIIDQGPSKRMKF 258
>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
Length = 253
Score = 360 bits (924), Expect = 5e-97
Identities = 186/256 (72%), Positives = 201/256 (78%), Gaps = 5/256 (1%)
Frame = -1
Query: 957 PPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSP 778
PP G P GNP P PPGTDMTGICFRDQLWLN+YPLDRNLVFDYFALSP
Sbjct: 3 PPNPAAGNPNFDGNPPAA-----PTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSP 57
Query: 777 FYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKITPML 598
FYDW+CNNEQLR RSIHPLD SHLSKMTGTEY L+EVMEPHLFVIRKQKRDGPEK+TPML
Sbjct: 58 FYDWTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPML 117
Query: 597 TYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEPNSESIN 418
TYYILDGSIYQAPQL +VF +RIGRALYHISKAF TAASKLEKIGY DAENE P ES
Sbjct: 118 TYYILDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKV 177
Query: 417 GKEAIDLKELKRVDHILATLQRKLXXXXXXXXXPEGYAP---SEMEKDLEKRASEQP--T 253
GKE ID KE+ RVD ILA+LQRKL PEGYAP +E EK E + + +P
Sbjct: 178 GKETIDFKEVMRVDQILASLQRKLPPAPPAPQFPEGYAPPPTAEGEKGPETQQAAEPQLP 237
Query: 252 SVDPIIDQGPAKRTKF 205
++DPIIDQGP+KR KF
Sbjct: 238 ALDPIIDQGPSKRMKF 253
>ref|XP_006372643.1| RNA polymerase transcriptional regulation mediator-related family
protein [Populus trichocarpa]
gi|550319272|gb|ERP50440.1| RNA polymerase
transcriptional regulation mediator-related family
protein [Populus trichocarpa]
Length = 259
Score = 360 bits (923), Expect = 6e-97
Identities = 184/256 (71%), Positives = 200/256 (78%), Gaps = 5/256 (1%)
Frame = -1
Query: 957 PPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSP 778
PP + P NP + QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSP
Sbjct: 4 PPVLPQLPTNFEANPPPMGPTPPQQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSP 63
Query: 777 FYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKITPML 598
FYDW+CNNEQLRS+SIHPLDLSHL KMTGTEY LSEVMEPHLFV RKQKRD EK+TPML
Sbjct: 64 FYDWTCNNEQLRSQSIHPLDLSHLLKMTGTEYMLSEVMEPHLFVFRKQKRDSAEKVTPML 123
Query: 597 TYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEPNSESIN 418
TYY+LDGSIYQAPQL SVFA+R+GRALY+ISKAF TAASKLEKIGY D+ENE SES
Sbjct: 124 TYYVLDGSIYQAPQLCSVFAARVGRALYYISKAFGTAASKLEKIGYVDSENEGAASESKT 183
Query: 417 GKEAIDLKELKRVDHILATLQRKLXXXXXXXXXPEGYAP---SEMEKDLEKRASEQP--T 253
GKE ID KE+KR+DHILA+LQRKL PEGY P +E EK E + +P
Sbjct: 184 GKEVIDFKEVKRIDHILASLQRKLPPAPPPPSFPEGYVPQPTTEEEKGPETQQGGEPQLP 243
Query: 252 SVDPIIDQGPAKRTKF 205
SVDPIIDQGPAKR KF
Sbjct: 244 SVDPIIDQGPAKRMKF 259
>ref|XP_002331927.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 355 bits (910), Expect = 2e-95
Identities = 179/232 (77%), Positives = 193/232 (83%), Gaps = 5/232 (2%)
Frame = -1
Query: 885 QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLRSRSIHPLDLSHL 706
QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDW+CNNEQLRS+SIHPLDLSHL
Sbjct: 4 QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDLSHL 63
Query: 705 SKMTGTEYALSEVMEPHLFVIRKQKRDGPEKITPMLTYYILDGSIYQAPQLASVFASRIG 526
KMTGTEY LSEVMEPHLFV RKQKRD EK+TPMLTYY+LDGSIYQAPQL SVFA+R+G
Sbjct: 64 LKMTGTEYMLSEVMEPHLFVFRKQKRDSAEKVTPMLTYYVLDGSIYQAPQLCSVFAARVG 123
Query: 525 RALYHISKAFNTAASKLEKIGYADAENEEPNSESINGKEAIDLKELKRVDHILATLQRKL 346
RALY+ISKAF TAASKLEKIGY D+ENE SES GKE ID KE+KR+DHILA+LQRKL
Sbjct: 124 RALYYISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHILASLQRKL 183
Query: 345 XXXXXXXXXPEGYAP---SEMEKDLEKRASEQP--TSVDPIIDQGPAKRTKF 205
PEGY P +E EK E + +P SVDPIIDQGPAKR KF
Sbjct: 184 PPAPPPPSFPEGYVPQPTTEEEKGPETQQGGEPQLPSVDPIIDQGPAKRMKF 235
>gb|EOY26988.1| RNA polymerase transcriptional regulation mediator-related isoform
1 [Theobroma cacao]
Length = 257
Score = 354 bits (909), Expect = 3e-95
Identities = 180/250 (72%), Positives = 197/250 (78%), Gaps = 6/250 (2%)
Frame = -1
Query: 936 PPQEVGNPGVVASDGMP-QPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSC 760
PPQ A +P QPPGTDMTGICFRDQLWLNTYPLDRNL+FDYFALSPFYDW+C
Sbjct: 8 PPQAAAAGNFEAPPPLPMQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTC 67
Query: 759 NNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKITPMLTYYILD 580
NNEQLR SIHPLD+S LSKMTG EY LSEVMEP+LFVIRKQKRDGPEK+TPML YYILD
Sbjct: 68 NNEQLRMHSIHPLDISQLSKMTGVEYMLSEVMEPNLFVIRKQKRDGPEKVTPMLAYYILD 127
Query: 579 GSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEPNSESINGKEAID 400
GSIYQAPQL +VFA+R+GRALY+ISKAF TAASKLEKIGY D ENE ES GKE ID
Sbjct: 128 GSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETFESKGGKETID 187
Query: 399 LKELKRVDHILATLQRKLXXXXXXXXXPEGYAP---SEMEKDLEKR--ASEQPTSVDPII 235
KE+KRVDHILA+LQRKL PEG+ P +E EKD E + QP ++DPII
Sbjct: 188 FKEVKRVDHILASLQRKLPPAPPPPPFPEGFIPLATAEAEKDPENQQAVETQPPAIDPII 247
Query: 234 DQGPAKRTKF 205
DQGPAKR KF
Sbjct: 248 DQGPAKRMKF 257
>ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform X2 [Glycine max]
Length = 249
Score = 352 bits (904), Expect = 1e-94
Identities = 176/244 (72%), Positives = 197/244 (80%), Gaps = 5/244 (2%)
Frame = -1
Query: 921 GNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLR 742
GN + G PQPPGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDW+CNNEQLR
Sbjct: 6 GNQMLEGGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLR 65
Query: 741 SRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKITPMLTYYILDGSIYQA 562
RS+HPLD+S LSKMTGTEY LSEVMEPHLFVIRKQKRD P+K+TPML YY+LDGSIYQA
Sbjct: 66 MRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQA 125
Query: 561 PQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEPNSESINGKEAIDLKELKR 382
PQL +VFA+RIGRALY+I KAF TAASKLEKIGYAD+ENE ES KE ID+KE+KR
Sbjct: 126 PQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYADSENETALLESKTAKETIDIKEVKR 185
Query: 381 VDHILATLQRKLXXXXXXXXXPEGYAP---SEMEK--DLEKRASEQPTSVDPIIDQGPAK 217
VDHILA+LQRKL PEGY P +E EK + ++ A Q + DPIIDQGPAK
Sbjct: 186 VDHILASLQRKLPPAPPPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPIIDQGPAK 245
Query: 216 RTKF 205
R KF
Sbjct: 246 RMKF 249
>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
mediator complex subunit, putative [Ricinus communis]
Length = 251
Score = 350 bits (899), Expect = 4e-94
Identities = 182/244 (74%), Positives = 196/244 (80%), Gaps = 5/244 (2%)
Frame = -1
Query: 921 GNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLR 742
GNP A PQPPGTDMTGICFRDQLWLNTYPLDRNL+FDYFALSPFYDW+CNNEQLR
Sbjct: 12 GNPLAPAP---PQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLR 68
Query: 741 SRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKITPMLTYYILDGSIYQA 562
+SIHPLDLSHLSKMTGTEY L+EV+EP+LFVIRKQKRD PEK+TPMLTYY+LDGSIYQA
Sbjct: 69 LQSIHPLDLSHLSKMTGTEYMLNEVIEPNLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQA 128
Query: 561 PQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEPNSESINGKEAIDLKELKR 382
PQL +VFA+RIGRALYHISKAF TAASKLEKIGY D E E SES GKE ID KE+KR
Sbjct: 129 PQLCNVFAARIGRALYHISKAFTTAASKLEKIGYVD-EGEGVASESKVGKEVIDFKEVKR 187
Query: 381 VDHILATLQRKLXXXXXXXXXPEGYAPS---EMEKDLEKR--ASEQPTSVDPIIDQGPAK 217
+DHILA++QRKL PEGY P E EK E R QP VDPIIDQGPAK
Sbjct: 188 IDHILASIQRKLPPAPPPPPFPEGYVPPATVEAEKGSETRQAVETQPPPVDPIIDQGPAK 247
Query: 216 RTKF 205
R KF
Sbjct: 248 RMKF 251
>gb|EMJ18951.1| hypothetical protein PRUPE_ppa010369mg [Prunus persica]
Length = 252
Score = 350 bits (898), Expect = 5e-94
Identities = 180/263 (68%), Positives = 203/263 (77%), Gaps = 6/263 (2%)
Frame = -1
Query: 975 MAATPL-PPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVF 799
MA P+ PP+M+G PP P V QPPGTDMTGICF+DQLWLN+YPLDRNLVF
Sbjct: 1 MATPPMAPPSMEGTPP-----PMAV------QPPGTDMTGICFKDQLWLNSYPLDRNLVF 49
Query: 798 DYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGP 619
DYFA+SPFYDW+CNNEQLR RSIHPLD SHLSKMTGTEY+L+EVMEPHLFV RKQKRDGP
Sbjct: 50 DYFAISPFYDWTCNNEQLRQRSIHPLDPSHLSKMTGTEYSLNEVMEPHLFVFRKQKRDGP 109
Query: 618 EKITPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEE 439
EK+TPMLTYY+LDG+IYQAPQL +VFA+RIGRALY+ISKAF TAASKLEKIGY D+ENE
Sbjct: 110 EKVTPMLTYYVLDGTIYQAPQLCNVFAARIGRALYYISKAFTTAASKLEKIGYVDSENET 169
Query: 438 PNSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXPEGYAP-----SEMEKDLEK 274
ES KE ID KE+KRVDHIL +LQRKL PEGY P +E + ++
Sbjct: 170 AAFESKVTKETIDFKEVKRVDHILQSLQRKLPPAPPPPPFPEGYVPAPTAEAENGPETQQ 229
Query: 273 RASEQPTSVDPIIDQGPAKRTKF 205
Q +DPIIDQGPAKR KF
Sbjct: 230 AGEPQQPQMDPIIDQGPAKRMKF 252
>ref|XP_006343025.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like [Solanum tuberosum]
Length = 247
Score = 349 bits (896), Expect = 8e-94
Identities = 178/258 (68%), Positives = 199/258 (77%), Gaps = 2/258 (0%)
Frame = -1
Query: 975 MAATPL-PPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVF 799
MA+TP+ PP G P P PGTDMT ICFRDQLWLNTYPLDRNLVF
Sbjct: 1 MASTPMMPPNADGSAP------------AAPPLPGTDMTSICFRDQLWLNTYPLDRNLVF 48
Query: 798 DYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGP 619
DYFALSPFYDW+CNNEQLR+R+IHPLD SH+SKMTG EY LSEVMEP+LFVIRKQKRD P
Sbjct: 49 DYFALSPFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKRDSP 108
Query: 618 EKITPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEE 439
EK+TPMLTYYILDGSIYQAPQL +VFA+R+GRALYHISKAF TA+SKLEKIGY ++EN+
Sbjct: 109 EKVTPMLTYYILDGSIYQAPQLCNVFAARLGRALYHISKAFGTASSKLEKIGYVESENDS 168
Query: 438 PNSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXPEGYAPSEMEKDLEKRASE- 262
SE+ KEAID KELKRVDHILA+LQRKL PEGYAP + E + E
Sbjct: 169 QASETKPAKEAIDFKELKRVDHILASLQRKLPPVPPPPPFPEGYAPPSTSEPSENQQPET 228
Query: 261 QPTSVDPIIDQGPAKRTK 208
QP +DPIIDQGP+KR K
Sbjct: 229 QPPPIDPIIDQGPSKRMK 246
>gb|EEC80233.1| hypothetical protein OsI_22170 [Oryza sativa Indica Group]
Length = 258
Score = 349 bits (895), Expect = 1e-93
Identities = 180/262 (68%), Positives = 198/262 (75%), Gaps = 5/262 (1%)
Frame = -1
Query: 975 MAATPLPPAMQGGPPQEVGNPGVVASDG---MPQPPGTDMTGICFRDQLWLNTYPLDRNL 805
M+ TPLPP Q PP PG DG +P PPGTDMTGICFRDQLWLNTYPLDRNL
Sbjct: 1 MSGTPLPPPAQPPPP-----PGAAGPDGAAALPPPPGTDMTGICFRDQLWLNTYPLDRNL 55
Query: 804 VFDYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRD 625
VFDYFALSPFYD +CNNE LRSR IHPLD+SHL+KMTG EY LS+VMEPHLFVIRKQ+R+
Sbjct: 56 VFDYFALSPFYDLTCNNESLRSRQIHPLDMSHLTKMTGMEYVLSDVMEPHLFVIRKQRRE 115
Query: 624 GPEKITPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAEN 445
PEK ML YYILDGSIYQAPQL SVFASRI RA++HISKAF TA SKLEKIG+ + E
Sbjct: 116 SPEKSNAMLAYYILDGSIYQAPQLCSVFASRISRAMHHISKAFTTACSKLEKIGHVETEP 175
Query: 444 EEPNSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXPEGYAPSEMEKDLEKRAS 265
+ SES KEAIDLKELKRVDHIL +LQRKL PEGY PSE EK + +
Sbjct: 176 DTAASESKTQKEAIDLKELKRVDHILMSLQRKLQPAPPPPPFPEGYVPSEQEKASDDLLA 235
Query: 264 EQ--PTSVDPIIDQGPAKRTKF 205
+ P VDPIIDQGPAKR +F
Sbjct: 236 SEALPPQVDPIIDQGPAKRPRF 257
>ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 6-like [Cucumis sativus]
Length = 260
Score = 347 bits (890), Expect = 4e-93
Identities = 186/262 (70%), Positives = 200/262 (76%), Gaps = 7/262 (2%)
Frame = -1
Query: 969 ATPLPPAMQGGPPQEVGNPGVVASDGMPQPPGTDMT---GICFRDQLWLNTYPLDRNLVF 799
ATP PP G G P A PQPPGTDMT GICFRDQLWLNTYPLDRNLVF
Sbjct: 2 ATPPPPTAPPGTGNFEGGPLPAA----PQPPGTDMTNLPGICFRDQLWLNTYPLDRNLVF 57
Query: 798 DYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGP 619
DYFALSPFYDW+CNNEQLR RSIHPLDLS LSKMTG EY L+EVMEPHLFV RKQKRDGP
Sbjct: 58 DYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGP 117
Query: 618 EKITPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEE 439
EK+TPMLTYYILDGSIYQAPQL SVFA+R+ RALY+ISKAF TA+SKLEKIGY D+ENE
Sbjct: 118 EKVTPMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENE- 176
Query: 438 PNSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXPEGYAP---SEMEKDLEKRA 268
+ E KE I+ KE+KRVDHILA+LQRKL PEGYAP +E EK E +
Sbjct: 177 -SEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPENQQ 235
Query: 267 SE-QPTSVDPIIDQGPAKRTKF 205
E Q S DPIIDQGPAKR KF
Sbjct: 236 GESQQPSADPIIDQGPAKRMKF 257
>ref|XP_003531638.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform X1 [Glycine max]
Length = 252
Score = 347 bits (890), Expect = 4e-93
Identities = 176/247 (71%), Positives = 197/247 (79%), Gaps = 8/247 (3%)
Frame = -1
Query: 921 GNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLR 742
GN + G PQPPGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDW+CNNEQLR
Sbjct: 6 GNQMLEGGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLR 65
Query: 741 SRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKITPMLTYYILDGSIYQA 562
RS+HPLD+S LSKMTGTEY LSEVMEPHLFVIRKQKRD P+K+TPML YY+LDGSIYQA
Sbjct: 66 MRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQA 125
Query: 561 PQLASVFASRIGRALYHISKAFNTAASKLEKIGY---ADAENEEPNSESINGKEAIDLKE 391
PQL +VFA+RIGRALY+I KAF TAASKLEKIGY AD+ENE ES KE ID+KE
Sbjct: 126 PQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYAGSADSENETALLESKTAKETIDIKE 185
Query: 390 LKRVDHILATLQRKLXXXXXXXXXPEGYAP---SEMEK--DLEKRASEQPTSVDPIIDQG 226
+KRVDHILA+LQRKL PEGY P +E EK + ++ A Q + DPIIDQG
Sbjct: 186 VKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPIIDQG 245
Query: 225 PAKRTKF 205
PAKR KF
Sbjct: 246 PAKRMKF 252
>gb|EXB74612.1| Putative mediator of RNA polymerase II transcription subunit 6
[Morus notabilis]
Length = 251
Score = 346 bits (887), Expect = 9e-93
Identities = 175/263 (66%), Positives = 199/263 (75%), Gaps = 6/263 (2%)
Frame = -1
Query: 975 MAATPL-PPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVF 799
MA P+ P M+G PP P PPGTDMTGICFRDQLWLN++PLDRNLVF
Sbjct: 1 MATPPVGAPGMEGRPPAP------------PPPPGTDMTGICFRDQLWLNSFPLDRNLVF 48
Query: 798 DYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGP 619
DYFALSPFYDW+CNNEQLR RSIHPLDL+HLSKMTGTEY L+EV+EP+LFVIRKQKRDGP
Sbjct: 49 DYFALSPFYDWTCNNEQLRMRSIHPLDLTHLSKMTGTEYMLNEVLEPNLFVIRKQKRDGP 108
Query: 618 EKITPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEE 439
EK+TPMLTYY+LDGSIYQAPQL +VFA+R GRALY++ KAF AASKLEKIGY D+ENE
Sbjct: 109 EKVTPMLTYYVLDGSIYQAPQLCNVFAARAGRALYYLQKAFTNAASKLEKIGYVDSENEN 168
Query: 438 PNSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXPEGYAP-----SEMEKDLEK 274
+S GKE ID KE+KR+DHILA+LQRKL PEGY P SE + ++
Sbjct: 169 APLDSKIGKETIDFKEMKRIDHILASLQRKLPPAPPPPPFPEGYVPPQNADSEKGPEAQQ 228
Query: 273 RASEQPTSVDPIIDQGPAKRTKF 205
Q VDPIIDQGPAKR +F
Sbjct: 229 AGEAQQAPVDPIIDQGPAKRMRF 251
>ref|XP_004235630.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform 2 [Solanum lycopersicum]
Length = 247
Score = 345 bits (885), Expect = 2e-92
Identities = 175/257 (68%), Positives = 198/257 (77%), Gaps = 1/257 (0%)
Frame = -1
Query: 975 MAATPLPPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFD 796
MA+TP+ P G ++ P PGTDMT ICFRDQLWLNTYPLD+NLVFD
Sbjct: 1 MASTPMMPLNADG-----------SAPVAPPLPGTDMTSICFRDQLWLNTYPLDKNLVFD 49
Query: 795 YFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPE 616
YFALSPFYDW+CNNEQLR+R+IHPLD SH+SKMTG EY LSEVMEP+LFVIRKQKRD PE
Sbjct: 50 YFALSPFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKRDSPE 109
Query: 615 KITPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEP 436
K+TPMLTYYILDGSIYQAPQL +VFA+R+GRALYHISKAF TA+SKLEKIGY ++EN
Sbjct: 110 KVTPMLTYYILDGSIYQAPQLCNVFAARLGRALYHISKAFGTASSKLEKIGYVESENNSQ 169
Query: 435 NSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXPEGYAPSEMEKDLEKRASE-Q 259
SE+ KEAID KELKRVDHILA+LQRKL PEGYAP + E + E Q
Sbjct: 170 ASETKPAKEAIDFKELKRVDHILASLQRKLPAVPLPPPLPEGYAPPSTSEPSENQQPETQ 229
Query: 258 PTSVDPIIDQGPAKRTK 208
P +DPIIDQGP+KR K
Sbjct: 230 PPPIDPIIDQGPSKRMK 246
>ref|XP_004235629.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform 1 [Solanum lycopersicum]
Length = 248
Score = 345 bits (885), Expect = 2e-92
Identities = 175/257 (68%), Positives = 198/257 (77%), Gaps = 1/257 (0%)
Frame = -1
Query: 975 MAATPLPPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFD 796
MA+TP+ P G ++ P PGTDMT ICFRDQLWLNTYPLD+NLVFD
Sbjct: 1 MASTPMMPLNADG-----------SAPVAPPLPGTDMTSICFRDQLWLNTYPLDKNLVFD 49
Query: 795 YFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPE 616
YFALSPFYDW+CNNEQLR+R+IHPLD SH+SKMTG EY LSEVMEP+LFVIRKQKRD PE
Sbjct: 50 YFALSPFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKRDSPE 109
Query: 615 KITPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEP 436
K+TPMLTYYILDGSIYQAPQL +VFA+R+GRALYHISKAF TA+SKLEKIGY ++EN
Sbjct: 110 KVTPMLTYYILDGSIYQAPQLCNVFAARLGRALYHISKAFGTASSKLEKIGYVESENNSQ 169
Query: 435 NSESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXPEGYAPSEMEKDLEKRASE-Q 259
SE+ KEAID KELKRVDHILA+LQRKL PEGYAP + E + E Q
Sbjct: 170 ASETKPAKEAIDFKELKRVDHILASLQRKLPAVPLPPPLPEGYAPPSTSEPSENQQPETQ 229
Query: 258 PTSVDPIIDQGPAKRTK 208
P +DPIIDQGP+KR K
Sbjct: 230 PPPIDPIIDQGPSKRMK 246
>gb|ESW07605.1| hypothetical protein PHAVU_010G143300g [Phaseolus vulgaris]
Length = 247
Score = 345 bits (884), Expect = 2e-92
Identities = 175/243 (72%), Positives = 195/243 (80%), Gaps = 6/243 (2%)
Frame = -1
Query: 915 PGVVASDGMPQP-PGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLRS 739
PG +G P P PGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDW+CNNEQLR
Sbjct: 5 PGNQMMEGGPPPLPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRM 64
Query: 738 RSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKITPMLTYYILDGSIYQAP 559
RS+HPLDLS LSKMTGTEY LSEVMEPHLFVIRKQKRD P+K+TPML YY+LDGSIYQAP
Sbjct: 65 RSVHPLDLSQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAP 124
Query: 558 QLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEPNSESINGKEAIDLKELKRV 379
QL +VFA+RIGRALY+I KAF TAASKLEKIGY D+ENE ES KE ID+KE+KRV
Sbjct: 125 QLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALVESKTAKETIDIKEVKRV 184
Query: 378 DHILATLQRKLXXXXXXXXXPEGYAP---SEMEK--DLEKRASEQPTSVDPIIDQGPAKR 214
DHILA+LQRKL PEGY P +E EK + ++ A Q + DPIIDQGPAKR
Sbjct: 185 DHILASLQRKLPPAPPPPPFPEGYVPPPTAEAEKGTETQEAAETQAPTADPIIDQGPAKR 244
Query: 213 TKF 205
KF
Sbjct: 245 MKF 247
>emb|CBI36012.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 340 bits (872), Expect = 5e-91
Identities = 173/226 (76%), Positives = 188/226 (83%), Gaps = 5/226 (2%)
Frame = -1
Query: 867 MTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGT 688
MTGICFRDQLWLN+YPLDRNLVFDYFALSPFYDW+CNNEQLR RSIHPLD SHLSKMTGT
Sbjct: 1 MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGT 60
Query: 687 EYALSEVMEPHLFVIRKQKRDGPEKITPMLTYYILDGSIYQAPQLASVFASRIGRALYHI 508
EY L+EVMEPHLFVIRKQKRDGPEK+TPMLTYYILDGSIYQAPQL +VF +RIGRALYHI
Sbjct: 61 EYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFTARIGRALYHI 120
Query: 507 SKAFNTAASKLEKIGYADAENEEPNSESINGKEAIDLKELKRVDHILATLQRKLXXXXXX 328
SKAF TAASKLEKIGY DAENE P ES GKE ID KE+ RVD ILA+LQRKL
Sbjct: 121 SKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPPP 180
Query: 327 XXXPEGYAP---SEMEKDLEKRASEQP--TSVDPIIDQGPAKRTKF 205
PEGYAP +E EK E + + +P ++DPIIDQGP+KR KF
Sbjct: 181 PQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 226
>ref|XP_006426448.1| hypothetical protein CICLE_v10026335mg [Citrus clementina]
gi|557528438|gb|ESR39688.1| hypothetical protein
CICLE_v10026335mg [Citrus clementina]
Length = 251
Score = 338 bits (868), Expect = 1e-90
Identities = 180/261 (68%), Positives = 199/261 (76%), Gaps = 7/261 (2%)
Frame = -1
Query: 969 ATPLPPA-MQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDY 793
ATP P A ++G PP P PPGTDMTGICFRDQLWLNTYPLDRN++FDY
Sbjct: 2 ATPPPGANLEGAPP------------AAPPPPGTDMTGICFRDQLWLNTYPLDRNMIFDY 49
Query: 792 FALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEK 613
F LS FYD +CNNEQLR RSIHPLD+S LSKMTG EY LSEVMEPHLFVIRKQKRDGPEK
Sbjct: 50 FTLSLFYDRTCNNEQLRMRSIHPLDISQLSKMTGIEYMLSEVMEPHLFVIRKQKRDGPEK 109
Query: 612 ITPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEPN 433
+TPMLTYY+LDGSIYQAPQL +VF++RIGRAL++I KAF TAASKLEKIGY DAEN+
Sbjct: 110 VTPMLTYYVLDGSIYQAPQLCNVFSARIGRALHYIQKAFTTAASKLEKIGYVDAENDGGT 169
Query: 432 S-ESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXPEGYAP---SEMEKDLE--KR 271
S GKE IDLKE+KRVD ILA+LQRKL PEGYAP E EKD E +
Sbjct: 170 PLHSKAGKETIDLKEVKRVDQILASLQRKLPPAPPPPPFPEGYAPPQTEEAEKDPETQQT 229
Query: 270 ASEQPTSVDPIIDQGPAKRTK 208
A QP ++DPIIDQGPAKR K
Sbjct: 230 AEPQPPAIDPIIDQGPAKRVK 250
>ref|XP_004252362.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform 1 [Solanum lycopersicum]
Length = 251
Score = 337 bits (865), Expect = 3e-90
Identities = 170/229 (74%), Positives = 184/229 (80%), Gaps = 1/229 (0%)
Frame = -1
Query: 891 MPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLRSRSIHPLDLS 712
+P PGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDW+CNNEQLRSRSIHPLD S
Sbjct: 22 LPPQPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSRSIHPLDTS 81
Query: 711 HLSKMTGTEYALSEVMEPHLFVIRKQKRDGPEKITPMLTYYILDGSIYQAPQLASVFASR 532
HLSKMTG+EY LSEVMEP+LFVIRKQKRDGPEK+TPMLTYYILDGSIYQAPQL +VFA R
Sbjct: 82 HLSKMTGSEYMLSEVMEPNLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAGR 141
Query: 531 IGRALYHISKAFNTAASKLEKIGYADAENEEPNSESINGKEAIDLKELKRVDHILATLQR 352
+GRALYHISKAF+ A+SKLEK GY +ENE SE KE ID KELKRVDHI A+LQR
Sbjct: 142 LGRALYHISKAFSFASSKLEKTGYVASENESAASEPKAAKETIDFKELKRVDHIFASLQR 201
Query: 351 KLXXXXXXXXXPEGYA-PSEMEKDLEKRASEQPTSVDPIIDQGPAKRTK 208
L PEGY PS E ++ Q VDPIIDQGP+KR K
Sbjct: 202 TLPPVPPPPPFPEGYVPPSTAEASENEQEETQLPPVDPIIDQGPSKRMK 250
>ref|XP_006466167.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like [Citrus sinensis]
Length = 251
Score = 337 bits (864), Expect = 4e-90
Identities = 178/262 (67%), Positives = 197/262 (75%), Gaps = 6/262 (2%)
Frame = -1
Query: 975 MAATPLPPAMQGGPPQEVGNPGVVASDGMPQPPGTDMTGICFRDQLWLNTYPLDRNLVFD 796
MA P ++G PP P PPGTDMTGICFRDQLWLNTYPLDRN++FD
Sbjct: 1 MATPPPGTNLEGAPP------------AAPPPPGTDMTGICFRDQLWLNTYPLDRNMIFD 48
Query: 795 YFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTGTEYALSEVMEPHLFVIRKQKRDGPE 616
YF LS FYD +CNNEQLR RSIHPLD+S LSKMTG EY LSEVMEPHLFVIRKQKRDGPE
Sbjct: 49 YFTLSLFYDRTCNNEQLRMRSIHPLDISQLSKMTGIEYMLSEVMEPHLFVIRKQKRDGPE 108
Query: 615 KITPMLTYYILDGSIYQAPQLASVFASRIGRALYHISKAFNTAASKLEKIGYADAENEEP 436
K+TPMLTYY+LDGSIYQAPQL +VF++RIGRAL++I KAF TAASKLEKIGY DAEN+
Sbjct: 109 KVTPMLTYYVLDGSIYQAPQLCNVFSARIGRALHYIQKAFTTAASKLEKIGYVDAENDGG 168
Query: 435 NS-ESINGKEAIDLKELKRVDHILATLQRKLXXXXXXXXXPEGYAP---SEMEKDLE--K 274
S GKE IDLKE+KRVD ILA+LQRKL PEGYAP E EKD E +
Sbjct: 169 TPLHSKAGKETIDLKEVKRVDQILASLQRKLPPAPPPPPFPEGYAPPQTEEAEKDPETQQ 228
Query: 273 RASEQPTSVDPIIDQGPAKRTK 208
A QP ++DPIIDQGPAKR K
Sbjct: 229 TAEPQPPAIDPIIDQGPAKRMK 250