BLASTX nr result
ID: Zingiber23_contig00018326
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00018326
(204 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein... 96 6e-18
gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryz... 96 6e-18
gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japo... 96 6e-18
ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group] g... 96 6e-18
ref|XP_004962850.1| PREDICTED: RNA polymerase-associated protein... 92 5e-17
ref|XP_003575794.1| PREDICTED: RNA polymerase-associated protein... 92 7e-17
gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indi... 92 9e-17
ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein... 91 1e-16
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein... 91 1e-16
gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus pe... 91 1e-16
ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [S... 91 1e-16
ref|NP_001168711.1| uncharacterized protein LOC100382503 [Zea ma... 91 1e-16
ref|NP_001145747.1| hypothetical protein [Zea mays] gi|219884293... 91 1e-16
ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854... 91 2e-16
gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao... 90 3e-16
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein... 90 3e-16
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop... 90 3e-16
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein... 90 4e-16
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr... 90 4e-16
gb|EMS56445.1| RNA polymerase-associated protein RTF1-like prote... 90 4e-16
>ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Oryza
brachyantha]
Length = 645
Score = 95.5 bits (236), Expect = 6e-18
Identities = 44/58 (75%), Positives = 52/58 (89%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISLA L++FGGP+G+ G +ARKQK+EAT GYK+PD+DGRRH LTLTVSDYKRRRGLL
Sbjct: 588 ISLAGLEEFGGPKGLFDGYMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 645
>gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryza sativa Japonica
Group] gi|77556035|gb|ABA98831.1| Plus-3 domain
containing protein, expressed [Oryza sativa Japonica
Group] gi|215697432|dbj|BAG91426.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 522
Score = 95.5 bits (236), Expect = 6e-18
Identities = 44/58 (75%), Positives = 52/58 (89%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISLA L++FGGP+G+ G +ARKQK+EAT GYK+PD+DGRRH LTLTVSDYKRRRGLL
Sbjct: 465 ISLAGLEEFGGPKGLFDGYMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 522
>gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japonica Group]
Length = 653
Score = 95.5 bits (236), Expect = 6e-18
Identities = 44/58 (75%), Positives = 52/58 (89%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISLA L++FGGP+G+ G +ARKQK+EAT GYK+PD+DGRRH LTLTVSDYKRRRGLL
Sbjct: 596 ISLAGLEEFGGPKGLFDGYMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 653
>ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group]
gi|113649443|dbj|BAF29955.1| Os12g0535900, partial
[Oryza sativa Japonica Group]
Length = 599
Score = 95.5 bits (236), Expect = 6e-18
Identities = 44/58 (75%), Positives = 52/58 (89%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISLA L++FGGP+G+ G +ARKQK+EAT GYK+PD+DGRRH LTLTVSDYKRRRGLL
Sbjct: 542 ISLAGLEEFGGPKGLFDGYMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 599
>ref|XP_004962850.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Setaria
italica]
Length = 650
Score = 92.4 bits (228), Expect = 5e-17
Identities = 43/58 (74%), Positives = 52/58 (89%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISL+ALQ+FGG +G+ G +ARKQK+EAT GYK+PD+DGRRH LTL+VSDYKRRRGLL
Sbjct: 593 ISLSALQEFGGAKGLFDGYMARKQKIEATMGYKVPDNDGRRHALTLSVSDYKRRRGLL 650
>ref|XP_003575794.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Brachypodium distachyon]
Length = 658
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/58 (72%), Positives = 52/58 (89%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISL+ L+++GGP+G+ G +ARKQK+EAT GYKIPD+DGRRH LTL+VSDYKRRRGLL
Sbjct: 601 ISLSVLEEYGGPKGLFEGYMARKQKIEATMGYKIPDNDGRRHALTLSVSDYKRRRGLL 658
>gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indica Group]
Length = 780
Score = 91.7 bits (226), Expect = 9e-17
Identities = 43/58 (74%), Positives = 50/58 (86%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISLA L++FGGP + G +ARKQK+EAT GYK+PD+DGRRH LTLTVSDYKRRRGLL
Sbjct: 723 ISLAGLEEFGGPMVLFDGYMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 780
>ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 619
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISLA LQKFGGPQG G +ARKQ++EAT G ++P+ DGRRH LTL+VSDYKRRRGLL
Sbjct: 562 ISLATLQKFGGPQGAQEGFMARKQRIEATVGVRVPEDDGRRHALTLSVSDYKRRRGLL 619
>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 657
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISLA LQKFGGPQG G +ARKQ++EAT G ++P+ DGRRH LTL+VSDYKRRRGLL
Sbjct: 600 ISLATLQKFGGPQGAQEGFMARKQRIEATVGVRVPEDDGRRHALTLSVSDYKRRRGLL 657
>gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
Length = 646
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISLA LQKFGGPQG G LARKQ++EAT G ++P++DGRRH LTLTVSDYKRR GLL
Sbjct: 589 ISLATLQKFGGPQGAQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 646
>ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [Sorghum bicolor]
gi|241942942|gb|EES16087.1| hypothetical protein
SORBIDRAFT_08g017010 [Sorghum bicolor]
Length = 656
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/58 (72%), Positives = 52/58 (89%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISL+ALQ+FGG +G+ G +AR+QK+EAT GYK+PD+DGRRH LTL+VSDYKRRRGLL
Sbjct: 599 ISLSALQEFGGAKGLFDGYMARRQKIEATMGYKVPDNDGRRHALTLSVSDYKRRRGLL 656
>ref|NP_001168711.1| uncharacterized protein LOC100382503 [Zea mays]
gi|223950353|gb|ACN29260.1| unknown [Zea mays]
gi|413916604|gb|AFW56536.1| plus-3 domain-containing
protein [Zea mays]
Length = 650
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/58 (72%), Positives = 52/58 (89%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISL+ALQ+FGG +G+ G +AR+QK+EAT GYK+PD+DGRRH LTL+VSDYKRRRGLL
Sbjct: 593 ISLSALQEFGGAKGLFDGYMARRQKIEATMGYKVPDNDGRRHALTLSVSDYKRRRGLL 650
>ref|NP_001145747.1| hypothetical protein [Zea mays] gi|219884293|gb|ACL52521.1| unknown
[Zea mays] gi|414878213|tpg|DAA55344.1| TPA:
hypothetical protein ZEAMMB73_654453 [Zea mays]
Length = 647
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/58 (72%), Positives = 52/58 (89%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISL+ALQ+FGG +G+ G +AR+QK+EAT GYK+PD+DGRRH LTL+VSDYKRRRGLL
Sbjct: 590 ISLSALQEFGGAKGLFDGYMARRQKIEATMGYKVPDNDGRRHALTLSVSDYKRRRGLL 647
>ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854406 [Vitis vinifera]
Length = 493
Score = 90.9 bits (224), Expect = 2e-16
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISLA LQKFGGPQG G +ARKQ++EAT G ++P++DGRRH LTLTV DYKRRRGLL
Sbjct: 436 ISLAGLQKFGGPQGALAGFMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRRGLL 493
>gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao]
gi|508781058|gb|EOY28314.1| PAF1 complex component
isoform 1 [Theobroma cacao]
Length = 660
Score = 90.1 bits (222), Expect = 3e-16
Identities = 42/58 (72%), Positives = 50/58 (86%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISL ALQ+FGGPQG G +ARKQ++EAT G ++P++DGRRH LTLTVSDYKRRRGLL
Sbjct: 603 ISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGLL 660
>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Glycine max] gi|571466984|ref|XP_006583809.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Glycine max]
Length = 656
Score = 90.1 bits (222), Expect = 3e-16
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISLA LQKFGG QG G +ARKQK+EAT G+++ ++DGRRH LTLTVSDYKRRRGLL
Sbjct: 599 ISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656
>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
gi|222848649|gb|EEE86196.1| plus-3 domain-containing
family protein [Populus trichocarpa]
Length = 662
Score = 90.1 bits (222), Expect = 3e-16
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISL ALQ+FGGPQG G +ARKQ++EAT G ++P++DGRRH LTLTV DYKRRRGLL
Sbjct: 605 ISLIALQEFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRRGLL 662
>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Citrus sinensis]
Length = 643
Score = 89.7 bits (221), Expect = 4e-16
Identities = 42/58 (72%), Positives = 50/58 (86%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISL AL+KFGGPQGV G +ARKQ++EAT G ++P++DGRRH LTLTV DYKRRRGLL
Sbjct: 586 ISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
gi|557524836|gb|ESR36142.1| hypothetical protein
CICLE_v10028000mg [Citrus clementina]
Length = 643
Score = 89.7 bits (221), Expect = 4e-16
Identities = 42/58 (72%), Positives = 50/58 (86%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISL AL+KFGGPQGV G +ARKQ++EAT G ++P++DGRRH LTLTV DYKRRRGLL
Sbjct: 586 ISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
>gb|EMS56445.1| RNA polymerase-associated protein RTF1-like protein [Triticum
urartu]
Length = 681
Score = 89.7 bits (221), Expect = 4e-16
Identities = 42/58 (72%), Positives = 50/58 (86%)
Frame = +1
Query: 1 ISLAALQKFGGPQGVHIGLLARKQKVEATYGYKIPDSDGRRHPLTLTVSDYKRRRGLL 174
ISLA L+++GGP+G +ARKQK+EAT GYKIPD+DGRRH LTL+VSDYKRRRGLL
Sbjct: 624 ISLAVLEQYGGPKGQFEAYMARKQKIEATMGYKIPDNDGRRHALTLSVSDYKRRRGLL 681