BLASTX nr result
ID: Zingiber23_contig00018050
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00018050
(955 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002441802.1| hypothetical protein SORBIDRAFT_08g002550 [S... 106 1e-20
ref|XP_002315214.2| hypothetical protein POPTR_0010s20890g, part... 103 7e-20
gb|EXC30728.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 102 2e-19
ref|XP_003560936.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 101 4e-19
ref|XP_003573045.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 101 5e-19
ref|NP_001045539.1| Os01g0972000 [Oryza sativa Japonica Group] g... 100 6e-19
gb|EXB75454.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 100 8e-19
ref|XP_003543320.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 100 8e-19
gb|EOY08709.1| RING-H2 finger C1A, putative [Theobroma cacao] 100 1e-18
gb|EAY77404.1| hypothetical protein OsI_05393 [Oryza sativa Indi... 100 1e-18
ref|XP_006845926.1| hypothetical protein AMTR_s00157p00061490 [A... 100 1e-18
ref|XP_004954037.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 100 1e-18
gb|EOX97347.1| RING/U-box superfamily protein, putative [Theobro... 100 1e-18
gb|ACU19744.1| unknown [Glycine max] 100 1e-18
ref|XP_002283612.2| PREDICTED: E3 ubiquitin-protein ligase RING1... 100 1e-18
ref|XP_004250323.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 99 2e-18
gb|ESW18178.1| hypothetical protein PHAVU_006G019600g [Phaseolus... 99 2e-18
gb|EOY16234.1| RING/U-box superfamily protein, putative [Theobro... 99 2e-18
gb|ESW17493.1| hypothetical protein PHAVU_007G243900g [Phaseolus... 99 3e-18
ref|XP_002312107.2| zinc finger family protein [Populus trichoca... 99 3e-18
>ref|XP_002441802.1| hypothetical protein SORBIDRAFT_08g002550 [Sorghum bicolor]
gi|241942495|gb|EES15640.1| hypothetical protein
SORBIDRAFT_08g002550 [Sorghum bicolor]
Length = 208
Score = 106 bits (265), Expect = 1e-20
Identities = 55/119 (46%), Positives = 73/119 (61%), Gaps = 4/119 (3%)
Frame = +2
Query: 530 SPASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSL 709
+PA ASI+ALPTV +SE A CA+CKD+ L +AARRLPC H+YHS CIVPWL +
Sbjct: 91 TPAPAASIEALPTVEVSEPGAV----CAICKDDLPLAAAARRLPCGHLYHSSCIVPWLEV 146
Query: 710 HNSCPVCRSPIPAPDEYSVAASGPVLPSSVS---AVGEGVDDSLPL-ALSTVDEEAMVL 874
HNSCP+CR +P+ + A P P+S G D +P A+S EE +++
Sbjct: 147 HNSCPICRCRLPSENTGPAAGEVPPAPASEQDPPPAAAGTDLQVPAQAVSGEGEETIIV 205
>ref|XP_002315214.2| hypothetical protein POPTR_0010s20890g, partial [Populus
trichocarpa] gi|550330258|gb|EEF01385.2| hypothetical
protein POPTR_0010s20890g, partial [Populus trichocarpa]
Length = 465
Score = 103 bits (258), Expect = 7e-20
Identities = 46/104 (44%), Positives = 68/104 (65%)
Frame = +2
Query: 533 PASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSLH 712
PAS ++I+++PTV I+E + CAVCK+ F L S AR +PC HIYH+DCI+PWLS+
Sbjct: 174 PASKSAIESMPTVIINESHTFTESHCAVCKEAFELESEAREMPCKHIYHTDCILPWLSIR 233
Query: 713 NSCPVCRSPIPAPDEYSVAASGPVLPSSVSAVGEGVDDSLPLAL 844
NSCPVCR +P+ D+ G LP + + G ++++ L +
Sbjct: 234 NSCPVCRHELPSGDDDGEDGVGSPLPEAGNGQGNNEEEAVGLTI 277
>gb|EXC30728.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 322
Score = 102 bits (254), Expect = 2e-19
Identities = 45/72 (62%), Positives = 55/72 (76%)
Frame = +2
Query: 533 PASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSLH 712
PAS +S+DA+PT+ IS S C VCKD+F L S AR++PC+HIYHSDCI+PWLS H
Sbjct: 159 PASRSSMDAMPTIKISNRHLRSDSHCPVCKDKFELGSEARQMPCNHIYHSDCIIPWLSQH 218
Query: 713 NSCPVCRSPIPA 748
NSCPVCR +PA
Sbjct: 219 NSCPVCRQELPA 230
>ref|XP_003560936.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 335
Score = 101 bits (252), Expect = 4e-19
Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = +2
Query: 530 SPASVASIDALPTVCISEVDAAS-FPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLS 706
+PA ++IDALPTV +S +S C VCK+EF L AAR LPC H YHS+CIVPWL
Sbjct: 167 APAPASAIDALPTVRVSPAHLSSDSQQCPVCKEEFELGEAARELPCKHAYHSECIVPWLR 226
Query: 707 LHNSCPVCRSPIPAPD 754
LHNSCPVCR +P PD
Sbjct: 227 LHNSCPVCRQELPVPD 242
>ref|XP_003573045.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 328
Score = 101 bits (251), Expect = 5e-19
Identities = 44/72 (61%), Positives = 53/72 (73%)
Frame = +2
Query: 530 SPASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSL 709
+PA+ ++ID+LPTV I+ A C VCK+EF L AAR LPC H YHSDCI+PWL L
Sbjct: 167 APAAASAIDSLPTVRITATHMADGSQCPVCKEEFELGEAARELPCKHAYHSDCIMPWLRL 226
Query: 710 HNSCPVCRSPIP 745
HNSCPVCRS +P
Sbjct: 227 HNSCPVCRSQLP 238
>ref|NP_001045539.1| Os01g0972000 [Oryza sativa Japonica Group]
gi|57899217|dbj|BAD87366.1| RING-H2 finger protein-like
[Oryza sativa Japonica Group]
gi|113535070|dbj|BAF07453.1| Os01g0972000 [Oryza sativa
Japonica Group] gi|125573478|gb|EAZ14993.1| hypothetical
protein OsJ_04929 [Oryza sativa Japonica Group]
gi|215741003|dbj|BAG97498.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 334
Score = 100 bits (250), Expect = 6e-19
Identities = 46/107 (42%), Positives = 68/107 (63%)
Frame = +2
Query: 533 PASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSLH 712
PAS A++D++PT+ I A+ CAVCK+ F L + AR +PC+HIYH +CI+PWL+LH
Sbjct: 106 PASKAAVDSMPTILIGACHLAADSHCAVCKEPFHLAAEAREMPCAHIYHHNCILPWLALH 165
Query: 713 NSCPVCRSPIPAPDEYSVAASGPVLPSSVSAVGEGVDDSLPLALSTV 853
NSCPVCR +P D S A+ ++ +A G +D+ + T+
Sbjct: 166 NSCPVCRHRMPTDDHDSTNAA-----AAQAAAGSSDEDATTVGTLTI 207
>gb|EXB75454.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 281
Score = 100 bits (249), Expect = 8e-19
Identities = 57/129 (44%), Positives = 77/129 (59%)
Frame = +2
Query: 533 PASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSLH 712
PAS +SI A+PT+ IS+VD CAVCKD F +AA+RLPCSH+YH+DCI+PWL LH
Sbjct: 101 PASKSSIAAIPTIEISDVDLC----CAVCKDRFVAGAAAKRLPCSHLYHADCILPWLELH 156
Query: 713 NSCPVCRSPIPAPDEYSVAASGPVLPSSVSAVGEGVDDSLPLALSTVDEEAMVLTAALWQ 892
NSCP+CR +P +E S + P L GE + S + L + E+ + L
Sbjct: 157 NSCPLCRFRLPL-EEKSKSKKSPDL-------GEVFESSEEMVL--MAEDWFDYASTLRY 206
Query: 893 VRSQHRLSF 919
+ +H L F
Sbjct: 207 IARRHNLVF 215
>ref|XP_003543320.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1
[Glycine max] gi|571496504|ref|XP_006593629.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform X2 [Glycine max]
Length = 306
Score = 100 bits (249), Expect = 8e-19
Identities = 54/123 (43%), Positives = 74/123 (60%)
Frame = +2
Query: 533 PASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSLH 712
PAS +SIDA+PT+ I+ S C VCK+ F L S AR++PC+H+YHSDCIVPWL LH
Sbjct: 181 PASHSSIDAMPTIKITHEHLQSDSHCPVCKERFELGSEARKMPCNHVYHSDCIVPWLVLH 240
Query: 713 NSCPVCRSPIPAPDEYSVAASGPVLPSSVSAVGEGVDDSLPLALSTVDEEAMVLTAALWQ 892
NSCPVCR +P P E++ ++ G + + S G D S ++ L + LW
Sbjct: 241 NSCPVCRVELP-PKEHT-SSRGRRIWGNGSGSGSSNDISRGRENRQMNNGRRNLLSYLWP 298
Query: 893 VRS 901
R+
Sbjct: 299 FRT 301
>gb|EOY08709.1| RING-H2 finger C1A, putative [Theobroma cacao]
Length = 312
Score = 100 bits (248), Expect = 1e-18
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +2
Query: 533 PASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSLH 712
PAS +SIDA+PT+ IS S C VCKD+F L S AR++PC+HIYHSDCI+PWL H
Sbjct: 161 PASRSSIDAMPTIKISRRHLHSDSHCPVCKDKFELGSEARQMPCNHIYHSDCIIPWLEQH 220
Query: 713 NSCPVCRSPIP 745
NSCPVCR +P
Sbjct: 221 NSCPVCRQELP 231
>gb|EAY77404.1| hypothetical protein OsI_05393 [Oryza sativa Indica Group]
Length = 332
Score = 100 bits (248), Expect = 1e-18
Identities = 46/107 (42%), Positives = 67/107 (62%)
Frame = +2
Query: 533 PASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSLH 712
PAS A++D++PT+ I A+ CAVCK+ F L + AR +PC+HIYH CI+PWL+LH
Sbjct: 106 PASKAAVDSMPTILIGACHLAADSHCAVCKEPFHLAAEAREMPCAHIYHHHCILPWLALH 165
Query: 713 NSCPVCRSPIPAPDEYSVAASGPVLPSSVSAVGEGVDDSLPLALSTV 853
NSCPVCR +P D S A+ ++ +A G +D+ + T+
Sbjct: 166 NSCPVCRHRMPTDDHDSTNAA-----AAQAAAGSSDEDATTVGTLTI 207
>ref|XP_006845926.1| hypothetical protein AMTR_s00157p00061490 [Amborella trichopoda]
gi|548848581|gb|ERN07601.1| hypothetical protein
AMTR_s00157p00061490 [Amborella trichopoda]
Length = 267
Score = 99.8 bits (247), Expect = 1e-18
Identities = 43/75 (57%), Positives = 52/75 (69%)
Frame = +2
Query: 533 PASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSLH 712
PA ++IDA+P V IS S P+C VCK+EF + AR +PC H+YH DCIVPWLSLH
Sbjct: 120 PAPRSAIDAMPRVQISPAHLGSDPNCPVCKEEFEVRMEAREMPCKHLYHEDCIVPWLSLH 179
Query: 713 NSCPVCRSPIPAPDE 757
NSCPVCR +P E
Sbjct: 180 NSCPVCRLELPVATE 194
>ref|XP_004954037.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Setaria italica]
Length = 311
Score = 99.8 bits (247), Expect = 1e-18
Identities = 43/72 (59%), Positives = 53/72 (73%)
Frame = +2
Query: 530 SPASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSL 709
+PA ++ID+LPTV I+ + P C VCK++F L AAR+LPC H YHSDCIVPWL L
Sbjct: 159 APAPSSAIDSLPTVRITAAHLSDGPQCPVCKEDFELGEAARQLPCKHAYHSDCIVPWLRL 218
Query: 710 HNSCPVCRSPIP 745
HNSCPVCR +P
Sbjct: 219 HNSCPVCRYQLP 230
>gb|EOX97347.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 320
Score = 99.8 bits (247), Expect = 1e-18
Identities = 46/98 (46%), Positives = 63/98 (64%)
Frame = +2
Query: 533 PASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSLH 712
PA+ ++++ALPTV I+E + C VCKDEF + AR LPC H+YHSDCIVPWLS+H
Sbjct: 170 PAAASAVEALPTVKITETHLINSTHCPVCKDEFEVGGEARELPCKHLYHSDCIVPWLSMH 229
Query: 713 NSCPVCRSPIPAPDEYSVAASGPVLPSSVSAVGEGVDD 826
N+CPVCR I D+ + + + +G GV+D
Sbjct: 230 NTCPVCRFEI--NDDSNATDDDEIGEINFDDIGFGVED 265
>gb|ACU19744.1| unknown [Glycine max]
Length = 255
Score = 99.8 bits (247), Expect = 1e-18
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = +2
Query: 533 PASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSLH 712
PAS +SIDA+PT+ I+ S C VCK+ F L S AR++PC+H+YHSDCIVPWL LH
Sbjct: 130 PASHSSIDAMPTIKITHEHLQSDSHCPVCKERFELGSEARKMPCNHVYHSDCIVPWLVLH 189
Query: 713 NSCPVCRSPIPAPDEYS 763
NSCPVCR +P P E++
Sbjct: 190 NSCPVCRVELP-PKEHT 205
>ref|XP_002283612.2| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Vitis
vinifera]
Length = 269
Score = 99.8 bits (247), Expect = 1e-18
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +2
Query: 533 PASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSLH 712
PAS +SIDA+PT+ I++ S C VCKD F L S AR++PC+HIYHSDCIVPWL H
Sbjct: 115 PASRSSIDAMPTIKITQKHLRSDSHCPVCKDRFELGSEARKMPCNHIYHSDCIVPWLVQH 174
Query: 713 NSCPVCRSPIP 745
NSCPVCR +P
Sbjct: 175 NSCPVCRHELP 185
>ref|XP_004250323.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
lycopersicum]
Length = 333
Score = 99.4 bits (246), Expect = 2e-18
Identities = 50/127 (39%), Positives = 69/127 (54%)
Frame = +2
Query: 530 SPASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSL 709
+PA I ++PTV I+ C VCK++F + AR LPC HIYHSDCIVPWL L
Sbjct: 201 APAPEPIIHSIPTVVIAAAHLKDDSECPVCKEKFKIGGEARELPCKHIYHSDCIVPWLRL 260
Query: 710 HNSCPVCRSPIPAPDEYSVAASGPVLPSSVSAVGEGVDDSLPLALSTVDEEAMVLTAALW 889
HNSCPVCR+P+P E V +S + V++ + + + A+LW
Sbjct: 261 HNSCPVCRNPVPVTSEAQVDSS-----------DDCVEEEVRMNRQRRCFRLRQMAASLW 309
Query: 890 QVRSQHR 910
RS++R
Sbjct: 310 PFRSRYR 316
>gb|ESW18178.1| hypothetical protein PHAVU_006G019600g [Phaseolus vulgaris]
Length = 305
Score = 99.0 bits (245), Expect = 2e-18
Identities = 43/71 (60%), Positives = 54/71 (76%)
Frame = +2
Query: 533 PASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSLH 712
PA+ +SIDA+PT+ I+ S CAVCK++F L S AR++PC+HIYHSDCIVPWL H
Sbjct: 179 PAARSSIDAMPTIKITNEHLQSDSHCAVCKEKFELSSEARKMPCAHIYHSDCIVPWLVQH 238
Query: 713 NSCPVCRSPIP 745
NSCPVCR +P
Sbjct: 239 NSCPVCRVELP 249
>gb|EOY16234.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 356
Score = 99.0 bits (245), Expect = 2e-18
Identities = 42/71 (59%), Positives = 53/71 (74%)
Frame = +2
Query: 533 PASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSLH 712
PA ++IDA+PTV I++ ++ C VCK+EF + AR LPC+HIYHSDCIVPWL LH
Sbjct: 214 PAPESTIDAIPTVRITDTHLSNDSQCPVCKEEFKVGGEARELPCNHIYHSDCIVPWLRLH 273
Query: 713 NSCPVCRSPIP 745
NSCPVCR +P
Sbjct: 274 NSCPVCRQELP 284
>gb|ESW17493.1| hypothetical protein PHAVU_007G243900g [Phaseolus vulgaris]
gi|561018690|gb|ESW17494.1| hypothetical protein
PHAVU_007G243900g [Phaseolus vulgaris]
gi|561018691|gb|ESW17495.1| hypothetical protein
PHAVU_007G243900g [Phaseolus vulgaris]
gi|561018692|gb|ESW17496.1| hypothetical protein
PHAVU_007G243900g [Phaseolus vulgaris]
Length = 308
Score = 98.6 bits (244), Expect = 3e-18
Identities = 43/72 (59%), Positives = 54/72 (75%)
Frame = +2
Query: 530 SPASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSL 709
+PAS +SIDA+PT+ I++ S C VCKD+F L S AR++PC H+YHSDCIVPWL
Sbjct: 160 APASRSSIDAMPTIKITQRHLRSDSHCPVCKDKFELGSEARQMPCHHLYHSDCIVPWLVQ 219
Query: 710 HNSCPVCRSPIP 745
HNSCPVCR +P
Sbjct: 220 HNSCPVCRQELP 231
>ref|XP_002312107.2| zinc finger family protein [Populus trichocarpa]
gi|550332509|gb|EEE89474.2| zinc finger family protein
[Populus trichocarpa]
Length = 474
Score = 98.6 bits (244), Expect = 3e-18
Identities = 46/106 (43%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Frame = +2
Query: 533 PASVASIDALPTVCISEVDAASFPSCAVCKDEFALLSAARRLPCSHIYHSDCIVPWLSLH 712
PAS ++I+++PTV ++E + CAVCK+ F L S AR +PC HIYH+DCI+PWLS+
Sbjct: 174 PASKSAIESMPTVIVNESHIFTESHCAVCKEAFELESEAREMPCKHIYHTDCILPWLSIR 233
Query: 713 NSCPVCRSPIPA-PDEYSVAASGPVLPSSVSAVGEGVDDSLPLALS 847
NSCPVCR +P+ D+ +G V P + G+G ++ + L+
Sbjct: 234 NSCPVCRRELPSGDDDGGDGDNGVVSPLPEAGNGQGNNEEEAVGLT 279