BLASTX nr result
ID: Zingiber23_contig00017803
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00017803
(548 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15262.3| unnamed protein product [Vitis vinifera] 113 3e-23
ref|XP_002273058.1| PREDICTED: nuclear ribonuclease Z isoform 1 ... 112 8e-23
ref|XP_004951266.1| PREDICTED: nuclear ribonuclease Z-like [Seta... 109 5e-22
ref|XP_004951256.1| PREDICTED: nuclear ribonuclease Z-like isofo... 109 5e-22
ref|XP_004951255.1| PREDICTED: nuclear ribonuclease Z-like isofo... 109 5e-22
ref|XP_004299394.1| PREDICTED: nuclear ribonuclease Z-like [Frag... 106 3e-21
ref|NP_001046280.1| Os02g0214300 [Oryza sativa Japonica Group] g... 105 7e-21
ref|XP_002453639.1| hypothetical protein SORBIDRAFT_04g009740 [S... 105 7e-21
gb|EAZ22222.1| hypothetical protein OsJ_05878 [Oryza sativa Japo... 105 7e-21
ref|XP_006651073.1| PREDICTED: nuclear ribonuclease Z-like, part... 104 1e-20
ref|XP_006302656.1| hypothetical protein CARUB_v10020760mg [Caps... 104 1e-20
gb|AAG52354.1|AC011765_6 unknown protein; 121665-123450 [Arabido... 104 1e-20
gb|AAD55271.1|AC008263_2 ESTs gb|AA067482 and gb|AI100542 come f... 104 1e-20
ref|NP_177608.2| nuclear ribonuclease Z [Arabidopsis thaliana] g... 104 1e-20
gb|AFW65823.1| hypothetical protein ZEAMMB73_730401 [Zea mays] g... 104 1e-20
ref|XP_002887553.1| hypothetical protein ARALYDRAFT_476606 [Arab... 104 1e-20
gb|ACN36299.1| unknown [Zea mays] 104 1e-20
ref|NP_001152148.1| LOC100285786 [Zea mays] gi|195653199|gb|ACG4... 104 1e-20
gb|ACF83746.1| unknown [Zea mays] gi|413925893|gb|AFW65825.1| nu... 104 1e-20
gb|EXB20724.1| hypothetical protein L484_007631 [Morus notabilis] 104 2e-20
>emb|CBI15262.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 113 bits (283), Expect = 3e-23
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Frame = +3
Query: 312 MGSRRSKADSEASAEQSSLVPRK-KPLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGRC 488
+ SRR K ++E +S+V +K K + IEGYPVEGLSIGGQETC+I PSLKLAFDIGRC
Sbjct: 36 LSSRRMK-----NSEANSIVTKKEKGIQIEGYPVEGLSIGGQETCIILPSLKLAFDIGRC 90
Query: 489 PQRAISQEFLFITHGHMDHI 548
PQRAISQ+FLFI+HGHMDHI
Sbjct: 91 PQRAISQDFLFISHGHMDHI 110
>ref|XP_002273058.1| PREDICTED: nuclear ribonuclease Z isoform 1 [Vitis vinifera]
Length = 290
Score = 112 bits (279), Expect = 8e-23
Identities = 53/68 (77%), Positives = 62/68 (91%), Gaps = 1/68 (1%)
Frame = +3
Query: 348 SAEQSSLVPRK-KPLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCPQRAISQEFLFI 524
++E +S+V +K K + IEGYPVEGLSIGGQETC+I PSLKLAFDIGRCPQRAISQ+FLFI
Sbjct: 3 NSEANSIVTKKEKGIQIEGYPVEGLSIGGQETCIILPSLKLAFDIGRCPQRAISQDFLFI 62
Query: 525 THGHMDHI 548
+HGHMDHI
Sbjct: 63 SHGHMDHI 70
>ref|XP_004951266.1| PREDICTED: nuclear ribonuclease Z-like [Setaria italica]
Length = 309
Score = 109 bits (272), Expect = 5e-22
Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 7/88 (7%)
Frame = +3
Query: 306 AEMGSRRSKADSEASAEQ--SSLVPRKKP-----LVIEGYPVEGLSIGGQETCVIFPSLK 464
A++ ++A S A+A S+ P +P L IEGYPVEGLSIGGQETCVIFP+L
Sbjct: 2 AKVSESAAEAASTAAAPPLTSASAPPSRPKAKHRLEIEGYPVEGLSIGGQETCVIFPTLS 61
Query: 465 LAFDIGRCPQRAISQEFLFITHGHMDHI 548
LAFDIGRCPQRAISQEFLFI+HGH+DHI
Sbjct: 62 LAFDIGRCPQRAISQEFLFISHGHLDHI 89
>ref|XP_004951256.1| PREDICTED: nuclear ribonuclease Z-like isoform X2 [Setaria italica]
Length = 287
Score = 109 bits (272), Expect = 5e-22
Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 7/88 (7%)
Frame = +3
Query: 306 AEMGSRRSKADSEASAEQ--SSLVPRKKP-----LVIEGYPVEGLSIGGQETCVIFPSLK 464
A++ ++A S A+A S+ P +P L IEGYPVEGLSIGGQETCVIFP+L
Sbjct: 2 AKVSESAAEAASTAAAPPLTSASAPPSRPKAKHRLEIEGYPVEGLSIGGQETCVIFPTLS 61
Query: 465 LAFDIGRCPQRAISQEFLFITHGHMDHI 548
LAFDIGRCPQRAISQEFLFI+HGH+DHI
Sbjct: 62 LAFDIGRCPQRAISQEFLFISHGHLDHI 89
>ref|XP_004951255.1| PREDICTED: nuclear ribonuclease Z-like isoform X1 [Setaria italica]
Length = 291
Score = 109 bits (272), Expect = 5e-22
Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 7/88 (7%)
Frame = +3
Query: 306 AEMGSRRSKADSEASAEQ--SSLVPRKKP-----LVIEGYPVEGLSIGGQETCVIFPSLK 464
A++ ++A S A+A S+ P +P L IEGYPVEGLSIGGQETCVIFP+L
Sbjct: 2 AKVSESAAEAASTAAAPPLTSASAPPSRPKAKHRLEIEGYPVEGLSIGGQETCVIFPTLS 61
Query: 465 LAFDIGRCPQRAISQEFLFITHGHMDHI 548
LAFDIGRCPQRAISQEFLFI+HGH+DHI
Sbjct: 62 LAFDIGRCPQRAISQEFLFISHGHLDHI 89
>ref|XP_004299394.1| PREDICTED: nuclear ribonuclease Z-like [Fragaria vesca subsp.
vesca]
Length = 299
Score = 106 bits (265), Expect = 3e-21
Identities = 48/58 (82%), Positives = 54/58 (93%)
Frame = +3
Query: 375 RKKPLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCPQRAISQEFLFITHGHMDHI 548
+ + L IEGYPVEGLSIGGQETCVIFPSLKL+FDIGRCPQRAI+Q+FLFI+H HMDHI
Sbjct: 22 KARGLTIEGYPVEGLSIGGQETCVIFPSLKLSFDIGRCPQRAIAQDFLFISHAHMDHI 79
>ref|NP_001046280.1| Os02g0214300 [Oryza sativa Japonica Group]
gi|49387940|dbj|BAD25038.1| putative nuclear
ribonuclease Z [Oryza sativa Japonica Group]
gi|113535811|dbj|BAF08194.1| Os02g0214300 [Oryza sativa
Japonica Group] gi|125538607|gb|EAY85002.1| hypothetical
protein OsI_06362 [Oryza sativa Indica Group]
Length = 302
Score = 105 bits (262), Expect = 7e-21
Identities = 49/81 (60%), Positives = 57/81 (70%)
Frame = +3
Query: 306 AEMGSRRSKADSEASAEQSSLVPRKKPLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGR 485
A G A S + + PL +EGYPVEG+SIGGQETCVIFP+L AFDIGR
Sbjct: 2 ANSGKSSPAATSTTAPPPGRPKAKAPPLTVEGYPVEGISIGGQETCVIFPTLSAAFDIGR 61
Query: 486 CPQRAISQEFLFITHGHMDHI 548
CPQRA+SQEFLFI+H H+DHI
Sbjct: 62 CPQRAVSQEFLFISHAHLDHI 82
>ref|XP_002453639.1| hypothetical protein SORBIDRAFT_04g009740 [Sorghum bicolor]
gi|241933470|gb|EES06615.1| hypothetical protein
SORBIDRAFT_04g009740 [Sorghum bicolor]
Length = 315
Score = 105 bits (262), Expect = 7e-21
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 EMGSRRSKADSEASAEQSSLVPRKKP-LVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGR 485
E+ S S + ASA S+ P+ K + IEGYPV+G+SIGGQETCVIFP+L LAFDIGR
Sbjct: 10 EVASSSSSPLTPASA--SATRPKAKHRMEIEGYPVDGVSIGGQETCVIFPTLSLAFDIGR 67
Query: 486 CPQRAISQEFLFITHGHMDHI 548
CPQRA+SQEFLF++HGH+DHI
Sbjct: 68 CPQRAVSQEFLFVSHGHLDHI 88
>gb|EAZ22222.1| hypothetical protein OsJ_05878 [Oryza sativa Japonica Group]
Length = 270
Score = 105 bits (262), Expect = 7e-21
Identities = 49/81 (60%), Positives = 57/81 (70%)
Frame = +3
Query: 306 AEMGSRRSKADSEASAEQSSLVPRKKPLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGR 485
A G A S + + PL +EGYPVEG+SIGGQETCVIFP+L AFDIGR
Sbjct: 2 ANSGKSSPAATSTTAPPPGRPKAKAPPLTVEGYPVEGISIGGQETCVIFPTLSAAFDIGR 61
Query: 486 CPQRAISQEFLFITHGHMDHI 548
CPQRA+SQEFLFI+H H+DHI
Sbjct: 62 CPQRAVSQEFLFISHAHLDHI 82
>ref|XP_006651073.1| PREDICTED: nuclear ribonuclease Z-like, partial [Oryza brachyantha]
Length = 284
Score = 104 bits (260), Expect = 1e-20
Identities = 46/55 (83%), Positives = 51/55 (92%)
Frame = +3
Query: 384 PLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCPQRAISQEFLFITHGHMDHI 548
PL +EGYPVEG+SIGGQETCVIFP+L LAFDIGRCPQRAI QEFLFI+H H+DHI
Sbjct: 10 PLTVEGYPVEGISIGGQETCVIFPTLSLAFDIGRCPQRAILQEFLFISHAHLDHI 64
>ref|XP_006302656.1| hypothetical protein CARUB_v10020760mg [Capsella rubella]
gi|482571366|gb|EOA35554.1| hypothetical protein
CARUB_v10020760mg [Capsella rubella]
Length = 280
Score = 104 bits (260), Expect = 1e-20
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +3
Query: 375 RKKPLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCPQRAISQEFLFITHGHMDHI 548
+KK + IEGYP+EGLSIGG ETC+IFPSL++AFDIGRCP RAISQ+FLFI+H HMDHI
Sbjct: 3 KKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHI 60
>gb|AAG52354.1|AC011765_6 unknown protein; 121665-123450 [Arabidopsis thaliana]
Length = 281
Score = 104 bits (260), Expect = 1e-20
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +3
Query: 375 RKKPLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCPQRAISQEFLFITHGHMDHI 548
+KK + IEGYP+EGLSIGG ETC+IFPSL++AFDIGRCP RAISQ+FLFI+H HMDHI
Sbjct: 3 KKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHI 60
>gb|AAD55271.1|AC008263_2 ESTs gb|AA067482 and gb|AI100542 come from this gene [Arabidopsis
thaliana]
Length = 290
Score = 104 bits (260), Expect = 1e-20
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +3
Query: 375 RKKPLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCPQRAISQEFLFITHGHMDHI 548
+KK + IEGYP+EGLSIGG ETC+IFPSL++AFDIGRCP RAISQ+FLFI+H HMDHI
Sbjct: 3 KKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHI 60
>ref|NP_177608.2| nuclear ribonuclease Z [Arabidopsis thaliana]
gi|88984765|sp|Q8LGU7.3|RNZN_ARATH RecName: Full=Nuclear
ribonuclease Z; Short=RNase Z; AltName: Full=Zinc
phosphodiesterase NUZ; AltName: Full=tRNA 3
endonuclease; AltName: Full=tRNase Z
gi|20975609|emb|CAD22100.1| RNase Z [Arabidopsis
thaliana] gi|90962972|gb|ABE02410.1| At1g74700
[Arabidopsis thaliana] gi|332197502|gb|AEE35623.1|
nuclear ribonuclease Z [Arabidopsis thaliana]
Length = 280
Score = 104 bits (260), Expect = 1e-20
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +3
Query: 375 RKKPLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCPQRAISQEFLFITHGHMDHI 548
+KK + IEGYP+EGLSIGG ETC+IFPSL++AFDIGRCP RAISQ+FLFI+H HMDHI
Sbjct: 3 KKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHI 60
>gb|AFW65823.1| hypothetical protein ZEAMMB73_730401 [Zea mays]
gi|413925892|gb|AFW65824.1| hypothetical protein
ZEAMMB73_730401 [Zea mays]
Length = 197
Score = 104 bits (260), Expect = 1e-20
Identities = 48/67 (71%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = +3
Query: 351 AEQSSLVPRKKPLV-IEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCPQRAISQEFLFIT 527
A S+ P+ K + IEGYPV+G+SIGGQETCVIFP+L LAFDIGRCPQRA+SQEFLF++
Sbjct: 16 ASASATRPKAKHRIEIEGYPVDGVSIGGQETCVIFPTLSLAFDIGRCPQRAVSQEFLFVS 75
Query: 528 HGHMDHI 548
HGH+DHI
Sbjct: 76 HGHLDHI 82
>ref|XP_002887553.1| hypothetical protein ARALYDRAFT_476606 [Arabidopsis lyrata subsp.
lyrata] gi|297333394|gb|EFH63812.1| hypothetical protein
ARALYDRAFT_476606 [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 104 bits (260), Expect = 1e-20
Identities = 45/58 (77%), Positives = 53/58 (91%)
Frame = +3
Query: 375 RKKPLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCPQRAISQEFLFITHGHMDHI 548
+KK + IEGYP+EGLSIGG ETC+IFPSL++AFDIGRCP RAISQ+FLFI+H HMDHI
Sbjct: 3 KKKAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHI 60
>gb|ACN36299.1| unknown [Zea mays]
Length = 197
Score = 104 bits (260), Expect = 1e-20
Identities = 48/67 (71%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = +3
Query: 351 AEQSSLVPRKKPLV-IEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCPQRAISQEFLFIT 527
A S+ P+ K + IEGYPV+G+SIGGQETCVIFP+L LAFDIGRCPQRA+SQEFLF++
Sbjct: 16 ASASATRPKAKHRIEIEGYPVDGVSIGGQETCVIFPTLSLAFDIGRCPQRAVSQEFLFVS 75
Query: 528 HGHMDHI 548
HGH+DHI
Sbjct: 76 HGHLDHI 82
>ref|NP_001152148.1| LOC100285786 [Zea mays] gi|195653199|gb|ACG46067.1| nuclear
ribonuclease Z [Zea mays]
Length = 302
Score = 104 bits (260), Expect = 1e-20
Identities = 48/67 (71%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = +3
Query: 351 AEQSSLVPRKKPLV-IEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCPQRAISQEFLFIT 527
A S+ P+ K + IEGYPV+G+SIGGQETCVIFP+L LAFDIGRCPQRA+SQEFLF++
Sbjct: 16 ASASATRPKAKHRIEIEGYPVDGVSIGGQETCVIFPTLSLAFDIGRCPQRAVSQEFLFVS 75
Query: 528 HGHMDHI 548
HGH+DHI
Sbjct: 76 HGHLDHI 82
>gb|ACF83746.1| unknown [Zea mays] gi|413925893|gb|AFW65825.1| nuclear ribonuclease
Z [Zea mays]
Length = 302
Score = 104 bits (260), Expect = 1e-20
Identities = 48/67 (71%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = +3
Query: 351 AEQSSLVPRKKPLV-IEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCPQRAISQEFLFIT 527
A S+ P+ K + IEGYPV+G+SIGGQETCVIFP+L LAFDIGRCPQRA+SQEFLF++
Sbjct: 16 ASASATRPKAKHRIEIEGYPVDGVSIGGQETCVIFPTLSLAFDIGRCPQRAVSQEFLFVS 75
Query: 528 HGHMDHI 548
HGH+DHI
Sbjct: 76 HGHLDHI 82
>gb|EXB20724.1| hypothetical protein L484_007631 [Morus notabilis]
Length = 300
Score = 104 bits (259), Expect = 2e-20
Identities = 47/77 (61%), Positives = 58/77 (75%)
Frame = +3
Query: 318 SRRSKADSEASAEQSSLVPRKKPLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCPQR 497
+R +++ E L + + L IEGYP+EGLSIGG ETC+I P+L LAFDIGRCPQR
Sbjct: 4 NRTKNSENPTKEEGEELSKKNRGLNIEGYPIEGLSIGGHETCIILPTLNLAFDIGRCPQR 63
Query: 498 AISQEFLFITHGHMDHI 548
AISQ+FLFI+H HMDHI
Sbjct: 64 AISQDFLFISHAHMDHI 80