BLASTX nr result
ID: Zingiber23_contig00017016
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00017016
(3761 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1341 0.0
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1319 0.0
ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 1317 0.0
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S... 1316 0.0
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g... 1314 0.0
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo... 1314 0.0
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe... 1311 0.0
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1303 0.0
ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1303 0.0
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 1303 0.0
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 1300 0.0
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras... 1298 0.0
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1295 0.0
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 1295 0.0
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1295 0.0
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 1294 0.0
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 1293 0.0
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1291 0.0
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 1290 0.0
tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays] 1289 0.0
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 1341 bits (3471), Expect = 0.0
Identities = 654/913 (71%), Positives = 755/913 (82%), Gaps = 2/913 (0%)
Frame = +2
Query: 488 GLHTNSRSFTSIAEAVSSTDADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKS 667
GL + + S AEA++S +ED S ++E++ +V EV + +K
Sbjct: 85 GLFGYQKGYASAAEAIAS---EEDMSGVDEVQE-------------LVEEVNKGDKLEKQ 128
Query: 668 PRMIAGMISGKYLSLHRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPFIKSLLLDW 847
P++I G+ GK+ L RRQ+K+ETEAWE+AAKEY+ELL DMCEQKLAPNLP+IKSL L W
Sbjct: 129 PKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLGW 188
Query: 848 FEPFRDAIAAEQEICKKNNSKSSHAPFFNLLPADMMAVITMHKLMGLVMTNTGHGSVHLV 1027
FEP RD IAAEQ++CK+ +++++AP+F+ LPADMMAVITMHKLMGL+MT G+GS +V
Sbjct: 189 FEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKLMGLLMTGEGNGSARVV 248
Query: 1028 HAACQIGDAIEQEVRIHRFLEXXXXXXXXXXXSEEVEGDS--VMEDQTFLRKKVTTLMKK 1201
AAC IG+AIE EVRI RF+E S +G S V ++Q LRKKV+ LMKK
Sbjct: 249 QAACHIGEAIEHEVRIQRFMEKTKKKSAS---SNNPDGGSNPVTKEQEKLRKKVSMLMKK 305
Query: 1202 QKIRQLNMIVKRQDDSKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADAPPDIRPAFR 1381
QK++Q+ IVKRQDDSKPWGQ A VGSRLIELL+ TAY+QPP Q D PPDIRPAF
Sbjct: 306 QKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFV 365
Query: 1382 HTRSTAGKEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHL 1561
HT T KE +K TRRYGVIECDP++ + L+KTARHMVIPY+PMLVPP+NWTG+DKGA+L
Sbjct: 366 HTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYL 425
Query: 1562 YLRSYVMRTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGG 1741
+L SYVMR HGARQQ++AIK+APRK ++ FEALNTLGNTKWR+NK VL V++RIW+SGG
Sbjct: 426 FLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGG 485
Query: 1742 RLADLVDREDIPLPEKPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVELKLAVARKMK 1921
RLADLVDRED+PLPE+P+TEDEAEIR ENSERHSQRCD+ELKLAVARKMK
Sbjct: 486 RLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMK 545
Query: 1922 DEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLY 2101
DE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGL WLKIHLAN+Y
Sbjct: 546 DEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVY 605
Query: 2102 AGGVDKLSYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSS 2281
AGGVDKLSY+GR+AFTENHLEDI DSADRPLEGRRWWL AEDPFQCLA CINL+EA+RSS
Sbjct: 606 AGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSS 665
Query: 2282 SPNATVSHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQ 2461
SP T+SH+PVHQDGSCNGLQHYAALGRDKLGA AVNLV+G+KPADVYS IAARV DIMQ
Sbjct: 666 SPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQ 725
Query: 2462 RDAEEDPAENPNALRARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKRLKERNLVAD 2641
RDA++DPA PNALRARLL++QVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKER +AD
Sbjct: 726 RDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIAD 785
Query: 2642 DAEIFSASCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTPLGLPVVQP 2821
+ E+FSASCYAAKTTLTALG+MFE+AR IMSWLGDCAK IAS+NHPVRW TPLGLPVVQP
Sbjct: 786 EGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQP 845
Query: 2822 YRALGXXXXXXXXXXXXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTALACKKAGLA 3001
YR LG KVMVKRQ+TAFPPNFVHSLDGSHMM+TA+AC+KAGL
Sbjct: 846 YRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLN 905
Query: 3002 FAGVHDSYWTHACDVDQLNRILREKFVELYETPILENLLESFEKSFPGLCFPPLPERGDF 3181
FAGVHDSYWTHACDVD++NRILREKFVELY PILENLLE F+KSFP L FPPLPERGDF
Sbjct: 906 FAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDF 965
Query: 3182 NLNEVLDSPYFFN 3220
+L EVL+SPYFFN
Sbjct: 966 DLREVLESPYFFN 978
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
protein product [Vitis vinifera]
Length = 1035
Score = 1319 bits (3413), Expect = 0.0
Identities = 669/1005 (66%), Positives = 786/1005 (78%), Gaps = 19/1005 (1%)
Frame = +2
Query: 263 MWRGIARTAC-RSSRNFRFSGDRPAEFPTFSCFLGSSTNSI---LCKENTIFDSSLAAR- 427
MWR IA+ A R+ R + +P FLG S + I + K T SS ++
Sbjct: 40 MWRNIAKRAIPRAPRKCVYLDSQPLS--RRYSFLGFSQDLIFPEIMKFGTFEPSSCSSSG 97
Query: 428 LLDVRFRRKGQAGVSVWEVT----GLHTNS--------RSFTSIAEAVSSTDADEDTSTI 571
++ FRR G+ V G N +S+ S+AEAVSSTD +ED S
Sbjct: 98 FSEMGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFCPKSYASVAEAVSSTDVEEDVSAS 157
Query: 572 EEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRMIAGMISGKYLSLHRRQVKIETEAWE 751
+E++ G K++ + ++N + ++ +M GM G+YL L RRQVKIETEAWE
Sbjct: 158 DEIQELL---GEMKKEE----KRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWE 210
Query: 752 QAAKEYKELLMDMCEQKLAPNLPFIKSLLLDWFEPFRDAIAAEQEICKKNNSKSSHAPFF 931
AAKEYKELLMDMCEQKLAPNLP++KSL L WFEP RDAI EQE+C+ +K+++AP+F
Sbjct: 211 LAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYF 270
Query: 932 NLLPADMMAVITMHKLMGLVMTNTGHGSVHLVHAACQIGDAIEQEVRIHRFLEXXXXXXX 1111
+ LPADMM+VITMHKL+GL+MT HGS +V AAC IGDAIEQEVRIH FLE
Sbjct: 271 DQLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKV 330
Query: 1112 XXXXSEEVEG-DSVMEDQTFLRKKVTTLMKKQKIRQLNMIVKRQDDSKPWGQAAQAMVGS 1288
+ E G D V+ +Q LRKKVT LMKKQK+ IVK D+SKPWG A+A VGS
Sbjct: 331 GKDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGS 390
Query: 1289 RLIELLMNTAYVQPPV-SQSADAPPDIRPAFRHTRSTAGKEPKKLTRRYGVIECDPVILQ 1465
RLIELLM TAY+QPPV +Q AD PPDIRPAF HT T +E KK+ RR+GVIECDP++ +
Sbjct: 391 RLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKKIGRRFGVIECDPLVKK 450
Query: 1466 RLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMRTHGARQQKQAIKKAPRKTMQ 1645
L++TARHMVIPYVPMLVPP+ WTG+DKGAHL+L SYVMRTHGARQQ++A+K+APR ++
Sbjct: 451 GLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPRNQLE 510
Query: 1646 TVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDREDIPLPEKPNTEDEAEIRXX 1825
VFEALNTLGNTKWR+NK + VV+RIW+ GG LADLVDR D+PLPEKP+TEDEA++R
Sbjct: 511 PVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEAQLRKW 570
Query: 1826 XXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLG 2005
NSERHSQRCD+ELKLAVARKMKDE+GF+YPHNLDFRGRAYPMHPYLNHLG
Sbjct: 571 KWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLG 630
Query: 2006 SDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRLAFTENHLEDIIDSAD 2185
SDLCRG+LEFAEGRPLG SGLHWLKIHLANL+AGGVDKLS++GR+ FTENHL+DI DSAD
Sbjct: 631 SDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSAD 690
Query: 2186 RPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSHIPVHQDGSCNGLQHYAALGR 2365
RPLEG+RWWL AEDPFQ LA CINL+EA+RSSSP T+SHIPVHQDGSCNGLQHYAALGR
Sbjct: 691 RPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGR 750
Query: 2366 DKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPAENPNALRARLLVNQVDRKLV 2545
D+LGA AVNLV+G+KPADVYS IAARV DIM+RDAE+DPA P+ALRAR+L+NQVDRKLV
Sbjct: 751 DQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKLV 810
Query: 2546 KQTVMTSVYGVTYVGARDQIKKRLKERNLVADDAEIFSASCYAAKTTLTALGQMFESARK 2725
KQTVMTSVYGVTY+GARDQIK+RLKERN +ADD E+F A+CYAAK TLTALG+MF++AR
Sbjct: 811 KQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAKITLTALGEMFQAARS 870
Query: 2726 IMSWLGDCAKTIASQNHPVRWTTPLGLPVVQPYRALGXXXXXXXXXXXXXXXXXXKVMVK 2905
IMSWLGDCAK IAS+N PVRWTTPLGLPVVQPYR LG +MVK
Sbjct: 871 IMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVK 930
Query: 2906 RQKTAFPPNFVHSLDGSHMMLTALACKKAGLAFAGVHDSYWTHACDVDQLNRILREKFVE 3085
RQ+TAFPPNFVHSLDGSHMM+TA+ACKKAGL FAGVHDSYWTHACDVD++NR+LREKFV+
Sbjct: 931 RQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEMNRLLREKFVQ 990
Query: 3086 LYETPILENLLESFEKSFPGLCFPPLPERGDFNLNEVLDSPYFFN 3220
LYETPILENLLESF++SFP L FPPLPERGDF+L EVL+SPYFFN
Sbjct: 991 LYETPILENLLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035
>ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Setaria italica]
Length = 1005
Score = 1317 bits (3409), Expect = 0.0
Identities = 648/917 (70%), Positives = 751/917 (81%), Gaps = 13/917 (1%)
Frame = +2
Query: 509 SFTSIAEAVSSTDADEDTSTIEEMRN------------DNSGGGGKHKDDGIVTEVKMNQ 652
S ++ AEAVSS +A+E +E +R + G H+D + Q
Sbjct: 92 SSSAAAEAVSSEEAEELHHALEIVRTQPNQNQPPPPMEEQRASGRDHRDRH--RRNRRGQ 149
Query: 653 QFQKSPRMIAGMISGKYLSLHRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPFIKS 832
Q Q + GM KY SL RRQ+++ETEAWEQAAKEY+ELL DMCEQKLAPNLP+IKS
Sbjct: 150 QAQVAAEE-HGMTYHKYASLRRRQIRVETEAWEQAAKEYRELLTDMCEQKLAPNLPYIKS 208
Query: 833 LLLDWFEPFRDAIAAEQEICKKNNSKSSHAPFFNLLPADMMAVITMHKLMGLVMTNTGHG 1012
L L WFEP RD IAAEQE+ S++SH P+FN+LPADMMAVITMHKLMGL+MT +G G
Sbjct: 209 LFLGWFEPLRDQIAAEQELVANRGSRASHGPYFNMLPADMMAVITMHKLMGLLMTGSGDG 268
Query: 1013 SVHLVHAACQIGDAIEQEVRIHRFLEXXXXXXXXXXXSEEVEGDS-VMEDQTFLRKKVTT 1189
SV ++ AACQIG+AIE EVRIHRFLE +EE DS + ++Q LRKKVT
Sbjct: 269 SVRVIQAACQIGEAIEHEVRIHRFLEKTRKKSNKEKENEEEIFDSDIAKEQQRLRKKVTD 328
Query: 1190 LMKKQKIRQLNMIVKRQDDSKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADAPPDIR 1369
LMKKQK+RQ+ IVK QDDS+PWGQ A A VGSRLIEL + TA++QPP SQS+D PDIR
Sbjct: 329 LMKKQKLRQVRKIVKNQDDSRPWGQDAHAKVGSRLIELFIETAHIQPPASQSSDGLPDIR 388
Query: 1370 PAFRHTRSTAGKEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDK 1549
PAFRH T KE +K +RRYGVI+CDP++ Q LD+TA+HMVIPY+PML+PPI WTG+DK
Sbjct: 389 PAFRHEMRTVPKEQQKHSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDK 448
Query: 1550 GAHLYLRSYVMRTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIW 1729
GAHL+L SYVMRTHGARQQ++A+K+APR+ MQ+VFEALNTLG+TKWRVNK VLS+++RIW
Sbjct: 449 GAHLFLPSYVMRTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIIDRIW 508
Query: 1730 SSGGRLADLVDREDIPLPEKPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVELKLAVA 1909
SSGGRLADLVDR D+PLPEKP+TEDE ++ NSERHSQRCDVELKLAVA
Sbjct: 509 SSGGRLADLVDRTDVPLPEKPDTEDETVLKKWRWHTRSVKKGNSERHSQRCDVELKLAVA 568
Query: 1910 RKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHL 2089
RKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLG+SGL WLKIHL
Sbjct: 569 RKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGESGLRWLKIHL 628
Query: 2090 ANLYAGGVDKLSYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEA 2269
ANLYAGGVDKLSY GR+AF ENHLE+I DSADRPLEG+RWWLGAEDPFQCLAVC+NL EA
Sbjct: 629 ANLYAGGVDKLSYAGRIAFAENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEA 688
Query: 2270 VRSSSPNATVSHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVR 2449
+RS SP AT+SHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLV+G+KPADVYS IA RV
Sbjct: 689 LRSPSPEATISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYSGIATRVV 748
Query: 2450 DIMQRDAEEDPAENPNALRARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKRLKERN 2629
+IM+RD+++DP+ +P+A RARL+++QVDRKLVKQTVMTSVYGVTYVGAR+QIK+RLKER
Sbjct: 749 EIMRRDSQKDPSTDPDAARARLILDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERG 808
Query: 2630 LVADDAEIFSASCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTPLGLP 2809
++ADDAE+F ASCYAAK TLTALG+MF++AR IM+WLGDCAK IA +N PV+WTTPLGLP
Sbjct: 809 VIADDAELFGASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVKWTTPLGLP 868
Query: 2810 VVQPYRALGXXXXXXXXXXXXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTALACKK 2989
VVQPYR LG KVMVKRQ+TAFPPNFVHSLDGSHMM+TA+ACK+
Sbjct: 869 VVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKR 928
Query: 2990 AGLAFAGVHDSYWTHACDVDQLNRILREKFVELYETPILENLLESFEKSFPGLCFPPLPE 3169
GL FAGVHDSYWTHACDVD +N+ILREKFVELY+TPILENLLESFEKSFP L FPPLPE
Sbjct: 929 QGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPE 988
Query: 3170 RGDFNLNEVLDSPYFFN 3220
RGDF++ +VL+SPYFFN
Sbjct: 989 RGDFDMKDVLESPYFFN 1005
>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
gi|241924412|gb|EER97556.1| hypothetical protein
SORBIDRAFT_02g039520 [Sorghum bicolor]
Length = 976
Score = 1316 bits (3405), Expect = 0.0
Identities = 650/921 (70%), Positives = 751/921 (81%), Gaps = 19/921 (2%)
Frame = +2
Query: 515 TSIAEAVSSTDADEDTSTIEEM---------------RNDNSGGGGKHKDDGIVTEVKMN 649
+S AEAVSS DA+E IEE+ + G H+ + + +
Sbjct: 61 SSAAEAVSSEDAEELHHAIEEIVRAQPSQNLPRPQSVAEERQAPGRDHR-----SRHRRS 115
Query: 650 QQFQKSPRMIA--GMISGKYLSLHRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPF 823
+ + M A GM +Y SL RRQ+++ETEAWEQAAKEY+ELL DMCEQKLAPNLP+
Sbjct: 116 GRGRHVEVMAAEHGMTYHRYTSLRRRQIRVETEAWEQAAKEYRELLADMCEQKLAPNLPY 175
Query: 824 IKSLLLDWFEPFRDAIAAEQEICKKNNSKSSHAPFFNLLPADMMAVITMHKLMGLVMTNT 1003
IKSL L WFEP RD I EQE+ S++SH P+FN+LPADMMAVITMHKLMGL+MT +
Sbjct: 176 IKSLFLGWFEPLRDQIVTEQELVADPGSRASHGPYFNMLPADMMAVITMHKLMGLLMTGS 235
Query: 1004 GHGSVHLVHAACQIGDAIEQEVRIHRFLEXXXXXXXXXXXSEE-VEGDS-VMEDQTFLRK 1177
G GSV ++ AACQIG+AIE EVRI+RFLE EE GD+ + ++Q LRK
Sbjct: 236 GDGSVRVIQAACQIGEAIEHEVRINRFLEKTRKKSNKEMEKEEEAAGDTDIAKEQQRLRK 295
Query: 1178 KVTTLMKKQKIRQLNMIVKRQDDSKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADAP 1357
KVT LMKKQK+RQ+ IVK QD+S+PWGQ QA VGSRLIEL M+TA++QPP SQS+D
Sbjct: 296 KVTDLMKKQKLRQVRNIVKNQDNSRPWGQDVQAKVGSRLIELFMDTAHIQPPASQSSDGL 355
Query: 1358 PDIRPAFRHTRSTAGKEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWT 1537
PDIRPAFRH T KE +K +RRYGVI+CDP++ Q LD+TA+HMVIPY+PML+PPI WT
Sbjct: 356 PDIRPAFRHEMRTVAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWT 415
Query: 1538 GFDKGAHLYLRSYVMRTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVV 1717
G+DKGAHL+L SYVMRTHGARQQ++A+K+APR+ MQ+VFEALNTLG+TKWRVNK VLS+V
Sbjct: 416 GYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIV 475
Query: 1718 ERIWSSGGRLADLVDREDIPLPEKPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVELK 1897
+RIWSSGGRLADLVDR D+PLPEKP+TEDE I+ ENSERHSQRCDVELK
Sbjct: 476 DRIWSSGGRLADLVDRTDVPLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVELK 535
Query: 1898 LAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWL 2077
LAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLHWL
Sbjct: 536 LAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWL 595
Query: 2078 KIHLANLYAGGVDKLSYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCIN 2257
KIHLANLYAGGVDKLSYDGR+AFTENHLE+I DSADRPLEG+RWWLGAEDPFQCLAVC+N
Sbjct: 596 KIHLANLYAGGVDKLSYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMN 655
Query: 2258 LAEAVRSSSPNATVSHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIA 2437
L EA+RSSSP T+SHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLV+G+KPADVY+ IA
Sbjct: 656 LTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIA 715
Query: 2438 ARVRDIMQRDAEEDPAENPNALRARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKRL 2617
RV +IM+ DA++DP+ +P+ RARL+V+QVDRKLVKQTVMTSVYGVTYVGARDQIK+RL
Sbjct: 716 TRVLEIMRMDAQKDPSIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRL 775
Query: 2618 KERNLVADDAEIFSASCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 2797
KER ++ D+AE+F ASCYAAK TLTALG+MF++AR IM+WLGDCAK IA +N PVRWTTP
Sbjct: 776 KERGVIPDEAELFGASCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTP 835
Query: 2798 LGLPVVQPYRALGXXXXXXXXXXXXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTAL 2977
LGLPVVQPYR LG KVMVKRQ+TAFPPNFVHSLDGSHMM+TA+
Sbjct: 836 LGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAV 895
Query: 2978 ACKKAGLAFAGVHDSYWTHACDVDQLNRILREKFVELYETPILENLLESFEKSFPGLCFP 3157
ACK+ GL FAGVHDSYWTHACDVD +N+ILREKFVELY+TPILENLLESFEKSFP L FP
Sbjct: 896 ACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFP 955
Query: 3158 PLPERGDFNLNEVLDSPYFFN 3220
PLPERGDF++ EVL+SPYFFN
Sbjct: 956 PLPERGDFDMKEVLESPYFFN 976
>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
single subunit RNA polymerase [Oryza sativa Japonica
Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
sativa Japonica Group]
Length = 1017
Score = 1314 bits (3400), Expect = 0.0
Identities = 649/933 (69%), Positives = 752/933 (80%), Gaps = 27/933 (2%)
Frame = +2
Query: 503 SRSFTSIAEAVSSTDADEDTSTIEEM-RNDNS----------------GGGGKHKDDGIV 631
S S AE+VSS + DE I E+ R D S G GKH + +
Sbjct: 85 SSSAAVAAESVSSEEVDELHHAIGEIARGDPSVSAPAPAAGQEGHRRRSGRGKHSAEAMA 144
Query: 632 TEVKMNQQFQK---------SPRMIAGMISGKYLSLHRRQVKIETEAWEQAAKEYKELLM 784
+ ++ + G+ KY L RRQ++IETEAWEQAA+EY+ELL
Sbjct: 145 VPAAGQEGHRRRSGRGKHSAEAMAVHGVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLA 204
Query: 785 DMCEQKLAPNLPFIKSLLLDWFEPFRDAIAAEQEICKKNNSKSSHAPFFNLLPADMMAVI 964
DMC+QKLAPNLP++KSL L WFEP RD I AEQE+ + +++SHA +FN+LPADMMAVI
Sbjct: 205 DMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGARASHARYFNMLPADMMAVI 264
Query: 965 TMHKLMGLVMTNTGHGSVHLVHAACQIGDAIEQEVRIHRFLEXXXXXXXXXXXSEEVEGD 1144
TMHKLMGL+MT +G GSV ++ AACQIG+AIE EVRIH+FLE +EE GD
Sbjct: 265 TMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGD 324
Query: 1145 S-VMEDQTFLRKKVTTLMKKQKIRQLNMIVKRQDDSKPWGQAAQAMVGSRLIELLMNTAY 1321
S + ++Q LRKKVT LMKKQKIRQ+ IVK+QD+SKPWGQ A A VGSRLIEL++ TAY
Sbjct: 325 SDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAY 384
Query: 1322 VQPPVSQSADAPPDIRPAFRHTRSTAGKEPKKLTRRYGVIECDPVILQRLDKTARHMVIP 1501
+QPP SQSAD PPDIRPAF H T +E +K +RRYGVI+CDP++ Q LD+TA+HMVIP
Sbjct: 385 IQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIP 444
Query: 1502 YVPMLVPPINWTGFDKGAHLYLRSYVMRTHGARQQKQAIKKAPRKTMQTVFEALNTLGNT 1681
Y+PML+PPI+WTG+DKGAHL+L SYVMRTHGARQQ+ A+++APR+ MQ+VFEALNTLG+T
Sbjct: 445 YMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGST 504
Query: 1682 KWRVNKSVLSVVERIWSSGGRLADLVDREDIPLPEKPNTEDEAEIRXXXXXXXXXXXENS 1861
KWRVNK VLS+V+RIWSSGGRLADLVDR D+ LPEKP+TEDE +++ ENS
Sbjct: 505 KWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENS 564
Query: 1862 ERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAE 2041
ERHSQRCDVELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAE
Sbjct: 565 ERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAE 624
Query: 2042 GRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRLAFTENHLEDIIDSADRPLEGRRWWLGA 2221
GRPLGKSGL WLKIHLANLYAGGVDKLSYDGR+AFTENHLEDI DSADRPLEG+RWWLGA
Sbjct: 625 GRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGA 684
Query: 2222 EDPFQCLAVCINLAEAVRSSSPNATVSHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVS 2401
EDPFQCLAVCINL EA+RS SP +SHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLV+
Sbjct: 685 EDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVA 744
Query: 2402 GDKPADVYSEIAARVRDIMQRDAEEDPAENPNALRARLLVNQVDRKLVKQTVMTSVYGVT 2581
G+KPADVY+ IA RV +IM+ DA +DPA +P+A RARLL++QVDRKLVKQTVMTSVYGVT
Sbjct: 745 GEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVT 804
Query: 2582 YVGARDQIKKRLKERNLVADDAEIFSASCYAAKTTLTALGQMFESARKIMSWLGDCAKTI 2761
YVGAR+QIK+RLKER+++ DD+E+FSASCYAAK TLTALG+MF++AR IM+WLGDCAK I
Sbjct: 805 YVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVI 864
Query: 2762 ASQNHPVRWTTPLGLPVVQPYRALGXXXXXXXXXXXXXXXXXXKVMVKRQKTAFPPNFVH 2941
A +N PVRWTTPLGLPVVQPYR LG KVMVKRQ+TAFPPNFVH
Sbjct: 865 ACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVH 924
Query: 2942 SLDGSHMMLTALACKKAGLAFAGVHDSYWTHACDVDQLNRILREKFVELYETPILENLLE 3121
SLDGSHMM+TA+ACK+ GL FAGVHDSYWTHACDVD +N+ILREKFVELY+TPILENLLE
Sbjct: 925 SLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLE 984
Query: 3122 SFEKSFPGLCFPPLPERGDFNLNEVLDSPYFFN 3220
SFEKSFP L FPPLPERGDF+L +VL SPYFFN
Sbjct: 985 SFEKSFPELKFPPLPERGDFDLTDVLGSPYFFN 1017
>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
Length = 983
Score = 1314 bits (3400), Expect = 0.0
Identities = 649/933 (69%), Positives = 752/933 (80%), Gaps = 27/933 (2%)
Frame = +2
Query: 503 SRSFTSIAEAVSSTDADEDTSTIEEM-RNDNS----------------GGGGKHKDDGIV 631
S S AE+VSS + DE I E+ R D S G GKH + +
Sbjct: 51 SSSAAVAAESVSSEEVDELHHAIGEIARGDPSVSAPAPAAGQEGHRRRSGRGKHSAEAMA 110
Query: 632 TEVKMNQQFQK---------SPRMIAGMISGKYLSLHRRQVKIETEAWEQAAKEYKELLM 784
+ ++ + G+ KY L RRQ++IETEAWEQAA+EY+ELL
Sbjct: 111 VPAAGQEGHRRRSGRGKHSAEAMAVHGVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLA 170
Query: 785 DMCEQKLAPNLPFIKSLLLDWFEPFRDAIAAEQEICKKNNSKSSHAPFFNLLPADMMAVI 964
DMC+QKLAPNLP++KSL L WFEP RD I AEQE+ + +++SHA +FN+LPADMMAVI
Sbjct: 171 DMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGARASHARYFNMLPADMMAVI 230
Query: 965 TMHKLMGLVMTNTGHGSVHLVHAACQIGDAIEQEVRIHRFLEXXXXXXXXXXXSEEVEGD 1144
TMHKLMGL+MT +G GSV ++ AACQIG+AIE EVRIH+FLE +EE GD
Sbjct: 231 TMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGD 290
Query: 1145 S-VMEDQTFLRKKVTTLMKKQKIRQLNMIVKRQDDSKPWGQAAQAMVGSRLIELLMNTAY 1321
S + ++Q LRKKVT LMKKQKIRQ+ IVK+QD+SKPWGQ A A VGSRLIEL++ TAY
Sbjct: 291 SDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAY 350
Query: 1322 VQPPVSQSADAPPDIRPAFRHTRSTAGKEPKKLTRRYGVIECDPVILQRLDKTARHMVIP 1501
+QPP SQSAD PPDIRPAF H T +E +K +RRYGVI+CDP++ Q LD+TA+HMVIP
Sbjct: 351 IQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIP 410
Query: 1502 YVPMLVPPINWTGFDKGAHLYLRSYVMRTHGARQQKQAIKKAPRKTMQTVFEALNTLGNT 1681
Y+PML+PPI+WTG+DKGAHL+L SYVMRTHGARQQ+ A+++APR+ MQ+VFEALNTLG+T
Sbjct: 411 YMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGST 470
Query: 1682 KWRVNKSVLSVVERIWSSGGRLADLVDREDIPLPEKPNTEDEAEIRXXXXXXXXXXXENS 1861
KWRVNK VLS+V+RIWSSGGRLADLVDR D+ LPEKP+TEDE +++ ENS
Sbjct: 471 KWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENS 530
Query: 1862 ERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAE 2041
ERHSQRCDVELKLAVARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAE
Sbjct: 531 ERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAE 590
Query: 2042 GRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRLAFTENHLEDIIDSADRPLEGRRWWLGA 2221
GRPLGKSGL WLKIHLANLYAGGVDKLSYDGR+AFTENHLEDI DSADRPLEG+RWWLGA
Sbjct: 591 GRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGA 650
Query: 2222 EDPFQCLAVCINLAEAVRSSSPNATVSHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVS 2401
EDPFQCLAVCINL EA+RS SP +SHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLV+
Sbjct: 651 EDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVA 710
Query: 2402 GDKPADVYSEIAARVRDIMQRDAEEDPAENPNALRARLLVNQVDRKLVKQTVMTSVYGVT 2581
G+KPADVY+ IA RV +IM+ DA +DPA +P+A RARLL++QVDRKLVKQTVMTSVYGVT
Sbjct: 711 GEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVT 770
Query: 2582 YVGARDQIKKRLKERNLVADDAEIFSASCYAAKTTLTALGQMFESARKIMSWLGDCAKTI 2761
YVGAR+QIK+RLKER+++ DD+E+FSASCYAAK TLTALG+MF++AR IM+WLGDCAK I
Sbjct: 771 YVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVI 830
Query: 2762 ASQNHPVRWTTPLGLPVVQPYRALGXXXXXXXXXXXXXXXXXXKVMVKRQKTAFPPNFVH 2941
A +N PVRWTTPLGLPVVQPYR LG KVMVKRQ+TAFPPNFVH
Sbjct: 831 ACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVH 890
Query: 2942 SLDGSHMMLTALACKKAGLAFAGVHDSYWTHACDVDQLNRILREKFVELYETPILENLLE 3121
SLDGSHMM+TA+ACK+ GL FAGVHDSYWTHACDVD +N+ILREKFVELY+TPILENLLE
Sbjct: 891 SLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLE 950
Query: 3122 SFEKSFPGLCFPPLPERGDFNLNEVLDSPYFFN 3220
SFEKSFP L FPPLPERGDF+L +VL SPYFFN
Sbjct: 951 SFEKSFPELKFPPLPERGDFDLTDVLGSPYFFN 983
>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 1311 bits (3392), Expect = 0.0
Identities = 653/1023 (63%), Positives = 781/1023 (76%), Gaps = 37/1023 (3%)
Frame = +2
Query: 263 MWRGIARTACRSSRNFRFSGDRPAEFPTFSCFLGSSTNSILCKENTIFDSS--------L 418
MWR +A+ +SR S P SST+ I +E++ D + +
Sbjct: 1 MWRNLAKQV--ASRKTNLSSQSHFGSP-------SSTSMIFSQESSFLDKARHFEARKCI 51
Query: 419 AARLLDVRFRRKGQAGVSVWE--------------VTGLHTNSRSFTSIAEAVSSTDADE 556
R+L + FR+ G E ++G ++ + S+AEA++STD +E
Sbjct: 52 NNRILVMGFRQVGDMASQKEELGRCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEE 111
Query: 557 DTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRMIAGMISGKYLSLHRRQVKIE 736
D+S EE++ + +D I + F++ R++ GM GKY L +RQ+K+E
Sbjct: 112 DSSGSEEIQ--------EMLEDLIRENNMVESHFKQPKRVVVGMGVGKYNLLRKRQIKLE 163
Query: 737 TEAWEQAAKEYKELLMDMCEQKLAPNLPFIKSLLLDWFEPFRDAIAAEQEICKKNNSKSS 916
TEAW++AAKEY+ELL DMCEQKLAPNLP+IKSL L WFEP RDAIAA+Q+ CK+ NS+ S
Sbjct: 164 TEAWQEAAKEYQELLADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQS 223
Query: 917 HAPFFNLLPADMMAVITMHKLMGLVMTNTGH-GSVHLVHAACQIGDAIEQEVRIHRFLEX 1093
HAP+F+ LPAD MAVITMHKLMGL+MTN G GSV +V AAC IG+AIE EVRIHRFLE
Sbjct: 224 HAPYFDHLPADKMAVITMHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEHEVRIHRFLEK 283
Query: 1094 XXXXXXXXXXSEEV--------------EGDSVMEDQTFLRKKVTTLMKKQKIRQLNMIV 1231
E E + + ++Q LRKKV L+K+QK++Q+ IV
Sbjct: 284 TKKKKNTIDKKAEADSVPVTIEQEKLADEQEKLTKEQERLRKKVNKLIKRQKMQQVRGIV 343
Query: 1232 KRQDDSKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADAPPDIRPAFRHTRSTAGKEP 1411
K Q+D KPWGQ A VG RLI+LLM+TAY+QPPV Q D PPDIRPAF H T ++
Sbjct: 344 KEQEDLKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDT 403
Query: 1412 KKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMRTH 1591
+K +RRYGVIECDP++ + ++KTARHMV+PY+PMLVPPINWTG+D+GA+L+L SYVMRTH
Sbjct: 404 QKTSRRYGVIECDPIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTH 463
Query: 1592 GARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDRED 1771
GA+QQ++ +K+ PRK ++ VFEAL+TLG+TKWRVNK VL V++RIW+SGGRLADLVDRED
Sbjct: 464 GAKQQREVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDRED 523
Query: 1772 IPLPEKPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHN 1951
+PLPE+P+TEDEAEIR ENSERHSQRCD+ELKLA +RKMKDEEGFYYPHN
Sbjct: 524 VPLPEEPDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHN 583
Query: 1952 LDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYD 2131
LDFRGRAYPMHPYLNHLGSD+CRG+LEF+EGR LGKSGL WLKIHLANLYAGGVDKLS+D
Sbjct: 584 LDFRGRAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFD 643
Query: 2132 GRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSHIP 2311
R AFTENH+++I DSADRPLEGRRWWLGAEDPFQCLA CINL EA+RS SP T+S++P
Sbjct: 644 DRAAFTENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMP 703
Query: 2312 VHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPAEN 2491
VHQDGSCNGLQHYAALGRDKLGA AVNLV GDKPADVYS IAARV DIM+ DAE+DPA N
Sbjct: 704 VHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATN 763
Query: 2492 PNALRARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKRLKERNLVADDAEIFSASCY 2671
PNAL ARLL+NQVDRKLVKQTVMTSVYGVTYVGARDQIK+RLKER +ADD +F+A+CY
Sbjct: 764 PNALHARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACY 823
Query: 2672 AAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTPLGLPVVQPYRALGXXXXX 2851
AA+TTLTALG+MFE+AR IMSWLG+CAK IAS+N PVRW TPLGLPVVQPYR LG
Sbjct: 824 AARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIK 883
Query: 2852 XXXXXXXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTALACKKAGLAFAGVHDSYWT 3031
KVMVKRQ+TAFPPNFVHSLDGSHMM+TA+ACKKAGL FAGVHDSYWT
Sbjct: 884 TSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWT 943
Query: 3032 HACDVDQLNRILREKFVELYETPILENLLESFEKSFPGLCFPPLPERGDFNLNEVLDSPY 3211
HACD+D++NRILREKFVELYE PILENLLE F++SFP L FPPLP+RGDF+L +VL+SPY
Sbjct: 944 HACDIDEMNRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLESPY 1003
Query: 3212 FFN 3220
FFN
Sbjct: 1004 FFN 1006
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 1303 bits (3373), Expect = 0.0
Identities = 663/1021 (64%), Positives = 778/1021 (76%), Gaps = 35/1021 (3%)
Frame = +2
Query: 263 MWRGIARTACRSSRNFRFSGDRPA-EFPTFSCFLGSSTN-SILCKENTIFDS-SLAARLL 433
MWR I++ A SR FR S D F +S G + LC+E+T + L+ +
Sbjct: 1 MWRYISKHAY--SRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTHPNLGLSQNSI 58
Query: 434 DVRFRRKGQAGVSVWEVT------GLHTNS-----------------------RSFTSIA 526
R RK + + E + GL NS RS+ S A
Sbjct: 59 FSRISRKVRHLEGICEESSKNPHLGLSQNSTFSSVKGDFRICGKRGSGSLGRLRSYGSAA 118
Query: 527 EAVSST---DADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRMIAGMISG 697
EA+ ST D DE IEEM +N +K N Q K P+ I GM G
Sbjct: 119 EAIVSTSEEDIDEIQELIEEMDKENEA-------------LKANLQ-PKQPKTIGGMGVG 164
Query: 698 KYLSLHRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPFIKSLLLDWFEPFRDAIAA 877
KY L RRQ+K+ETEAWE+AAKEY+ELLMDMCEQKLAPNLP++KSL L WFEP RDAIAA
Sbjct: 165 KYNFLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAA 224
Query: 878 EQEICKKNNSKSSHAPFFNLLPADMMAVITMHKLMGLVMTNTGHGSVHLVHAACQIGDAI 1057
EQ++C + ++ ++APFF+ LPA+MMAVITMHKLMGL+MT G GS +V AA IG+AI
Sbjct: 225 EQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAI 284
Query: 1058 EQEVRIHRFLEXXXXXXXXXXXSEEVEGDSVMEDQTFLRKKVTTLMKKQKIRQLNMIVKR 1237
E E RIHRFLE EE GD +M+++ LRKKV LMKKQK+RQ+ IVK+
Sbjct: 285 EHEARIHRFLEKTKKSNALSGDLEETPGD-MMKERERLRKKVKILMKKQKLRQVRKIVKQ 343
Query: 1238 QDDSKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADAPPDIRPAFRHTRSTAGKEPKK 1417
QDD KPWGQ VG RLI++LM TAY+QPP Q D PPDIRPAF HT T E K
Sbjct: 344 QDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV--ETMK 401
Query: 1418 LTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMRTHGA 1597
+RRYGVI+CDP++ + LDKTARHMVIPY+PMLVPP +W G+DKG +L+L SY+MRTHGA
Sbjct: 402 GSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGA 461
Query: 1598 RQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDREDIP 1777
+QQ++A+K+ P+K ++ VF+AL+TLGNTKWRVN+ VL +V+RIW+SGGRLADLVDRED+P
Sbjct: 462 KQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVP 521
Query: 1778 LPEKPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLD 1957
LPE P+TEDEAEIR EN ERHSQRCD+ELKLAVARKMKDE+GFYYPHNLD
Sbjct: 522 LPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLD 581
Query: 1958 FRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGR 2137
FRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLG SGL WLKIHLAN+Y GGVDKLSY+GR
Sbjct: 582 FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGR 641
Query: 2138 LAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSHIPVH 2317
+AF+ENHLEDI DSA+RPLEG+RWWLGAEDPFQCLA CIN+AEA+RS SP +S++P+H
Sbjct: 642 VAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIH 701
Query: 2318 QDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPAENPN 2497
QDGSCNGLQHYAALGRDKLGA AVNLV+GDKPADVYS IAARV DIM+RDA +DPA +PN
Sbjct: 702 QDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPN 761
Query: 2498 ALRARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKRLKERNLVADDAEIFSASCYAA 2677
+RARLL+NQVDRKLVKQTVMTSVYGVTY+GARDQIKKRLKER ++ DD E+F+A+CYAA
Sbjct: 762 VMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAA 821
Query: 2678 KTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTPLGLPVVQPYRALGXXXXXXX 2857
KTTLTALG+MFE+AR IMSWLGDCAK IA +NHPVRWTTPLGLPVVQPYR LG
Sbjct: 822 KTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTS 881
Query: 2858 XXXXXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTALACKKAGLAFAGVHDSYWTHA 3037
KVMVKRQ+TAFPPNFVHSLDGSHMM+TA+ACK++GL+FAGVHDSYWTHA
Sbjct: 882 LQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHA 941
Query: 3038 CDVDQLNRILREKFVELYETPILENLLESFEKSFPGLCFPPLPERGDFNLNEVLDSPYFF 3217
CDVDQ+N+ILREKFVELY+ PILENLLESF++SFP L FPPLPERGDF+L EVL+SPYFF
Sbjct: 942 CDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFF 1001
Query: 3218 N 3220
N
Sbjct: 1002 N 1002
>ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Brachypodium
distachyon]
Length = 992
Score = 1303 bits (3373), Expect = 0.0
Identities = 641/918 (69%), Positives = 746/918 (81%), Gaps = 1/918 (0%)
Frame = +2
Query: 470 SVWEVTGLHTNSRSFTSIAEAVSSTDADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMN 649
S+W + S S + E A E+ ++ N +G GK + +
Sbjct: 79 SLWGLQPPRLVSSSAAAAEEVDDLHHALEEIVPVDPKPNLPAGVAGKERKG----RSRSG 134
Query: 650 QQFQKSPRMIAGMISGKYLSLHRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPFIK 829
+ Q + GM S KY +L +RQV+IETEAWEQAAKEY+ELL DMCE KLAPNLP++K
Sbjct: 135 RGRQATEAAAHGMGSSKYAALRQRQVRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVK 194
Query: 830 SLLLDWFEPFRDAIAAEQEICKKNNSKSSHAPFFNLLPADMMAVITMHKLMGLVMTNTGH 1009
SL L WFEP RD I AEQE+ + +++SHAP+FN+LPADMMAVITMHKLMGL+MT +G
Sbjct: 195 SLFLGWFEPLRDQIIAEQELVGERGARASHAPYFNMLPADMMAVITMHKLMGLLMTGSGD 254
Query: 1010 GSVHLVHAACQIGDAIEQEVRIHRFLEXXXXXXXXXXXSEEVEGDS-VMEDQTFLRKKVT 1186
GSV ++ AACQIG+AIE EVRIH+FLE + GDS + ++Q LRKKVT
Sbjct: 255 GSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKNTKEVDNVVEAGDSDIAKEQQRLRKKVT 314
Query: 1187 TLMKKQKIRQLNMIVKRQDDSKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADAPPDI 1366
LMKKQKIRQ+ IVK+QD ++PWGQ A A VGSRLIELL+ TA++QPPVSQSAD+ PDI
Sbjct: 315 DLMKKQKIRQVRNIVKKQDSTRPWGQDAHAKVGSRLIELLIETAHIQPPVSQSADSTPDI 374
Query: 1367 RPAFRHTRSTAGKEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFD 1546
RPAF H T +E +K +RRYGVI+CDP+I Q LD+TA+HMVIPY+PML+PPI+WTG+D
Sbjct: 375 RPAFTHEMRTVTREQQKSSRRYGVIKCDPLIRQGLDRTAKHMVIPYMPMLIPPISWTGYD 434
Query: 1547 KGAHLYLRSYVMRTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERI 1726
KGAHL+L SYVMRTHGARQQ++A+KKAP++ MQ +FEAL+TLG+TKWR+NK VLS+V+RI
Sbjct: 435 KGAHLFLPSYVMRTHGARQQREAVKKAPKEQMQLIFEALDTLGSTKWRINKKVLSIVDRI 494
Query: 1727 WSSGGRLADLVDREDIPLPEKPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVELKLAV 1906
WSSGGRLADLVDR D+ LPEKP+TEDE E++ ENSERHSQRCDVELKLAV
Sbjct: 495 WSSGGRLADLVDRTDVALPEKPDTEDETELKKWRWNLRSVKKENSERHSQRCDVELKLAV 554
Query: 1907 ARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIH 2086
ARKMKDE GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEF+EGRPLG SGL WLKIH
Sbjct: 555 ARKMKDEVGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGDSGLCWLKIH 614
Query: 2087 LANLYAGGVDKLSYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAE 2266
LANLYAGGVDKLSYDGR+AFTENHLEDI DSA+RPLEG+RWWLGAEDPFQCLAVC++L E
Sbjct: 615 LANLYAGGVDKLSYDGRIAFTENHLEDIFDSANRPLEGKRWWLGAEDPFQCLAVCMDLTE 674
Query: 2267 AVRSSSPNATVSHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARV 2446
A+RSSSP A +SHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSG+KPADVYS IA RV
Sbjct: 675 ALRSSSPEAMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGEKPADVYSGIATRV 734
Query: 2447 RDIMQRDAEEDPAENPNALRARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKRLKER 2626
+IM+RDA++DPA +P+A RARLLV+QVDRKLVKQTVMTSVYGVTYVGAR+QIK+RLKER
Sbjct: 735 VEIMRRDAQKDPALDPDAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKER 794
Query: 2627 NLVADDAEIFSASCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTPLGL 2806
++ DD+E+F+ASCYAAK TLTALG+MFE+AR IM+WLGDCAK IA +N PVRW TPLGL
Sbjct: 795 GVIGDDSELFAASCYAAKVTLTALGEMFEAARSIMNWLGDCAKVIACENEPVRWMTPLGL 854
Query: 2807 PVVQPYRALGXXXXXXXXXXXXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTALACK 2986
PVVQPYR LG KVMVKRQ+TAFPPNFVHSLDGSHMM+TA+AC
Sbjct: 855 PVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACN 914
Query: 2987 KAGLAFAGVHDSYWTHACDVDQLNRILREKFVELYETPILENLLESFEKSFPGLCFPPLP 3166
K GL FAGVHDSYWTHACDVD +N+ILREKFVELY+ PILENLL+SFE SFP L FPPLP
Sbjct: 915 KQGLYFAGVHDSYWTHACDVDTMNKILREKFVELYDAPILENLLDSFETSFPTLRFPPLP 974
Query: 3167 ERGDFNLNEVLDSPYFFN 3220
ERGDF+LN+VL SPYFFN
Sbjct: 975 ERGDFDLNDVLQSPYFFN 992
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 1303 bits (3371), Expect = 0.0
Identities = 663/1021 (64%), Positives = 777/1021 (76%), Gaps = 35/1021 (3%)
Frame = +2
Query: 263 MWRGIARTACRSSRNFRFSGDRPA-EFPTFSCFLGSSTN-SILCKENTIFDS-SLAARLL 433
MWR I++ A SR FR S D F +S G + LC+E+T + L+ +
Sbjct: 1 MWRYISKHAY--SRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTHPNLGLSQNSI 58
Query: 434 DVRFRRKGQAGVSVWEVT------GLHTNS-----------------------RSFTSIA 526
R RK + + E + GL NS RS+ S A
Sbjct: 59 FSRISRKVRHLEGICEESSKNPHLGLSQNSTFSSVKGDFRICGKRGSGSLGRLRSYGSAA 118
Query: 527 EAVSST---DADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRMIAGMISG 697
EA+ ST D DE IEEM +N +K N Q K P+ I GM G
Sbjct: 119 EAIVSTSEEDIDEIQELIEEMDKENEA-------------LKANLQ-PKQPKTIGGMGVG 164
Query: 698 KYLSLHRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPFIKSLLLDWFEPFRDAIAA 877
KY L RRQ+K+ETEAWE+AAKEY+ELLMDMCEQKLAPNLP++KSL L WFEP RDAIAA
Sbjct: 165 KYNFLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAA 224
Query: 878 EQEICKKNNSKSSHAPFFNLLPADMMAVITMHKLMGLVMTNTGHGSVHLVHAACQIGDAI 1057
EQ++C + ++ ++APFF+ LPA+MMAVITMHKLMGL+MT G GS +V AA IG+AI
Sbjct: 225 EQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAI 284
Query: 1058 EQEVRIHRFLEXXXXXXXXXXXSEEVEGDSVMEDQTFLRKKVTTLMKKQKIRQLNMIVKR 1237
E E RIHRFLE EE GD +M+++ LRKKV LMKKQK+RQ+ IVK+
Sbjct: 285 EHEARIHRFLEKTKKSNALSGDLEETPGD-MMKERERLRKKVKILMKKQKLRQVRKIVKQ 343
Query: 1238 QDDSKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADAPPDIRPAFRHTRSTAGKEPKK 1417
QDD KPWGQ VG RLI++LM TAY+QPP Q D PPDIRPAF HT T E K
Sbjct: 344 QDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV--ETMK 401
Query: 1418 LTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMRTHGA 1597
+RRYGVI+CDP++ + LDKTARHMVIPY+PMLVPP +W G+DKG +L+L SY+MRTHGA
Sbjct: 402 GSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGA 461
Query: 1598 RQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDREDIP 1777
+QQ++A+K+ P+K ++ VF+AL+TLGNTKWRVN+ VL +V RIW+SGGRLADLVDRED+P
Sbjct: 462 KQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDREDVP 521
Query: 1778 LPEKPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLD 1957
LPE P+TEDEAEIR EN ERHSQRCD+ELKLAVARKMKDE+GFYYPHNLD
Sbjct: 522 LPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLD 581
Query: 1958 FRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGR 2137
FRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLG SGL WLKIHLAN+Y GGVDKLSY+GR
Sbjct: 582 FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGR 641
Query: 2138 LAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSHIPVH 2317
+AF+ENHLEDI DSA+RPLEG+RWWLGAEDPFQCLA CIN+AEA+RS SP +S++P+H
Sbjct: 642 VAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIH 701
Query: 2318 QDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPAENPN 2497
QDGSCNGLQHYAALGRDKLGA AVNLV+GDKPADVYS IAARV DIM+RDA +DPA +PN
Sbjct: 702 QDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPN 761
Query: 2498 ALRARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKRLKERNLVADDAEIFSASCYAA 2677
+RARLL+NQVDRKLVKQTVMTSVYGVTY+GARDQIKKRLKER ++ DD E+F+A+CYAA
Sbjct: 762 VMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAA 821
Query: 2678 KTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTPLGLPVVQPYRALGXXXXXXX 2857
KTTLTALG+MFE+AR IMSWLGDCAK IA +NHPVRWTTPLGLPVVQPYR LG
Sbjct: 822 KTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTS 881
Query: 2858 XXXXXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTALACKKAGLAFAGVHDSYWTHA 3037
KVMVKRQ+TAFPPNFVHSLDGSHMM+TA+ACK++GL+FAGVHDSYWTHA
Sbjct: 882 LQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHA 941
Query: 3038 CDVDQLNRILREKFVELYETPILENLLESFEKSFPGLCFPPLPERGDFNLNEVLDSPYFF 3217
CDVDQ+N+ILREKFVELY+ PILENLLESF++SFP L FPPLPERGDF+L EVL+SPYFF
Sbjct: 942 CDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFF 1001
Query: 3218 N 3220
N
Sbjct: 1002 N 1002
>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
X2 [Oryza brachyantha]
Length = 839
Score = 1300 bits (3363), Expect = 0.0
Identities = 625/838 (74%), Positives = 718/838 (85%), Gaps = 1/838 (0%)
Frame = +2
Query: 710 LHRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPFIKSLLLDWFEPFRDAIAAEQEI 889
L RRQV+IETEAWEQAAKEY+ELL DMCE KLAPNLP++KSL L WFEP RD I AEQ++
Sbjct: 2 LRRRQVQIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQDL 61
Query: 890 CKKNNSKSSHAPFFNLLPADMMAVITMHKLMGLVMTNTGHGSVHLVHAACQIGDAIEQEV 1069
+ +++SHA +FN+LPADMMAVITMHKLMGL+MT +G GSV ++ AACQIG+AIE EV
Sbjct: 62 VCERRARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEV 121
Query: 1070 RIHRFLEXXXXXXXXXXXSEEVEGDS-VMEDQTFLRKKVTTLMKKQKIRQLNMIVKRQDD 1246
R+H+FLE +EE G S + ++Q LRKKVT LMKK K+RQ+ IVK+QD+
Sbjct: 122 RLHKFLEKPKKKRSKEMDNEEEVGCSDIAKEQERLRKKVTDLMKKHKLRQVRYIVKKQDN 181
Query: 1247 SKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADAPPDIRPAFRHTRSTAGKEPKKLTR 1426
SKPWGQ A VGSRLIEL++ TAY+QPP SQSAD PPDIRPAF H T KE +K +R
Sbjct: 182 SKPWGQDVHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAKEQQKSSR 241
Query: 1427 RYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMRTHGARQQ 1606
RYGVI+CDP++ Q LD+TA+HMVIPY+PML+PPI+WTG+DKGAHL+L SYVMRTHGARQQ
Sbjct: 242 RYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQ 301
Query: 1607 KQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDREDIPLPE 1786
++A+K+APR+ MQ+VFEAL+TLG+TKWRVNK VLS+V+RIWSSGGRLADLVDR D+ LPE
Sbjct: 302 REAVKRAPREQMQSVFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRSDVALPE 361
Query: 1787 KPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRG 1966
KP+TEDEA+++ ENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRG
Sbjct: 362 KPDTEDEAKLKKWRWNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRG 421
Query: 1967 RAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRLAF 2146
RAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL WLKIHLANLYAGGVDKLSYDGR+AF
Sbjct: 422 RAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAF 481
Query: 2147 TENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSHIPVHQDG 2326
TENHLEDI DSADRPLEG+RWWLGAEDPFQCLAVCINL EA+RS SP +SHIPVHQDG
Sbjct: 482 TENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDG 541
Query: 2327 SCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPAENPNALR 2506
SCNGLQHYAALGRDKLGAIAVNLV+G+KPADVY+ IA RV +IM+ DA +DPA +P+A R
Sbjct: 542 SCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDPATDPDAAR 601
Query: 2507 ARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKRLKERNLVADDAEIFSASCYAAKTT 2686
AR+LV+QVDRKLVKQTVMTSVYGVTYVGAR+QIK+RLKER+++ DD+E+FSASCYAAK T
Sbjct: 602 ARMLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSASCYAAKVT 661
Query: 2687 LTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTPLGLPVVQPYRALGXXXXXXXXXX 2866
LTALG+MF++AR IM+WLGDCAK IA +N PV+WTTPLGLPVVQPYR LG
Sbjct: 662 LTALGEMFQAARSIMNWLGDCAKIIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTSLQV 721
Query: 2867 XXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTALACKKAGLAFAGVHDSYWTHACDV 3046
KVMVKRQ+TAFPPNFVHSLDGSHMM+TA+ACK+ GL FAGVHDSYWTHACDV
Sbjct: 722 LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDV 781
Query: 3047 DQLNRILREKFVELYETPILENLLESFEKSFPGLCFPPLPERGDFNLNEVLDSPYFFN 3220
D +N+ILREKFVELY+TPILENLL SFEKSFP L FPPLPERGDF+L +VL SPYFFN
Sbjct: 782 DTMNKILREKFVELYDTPILENLLGSFEKSFPELKFPPLPERGDFDLKDVLGSPYFFN 839
>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
AltName: Full=T7 bacteriophage-type single subunit RNA
polymerase 2; Flags: Precursor
gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 1298 bits (3358), Expect = 0.0
Identities = 654/1006 (65%), Positives = 780/1006 (77%), Gaps = 20/1006 (1%)
Frame = +2
Query: 263 MWRGIART-ACRSSRNFRFSGDRPAEFPTFSCFLGSSTNSILCKENTIFDSSLAARLLDV 439
MWR I + + R+ + FS T+S FLG +SI K+NT F S + ++
Sbjct: 35 MWRNIIKQLSSRTPQKLLFSSKNR----TYS-FLGFGQDSIF-KDNTKFRSLIPISCSNI 88
Query: 440 --RFRRKGQ---------AGVSVWEVTGLHTNSRSFTSIAEAV--SSTDADEDTSTIEEM 580
F+ G+ + +V +S+ S+AEAV SSTDA+ED S ++E+
Sbjct: 89 VMGFQNLGEYLPGDEFLSRPLIKNQVNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEV 148
Query: 581 RNDNSGGGGKHKDDGIVTEVKMNQQFQ------KSPRMIAGMISGKYLSLHRRQVKIETE 742
++TE+K ++ Q K + +GM KY +L RRQVK+ETE
Sbjct: 149 HE-------------LLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETE 195
Query: 743 AWEQAAKEYKELLMDMCEQKLAPNLPFIKSLLLDWFEPFRDAIAAEQEICKKNNSKSSHA 922
AWEQAAKEYKELL DMCEQKLAPNLP++KSL L WFEP RD IA EQE+C + SK+++A
Sbjct: 196 AWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYA 255
Query: 923 PFFNLLPADMMAVITMHKLMGLVMTNTGHGSVHLVHAACQIGDAIEQEVRIHRFLEXXXX 1102
+F LPADMMAVITMHKLMGL+MT HG+ +V AA IGDAIEQEVRIH FLE
Sbjct: 256 KYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKK 315
Query: 1103 XXXXXXXSEEVEGDSVMEDQTFLRKKVTTLMKKQKIRQLNMIVKRQDDSKPWGQAAQAMV 1282
+E +G+ V ++Q LRKKVT LMKKQK+R + IV+RQDDSKPWGQ A+A V
Sbjct: 316 QKAEKDKQKE-DGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKV 374
Query: 1283 GSRLIELLMNTAYVQPPVSQSADAPPDIRPAFRHTRSTAGKEPKKLTRRYGVIECDPVIL 1462
GSRLI+LL+ TAY+QPP +Q A PPDIRPAF H+ T KE K +RRYG+I+CD ++
Sbjct: 375 GSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKETKSASRRYGIIQCDELVF 434
Query: 1463 QRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMRTHGARQQKQAIKKAPRKTM 1642
+ L++TARHMVIPY+PMLVPP+ WTG+DKG HLYL SYVMRTHGARQQ++A+K+A R +
Sbjct: 435 KGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQL 494
Query: 1643 QTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDREDIPLPEKPNTEDEAEIRX 1822
Q VFEAL+TLGNTKWR+NK VLSVV+RIW+ GGRLADLVDR+D PLPE+P+TEDEA
Sbjct: 495 QPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTK 554
Query: 1823 XXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHL 2002
EN ERHSQRCD+ELKLAVARKMKDEE F+YPHN+DFRGRAYPMHP+LNHL
Sbjct: 555 WRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHL 614
Query: 2003 GSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRLAFTENHLEDIIDSA 2182
GSD+CRGVLEFAEGRPLG+SGL WLKIHLANL+AGGV+KLS +GR+ FTENH++DI DS+
Sbjct: 615 GSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSS 674
Query: 2183 DRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSHIPVHQDGSCNGLQHYAALG 2362
D+PLEGRRWWL AEDPFQCLAVCINL+EAVRSSSP +VSHIPVHQDGSCNGLQHYAALG
Sbjct: 675 DKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALG 734
Query: 2363 RDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPAENPNALRARLLVNQVDRKL 2542
RDKLGA AVNLV+G+KPADVYS IAARV DIM+RDA+ DPAE P+A+RAR+LVNQVDRKL
Sbjct: 735 RDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKL 794
Query: 2543 VKQTVMTSVYGVTYVGARDQIKKRLKERNLVADDAEIFSASCYAAKTTLTALGQMFESAR 2722
VKQTVMTSVYGVTY+GARDQIK+RLKER +ADD+E+F A+CYAAK TLTALG+MFE+AR
Sbjct: 795 VKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAAR 854
Query: 2723 KIMSWLGDCAKTIASQNHPVRWTTPLGLPVVQPYRALGXXXXXXXXXXXXXXXXXXKVMV 2902
IM+WLG+CAK IAS+N PVRWTTPLGLPVVQPYR +G KVMV
Sbjct: 855 SIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMV 914
Query: 2903 KRQKTAFPPNFVHSLDGSHMMLTALACKKAGLAFAGVHDSYWTHACDVDQLNRILREKFV 3082
KRQ+TAFPPNF+HSLDGSHMM+TA+AC++AGL FAGVHDSYWTHACDVD+LNRILREKFV
Sbjct: 915 KRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFV 974
Query: 3083 ELYETPILENLLESFEKSFPGLCFPPLPERGDFNLNEVLDSPYFFN 3220
ELYE PILE LLESF+ S+P L FPPLPERGDF++ +VL+SPYFFN
Sbjct: 975 ELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020
>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
RNA polymerase [Nicotiana tabacum]
Length = 1021
Score = 1295 bits (3352), Expect = 0.0
Identities = 632/913 (69%), Positives = 745/913 (81%), Gaps = 8/913 (0%)
Frame = +2
Query: 506 RSFTSIAEAV--SSTDADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQ------ 661
+S+ S+AEAV SSTDA+ED S ++E++ ++TE+K ++ Q
Sbjct: 123 KSYASVAEAVAVSSTDAEEDVSVVDEVQE-------------LLTELKKEEKKQFAFRRR 169
Query: 662 KSPRMIAGMISGKYLSLHRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPFIKSLLL 841
K + +GM KY +L RRQVK+ETEAWEQAAKEYKELL DMCEQKLAPNLP++KSL L
Sbjct: 170 KQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFL 229
Query: 842 DWFEPFRDAIAAEQEICKKNNSKSSHAPFFNLLPADMMAVITMHKLMGLVMTNTGHGSVH 1021
WFEP RD IA EQE+C + SK+++A + LPADMMAVITMHKLMGL+MT HG+
Sbjct: 230 GWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTAR 289
Query: 1022 LVHAACQIGDAIEQEVRIHRFLEXXXXXXXXXXXSEEVEGDSVMEDQTFLRKKVTTLMKK 1201
+V AA IGDAIEQEVRIH FLE +E +G+ V ++Q LRKKVT LMKK
Sbjct: 290 VVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKE-DGEHVTQEQEKLRKKVTNLMKK 348
Query: 1202 QKIRQLNMIVKRQDDSKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADAPPDIRPAFR 1381
QK+R + IV+RQDDSKPWGQ A+A VGSRLIELL+ TAY+QPP +Q A PPDIRPAF
Sbjct: 349 QKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFL 408
Query: 1382 HTRSTAGKEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHL 1561
H+ T KE K +RRYG+I+CD ++ + L++TARHMVIPY+PMLVPP+ WTG+DKG HL
Sbjct: 409 HSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHL 468
Query: 1562 YLRSYVMRTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGG 1741
YL SYVMRTHGARQQ++A+K+A R +Q VFEAL+TLG+TKWR+NK VLSV++RIW+ GG
Sbjct: 469 YLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVIDRIWAGGG 528
Query: 1742 RLADLVDREDIPLPEKPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVELKLAVARKMK 1921
RLADLVDR+D PLPE+P+TEDEA EN ERHSQRCD+ELKLAVARKMK
Sbjct: 529 RLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMK 588
Query: 1922 DEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLY 2101
DEEGF+YPHN+DFRGRAYPMHP+LNHLGSD+CRGVL FAEGRPLG+SGL WLKIHLANL+
Sbjct: 589 DEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGESGLRWLKIHLANLF 648
Query: 2102 AGGVDKLSYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSS 2281
AGGV+KLS +GR+AFTENH++DI DSAD+PLEGRRWWL AEDPFQCLAVCINL+EAVRSS
Sbjct: 649 AGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSS 708
Query: 2282 SPNATVSHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQ 2461
SP ++SHIPVHQDGSCNGLQHYAALGRD+LGA AVNLV+G+KPADVYS IAARV DIM+
Sbjct: 709 SPETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMK 768
Query: 2462 RDAEEDPAENPNALRARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKRLKERNLVAD 2641
RDA+ DPAE P+A+RAR LVNQVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKER +AD
Sbjct: 769 RDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIAD 828
Query: 2642 DAEIFSASCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTPLGLPVVQP 2821
D+E+F A+CYAAK TLTALG+MFE+AR IM+WLG+CAK IAS+N PVRWTTPLGLPVVQP
Sbjct: 829 DSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQP 888
Query: 2822 YRALGXXXXXXXXXXXXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTALACKKAGLA 3001
YR +G KVMVKRQ+TAFPPNF+HSLDGSHMM+TA+AC++AGL
Sbjct: 889 YRKIGRHLIKTSLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLN 948
Query: 3002 FAGVHDSYWTHACDVDQLNRILREKFVELYETPILENLLESFEKSFPGLCFPPLPERGDF 3181
FAGVHDSYWTHACDVD+LNRILREKFVELYETPILE LLESF+ S+P L FPPLPERGDF
Sbjct: 949 FAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDF 1008
Query: 3182 NLNEVLDSPYFFN 3220
+L +VL+SPYFFN
Sbjct: 1009 DLRDVLESPYFFN 1021
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 1295 bits (3351), Expect = 0.0
Identities = 656/1021 (64%), Positives = 779/1021 (76%), Gaps = 35/1021 (3%)
Frame = +2
Query: 263 MWRGIARTACRSSRNFRFSGDRPA-EFPTFSCFLGSSTN-SILCKENTIFDS-SLAARLL 433
MWR I++ A SR FR S D F +S G + LC+E+T + L+ +
Sbjct: 1 MWRYISKHAY--SRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNSI 58
Query: 434 DVRFRRKGQAGVSVWEVT------GLHTNS-----------------------RSFTSIA 526
R RK + + E + GL NS RS+ S A
Sbjct: 59 FSRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSAA 118
Query: 527 EAVSST---DADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRMIAGMISG 697
EA++ST D DE IEEM +N +K N Q K P+ I GM G
Sbjct: 119 EAIASTSEEDIDEIQELIEEMNKENEA-------------LKTNLQ-PKQPKTIGGMGVG 164
Query: 698 KYLSLHRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPFIKSLLLDWFEPFRDAIAA 877
KY L RRQ+K+ETEAWE+AAKEY+ELLMDMCEQKLAPNLP++KSL L WFEP RDAIAA
Sbjct: 165 KYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAA 224
Query: 878 EQEICKKNNSKSSHAPFFNLLPADMMAVITMHKLMGLVMTNTGHGSVHLVHAACQIGDAI 1057
EQ++C + ++ ++APFF+ LPA+MMAVITMHKLMGL+MT G GS +V AA IG+AI
Sbjct: 225 EQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAI 284
Query: 1058 EQEVRIHRFLEXXXXXXXXXXXSEEVEGDSVMEDQTFLRKKVTTLMKKQKIRQLNMIVKR 1237
E E RIHRFLE E+ GD +M+++ LRKKV LMKKQK++Q+ IVK+
Sbjct: 285 EHEARIHRFLEKTKKSNALSGDLEDTPGD-IMKERERLRKKVKILMKKQKLQQVRKIVKQ 343
Query: 1238 QDDSKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADAPPDIRPAFRHTRSTAGKEPKK 1417
QDD KPWGQ VG RLI++LM TAY+QPP Q D PPDIRPAF HT T E K
Sbjct: 344 QDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV--ETMK 401
Query: 1418 LTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMRTHGA 1597
+RRYGVI+CDP++ + LDKTARHMVIPY+PMLVPP +W G+DKGA+L+L SY+MRTHGA
Sbjct: 402 GSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGA 461
Query: 1598 RQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDREDIP 1777
+QQ++A+K+ P+K ++ VF+AL+TLGNTKWR+N+ VL +V+RIW+SGGRLADLVDRED+P
Sbjct: 462 KQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVP 521
Query: 1778 LPEKPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLD 1957
LPE+P+ EDEA+IR EN ERHSQRCD+ELKLAVARKMKDE+GFYYPHNLD
Sbjct: 522 LPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLD 581
Query: 1958 FRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGR 2137
FRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGL WLKIHLAN+Y GGVDKLSY+GR
Sbjct: 582 FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGR 641
Query: 2138 LAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSHIPVH 2317
+AF+ENH+EDI DSA+RPLEG+RWWLGAEDPFQCLA CIN+AEA+RS SP +S++P+H
Sbjct: 642 VAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIH 701
Query: 2318 QDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPAENPN 2497
QDGSCNGLQHYAALGRD LGA AVNLV+GDKPADVYS IAARV DIM+RDA +DPA +PN
Sbjct: 702 QDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPN 761
Query: 2498 ALRARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKRLKERNLVADDAEIFSASCYAA 2677
+RARLL+NQVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKER ++ DD E+F+A+CYAA
Sbjct: 762 VMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAA 821
Query: 2678 KTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTPLGLPVVQPYRALGXXXXXXX 2857
KTTLTALG+MFE+AR IMSWLGDCAK IA +NHPVRWTTPLGLPVVQPYR LG
Sbjct: 822 KTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTS 881
Query: 2858 XXXXXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTALACKKAGLAFAGVHDSYWTHA 3037
KVMVKRQ+TAFPPNFVHSLDGSHMM+TA+ACK++GL+FAGVHDSYWTHA
Sbjct: 882 LQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHA 941
Query: 3038 CDVDQLNRILREKFVELYETPILENLLESFEKSFPGLCFPPLPERGDFNLNEVLDSPYFF 3217
DVDQ+N+ILREKFVELY+ PILENLLESF++SFP L FPPLPERGDF+L EVL+SPYFF
Sbjct: 942 SDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFF 1001
Query: 3218 N 3220
N
Sbjct: 1002 N 1002
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
tuberosum]
Length = 993
Score = 1295 bits (3351), Expect = 0.0
Identities = 632/908 (69%), Positives = 739/908 (81%), Gaps = 3/908 (0%)
Frame = +2
Query: 506 RSFTSIAEAVSST---DADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRM 676
RS+ S AEA++ST D DE IEEM +N +K N Q K P+
Sbjct: 104 RSYGSAAEAIASTSEEDIDEIQELIEEMNKENEA-------------LKTNLQ-PKQPKT 149
Query: 677 IAGMISGKYLSLHRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPFIKSLLLDWFEP 856
+ GM GKY L RRQ+K+ETEAWE AAKEY+ELLMDMCEQKLAPNLP+IKSL L WFEP
Sbjct: 150 VGGMGIGKYNLLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEP 209
Query: 857 FRDAIAAEQEICKKNNSKSSHAPFFNLLPADMMAVITMHKLMGLVMTNTGHGSVHLVHAA 1036
RDAIAAEQ++C + ++ ++APFF+ LPA+MMAVITMHKLMGL+MT G GS +V AA
Sbjct: 210 LRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAA 269
Query: 1037 CQIGDAIEQEVRIHRFLEXXXXXXXXXXXSEEVEGDSVMEDQTFLRKKVTTLMKKQKIRQ 1216
IG+AIE E RIHRFLE EE GD +M+++ LRKKV LMKKQK++Q
Sbjct: 270 SHIGEAIEHEARIHRFLEKTKKNALDGSL-EETAGD-IMKERERLRKKVKILMKKQKLQQ 327
Query: 1217 LNMIVKRQDDSKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADAPPDIRPAFRHTRST 1396
+ IVK+QDD KPWGQ VG +LI++L+ TAY+QPP Q D PPDIRPAF HT T
Sbjct: 328 VRKIVKQQDDEKPWGQDNLVKVGCKLIQILIETAYIQPPNDQLDDCPPDIRPAFMHTLKT 387
Query: 1397 AGKEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSY 1576
E K +RRYGVI+CDP++ + LDKTARHMVIPY+PMLVPP NW+G+D+GA+L+L SY
Sbjct: 388 V--ETVKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSY 445
Query: 1577 VMRTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADL 1756
+MRTHGA+QQ++A+K+ P+K ++ VF+AL+TLGNTKWRVNK VL +++RIW+SGGRLADL
Sbjct: 446 IMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADL 505
Query: 1757 VDREDIPLPEKPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGF 1936
VDRED+PLPE+P+TEDE EI+ EN ERHSQRCD+ELKLAVARKMKDEEGF
Sbjct: 506 VDREDVPLPEEPDTEDEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGF 565
Query: 1937 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVD 2116
YYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEF+EGRPLGKSGL WLKIHLAN+Y GGVD
Sbjct: 566 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVD 625
Query: 2117 KLSYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNAT 2296
KLSY+GR AF+ENH+EDI DSADRPLEGRRWWLGAEDPFQCLA CIN++EA+RS SP +
Sbjct: 626 KLSYEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCINISEALRSPSPETS 685
Query: 2297 VSHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEE 2476
+SH+P+HQDGSCNGLQHYAALGRDKLGA AVNLV+GDKPADVYS IAARV DIM+RDA++
Sbjct: 686 ISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADK 745
Query: 2477 DPAENPNALRARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKRLKERNLVADDAEIF 2656
DPA +PN +RARLL+NQVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKER + DD E+F
Sbjct: 746 DPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELF 805
Query: 2657 SASCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTPLGLPVVQPYRALG 2836
SA+CYAAKTTLTALG+MFE+AR IMSWLGDCAK IA +N PVRWTTPLGLPVVQPYR LG
Sbjct: 806 SAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLG 865
Query: 2837 XXXXXXXXXXXXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTALACKKAGLAFAGVH 3016
KVMVKRQ+TAFPPNFVHSLDGSHMM+TA+ CK+AGL+FAGVH
Sbjct: 866 RHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAITCKEAGLSFAGVH 925
Query: 3017 DSYWTHACDVDQLNRILREKFVELYETPILENLLESFEKSFPGLCFPPLPERGDFNLNEV 3196
DSYWTHA DVDQ+N+ILREKFVELY+ PILENLLESF++SFP L FPPLPERGDF+L EV
Sbjct: 926 DSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREV 985
Query: 3197 LDSPYFFN 3220
L+SPYFFN
Sbjct: 986 LESPYFFN 993
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 1; Flags: Precursor
gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
subunit RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 1294 bits (3349), Expect = 0.0
Identities = 655/1021 (64%), Positives = 779/1021 (76%), Gaps = 35/1021 (3%)
Frame = +2
Query: 263 MWRGIARTACRSSRNFRFSGDRPA-EFPTFSCFLGSSTN-SILCKENTIFDS-SLAARLL 433
MWR I++ A SR FR S D F +S G + LC+E+T + L+ +
Sbjct: 1 MWRYISKQAY--SRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNSI 58
Query: 434 DVRFRRKGQAGVSVWEVT------GLHTNS-----------------------RSFTSIA 526
R RK + + E + GL NS RS+ S A
Sbjct: 59 FSRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSAA 118
Query: 527 EAVSST---DADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRMIAGMISG 697
EA++ST D DE IEEM +N +K N Q K P+ I GM G
Sbjct: 119 EAIASTSEEDIDEIQELIEEMNKENEA-------------LKTNLQ-PKQPKTIGGMGVG 164
Query: 698 KYLSLHRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPFIKSLLLDWFEPFRDAIAA 877
KY L RRQ+K+ETEAWE+AAKEY+ELLMDMCEQKLAPNLP++KSL L WFEP RDAIAA
Sbjct: 165 KYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAA 224
Query: 878 EQEICKKNNSKSSHAPFFNLLPADMMAVITMHKLMGLVMTNTGHGSVHLVHAACQIGDAI 1057
EQ++C + ++ ++APFF+ LPA+MMAVITMHKLMGL+MT G GS +V AA IG+AI
Sbjct: 225 EQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAI 284
Query: 1058 EQEVRIHRFLEXXXXXXXXXXXSEEVEGDSVMEDQTFLRKKVTTLMKKQKIRQLNMIVKR 1237
E E RIHRFLE E+ GD +M+++ +RKKV LMKKQK++Q+ IVK+
Sbjct: 285 EHEARIHRFLEKTKKSNALSGDLEDTPGD-IMKERERVRKKVKILMKKQKLQQVRKIVKQ 343
Query: 1238 QDDSKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADAPPDIRPAFRHTRSTAGKEPKK 1417
QDD KPWGQ VG RLI++LM TAY+QPP Q D PPDIRPAF HT T E K
Sbjct: 344 QDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV--ETMK 401
Query: 1418 LTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMRTHGA 1597
+RRYGVI+CDP++ + LDKTARHMVIPY+PMLVPP +W G+DKGA+L+L SY+MRTHGA
Sbjct: 402 GSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGA 461
Query: 1598 RQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDREDIP 1777
+QQ++A+K+ P+K ++ VF+AL+TLGNTKWR+N+ VL +V+RIW+SGGRLADLVDRED+P
Sbjct: 462 KQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVP 521
Query: 1778 LPEKPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLD 1957
LPE+P+ EDEA+IR EN ERHSQRCD+ELKLAVARKMKDE+GFYYPHNLD
Sbjct: 522 LPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLD 581
Query: 1958 FRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGR 2137
FRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGL WLKIHLAN+Y GGVDKLSY+GR
Sbjct: 582 FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGR 641
Query: 2138 LAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSHIPVH 2317
+AF+ENH+EDI DSA+RPLEG+RWWLGAEDPFQCLA CIN+AEA+RS SP +S++P+H
Sbjct: 642 VAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIH 701
Query: 2318 QDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPAENPN 2497
QDGSCNGLQHYAALGRD LGA AVNLV+GDKPADVYS IAARV DIM+RDA +DPA +PN
Sbjct: 702 QDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPN 761
Query: 2498 ALRARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKRLKERNLVADDAEIFSASCYAA 2677
+RARLL+NQVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKER ++ DD E+F+A+CYAA
Sbjct: 762 VMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAA 821
Query: 2678 KTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTPLGLPVVQPYRALGXXXXXXX 2857
KTTLTALG+MFE+AR IMSWLGDCAK IA +NHPVRWTTPLGLPVVQPYR LG
Sbjct: 822 KTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTS 881
Query: 2858 XXXXXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTALACKKAGLAFAGVHDSYWTHA 3037
KVMVKRQ+TAFPPNFVHSLDGSHMM+TA+ACK++GL+FAGVHDSYWTHA
Sbjct: 882 LQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHA 941
Query: 3038 CDVDQLNRILREKFVELYETPILENLLESFEKSFPGLCFPPLPERGDFNLNEVLDSPYFF 3217
DVDQ+N+ILREKFVELY+ PILENLLESF++SFP L FPPLPERGDF+L EVL+SPYFF
Sbjct: 942 SDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFF 1001
Query: 3218 N 3220
N
Sbjct: 1002 N 1002
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 1293 bits (3347), Expect = 0.0
Identities = 651/1006 (64%), Positives = 779/1006 (77%), Gaps = 20/1006 (1%)
Frame = +2
Query: 263 MWRGIART-ACRSSRNFRFSGDRPAEFPTFSCFLGSSTNSILCKENTIFDSSLAARLLDV 439
MWR I + + R+ + FS T+S FLG +SI K+NT F S + ++
Sbjct: 35 MWRNIIKQLSSRTPQKLLFSSKNR----TYS-FLGFGQDSIF-KDNTKFRSLIPISCSNI 88
Query: 440 --RFRRKGQ---------AGVSVWEVTGLHTNSRSFTSIAEAV--SSTDADEDTSTIEEM 580
F+ G+ + +V +S+ S+AEAV SSTDA+ED S ++E+
Sbjct: 89 VMGFQNLGEYLPGDEFLSRPLIKNQVNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEV 148
Query: 581 RNDNSGGGGKHKDDGIVTEVKMNQQFQ------KSPRMIAGMISGKYLSLHRRQVKIETE 742
++TE+K ++ Q K + +GM KY +L RRQVK+ETE
Sbjct: 149 HE-------------LLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETE 195
Query: 743 AWEQAAKEYKELLMDMCEQKLAPNLPFIKSLLLDWFEPFRDAIAAEQEICKKNNSKSSHA 922
AWEQAAKEYKELL DMCEQKLAPNLP++KSL L WFEP RD IA EQE+C + SK+++A
Sbjct: 196 AWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYA 255
Query: 923 PFFNLLPADMMAVITMHKLMGLVMTNTGHGSVHLVHAACQIGDAIEQEVRIHRFLEXXXX 1102
+F LPADMMAVITMHKLMGL+MT HG+ +V AA IGDAIEQEVRIH FLE
Sbjct: 256 KYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKK 315
Query: 1103 XXXXXXXSEEVEGDSVMEDQTFLRKKVTTLMKKQKIRQLNMIVKRQDDSKPWGQAAQAMV 1282
+E +G+ V ++Q LRKKVT LMKKQK+R + IV+RQDDSKPWGQ A+A V
Sbjct: 316 QKAEKDKQKE-DGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKV 374
Query: 1283 GSRLIELLMNTAYVQPPVSQSADAPPDIRPAFRHTRSTAGKEPKKLTRRYGVIECDPVIL 1462
GSRLI+LL+ TAY+QPP +Q A PPDI PAF H+ T KE K +RRYG+I+CD ++
Sbjct: 375 GSRLIDLLLQTAYIQPPANQLAVDPPDIPPAFVHSVRTVAKETKSASRRYGIIQCDELVF 434
Query: 1463 QRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMRTHGARQQKQAIKKAPRKTM 1642
+ L++TARHMVIPY+PMLVPP+ WTG+DKG HLYL SYVMRTHGARQQ++A+K+A R +
Sbjct: 435 KGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQL 494
Query: 1643 QTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDREDIPLPEKPNTEDEAEIRX 1822
Q VFEAL+TLGNTKWR+NK VLSVV+RIW+ GGRLADLVDR+D PLPE+P+TEDEA +
Sbjct: 495 QPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALLPK 554
Query: 1823 XXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHL 2002
EN ERHSQRCD+ELKLAVARKMKDEE F+YPHN+DFRGRAYPMHP+LNHL
Sbjct: 555 WRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHL 614
Query: 2003 GSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRLAFTENHLEDIIDSA 2182
GSD+CRGVLEFAEGRPLG+SGL WLKIHLANL+AGGV+KLS +GR+ FTENH++DI DS+
Sbjct: 615 GSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSS 674
Query: 2183 DRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSHIPVHQDGSCNGLQHYAALG 2362
D+PLEGRRWWL AEDPFQCLAVCINL+EAVRSSSP +VSHIPVHQDGSCNGLQHYAALG
Sbjct: 675 DKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALG 734
Query: 2363 RDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPAENPNALRARLLVNQVDRKL 2542
RDKLGA AVNLV+G+KPA+ YS IAARV DIM+RDA+ DPAE P+A+RAR+LVNQVDRKL
Sbjct: 735 RDKLGAAAVNLVAGEKPAEAYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKL 794
Query: 2543 VKQTVMTSVYGVTYVGARDQIKKRLKERNLVADDAEIFSASCYAAKTTLTALGQMFESAR 2722
VKQTVMTSVYGVTY+GARDQIK+RLKER +ADD+E+F A+CYAAK TLTALG+MFE+AR
Sbjct: 795 VKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAAR 854
Query: 2723 KIMSWLGDCAKTIASQNHPVRWTTPLGLPVVQPYRALGXXXXXXXXXXXXXXXXXXKVMV 2902
IM+WLG+CAK IAS+N PVRWTTPLGLPVVQPYR +G KVMV
Sbjct: 855 SIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMV 914
Query: 2903 KRQKTAFPPNFVHSLDGSHMMLTALACKKAGLAFAGVHDSYWTHACDVDQLNRILREKFV 3082
KRQ+TAFPPNF+HSLDGSHMM+TA+AC++AGL FAGVHDSYWTHACDVD+LNRILREKFV
Sbjct: 915 KRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFV 974
Query: 3083 ELYETPILENLLESFEKSFPGLCFPPLPERGDFNLNEVLDSPYFFN 3220
ELYE PILE LLESF+ S+P L FPPLPERGDF++ +VL+SPYFFN
Sbjct: 975 ELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 1291 bits (3340), Expect = 0.0
Identities = 636/914 (69%), Positives = 732/914 (80%), Gaps = 9/914 (0%)
Frame = +2
Query: 506 RSFTSIAEAVSSTDADEDTSTIEE-------MRNDNSGGGGKHKDDGIVTEVKMNQQFQK 664
R + ++AEAVSSTD +ED S +EE M+ + GGG+++
Sbjct: 130 RGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEQQSGGGRNRR--------------- 174
Query: 665 SPRMIAGMISGKYLSLHRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPFIKSLLLD 844
R+ GM SGKY L RQVKIETEAWE+AA EY+ELLMDMCEQKLAPNLP++KSL L
Sbjct: 175 --RVARGMGSGKYRMLKMRQVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLG 232
Query: 845 WFEPFRDAIAAEQEICKKNNSKSSHAPFFNLLPADMMAVITMHKLMGLVMTNTGHGSVHL 1024
WFEP RDAIA EQE C+ K ++AP+F+ LPADMMAVITMHKLMGL+MT HG +
Sbjct: 233 WFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARV 292
Query: 1025 VHAACQIGDAIEQEVRIHRFLEXXXXXXXXXXXSEEV--EGDSVMEDQTFLRKKVTTLMK 1198
V AAC IGDAIEQEVRIH+FLE +E E ++V +Q LRKKVT L+K
Sbjct: 293 VQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIK 352
Query: 1199 KQKIRQLNMIVKRQDDSKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADAPPDIRPAF 1378
KQK+ + IVK QDD KPWGQ A+A VGSR+IELL TAY+Q P Q ADAPPDI PAF
Sbjct: 353 KQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLADAPPDIFPAF 412
Query: 1379 RHTRSTAGKEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAH 1558
H T KE K +++YGVIEC+P++L+ L++TARHMVIPY+PMLVPP+ WTG+DKGAH
Sbjct: 413 THALRTVSKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAH 472
Query: 1559 LYLRSYVMRTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSG 1738
+L SYVMRTHGA+QQ+ +K+ P+K ++ VFEAL+TLGNTKWRVN VLSV++RIWS G
Sbjct: 473 FFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCG 532
Query: 1739 GRLADLVDREDIPLPEKPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVELKLAVARKM 1918
GRLADLVDR D+PLPEKP TEDEA++R EN ERHSQRCD+ELKL+VARKM
Sbjct: 533 GRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVARKM 592
Query: 1919 KDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANL 2098
KDEEGFYYPHN+DFRGRAYPMHPYLNHLGSDLCRG+LEFAEGR LGKSGLHWLKIHLANL
Sbjct: 593 KDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANL 652
Query: 2099 YAGGVDKLSYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRS 2278
YAGGVDKLS++GRLAFTENHL+DI DSAD+PLEGRRWWL AEDPFQCLAVCINL EA+RS
Sbjct: 653 YAGGVDKLSHEGRLAFTENHLDDIFDSADKPLEGRRWWLKAEDPFQCLAVCINLTEALRS 712
Query: 2279 SSPNATVSHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIM 2458
SSP +SHIPVHQDGSCNGLQHYAALGRD LGA AVNLV+ +KPADVYS IAARV I+
Sbjct: 713 SSPETFISHIPVHQDGSCNGLQHYAALGRDTLGAAAVNLVAREKPADVYSGIAARVLVII 772
Query: 2459 QRDAEEDPAENPNALRARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKRLKERNLVA 2638
QRDA+ DPA P+ALRA+LL++QVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKER
Sbjct: 773 QRDAQRDPAVFPDALRAKLLLSQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAPM 832
Query: 2639 DDAEIFSASCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTPLGLPVVQ 2818
++AE+F ASCYAAK TLTALG+MF++AR IMSWLG+CAK IAS+N PVRWTTPLGLPVVQ
Sbjct: 833 EEAELFGASCYAAKVTLTALGEMFQAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQ 892
Query: 2819 PYRALGXXXXXXXXXXXXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTALACKKAGL 2998
PYR LG KVMVKRQ+TAFPPNFVHSLDGSHMM+TA+AC+KAGL
Sbjct: 893 PYRKLGRHTVKTSLQILTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGL 952
Query: 2999 AFAGVHDSYWTHACDVDQLNRILREKFVELYETPILENLLESFEKSFPGLCFPPLPERGD 3178
FAGVHDSYWTHACDVD++NRILREKFVELYE PILENLL+SF+KSFP L FPPLPERGD
Sbjct: 953 TFAGVHDSYWTHACDVDEMNRILREKFVELYEMPILENLLDSFQKSFPKLVFPPLPERGD 1012
Query: 3179 FNLNEVLDSPYFFN 3220
F+L EVL SPYFFN
Sbjct: 1013 FDLREVLGSPYFFN 1026
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 1290 bits (3339), Expect = 0.0
Identities = 654/1021 (64%), Positives = 777/1021 (76%), Gaps = 35/1021 (3%)
Frame = +2
Query: 263 MWRGIARTACRSSRNFRFSGDRPA-EFPTFSCFLGSSTN-SILCKENTIFDS-SLAARLL 433
MWR I++ A SR FR S D F +S G + LC+E+T + L+ +
Sbjct: 1 MWRYISKQAY--SRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNSI 58
Query: 434 DVRFRRKGQAGVSVWEVT------GLHTNS-----------------------RSFTSIA 526
R RK + + E + GL NS RS+ S A
Sbjct: 59 FSRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSAA 118
Query: 527 EAVSST---DADEDTSTIEEMRNDNSGGGGKHKDDGIVTEVKMNQQFQKSPRMIAGMISG 697
EA++ST D DE IEEM +N +K N Q K P+ I GM G
Sbjct: 119 EAIASTSEEDTDEIQELIEEMNKENEA-------------LKTNLQ-PKQPKTIGGMGVG 164
Query: 698 KYLSLHRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPFIKSLLLDWFEPFRDAIAA 877
KY L RRQ+K+ETEAWE+AAKEY+ELLMDMCEQKLAPNLP++KSL L WFEP RDAIAA
Sbjct: 165 KYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAA 224
Query: 878 EQEICKKNNSKSSHAPFFNLLPADMMAVITMHKLMGLVMTNTGHGSVHLVHAACQIGDAI 1057
EQ++C + ++ + APFF+ LPA+MMAVITMHKLMG +MT G GS +V AA IG+AI
Sbjct: 225 EQKLCDEGKNRGACAPFFDQLPAEMMAVITMHKLMGWLMTGGGTGSARVVQAASHIGEAI 284
Query: 1058 EQEVRIHRFLEXXXXXXXXXXXSEEVEGDSVMEDQTFLRKKVTTLMKKQKIRQLNMIVKR 1237
E E RIHRFLE E+ GD +M+++ +RKKV LMKKQK++Q+ IVK+
Sbjct: 285 EHEARIHRFLEKTKKSNALSGDLEDTPGD-IMKERERVRKKVKILMKKQKLQQVRKIVKQ 343
Query: 1238 QDDSKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADAPPDIRPAFRHTRSTAGKEPKK 1417
QDD KPWGQ VG RLI++LM TAY+QPP Q D PPDIRPAF HT T E K
Sbjct: 344 QDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV--ETMK 401
Query: 1418 LTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMRTHGA 1597
+RRYGVI+CDP++ + LDKTARHMVIPY+PMLVPP +W G+DKGA+L+L SY+MRTHGA
Sbjct: 402 GSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGA 461
Query: 1598 RQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDREDIP 1777
+QQ++A+K+ P+K ++ VF+AL+TLGNTKWR+N+ VL +V+RIW+SGGRLADLVDRED+P
Sbjct: 462 KQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVP 521
Query: 1778 LPEKPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLD 1957
LPE+P+ EDEA+IR EN ERHSQRCD+ELKLAVARKMKDE+GFYYPHNLD
Sbjct: 522 LPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLD 581
Query: 1958 FRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGR 2137
FRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGL WLKIHLAN+Y GGVDKLSY+GR
Sbjct: 582 FRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGR 641
Query: 2138 LAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSHIPVH 2317
+AF+ENH+EDI DSA+RPLEG+RWWLGAEDPFQCLA CIN+AEA+RS SP +S++P+H
Sbjct: 642 VAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIH 701
Query: 2318 QDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPAENPN 2497
QDGSCNGLQHYAALGRD LGA AVNLV+GDKPADVYS IAARV DIM+RDA +DPA +PN
Sbjct: 702 QDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPN 761
Query: 2498 ALRARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKRLKERNLVADDAEIFSASCYAA 2677
+RARLL+NQVDRKLVKQTVMTSVYGVTY+GARDQIK+RLKER ++ DD E+F+A+CYAA
Sbjct: 762 VMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAA 821
Query: 2678 KTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTPLGLPVVQPYRALGXXXXXXX 2857
KTTLTALG+MFE+AR IMSWLGDCAK IA +NHPVRWTTPLGLPVVQPYR LG
Sbjct: 822 KTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTS 881
Query: 2858 XXXXXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTALACKKAGLAFAGVHDSYWTHA 3037
KVMVKRQ+TAFPPNFVHSLDGSHMM+TA+ACK++GL+FAGVHDSYWTHA
Sbjct: 882 LQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHA 941
Query: 3038 CDVDQLNRILREKFVELYETPILENLLESFEKSFPGLCFPPLPERGDFNLNEVLDSPYFF 3217
DVDQ+N+ILREKFVELY+ PILENLLESF++SFP L FPPLPERGDF+L EVL+SPYFF
Sbjct: 942 SDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFF 1001
Query: 3218 N 3220
N
Sbjct: 1002 N 1002
>tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays]
Length = 975
Score = 1289 bits (3335), Expect = 0.0
Identities = 636/922 (68%), Positives = 745/922 (80%), Gaps = 18/922 (1%)
Frame = +2
Query: 509 SFTSIAEAVSSTDADEDTSTIEEM---------------RNDNSGGGGKHKDDGIVTEVK 643
S ++ AEAVSS DA+E IEE+ ++ G H+ + +
Sbjct: 59 SSSAAAEAVSSEDAEELHHAIEEIVRAQPSPNLPQPQAVAEEHQAPGRDHR-----SRHR 113
Query: 644 MNQQFQKSPRMIA--GMISGKYLSLHRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNL 817
+ + + + + A GM +Y SL RRQ++IETEAWEQAA EY+ELL DMCEQKLAPNL
Sbjct: 114 RSGRGRHAEVLAAEHGMTYHRYTSLRRRQIRIETEAWEQAANEYRELLADMCEQKLAPNL 173
Query: 818 PFIKSLLLDWFEPFRDAIAAEQEICKKNNSKSSHAPFFNLLPADMMAVITMHKLMGLVMT 997
P++KSL L WFEP RD IA EQE+ S++SH PFF++LPADMMAVITMHKLMGL+MT
Sbjct: 174 PYVKSLFLGWFEPLRDQIATEQELVADPGSRASHGPFFSMLPADMMAVITMHKLMGLLMT 233
Query: 998 NTGHGSVHLVHAACQIGDAIEQEVRIHRFLEXXXXXXXXXXXSEEVEGDS-VMEDQTFLR 1174
+G GSV ++ AACQIG+AIE EVRI+RFLE +EE GD+ + +Q LR
Sbjct: 234 GSGDGSVRVIQAACQIGEAIEHEVRINRFLEKTRKKNNKEMENEEEAGDTNIAIEQQRLR 293
Query: 1175 KKVTTLMKKQKIRQLNMIVKRQDDSKPWGQAAQAMVGSRLIELLMNTAYVQPPVSQSADA 1354
KKVT LMKKQK+RQ+ IVK QD S+PWGQ A A VGSRLI+L + TA++QPP SQS+D
Sbjct: 294 KKVTDLMKKQKLRQVRNIVKNQDKSRPWGQDAHAKVGSRLIDLFIGTAHIQPPASQSSDG 353
Query: 1355 PPDIRPAFRHTRSTAGKEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINW 1534
PDIRPAFRH T KE +K +RRYGVI+CDP++ Q LD+TA+HMVIPY+PML+PPI W
Sbjct: 354 LPDIRPAFRHEMRTMVKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICW 413
Query: 1535 TGFDKGAHLYLRSYVMRTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSV 1714
TG+DKGAHL+L SYVMRTHGARQQ+ A+K+APR+ MQ VFEALNTLG+TKWRVNK VLS+
Sbjct: 414 TGYDKGAHLFLPSYVMRTHGARQQRDAVKRAPREQMQFVFEALNTLGSTKWRVNKRVLSI 473
Query: 1715 VERIWSSGGRLADLVDREDIPLPEKPNTEDEAEIRXXXXXXXXXXXENSERHSQRCDVEL 1894
V+RIWS+GGRLADLVDR D+P+PEKP+TEDE ++ +NSERHSQRCDVEL
Sbjct: 474 VDRIWSNGGRLADLVDRTDVPVPEKPDTEDETLLKNWKWHLRAAKKKNSERHSQRCDVEL 533
Query: 1895 KLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHW 2074
KLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL W
Sbjct: 534 KLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRW 593
Query: 2075 LKIHLANLYAGGVDKLSYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCI 2254
LKIHLANLYA GVDKLSYDGR+AF ENHLE+I DSADRPLEGRRWWLGAEDPFQCLAVC+
Sbjct: 594 LKIHLANLYAAGVDKLSYDGRIAFAENHLEEIFDSADRPLEGRRWWLGAEDPFQCLAVCM 653
Query: 2255 NLAEAVRSSSPNATVSHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEI 2434
NL EA+RSSSP T+SHIPVHQDGSCNGLQHYAALG+DKLGAIAVNLV+G+KPADVY+ I
Sbjct: 654 NLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGKDKLGAIAVNLVAGEKPADVYTGI 713
Query: 2435 AARVRDIMQRDAEEDPAENPNALRARLLVNQVDRKLVKQTVMTSVYGVTYVGARDQIKKR 2614
A RV +IM+ DA++DP+ P+A RARL+V+QVDRKLVKQTVMTSVYGVTY+GAR+QI++R
Sbjct: 714 ANRVMEIMRMDAQKDPSVEPDAARARLIVDQVDRKLVKQTVMTSVYGVTYIGAREQIRRR 773
Query: 2615 LKERNLVADDAEIFSASCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTT 2794
LKER ++ +D+E+F ASCYAAK TLTALG+MF++AR IM+WLGDCAK IA +N PVRWTT
Sbjct: 774 LKERGVIPNDSELFGASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTT 833
Query: 2795 PLGLPVVQPYRALGXXXXXXXXXXXXXXXXXXKVMVKRQKTAFPPNFVHSLDGSHMMLTA 2974
PLGLPVVQPYR LG KVMVKRQ+TAFPPNFVHSLDGSHMM+TA
Sbjct: 834 PLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTA 893
Query: 2975 LACKKAGLAFAGVHDSYWTHACDVDQLNRILREKFVELYETPILENLLESFEKSFPGLCF 3154
+ACK+ GL FAGVHDSYWTHA DVD +N+ILREKFVELY+TPILENLLESFEKSFP L F
Sbjct: 894 VACKRQGLNFAGVHDSYWTHASDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKF 953
Query: 3155 PPLPERGDFNLNEVLDSPYFFN 3220
PPLPERGDF++ EVL+S YFFN
Sbjct: 954 PPLPERGDFDMKEVLESTYFFN 975