BLASTX nr result
ID: Zingiber23_contig00016474
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00016474
(347 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin... 82 7e-14
ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 81 2e-13
ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu... 75 1e-11
emb|CAN71488.1| hypothetical protein VITISV_005339 [Vitis vinifera] 75 1e-11
ref|XP_002320490.1| ZINC FINGER protein 2 [Populus trichocarpa] ... 67 2e-09
gb|EOX93354.1| Zinc finger C-x8-C-x5-C-x3-H type family protein ... 67 2e-09
ref|XP_002302855.1| ZINC FINGER protein 2 [Populus trichocarpa] ... 66 5e-09
emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera] 66 5e-09
ref|XP_006829499.1| hypothetical protein AMTR_s00074p00110430 [A... 65 9e-09
ref|XP_006447662.1| hypothetical protein CICLE_v10015215mg [Citr... 59 5e-07
gb|EXC25517.1| Zinc finger CCCH domain-containing protein 3 [Mor... 59 9e-07
gb|EMJ16552.1| hypothetical protein PRUPE_ppa005469mg [Prunus pe... 59 9e-07
gb|ABR16973.1| unknown [Picea sitchensis] 59 9e-07
ref|XP_004304076.1| PREDICTED: zinc finger CCCH domain-containin... 56 6e-06
>ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
vinifera] gi|297739220|emb|CBI28871.3| unnamed protein
product [Vitis vinifera]
Length = 450
Score = 82.0 bits (201), Expect = 7e-14
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYXXXXXXXXXXXX-IGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP + G P TG A+G +GG+ W L + PY+ PRMQ Y+P
Sbjct: 161 QPASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLPRAPYIPGPRMQGPQTYMP 220
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNMLAPNQISNSMHQEQSGS 323
+VL +QG + QGW+TYMG+M+ I S +L N + NS +Q +SGS
Sbjct: 221 IVLSPSQGIVPA-QGWNTYMGNMSPISSTGILGSNLVYNSRNQSESGS 267
>ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 3-like [Vitis vinifera]
Length = 324
Score = 80.9 bits (198), Expect = 2e-13
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 6/120 (5%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYXXXXXXXXXXXX-IGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP + G P+TGS A+G +GGI W L + PYM PRMQ Y+P
Sbjct: 99 QPASIGTVLPVTGSVAFGSTGISITPSSGLSYVGGIPAWLLPRAPYMPGPRMQGPQTYMP 158
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNMLAPNQISNSMHQEQSGS-----ILPLELP 344
+VL +QG + QGW+TYMG+M+ I S ++L N + N+ + +S S +L L +P
Sbjct: 159 IVLSPSQGIIPA-QGWNTYMGNMSPISSTSILGSNLVYNTKNPSESSSNGQVHLLSLSIP 217
>ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
gi|223531614|gb|EEF33442.1| zinc finger protein,
putative [Ricinus communis]
Length = 456
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYG-YXXXXXXXXXXXXIGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP G P TG A G +GG+ W L + PY+S PR+Q Y+P
Sbjct: 168 QPAPLGTGLPFTGPAASGPMASSNLPSSGLPYVGGLPTWSLPRAPYVSGPRLQGPQTYMP 227
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNMLAPNQISNSMHQEQSGS 323
VL +QG +A QGW+TY+G+++ + S ++L + + NS +Q +SGS
Sbjct: 228 AVLSPSQGVVAA-QGWNTYVGNLSPMSSGSVLGSSIVYNSRNQSESGS 274
>emb|CAN71488.1| hypothetical protein VITISV_005339 [Vitis vinifera]
Length = 232
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYXXXXXXXXXXXX-IGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP + G P+T A+G +GGI W L + P M P MQ Y+P
Sbjct: 103 QPASIGTVLPITSPAAFGSTGVSITPSSGLPYVGGIPAWSLPRAPCMPGPHMQGPQTYMP 162
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNMLAPNQISNSMHQEQSGS 323
++ ++QG + Q GW+TYMG+M+ I S ++L N + N+ +Q +SGS
Sbjct: 163 IIFSSSQGIVPAQ-GWNTYMGNMSPISSTSILGSNLVYNTKNQGESGS 209
>ref|XP_002320490.1| ZINC FINGER protein 2 [Populus trichocarpa]
gi|222861263|gb|EEE98805.1| ZINC FINGER protein 2
[Populus trichocarpa]
Length = 446
Score = 67.4 bits (163), Expect = 2e-09
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYXXXXXXXXXXXX-IGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP + G +F LTG+ A+G +GG+ W L + P MS +Q AY+P
Sbjct: 163 QPASLGTSFSLTGAAAFGSTGSPIVPSSGLPYVGGLPTWSLPRAPLMSGTNLQGPQAYMP 222
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNMLAPNQISNSMHQEQSGS 323
+V+ + G + GW+TY+G++N + S ++L N+ +S +Q SGS
Sbjct: 223 VVVSPSPGIIP-VPGWNTYVGNLNPMSSSSILGSNRAYDSRNQGDSGS 269
>gb|EOX93354.1| Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 1
[Theobroma cacao]
Length = 438
Score = 67.0 bits (162), Expect = 2e-09
Identities = 31/75 (41%), Positives = 47/75 (62%)
Frame = +3
Query: 99 GGISPWPLSKVPYMSSPRMQALPAYVPLVLPTTQGTMAGQQGWSTYMGSMNHIYSPNMLA 278
GG+ W L + PY+S PR+Q +Y+P+V+ +Q + GWSTYMG+M+ + S +L
Sbjct: 189 GGLPTWSLPRAPYVSGPRLQGPQSYMPVVVSPSQSIIPAH-GWSTYMGNMSSVSSTGILG 247
Query: 279 PNQISNSMHQEQSGS 323
N NSM+ +SGS
Sbjct: 248 SNFAYNSMNPAESGS 262
>ref|XP_002302855.1| ZINC FINGER protein 2 [Populus trichocarpa]
gi|222844581|gb|EEE82128.1| ZINC FINGER protein 2
[Populus trichocarpa]
Length = 450
Score = 65.9 bits (159), Expect = 5e-09
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYXXXXXXXXXXXX-IGGISPWPLSKVP-YMSSPRMQALPAYV 176
QP + G + PLTG+ A+G +GG+ W L + P YMS +Q AY+
Sbjct: 163 QPASLGTSLPLTGAAAFGSTGSPIVPSSGLPYVGGLPTWSLPRAPPYMSGTHLQGPQAYM 222
Query: 177 PLVLPTTQGTMAGQQGWSTYMGSMNHIYSPNMLAPNQISNSMHQEQSGS 323
P+V+ +QG + GW+TY+G+ N + S ++L N+ +S + SGS
Sbjct: 223 PVVVSPSQGIVP-VPGWNTYVGNSNPMSSSSILGSNRAYDSRNHGDSGS 270
>emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]
Length = 460
Score = 65.9 bits (159), Expect = 5e-09
Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 32/139 (23%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYXXXXXXXXXXXX-IGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP + G P TG A+G +GG+ W L + PY+ PRMQ Y+P
Sbjct: 140 QPASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLPRAPYIPGPRMQGPQTYMP 199
Query: 180 LVLPTTQGTMAGQQGWSTYM-------------------------------GSMNHIYSP 266
+VL +QG + QGW+TYM G+M+ I S
Sbjct: 200 IVLSPSQGIVPA-QGWNTYMPHFLVLMKSFHVVNLVYSIDPNEFVICEIPRGNMSPISST 258
Query: 267 NMLAPNQISNSMHQEQSGS 323
+L N + NS +Q +SGS
Sbjct: 259 GILGSNLVYNSRNQSESGS 277
>ref|XP_006829499.1| hypothetical protein AMTR_s00074p00110430 [Amborella trichopoda]
gi|548834983|gb|ERM96915.1| hypothetical protein
AMTR_s00074p00110430 [Amborella trichopoda]
Length = 276
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYXXXXXXXXXXXX--IGGISPWPLSKVPYMSSPRMQALPAYV 176
QP +TGS YG +GG+S W L + PY+SSPR+Q P Y+
Sbjct: 188 QPAALSPVLAVTGSSGYGSAGSSLSLPSGPPPYVGGLSAWTLPRGPYVSSPRLQGSPTYM 247
Query: 177 PLVLPTTQGTMAGQQGWSTY 236
P++L +QG ++ QGWS+Y
Sbjct: 248 PIILSPSQGMISSPQGWSSY 267
>ref|XP_006447662.1| hypothetical protein CICLE_v10015215mg [Citrus clementina]
gi|568830635|ref|XP_006469597.1| PREDICTED: zinc finger
CCCH domain-containing protein 3-like [Citrus sinensis]
gi|557550273|gb|ESR60902.1| hypothetical protein
CICLE_v10015215mg [Citrus clementina]
Length = 451
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYXXXXXXXXXXXXIGGISP-WPLSKVPYMSSPRMQALPAYVP 179
QP + G PLTG+ + G G P W L + PY+SS R+Q +Y+P
Sbjct: 161 QPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGSLPTWSLQRAPYLSS-RLQGTQSYMP 219
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNMLAPNQISNSMHQEQSGS 323
L++ +QG + GW+TYMG++ + ++ N I +S +Q G+
Sbjct: 220 LIVSPSQGIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGA 266
>gb|EXC25517.1| Zinc finger CCCH domain-containing protein 3 [Morus notabilis]
Length = 439
Score = 58.5 bits (140), Expect = 9e-07
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYXXXXXXXXXXXXI-GGISPWPLSKVPYMSSPRMQALPAYVP 179
QP + G FP PA+G GG+ W +VPY+ P+ Q P YVP
Sbjct: 161 QPASLGTVFPAP-PPAFGSAGSAVLPSSNLPYAGGLPAWSFPRVPYVPGPQPQQQP-YVP 218
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNMLAPNQISNSMHQEQSGS 323
+V+ +QG ++ GW+TY+G+++ + S ++ N + N + +SGS
Sbjct: 219 VVISPSQGIISAG-GWNTYVGNVSPVPSTGIVGSNLVYNPRNPVESGS 265
>gb|EMJ16552.1| hypothetical protein PRUPE_ppa005469mg [Prunus persica]
Length = 459
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/75 (37%), Positives = 47/75 (62%)
Frame = +3
Query: 99 GGISPWPLSKVPYMSSPRMQALPAYVPLVLPTTQGTMAGQQGWSTYMGSMNHIYSPNMLA 278
GG+S W + PY+S PR+Q+ +Y+P+VLP QG + GW+TY+G+++ + S +L
Sbjct: 215 GGLSAWSFPRAPYLSGPRLQSPHSYMPVVLP-PQGIVPA-HGWNTYVGNISPVTSTGILG 272
Query: 279 PNQISNSMHQEQSGS 323
N NS + +S +
Sbjct: 273 SNLTYNSRTRGESAA 287
>gb|ABR16973.1| unknown [Picea sitchensis]
Length = 504
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 21 ATFPLTGSPAYGYXXXXXXXXXXXXI-GGISPWPLSKVPYMSSPRMQALPAYVPLVLPTT 197
A P +GSP Y G++ W L + PY+S P +Q P Y+P++L
Sbjct: 208 ALLPDSGSPVYAAAELSLSPASGSTYPAGLASWSLQRAPYVSGPCLQGSPTYMPVILSPQ 267
Query: 198 QGTMAGQQGWSTYMGSMNHIYSP 266
Q T + Q GWSTY G ++ + SP
Sbjct: 268 QSTPSVQPGWSTYHGPISPLSSP 290
>ref|XP_004304076.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Fragaria vesca subsp. vesca]
Length = 437
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 99 GGISPWPLSKVPYMSSPRMQALPAYVP-LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNML 275
GG+S W + PY++ PR+ Y+P +VL QG + GW+TY+G+++ + S ++L
Sbjct: 189 GGLSAWSFPRAPYVAGPRIATPQPYMPAVVLSPPQGVLPAH-GWNTYVGNLSPVSSTSIL 247
Query: 276 APNQISNSMHQEQSGSILPLELP 344
N NS Q +S S + LP
Sbjct: 248 GSNLTYNSRGQGESASNGQVHLP 270