BLASTX nr result
ID: Zingiber23_contig00016473
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00016473
(347 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin... 98 1e-18
ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 90 3e-16
ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu... 88 1e-15
emb|CAN71488.1| hypothetical protein VITISV_005339 [Vitis vinifera] 87 2e-15
ref|XP_002320490.1| ZINC FINGER protein 2 [Populus trichocarpa] ... 86 4e-15
ref|XP_002302855.1| ZINC FINGER protein 2 [Populus trichocarpa] ... 86 4e-15
gb|EOX93354.1| Zinc finger C-x8-C-x5-C-x3-H type family protein ... 82 6e-14
emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera] 82 7e-14
ref|XP_006829499.1| hypothetical protein AMTR_s00074p00110430 [A... 76 5e-12
gb|EXC25517.1| Zinc finger CCCH domain-containing protein 3 [Mor... 73 4e-11
gb|EMJ16552.1| hypothetical protein PRUPE_ppa005469mg [Prunus pe... 72 8e-11
ref|XP_004304076.1| PREDICTED: zinc finger CCCH domain-containin... 71 1e-10
ref|XP_006447662.1| hypothetical protein CICLE_v10015215mg [Citr... 70 3e-10
gb|ABR16973.1| unknown [Picea sitchensis] 68 1e-09
gb|ABR16930.1| unknown [Picea sitchensis] 64 3e-08
ref|XP_003519444.1| PREDICTED: zinc finger CCCH domain-containin... 61 1e-07
gb|ESW13655.1| hypothetical protein PHAVU_008G214600g [Phaseolus... 60 3e-07
gb|ESW13654.1| hypothetical protein PHAVU_008G214600g [Phaseolus... 60 3e-07
ref|XP_006595836.1| PREDICTED: zinc finger CCCH domain-containin... 58 1e-06
gb|EOX93355.1| Zinc finger C-x8-C-x5-C-x3-H type family protein ... 58 1e-06
>ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
vinifera] gi|297739220|emb|CBI28871.3| unnamed protein
product [Vitis vinifera]
Length = 450
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYS-SPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP + G P TG A+G + S I+P+S P +GG+ W L + PY+ PRMQ Y+P
Sbjct: 161 QPASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLPRAPYIPGPRMQGPQTYMP 220
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQSGSS 326
+VL +QG + QGW+TYMG+M+ I S +L N + NS +Q +SGSS
Sbjct: 221 IVLSPSQGIVPA-QGWNTYMGNMSPISSTGILGSNLVYNSRNQSESGSS 268
>ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 3-like [Vitis vinifera]
Length = 324
Score = 90.1 bits (222), Expect = 3e-16
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYSS-PIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP + G P+TGS A+G + I P+S +GGI W L + PYM PRMQ Y+P
Sbjct: 99 QPASIGTVLPVTGSVAFGSTGISITPSSGLSYVGGIPAWLLPRAPYMPGPRMQGPQTYMP 158
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQSGSS 326
+VL +QG + QGW+TYMG+M+ I S ++L N + N+ + +S S+
Sbjct: 159 IVLSPSQGIIPA-QGWNTYMGNMSPISSTSILGSNLVYNTKNPSESSSN 206
>ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
gi|223531614|gb|EEF33442.1| zinc finger protein,
putative [Ricinus communis]
Length = 456
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/109 (40%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYG-YSSPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP G P TG A G +S +P+S P +GG+ W L + PY+S PR+Q Y+P
Sbjct: 168 QPAPLGTGLPFTGPAASGPMASSNLPSSGLPYVGGLPTWSLPRAPYVSGPRLQGPQTYMP 227
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQSGSS 326
VL +QG +A QGW+TY+G+++ + S ++L + + NS +Q +SGSS
Sbjct: 228 AVLSPSQGVVAA-QGWNTYVGNLSPMSSGSVLGSSIVYNSRNQSESGSS 275
>emb|CAN71488.1| hypothetical protein VITISV_005339 [Vitis vinifera]
Length = 232
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYSS-PIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP + G P+T A+G + I P+S P +GGI W L + P M P MQ Y+P
Sbjct: 103 QPASIGTVLPITSPAAFGSTGVSITPSSGLPYVGGIPAWSLPRAPCMPGPHMQGPQTYMP 162
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQSGS 323
++ ++QG + QGW+TYMG+M+ I S ++L N + N+ +Q +SGS
Sbjct: 163 IIFSSSQGIVPA-QGWNTYMGNMSPISSTSILGSNLVYNTKNQGESGS 209
>ref|XP_002320490.1| ZINC FINGER protein 2 [Populus trichocarpa]
gi|222861263|gb|EEE98805.1| ZINC FINGER protein 2
[Populus trichocarpa]
Length = 446
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/108 (39%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYS-SPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP + G +F LTG+ A+G + SPIVP+S P +GG+ W L + P MS +Q AY+P
Sbjct: 163 QPASLGTSFSLTGAAAFGSTGSPIVPSSGLPYVGGLPTWSLPRAPLMSGTNLQGPQAYMP 222
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQSGS 323
+V+ + G + GW+TY+G++N + S ++L N+ +S +Q SGS
Sbjct: 223 VVVSPSPGIIP-VPGWNTYVGNLNPMSSSSILGSNRAYDSRNQGDSGS 269
>ref|XP_002302855.1| ZINC FINGER protein 2 [Populus trichocarpa]
gi|222844581|gb|EEE82128.1| ZINC FINGER protein 2
[Populus trichocarpa]
Length = 450
Score = 86.3 bits (212), Expect = 4e-15
Identities = 45/110 (40%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYS-SPIVPTSASPVIGGISPWPLSKVP-YMSSPRMQALPAYV 176
QP + G + PLTG+ A+G + SPIVP+S P +GG+ W L + P YMS +Q AY+
Sbjct: 163 QPASLGTSLPLTGAAAFGSTGSPIVPSSGLPYVGGLPTWSLPRAPPYMSGTHLQGPQAYM 222
Query: 177 PLVLPTTQGTMAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQSGSS 326
P+V+ +QG + GW+TY+G+ N + S ++L N+ +S + SGSS
Sbjct: 223 PVVVSPSQGIVP-VPGWNTYVGNSNPMSSSSILGSNRAYDSRNHGDSGSS 271
>gb|EOX93354.1| Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 1
[Theobroma cacao]
Length = 438
Score = 82.4 bits (202), Expect = 6e-14
Identities = 43/108 (39%), Positives = 62/108 (57%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYSSPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVPL 182
QP + A P+ G SS I+P S P GG+ W L + PY+S PR+Q +Y+P+
Sbjct: 161 QPPSASAGLPVNGP----VSSSILPPSGVPYAGGLPTWSLPRAPYVSGPRLQGPQSYMPV 216
Query: 183 VLPTTQGTMAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQSGSS 326
V+ +Q + GWSTYMG+M+ + S +L N NSM+ +SGSS
Sbjct: 217 VVSPSQSIIPA-HGWSTYMGNMSSVSSTGILGSNFAYNSMNPAESGSS 263
>emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]
Length = 460
Score = 82.0 bits (201), Expect = 7e-14
Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 32/140 (22%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYS-SPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP + G P TG A+G + S I+P+S P +GG+ W L + PY+ PRMQ Y+P
Sbjct: 140 QPASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLPRAPYIPGPRMQGPQTYMP 199
Query: 180 LVLPTTQGTMAGQQGWSTYM-------------------------------GSMNHIYSP 266
+VL +QG + QGW+TYM G+M+ I S
Sbjct: 200 IVLSPSQGIVPA-QGWNTYMPHFLVLMKSFHVVNLVYSIDPNEFVICEIPRGNMSPISST 258
Query: 267 NLLAPNQISNSMHQEQSGSS 326
+L N + NS +Q +SGSS
Sbjct: 259 GILGSNLVYNSRNQSESGSS 278
>ref|XP_006829499.1| hypothetical protein AMTR_s00074p00110430 [Amborella trichopoda]
gi|548834983|gb|ERM96915.1| hypothetical protein
AMTR_s00074p00110430 [Amborella trichopoda]
Length = 276
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGY--SSPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYV 176
QP +TGS YG SS +P+ P +GG+S W L + PY+SSPR+Q P Y+
Sbjct: 188 QPAALSPVLAVTGSSGYGSAGSSLSLPSGPPPYVGGLSAWTLPRGPYVSSPRLQGSPTYM 247
Query: 177 PLVLPTTQGTMAGQQGWSTY 236
P++L +QG ++ QGWS+Y
Sbjct: 248 PIILSPSQGMISSPQGWSSY 267
>gb|EXC25517.1| Zinc finger CCCH domain-containing protein 3 [Morus notabilis]
Length = 439
Score = 72.8 bits (177), Expect = 4e-11
Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYS-SPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP + G FP PA+G + S ++P+S P GG+ W +VPY+ P+ Q P YVP
Sbjct: 161 QPASLGTVFPAP-PPAFGSAGSAVLPSSNLPYAGGLPAWSFPRVPYVPGPQPQQQP-YVP 218
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQSGSSLPLEL 341
+V+ +QG ++ GW+TY+G+++ + S ++ N + N + +SGS+ + L
Sbjct: 219 VVISPSQGIISA-GGWNTYVGNVSPVPSTGIVGSNLVYNPRNPVESGSAGQMHL 271
>gb|EMJ16552.1| hypothetical protein PRUPE_ppa005469mg [Prunus persica]
Length = 459
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/108 (34%), Positives = 62/108 (57%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYSSPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVPL 182
QP + G P G+ S ++P+S P GG+S W + PY+S PR+Q+ +Y+P+
Sbjct: 187 QPQSLGTVLPAFGAAG----STVLPSSGLPYAGGLSAWSFPRAPYLSGPRLQSPHSYMPV 242
Query: 183 VLPTTQGTMAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQSGSS 326
VLP QG + GW+TY+G+++ + S +L N NS + +S ++
Sbjct: 243 VLP-PQGIVPA-HGWNTYVGNISPVTSTGILGSNLTYNSRTRGESAAN 288
>ref|XP_004304076.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Fragaria vesca subsp. vesca]
Length = 437
Score = 71.2 bits (173), Expect = 1e-10
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Frame = +3
Query: 36 TGSPAYGYS-SPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVP-LVLPTTQGTM 209
T PA+G + S +VP+S P GG+S W + PY++ PR+ Y+P +VL QG +
Sbjct: 167 TALPAFGSTGSSVVPSSGVPYTGGLSAWSFPRAPYVAGPRIATPQPYMPAVVLSPPQGVL 226
Query: 210 AGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQSGSSLPLELP 344
GW+TY+G+++ + S ++L N NS Q +S S+ + LP
Sbjct: 227 PAH-GWNTYVGNLSPVSSTSILGSNLTYNSRGQGESASNGQVHLP 270
>ref|XP_006447662.1| hypothetical protein CICLE_v10015215mg [Citrus clementina]
gi|568830635|ref|XP_006469597.1| PREDICTED: zinc finger
CCCH domain-containing protein 3-like [Citrus sinensis]
gi|557550273|gb|ESR60902.1| hypothetical protein
CICLE_v10015215mg [Citrus clementina]
Length = 451
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYG-YSSPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP + G PLTG+ + G S ++P+S G + W L + PY+SS R+Q +Y+P
Sbjct: 161 QPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGSLPTWSLQRAPYLSS-RLQGTQSYMP 219
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQSGSSLPLEL 341
L++ +QG + GW+TYMG++ + ++ N I +S +Q G+ + +
Sbjct: 220 LIVSPSQGIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHI 272
>gb|ABR16973.1| unknown [Picea sitchensis]
Length = 504
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Frame = +3
Query: 21 ATFPLTGSPAYGYSS-PIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVPLVLPTT 197
A P +GSP Y + + P S S G++ W L + PY+S P +Q P Y+P++L
Sbjct: 208 ALLPDSGSPVYAAAELSLSPASGSTYPAGLASWSLQRAPYVSGPCLQGSPTYMPVILSPQ 267
Query: 198 QGTMAGQQGWSTYMGSMNHIYSP---NLLAPNQISNSMHQEQSGSS 326
Q T + Q GWSTY G ++ + SP L + +S + S SS
Sbjct: 268 QSTPSVQPGWSTYHGPISPLSSPEGKRQLGTGTVYSSSYMTGSSSS 313
>gb|ABR16930.1| unknown [Picea sitchensis]
Length = 554
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYG-YSSPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVP 179
QP G P++GSP Y PI P SA+ G+ WP + PY SP M Y+P
Sbjct: 192 QPAALGTLVPVSGSPLYATIRPPIAPASATQYSPGLPTWPSPRTPYRQSPHMPGALPYMP 251
Query: 180 LVLPTTQGTMAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQSGSSL 329
++ QG +A GW TY + + SP + N M+ + L
Sbjct: 252 VMYSPHQGMLAA-SGWGTYQSPASPLTSPESQQQLRRMNIMYNSTQPNGL 300
>ref|XP_003519444.1| PREDICTED: zinc finger CCCH domain-containing protein 3 isoformX1
[Glycine max]
Length = 415
Score = 61.2 bits (147), Expect = 1e-07
Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYSSPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVPL 182
Q + GA +PL GSP +S I+PTS P GG W S VP MS Q L +YVP
Sbjct: 158 QHASLGA-YPLAGSPTP--TSTIIPTSGLPYAGGFPAW--SAVPRMSYLSGQGLQSYVPP 212
Query: 183 VLPTTQGTMAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQS---GSSLPLELP 344
L ++QG + Q W+ YMG+MN L N + + M+ +S G ++ LP
Sbjct: 213 FLSSSQGVIP-VQSWNNYMGNMNPAMPNGFLGSNLVYDYMNLGESLFGGQAINSALP 268
>gb|ESW13655.1| hypothetical protein PHAVU_008G214600g [Phaseolus vulgaris]
Length = 420
Score = 60.1 bits (144), Expect = 3e-07
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYSSPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVPL 182
Q + GA +PL GSP S+ I+PTS P GG W S VP MS Q + +YVP
Sbjct: 160 QHASLGA-YPLAGSPT---STTIIPTSGLPYAGGFPAW--SAVPRMSYLSGQGVQSYVPP 213
Query: 183 VLPTTQGTMAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQS---GSSLPLELP 344
L ++Q + Q W+ YMGSMN L N + + M+ +S G ++ LP
Sbjct: 214 FLSSSQSIIP-MQSWNNYMGSMNPTMPTGYLGSNLVYDFMNLGESLFGGQAINSALP 269
>gb|ESW13654.1| hypothetical protein PHAVU_008G214600g [Phaseolus vulgaris]
Length = 421
Score = 60.1 bits (144), Expect = 3e-07
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYSSPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVPL 182
Q + GA +PL GSP S+ I+PTS P GG W S VP MS Q + +YVP
Sbjct: 161 QHASLGA-YPLAGSPT---STTIIPTSGLPYAGGFPAW--SAVPRMSYLSGQGVQSYVPP 214
Query: 183 VLPTTQGTMAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMHQEQS---GSSLPLELP 344
L ++Q + Q W+ YMGSMN L N + + M+ +S G ++ LP
Sbjct: 215 FLSSSQSIIP-MQSWNNYMGSMNPTMPTGYLGSNLVYDFMNLGESLFGGQAINSALP 270
>ref|XP_006595836.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
isoform X3 [Glycine max]
Length = 416
Score = 57.8 bits (138), Expect = 1e-06
Identities = 36/93 (38%), Positives = 48/93 (51%)
Frame = +3
Query: 27 FPLTGSPAYGYSSPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVPLVLPTTQGT 206
+PL G P +S I+PTS GG W S VP MS Q L +YVP LP++QG
Sbjct: 164 YPLAGGPPTP-TSTIIPTSGLSYAGGFPAW--SAVPRMSYLSGQGLQSYVPPFLPSSQGV 220
Query: 207 MAGQQGWSTYMGSMNHIYSPNLLAPNQISNSMH 305
+ Q W+ YMG+MN L N + + M+
Sbjct: 221 IP-VQSWNNYMGNMNPAMPNGFLGSNLVYDYMN 252
>gb|EOX93355.1| Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 2
[Theobroma cacao]
Length = 338
Score = 57.8 bits (138), Expect = 1e-06
Identities = 29/78 (37%), Positives = 43/78 (55%)
Frame = +3
Query: 3 QPVTTGATFPLTGSPAYGYSSPIVPTSASPVIGGISPWPLSKVPYMSSPRMQALPAYVPL 182
QP + A P+ G SS I+P S P GG+ W L + PY+S PR+Q +Y+P+
Sbjct: 161 QPPSASAGLPVNGP----VSSSILPPSGVPYAGGLPTWSLPRAPYVSGPRLQGPQSYMPV 216
Query: 183 VLPTTQGTMAGQQGWSTY 236
V+ +Q + GQ S+Y
Sbjct: 217 VVSPSQSIIPGQAVCSSY 234