BLASTX nr result

ID: Zingiber23_contig00016305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00016305
         (211 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001053749.1| Os04g0599300 [Oryza sativa Japonica Group] g...    57   2e-06
emb|CAE03950.1| OSJNba0093F12.24 [Oryza sativa Japonica Group]         57   2e-06
gb|EEC77916.1| hypothetical protein OsI_17246 [Oryza sativa Indi...    57   2e-06
ref|XP_004953537.1| PREDICTED: transcription factor bHLH91-like ...    57   3e-06
ref|XP_002452697.1| hypothetical protein SORBIDRAFT_04g030850 [S...    57   3e-06
ref|XP_004308623.1| PREDICTED: transcription factor bHLH91-like ...    55   7e-06

>ref|NP_001053749.1| Os04g0599300 [Oryza sativa Japonica Group]
           gi|38345766|emb|CAE03466.2| OSJNBa0083N12.3 [Oryza
           sativa Japonica Group] gi|113565320|dbj|BAF15663.1|
           Os04g0599300 [Oryza sativa Japonica Group]
           gi|222629474|gb|EEE61606.1| hypothetical protein
           OsJ_16023 [Oryza sativa Japonica Group]
          Length = 464

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/70 (48%), Positives = 44/70 (62%)
 Frame = +2

Query: 2   VLVDKKRQGTERIKIPKLXXXXXXXXXXXQSSSIRHLRDDEHGHSQSGPLRSSWLQRRSK 181
           +LV++KR G  R K+ KL           +SSS+R +RDD+      G +RSSW+QRRSK
Sbjct: 319 ILVEQKRHGNNRRKVLKLDQEAAADG---ESSSMRPVRDDQDNQLH-GAIRSSWVQRRSK 374

Query: 182 ESLVDVRIVD 211
           E  VDVRIVD
Sbjct: 375 ECHVDVRIVD 384


>emb|CAE03950.1| OSJNba0093F12.24 [Oryza sativa Japonica Group]
          Length = 535

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/70 (48%), Positives = 44/70 (62%)
 Frame = +2

Query: 2   VLVDKKRQGTERIKIPKLXXXXXXXXXXXQSSSIRHLRDDEHGHSQSGPLRSSWLQRRSK 181
           +LV++KR G  R K+ KL           +SSS+R +RDD+      G +RSSW+QRRSK
Sbjct: 390 ILVEQKRHGNNRRKVLKLDQEAAADG---ESSSMRPVRDDQDNQLH-GAIRSSWVQRRSK 445

Query: 182 ESLVDVRIVD 211
           E  VDVRIVD
Sbjct: 446 ECHVDVRIVD 455


>gb|EEC77916.1| hypothetical protein OsI_17246 [Oryza sativa Indica Group]
          Length = 464

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/70 (48%), Positives = 44/70 (62%)
 Frame = +2

Query: 2   VLVDKKRQGTERIKIPKLXXXXXXXXXXXQSSSIRHLRDDEHGHSQSGPLRSSWLQRRSK 181
           +LV++KR G  R K+ KL           +SSS+R +RDD+      G +RSSW+QRRSK
Sbjct: 319 ILVEQKRHGNNRRKVLKLDQEAAADG---ESSSMRPVRDDQDNQLH-GAIRSSWVQRRSK 374

Query: 182 ESLVDVRIVD 211
           E  VDVRIVD
Sbjct: 375 ECHVDVRIVD 384


>ref|XP_004953537.1| PREDICTED: transcription factor bHLH91-like [Setaria italica]
          Length = 475

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/70 (47%), Positives = 47/70 (67%)
 Frame = +2

Query: 2   VLVDKKRQGTERIKIPKLXXXXXXXXXXXQSSSIRHLRDDEHGHSQSGPLRSSWLQRRSK 181
           +L++KKR  T+R K  KL           +SSS++ + DD++ +  +GP+RSSW+QRRSK
Sbjct: 330 ILMEKKRNSTDRRKKLKLDDEAADDG---ESSSMQPVSDDQN-NQMNGPIRSSWVQRRSK 385

Query: 182 ESLVDVRIVD 211
           E  VDVRIVD
Sbjct: 386 ECDVDVRIVD 395


>ref|XP_002452697.1| hypothetical protein SORBIDRAFT_04g030850 [Sorghum bicolor]
           gi|241932528|gb|EES05673.1| hypothetical protein
           SORBIDRAFT_04g030850 [Sorghum bicolor]
          Length = 473

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/70 (47%), Positives = 47/70 (67%)
 Frame = +2

Query: 2   VLVDKKRQGTERIKIPKLXXXXXXXXXXXQSSSIRHLRDDEHGHSQSGPLRSSWLQRRSK 181
           +L++KKR  T+R KI KL           +SSS++ + DD++ +  +G +RSSW+QRRSK
Sbjct: 328 ILLEKKRNSTDRRKILKLDDEAADDG---ESSSMQPVSDDQN-NQMNGAIRSSWVQRRSK 383

Query: 182 ESLVDVRIVD 211
           E  VDVRIVD
Sbjct: 384 ECDVDVRIVD 393


>ref|XP_004308623.1| PREDICTED: transcription factor bHLH91-like [Fragaria vesca subsp.
           vesca]
          Length = 465

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = +2

Query: 2   VLVDKKRQGTERIKIPKLXXXXXXXXXXXQSSSIRHLRDDEHGHS-QSGPLRSSWLQRRS 178
           +LV+KKR G ER K  K            +S +++ L D +H HS  +G LRSSWLQR+S
Sbjct: 313 LLVEKKRCGRERSKRHKTEQDIGARDDD-ESCNMKPLGDPDHDHSYNNGSLRSSWLQRKS 371

Query: 179 KESLVDVRIVD 211
           K++ VDVRI+D
Sbjct: 372 KDTEVDVRIID 382


Top