BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00016245
         (1227 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004962192.1| PREDICTED: RNA polymerase II C-terminal doma...   444   e-122
ref|XP_006654357.1| PREDICTED: RNA polymerase II C-terminal doma...   441   e-121
ref|XP_002437361.1| hypothetical protein SORBIDRAFT_10g025580 [S...   440   e-121
gb|EMS57931.1| RNA polymerase II C-terminal domain phosphatase-l...   439   e-121
ref|XP_003566293.1| PREDICTED: RNA polymerase II C-terminal doma...   439   e-120
ref|NP_001055440.1| Os05g0390500 [Oryza sativa Japonica Group] g...   437   e-120
gb|EEC79156.1| hypothetical protein OsI_19829 [Oryza sativa Indi...   429   e-118
gb|AFW77884.1| CPL3 [Zea mays]                                        429   e-117
ref|XP_003579679.1| PREDICTED: RNA polymerase II C-terminal doma...   427   e-117
ref|NP_001152445.1| CPL3 [Zea mays] gi|195656359|gb|ACG47647.1| ...   427   e-117
dbj|BAK07377.1| predicted protein [Hordeum vulgare subsp. vulgare]    427   e-117
gb|EMT13574.1| RNA polymerase II C-terminal domain phosphatase-l...   425   e-116
gb|EOY32064.1| RNA polymerase II ctd phosphatase, putative isofo...   414   e-113
ref|XP_002324547.2| hypothetical protein POPTR_0018s11760g [Popu...   409   e-112
ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal doma...   402   e-109
gb|EMJ05544.1| hypothetical protein PRUPE_ppa005647mg [Prunus pe...   402   e-109
ref|XP_006486243.1| PREDICTED: RNA polymerase II C-terminal doma...   402   e-109
ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative ...   400   e-109
ref|XP_002439741.1| hypothetical protein SORBIDRAFT_09g019310 [S...   400   e-109
ref|XP_002324546.2| hypothetical protein POPTR_0018s11760g [Popu...   399   e-108

>ref|XP_004962192.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like [Setaria italica]
          Length = 543

 Score =  444 bits (1141), Expect = e-122
 Identities = 233/391 (59%), Positives = 286/391 (73%), Gaps = 4/391 (1%)
 Frame = -3

Query: 1165 EIDLQEQRS-KRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKGLCI 989
            E++L EQ S KR+++E     +  +  T ++P +   G S   +  +CP HPG+F GLC 
Sbjct: 62   EVELLEQNSAKRRRVEE----QSQDQGTSIRPDKIATGPSKNVQVEVCP-HPGYFGGLCF 116

Query: 988  RCG--QIEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXNS 815
            RCG  Q EED SGVAFGYIHK LRLG  EI+RLRGAD                     NS
Sbjct: 117  RCGKPQDEEDASGVAFGYIHKGLRLGTSEIDRLRGADLKNLLRERKLVLILDLDHTLINS 176

Query: 814  TRFADITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMYIY 635
            T+  DI+S E  L  +   +KDDPDRS+F LD+M MLTKLRPFV NFLKEAS+  EMYIY
Sbjct: 177  TKLQDISSAENELGIRTAALKDDPDRSIFSLDSMQMLTKLRPFVRNFLKEASNMFEMYIY 236

Query: 634  TMAERSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEAVW 455
            TM +++YA+EIAKLLDP  VYF SKVI+ SDCTQRHQKGLDVILGAES+ VILDDTE VW
Sbjct: 237  TMGDKAYAIEIAKLLDPSNVYFPSKVISNSDCTQRHQKGLDVILGAESVAVILDDTEYVW 296

Query: 454  HRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMFFD 275
             +HK+NLI MERYH+FASSCRQFGF  KSLS+ M+DERESDGALATVL +LKR H +FFD
Sbjct: 297  QKHKENLILMERYHYFASSCRQFGFGVKSLSESMQDERESDGALATVLDVLKRIHTIFFD 356

Query: 274  PDVASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTE 95
              V + +S+RDVR ++K +R+E+L+GC++VFSRVFP+ S  Q+  +WKMAE LGA C T+
Sbjct: 357  TAVETALSSRDVRQVIKTVRKEVLEGCKLVFSRVFPNTSRPQEQMMWKMAEHLGAVCSTD 416

Query: 94   VDPSVTHVVSTDTGTQKAHWAAQ-KKFLVSP 5
            VD +VTHVV+ D GT+KA WA + KKFLV P
Sbjct: 417  VDSTVTHVVAVDLGTEKARWAVKNKKFLVHP 447


>ref|XP_006654357.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like [Oryza brachyantha]
          Length = 557

 Score =  441 bits (1134), Expect = e-121
 Identities = 228/395 (57%), Positives = 281/395 (71%), Gaps = 3/395 (0%)
 Frame = -3

Query: 1180 VKNDKEIDLQEQRSKRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFK 1001
            V   +E  +++  SKR+++E     +  +    ++P ++ +G+S   K  ICPPHPGFF 
Sbjct: 64   VVEQEEAKVEQSSSKRRRVED----QHQDEGKAMRPNDDTVGSSKDVKIEICPPHPGFFG 119

Query: 1000 GLCIRCG--QIEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXX 827
            GLC +CG  Q EED  GVAFGYIHK L LG  EI+RLRGAD                   
Sbjct: 120  GLCFKCGKKQDEEDVPGVAFGYIHKGLTLGTSEIDRLRGADLKNLLRERRLVLILDLDHT 179

Query: 826  XXNSTRFADITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCE 647
              NST+  D+++ E  L  Q    KDDP+RSLFRLD M MLTKLRPFV  FLKEAS+  E
Sbjct: 180  LINSTKLLDLSAAENELGIQSAASKDDPNRSLFRLDAMQMLTKLRPFVREFLKEASNMFE 239

Query: 646  MYIYTMAERSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDT 467
            MYIYTM +++YA+EIAKLLDP+ VYF S VI+ SDCTQRHQKGLDVILGAESL VILDDT
Sbjct: 240  MYIYTMGDKAYAIEIAKLLDPENVYFGSNVISNSDCTQRHQKGLDVILGAESLAVILDDT 299

Query: 466  EAVWHRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQ 287
            E VW +HK+NLI MERYH+FASSCRQFGF+A+SLS+ M+DERE DGALAT+L IL+R H 
Sbjct: 300  EYVWQKHKENLILMERYHYFASSCRQFGFSARSLSESMQDEREGDGALATILDILRRIHS 359

Query: 286  MFFDPDVASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGAT 107
            +FFD  V + + +RDVR ++K +RQEIL GC++VF+RVFP     QD  +WKMAE+LGA 
Sbjct: 360  IFFDSAVQNPLPSRDVRQVIKRVRQEILDGCKLVFTRVFPLHQRPQDQMLWKMAEQLGAV 419

Query: 106  CYTEVDPSVTHVVSTDTGTQKAHWA-AQKKFLVSP 5
            C T+VD  VTHVV+ D GT+KA WA   KKFLV P
Sbjct: 420  CCTDVDSMVTHVVALDLGTEKARWAVGNKKFLVHP 454


>ref|XP_002437361.1| hypothetical protein SORBIDRAFT_10g025580 [Sorghum bicolor]
            gi|241915584|gb|EER88728.1| hypothetical protein
            SORBIDRAFT_10g025580 [Sorghum bicolor]
          Length = 558

 Score =  440 bits (1132), Expect = e-121
 Identities = 235/393 (59%), Positives = 286/393 (72%), Gaps = 4/393 (1%)
 Frame = -3

Query: 1171 DKEIDLQEQR-SKRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKGL 995
            D E++  EQ  +KR+++E  + L+D  T   V+P +   G S   +   CP HPG+F GL
Sbjct: 62   DPEVEAVEQNGTKRRRVE--EQLQDQGTS--VRPDKIPTGASKNVQVEACP-HPGYFGGL 116

Query: 994  CIRCG--QIEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXX 821
            C RCG  Q EE+ SGVAFGYIHK LRLG  EI+RLRGAD                     
Sbjct: 117  CFRCGKPQDEENVSGVAFGYIHKGLRLGTSEIDRLRGADLKNLLRERKLVLILDLDHTLI 176

Query: 820  NSTRFADITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMY 641
            NST+  DI+S E+ L  Q    KDDP+RS+F LD+M MLTKLRPFV  FLKEAS+  EMY
Sbjct: 177  NSTKLQDISSAEKDLGIQTAASKDDPNRSIFSLDSMQMLTKLRPFVREFLKEASNMFEMY 236

Query: 640  IYTMAERSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEA 461
            IYTM +++YA+EIAKLLDP  +YF SKVI+ SDCTQRHQKGLDVILGAES+ VILDDTE 
Sbjct: 237  IYTMGDKAYAIEIAKLLDPSNIYFPSKVISNSDCTQRHQKGLDVILGAESVAVILDDTEY 296

Query: 460  VWHRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMF 281
            VW +HK+NLI MERYHFFASSCRQFGF  +SLS+ M+DERESDGALATVL +LKR H +F
Sbjct: 297  VWQKHKENLILMERYHFFASSCRQFGFGVRSLSESMQDERESDGALATVLDVLKRIHSIF 356

Query: 280  FDPDVASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCY 101
            FD  V +D+S++DVR ++K +R+EILQGC+IVFSRVFP+ +  Q+  +WKMAE LGA C 
Sbjct: 357  FDLAVETDLSSQDVRQVIKAVRKEILQGCKIVFSRVFPNNTRPQEQMLWKMAEHLGAVCS 416

Query: 100  TEVDPSVTHVVSTDTGTQKAHW-AAQKKFLVSP 5
            T+VD SVTHVV+ D GT+KA W  A KKFLV P
Sbjct: 417  TDVDSSVTHVVTVDLGTEKARWGVANKKFLVHP 449


>gb|EMS57931.1| RNA polymerase II C-terminal domain phosphatase-like 4 [Triticum
            urartu]
          Length = 589

 Score =  439 bits (1130), Expect = e-121
 Identities = 225/385 (58%), Positives = 279/385 (72%), Gaps = 3/385 (0%)
 Frame = -3

Query: 1150 EQRSKRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKGLCIRCG--Q 977
            E  +KR+K++    ++  + ET ++P E+ IG+S   +  ICPPHPG+F GLC RCG  Q
Sbjct: 118  EASAKRRKVK----VQYQDRETAIRPDEDSIGSSEDAQIKICPPHPGYFGGLCFRCGKRQ 173

Query: 976  IEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXNSTRFADI 797
             EED  GVAFGY+HK LRLG  EI+RLRG+D                     NST+  DI
Sbjct: 174  DEEDVPGVAFGYVHKGLRLGTTEIDRLRGSDLKNLLRERKLILILDLDHTLINSTKLHDI 233

Query: 796  TSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMYIYTMAERS 617
            ++ E  L  Q    KDDP+ SLF L+ M MLTKLRPFV  FLKEAS+  EMYIYTM +++
Sbjct: 234  SAAENNLGIQTAASKDDPNGSLFTLEGMQMLTKLRPFVRKFLKEASNMFEMYIYTMGDKA 293

Query: 616  YAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEAVWHRHKDN 437
            YA+EIAKLLDP  VYF+SKVI+ SDCTQRHQKGLD++LGAES+ VILDDTE VW +HK+N
Sbjct: 294  YAIEIAKLLDPRNVYFNSKVISNSDCTQRHQKGLDMVLGAESVAVILDDTEYVWQKHKEN 353

Query: 436  LIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMFFDPDVASD 257
            LI MERYH+FASSCRQFGF+ KSLS+ M+DER SDGALAT+L +LKR H +FFD  V + 
Sbjct: 354  LILMERYHYFASSCRQFGFSVKSLSEFMQDERGSDGALATILDVLKRIHTIFFDSAVETA 413

Query: 256  VSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSVT 77
            +S+RDVR ++K +RQE+LQGC++VFSRVFPS S  QD  IWKMAE+LGA C  +VD ++T
Sbjct: 414  LSSRDVRQVIKRVRQEVLQGCKLVFSRVFPSSSRPQDQFIWKMAEQLGAICSADVDSTIT 473

Query: 76   HVVSTDTGTQKAHWAA-QKKFLVSP 5
            HVV+ D GT KA WA    K LV P
Sbjct: 474  HVVAVDVGTDKARWAVNNNKILVHP 498


>ref|XP_003566293.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like [Brachypodium distachyon]
          Length = 492

 Score =  439 bits (1129), Expect = e-120
 Identities = 229/391 (58%), Positives = 286/391 (73%), Gaps = 4/391 (1%)
 Frame = -3

Query: 1165 EIDLQEQRS-KRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKGLCI 989
            E+D  EQ S KR+++E     +  +  T ++P E+ IG+    +  ICPPHPGF +GLCI
Sbjct: 63   EVDTVEQGSTKRRRVEE----QHQDRGTAMRPDEDAIGSFKDAEIKICPPHPGFLRGLCI 118

Query: 988  RCGQI--EEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXNS 815
            +CG+I  EED  GVA GYIH+ LRLG  EIERLRG+D                     NS
Sbjct: 119  KCGKIQDEEDVPGVACGYIHEGLRLGTSEIERLRGSDLKKLLRERKLVLILDLDHTLINS 178

Query: 814  TRFADITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMYIY 635
            TR  DI++ E  L  Q   +KDDPDRSLF L+ MHMLTKLRPFV  FLKEAS+  EMYIY
Sbjct: 179  TRLHDISAAEMDLGIQTAALKDDPDRSLFTLERMHMLTKLRPFVRRFLKEASNMFEMYIY 238

Query: 634  TMAERSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEAVW 455
            TM +++Y++E+AKLLDP  VYF SKVI+ SDCTQRHQKGLDV+LGAES+ VILDDTE VW
Sbjct: 239  TMGDKAYSIEVAKLLDPGNVYFGSKVISNSDCTQRHQKGLDVVLGAESIAVILDDTEDVW 298

Query: 454  HRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMFFD 275
             +HK+NLI MERYH+FASSCRQFGF+ +SLS+LM DERESDGAL+T+L +LKR H +FFD
Sbjct: 299  QKHKENLILMERYHYFASSCRQFGFSVRSLSELMVDERESDGALSTILDVLKRIHTIFFD 358

Query: 274  PDVASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTE 95
              V + +S+R +  ++K +RQE+LQGC++VFSRVFPS S  QD  IWKMAE+LGA+C   
Sbjct: 359  SGVETALSSRTLM-VIKRVRQEVLQGCKLVFSRVFPSNSCPQDQIIWKMAEKLGASCCAH 417

Query: 94   VDPSVTHVVSTDTGTQKAHWAAQ-KKFLVSP 5
            VD +VTHVV+ D GT+KA WA + KKFL+ P
Sbjct: 418  VDSTVTHVVAVDVGTEKARWAVENKKFLLHP 448


>ref|NP_001055440.1| Os05g0390500 [Oryza sativa Japonica Group] gi|57863785|gb|AAS86390.2|
            unknown protein [Oryza sativa Japonica Group]
            gi|113578991|dbj|BAF17354.1| Os05g0390500 [Oryza sativa
            Japonica Group] gi|215695102|dbj|BAG90293.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|222631469|gb|EEE63601.1| hypothetical protein
            OsJ_18418 [Oryza sativa Japonica Group]
          Length = 536

 Score =  437 bits (1123), Expect = e-120
 Identities = 226/395 (57%), Positives = 281/395 (71%), Gaps = 3/395 (0%)
 Frame = -3

Query: 1180 VKNDKEIDLQEQRSKRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFK 1001
            V   ++  +++  +KR+++E     +      ++K  E+ +G+S   K   CPPHPGFF 
Sbjct: 65   VVEQEDAIVEQSSTKRRRVED----QHRHQAVVMKSDEDTVGSSKDVKIDECPPHPGFFG 120

Query: 1000 GLCIRCG--QIEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXX 827
            GLC RCG  Q EED  GVAFGYIHK LRLG  EI+RLRGAD                   
Sbjct: 121  GLCYRCGKRQDEEDVPGVAFGYIHKGLRLGTTEIDRLRGADLKNLLRERKLVLILDLDHT 180

Query: 826  XXNSTRFADITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCE 647
              NST+  D+++ E  L  Q    +  PDRSLF L+TM MLTKLRPFV  FLKEAS   E
Sbjct: 181  LINSTKLFDLSAAENELGIQSAAKEVVPDRSLFTLETMQMLTKLRPFVRRFLKEASDMFE 240

Query: 646  MYIYTMAERSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDT 467
            MYIYTM +++YA+EIAKLLDPD VYF SKVI+ SDCTQRHQKGLDV+LG ES+ VILDDT
Sbjct: 241  MYIYTMGDKAYAIEIAKLLDPDNVYFGSKVISNSDCTQRHQKGLDVVLGDESVAVILDDT 300

Query: 466  EAVWHRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQ 287
            E VW +HK+NLI MERYH+FASSCRQFGF A+SLS+ M+DERE+DGALAT+L +L+R H 
Sbjct: 301  EYVWQKHKENLILMERYHYFASSCRQFGFGARSLSETMQDERENDGALATILDVLERIHT 360

Query: 286  MFFDPDVASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGAT 107
            +FFDPD    +S+RDVR ++K +RQE+LQGC++VF+RVFP     QD  IWKMAE+LGA 
Sbjct: 361  IFFDPDDQKPLSSRDVRQVIKRVRQEVLQGCKLVFTRVFPLHQRQQDQMIWKMAEQLGAV 420

Query: 106  CYTEVDPSVTHVVSTDTGTQKAHWA-AQKKFLVSP 5
            C T+VD +VTHVV+ D GT+KA WA + KKFLV P
Sbjct: 421  CCTDVDSTVTHVVALDLGTEKARWAVSNKKFLVHP 455


>gb|EEC79156.1| hypothetical protein OsI_19829 [Oryza sativa Indica Group]
          Length = 574

 Score =  429 bits (1104), Expect = e-118
 Identities = 219/354 (61%), Positives = 261/354 (73%), Gaps = 3/354 (0%)
 Frame = -3

Query: 1057 GTSTAGKYVICPPHPGFFKGLCIRCG--QIEEDGSGVAFGYIHKYLRLGNVEIERLRGAD 884
            G+S   K   CPPHPGFF GLC RCG  Q EED  GVAFGYIHK LRLG  EI+RLRGAD
Sbjct: 128  GSSKDVKIDECPPHPGFFGGLCYRCGKRQDEEDVPGVAFGYIHKGLRLGTTEIDRLRGAD 187

Query: 883  XXXXXXXXXXXXXXXXXXXXXNSTRFADITSDEEYLFRQIDGMKDDPDRSLFRLDTMHML 704
                                 NST+  D+++ E  L  Q    +  PDRSLF L+TM ML
Sbjct: 188  LKNLLRERKLVLILDLDHTLINSTKLFDLSAAENELGIQSAAKEVVPDRSLFTLETMQML 247

Query: 703  TKLRPFVHNFLKEASSFCEMYIYTMAERSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQ 524
            TKLRPFV  FLKEAS   EMYIYTM +++YA+EIAKLLDPD VYF SKVI+ SDCTQRHQ
Sbjct: 248  TKLRPFVRRFLKEASDMFEMYIYTMGDKAYAIEIAKLLDPDNVYFGSKVISNSDCTQRHQ 307

Query: 523  KGLDVILGAESLVVILDDTEAVWHRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDE 344
            KGLDV+LG ES+ VILDDTE VW +HK+NLI MERYH+FASSCRQFGF A+SLS+ M+DE
Sbjct: 308  KGLDVVLGDESVAVILDDTEYVWQKHKENLILMERYHYFASSCRQFGFGARSLSETMQDE 367

Query: 343  RESDGALATVLKILKRTHQMFFDPDVASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPS 164
            RE+DGALAT+L +L+R H +FFDPD    +S+RDVR ++K +RQE+LQGC++VF+RVFP 
Sbjct: 368  RENDGALATILDVLERIHTIFFDPDDQKPLSSRDVRQVIKRVRQEVLQGCKLVFTRVFPL 427

Query: 163  KSPAQDHPIWKMAERLGATCYTEVDPSVTHVVSTDTGTQKAHWA-AQKKFLVSP 5
                QD  +WKMAE+LGA C T+VD +VTHVV+ D GT+KA WA + KKFLV P
Sbjct: 428  HQRQQDQMLWKMAEQLGAVCCTDVDSTVTHVVALDLGTEKARWAVSNKKFLVHP 481


>gb|AFW77884.1| CPL3 [Zea mays]
          Length = 533

 Score =  429 bits (1102), Expect = e-117
 Identities = 228/387 (58%), Positives = 277/387 (71%), Gaps = 3/387 (0%)
 Frame = -3

Query: 1156 LQEQRSKRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKGLCIRCG- 980
            +++  +KR+++E  +  +D  T   V+P +   G S   +   CP HPG F GLCI CG 
Sbjct: 66   IEQNGTKRRRVE--EQCQDQGTS--VRPDKIPTGASKIVQVEACP-HPGHFGGLCIICGK 120

Query: 979  -QIEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXNSTRFA 803
             Q EED SGVAFGYIHK LRLG  EI+RLRGAD                     NST+  
Sbjct: 121  PQDEEDVSGVAFGYIHKGLRLGTSEIDRLRGADLKNLLRERKLVLILDLDHTLINSTKLQ 180

Query: 802  DITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMYIYTMAE 623
            DI+S E+ L  Q    KDDP+RS+F LD M MLTKLRPFV  FLKEAS+  EMYIYTM +
Sbjct: 181  DISSAEKDLGIQSAASKDDPNRSIFALDLMPMLTKLRPFVREFLKEASNMFEMYIYTMGD 240

Query: 622  RSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEAVWHRHK 443
            ++YA+EIAKLLDP  +YF SKVI+ SDCTQRHQKGLDVILGAES+ VILDDTE VW +HK
Sbjct: 241  KAYAIEIAKLLDPSNIYFPSKVISNSDCTQRHQKGLDVILGAESVAVILDDTEYVWQKHK 300

Query: 442  DNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMFFDPDVA 263
            +NLI MERYHFFASSCRQFGF  +SLS+ ++DERESDGALATVL +LKR H  FFD    
Sbjct: 301  ENLILMERYHFFASSCRQFGFGVRSLSESLQDERESDGALATVLDVLKRIHATFFDMAAE 360

Query: 262  SDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPS 83
            +D+S+RD+R ++K +R+EILQGC+IVFSRVFP+ +  Q+  +WKMAE LGA C  +VDPS
Sbjct: 361  TDLSSRDIRQVIKTLRKEILQGCKIVFSRVFPNNTRPQEQMVWKMAEYLGAVCVKDVDPS 420

Query: 82   VTHVVSTDTGTQKAHWAA-QKKFLVSP 5
            VTHVV+ D GT+KA W    KKFLV P
Sbjct: 421  VTHVVTVDLGTEKARWGLNNKKFLVHP 447


>ref|XP_003579679.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like [Brachypodium distachyon]
          Length = 493

 Score =  427 bits (1099), Expect = e-117
 Identities = 224/392 (57%), Positives = 281/392 (71%), Gaps = 5/392 (1%)
 Frame = -3

Query: 1165 EIDLQEQRS-KRQKLEGFDTLEDLETETL-VKPIEEHIGTSTAGKYVICPPHPGFFKGLC 992
            E++  EQ S KR+K+     +E ++   + +KP E+  G+    +  ICPPHPGFF GLC
Sbjct: 62   EVEAVEQSSTKRRKV-----IEQVQDRGITIKPDEDAKGSCKDSQIKICPPHPGFFGGLC 116

Query: 991  IRCG--QIEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXN 818
             RCG  Q EED  GVAFGYIHK LRLG  EI+RLRG++                     N
Sbjct: 117  FRCGKRQDEEDVPGVAFGYIHKGLRLGTSEIDRLRGSNVKSLLRERKLVLILDLDHTLIN 176

Query: 817  STRFADITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMYI 638
            ST+  DI++ E  L  Q    +D P++SLF L+ M MLTKLRPFV  FLKEAS+  EMYI
Sbjct: 177  STKLHDISAAERDLGIQTFASEDAPEKSLFTLEAMQMLTKLRPFVCKFLKEASNMFEMYI 236

Query: 637  YTMAERSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEAV 458
            YTM +++YA+EIAKLLDP  VYF SKVI+ SDCTQRHQKGLDV+LGAE++ +ILDDTE V
Sbjct: 237  YTMGDKAYAIEIAKLLDPGNVYFGSKVISNSDCTQRHQKGLDVVLGAENVAIILDDTEYV 296

Query: 457  WHRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMFF 278
            W +HK+NLI MERYH+FASSCRQFGF+ K+LS+ M+DERESDGALAT L +LKR H +FF
Sbjct: 297  WQKHKENLILMERYHYFASSCRQFGFSVKALSESMQDERESDGALATTLDVLKRIHTLFF 356

Query: 277  DPDVASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYT 98
            D  V + +S+RDVR ++K +RQE+LQGC++VFSRVFPS S  QD  IWKMAE+LGA C  
Sbjct: 357  DSAVETALSSRDVRQVIKKVRQEVLQGCKVVFSRVFPSSSRPQDQIIWKMAEQLGAICCA 416

Query: 97   EVDPSVTHVVSTDTGTQKAHWA-AQKKFLVSP 5
            ++D +VTHVV+ D+GT+KA WA    K LV P
Sbjct: 417  DMDSTVTHVVAVDSGTEKARWAVGNNKILVHP 448


>ref|NP_001152445.1| CPL3 [Zea mays] gi|195656359|gb|ACG47647.1| CPL3 [Zea mays]
          Length = 531

 Score =  427 bits (1099), Expect = e-117
 Identities = 227/387 (58%), Positives = 277/387 (71%), Gaps = 3/387 (0%)
 Frame = -3

Query: 1156 LQEQRSKRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKGLCIRCG- 980
            +++  +KR+++E  +  +D  T   V+P +   G S   +   CP HPG F GLCI CG 
Sbjct: 64   IEQNGTKRRRVE--EQCQDQGTS--VRPDKIPTGASKIVQVEACP-HPGHFGGLCIICGK 118

Query: 979  -QIEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXNSTRFA 803
             Q EED SGVAFGYIHK LRLG  EI+RLRGAD                     NST+  
Sbjct: 119  PQDEEDVSGVAFGYIHKGLRLGTSEIDRLRGADLKNLLRERKLVLILDLDHTLINSTKLQ 178

Query: 802  DITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMYIYTMAE 623
            DI+S E+ L  Q    KDDP+RS+F LD M MLTKLRPFV  FLKEAS+  EMYIYTM +
Sbjct: 179  DISSAEKDLGIQSAASKDDPNRSIFALDLMPMLTKLRPFVREFLKEASNMFEMYIYTMGD 238

Query: 622  RSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEAVWHRHK 443
            ++YA+EIAKLLDP  +YF SKVI+ SDCTQRHQKGLDVILGAES+ VILDDTE VW +HK
Sbjct: 239  KAYAIEIAKLLDPSNIYFPSKVISNSDCTQRHQKGLDVILGAESVAVILDDTEYVWQKHK 298

Query: 442  DNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMFFDPDVA 263
            +NLI MERYHFFASSCRQFGF  +SLS+ ++DERESDGALATVL +LKR H  FFD    
Sbjct: 299  ENLILMERYHFFASSCRQFGFGVRSLSESLQDERESDGALATVLDVLKRIHATFFDMAAE 358

Query: 262  SDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPS 83
            +D+S+RD+R ++K +R+EILQGC+IVFSRVFP+ +  Q+  +WKMAE LGA C  +VDPS
Sbjct: 359  TDLSSRDIRQVIKTLRKEILQGCKIVFSRVFPNNTRPQEQMVWKMAEYLGAVCVKDVDPS 418

Query: 82   VTHVVSTDTGTQKAHWAA-QKKFLVSP 5
            VTHVV+ D GT+K+ W    KKFLV P
Sbjct: 419  VTHVVTVDLGTEKSRWGLNNKKFLVHP 445


>dbj|BAK07377.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 488

 Score =  427 bits (1097), Expect = e-117
 Identities = 224/384 (58%), Positives = 280/384 (72%), Gaps = 5/384 (1%)
 Frame = -3

Query: 1141 SKRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKGLCIRCG--QIEE 968
            +KR+++E  +  +D  T T  +P E+ IG+    +   CPPHPGFF GLCI CG  Q EE
Sbjct: 70   NKRRRVE--EHRQDQGTAT--RPEEDVIGSVKDAQIKKCPPHPGFFGGLCINCGKSQDEE 125

Query: 967  DGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXNSTRFADITSD 788
            D  GVAFGYIHK LRLG  E++RLR ++                     NSTR  DI++ 
Sbjct: 126  DVPGVAFGYIHKGLRLGTSEMDRLRESEVKNLLRERKLVLILDLDHTLINSTRLHDISAA 185

Query: 787  EEYLFRQIDGMK--DDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMYIYTMAERSY 614
            E  L  Q    K  DDP+RSLF L  MHMLTKLRPFV  FL+EAS+  +MYIYTM +++Y
Sbjct: 186  EMDLGIQTAASKNADDPERSLFTLQGMHMLTKLRPFVRKFLEEASNMFDMYIYTMGDKAY 245

Query: 613  AMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEAVWHRHKDNL 434
            A+EIAKLLDP  VYFDSKVI+ SDCTQRHQKGLDV+LG + + VI+DDTE VW +HK+NL
Sbjct: 246  AIEIAKLLDPGNVYFDSKVISNSDCTQRHQKGLDVVLGDDKVAVIIDDTEHVWQKHKENL 305

Query: 433  IQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMFFDPDVASDV 254
            I MERYH+FA+SCRQFGF+ +SLS+LM+DERESDGALAT+L +LKR H +FFD  V + +
Sbjct: 306  ILMERYHYFAASCRQFGFSDQSLSELMQDERESDGALATILDVLKRIHTIFFDSGVETAL 365

Query: 253  STRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSVTH 74
            S+RDVR ++K +RQE+LQGC++VFSRVFPS   +QD  +WKMAE+LGA C +EVDPSVTH
Sbjct: 366  SSRDVRQVIKRVRQEVLQGCKLVFSRVFPSDCRSQDQIMWKMAEQLGAVCCSEVDPSVTH 425

Query: 73   VVSTDTGTQKAHWAA-QKKFLVSP 5
            VV+   GT+KA WAA  KKFL+ P
Sbjct: 426  VVAVHAGTEKARWAAGNKKFLLHP 449


>gb|EMT13574.1| RNA polymerase II C-terminal domain phosphatase-like protein 4
            [Aegilops tauschii]
          Length = 632

 Score =  425 bits (1093), Expect = e-116
 Identities = 227/418 (54%), Positives = 282/418 (67%), Gaps = 39/418 (9%)
 Frame = -3

Query: 1141 SKRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKGLCIRCG--QIEE 968
            +KR+K++    ++  + ET ++P E+ IG+S   +  ICPPHPG+F GLC RCG  Q EE
Sbjct: 126  AKRRKVK----VQYQDRETAIRPDEDSIGSSEDAQIKICPPHPGYFGGLCFRCGKRQDEE 181

Query: 967  DGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXNSTRFADITSD 788
            D  GVAFGY+HK LRLG  EI+RLRG+D                     NST+  DI++ 
Sbjct: 182  DVPGVAFGYVHKGLRLGTTEIDRLRGSDLKNLLREKKLILILDLDHTLINSTKLHDISAA 241

Query: 787  EEYLFRQIDGMK------------------------------------DDPDRSLFRLDT 716
            E  L  QI   K                                    DDP+ SLF L+ 
Sbjct: 242  ENNLGIQIAASKGCRISYSSPETSVVHGYFLPPSVSRLLQLTTNMPYADDPNGSLFTLEG 301

Query: 715  MHMLTKLRPFVHNFLKEASSFCEMYIYTMAERSYAMEIAKLLDPDKVYFDSKVITQSDCT 536
            M MLTKLRPFV  FLKEAS+  EMYIYTM +++YA+EIAKLLDP  VYF+SKVI+ SDCT
Sbjct: 302  MQMLTKLRPFVRKFLKEASNMFEMYIYTMGDKAYAIEIAKLLDPRNVYFNSKVISNSDCT 361

Query: 535  QRHQKGLDVILGAESLVVILDDTEAVWHRHKDNLIQMERYHFFASSCRQFGFNAKSLSQL 356
            QRHQKGLD++LGAES+ VILDDTE VW +HK+NLI MERYH+FASSCRQFGF+ KSLS+L
Sbjct: 362  QRHQKGLDMVLGAESVAVILDDTEYVWQKHKENLILMERYHYFASSCRQFGFSVKSLSEL 421

Query: 355  MKDERESDGALATVLKILKRTHQMFFDPDVASDVSTRDVRPLLKGIRQEILQGCRIVFSR 176
            M+DER SDGALAT+L +LKR H +FFD  V + +S+RDVR ++K +RQE+LQGC++VFSR
Sbjct: 422  MQDERGSDGALATILDVLKRIHTIFFDLAVETALSSRDVRQVIKRVRQEVLQGCKLVFSR 481

Query: 175  VFPSKSPAQDHPIWKMAERLGATCYTEVDPSVTHVVSTDTGTQKAHWAAQ-KKFLVSP 5
            VFPS S  QD  IWKMAE+LGA C  +VD ++THVV+ D GT KA WA + KK LV P
Sbjct: 482  VFPSSSRPQDQFIWKMAEQLGAICSADVDSTITHVVAVDVGTDKARWAVKNKKILVHP 539


>gb|EOY32064.1| RNA polymerase II ctd phosphatase, putative isoform 1 [Theobroma
            cacao]
          Length = 469

 Score =  414 bits (1065), Expect = e-113
 Identities = 222/396 (56%), Positives = 271/396 (68%), Gaps = 3/396 (0%)
 Frame = -3

Query: 1183 NVKNDKEIDLQEQRSKRQKLEGFDTLEDLETETLVKPIEEHI--GTSTAGKYVICPPHPG 1010
            N  +D + DL  QR+KR K E  + LE+    T    IE+ I      + K  IC  HPG
Sbjct: 50   NDDHDDDDDLDSQRNKRCKTEKLEDLEESRGSTSQGLIEDKIVIHAELSLKKDICT-HPG 108

Query: 1009 FFKGLCIRCGQIEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXX 830
             F  +CI CGQ  +D SGV FGYIHK LRLGN EI RLR  D                  
Sbjct: 109  SFGQMCILCGQRLDDESGVTFGYIHKGLRLGNDEIVRLRSTDMKNLLRHKKLYLVLDLDH 168

Query: 829  XXXNSTRFADITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFC 650
               NST+   +T DEEYL  Q D ++D    SLF LD MHM+TKLRPFV  FLKEAS   
Sbjct: 169  TLLNSTQLMHLTPDEEYLKGQSDSLQDVSRGSLFMLDFMHMMTKLRPFVRTFLKEASEMF 228

Query: 649  EMYIYTMAERSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDD 470
            EMYIYTM +R YA+E+AKLLDP + YF  +VI++ D TQ+HQKGLDV+LG ES VVILDD
Sbjct: 229  EMYIYTMGDRPYALEMAKLLDPRREYFSDRVISRDDGTQKHQKGLDVVLGQESAVVILDD 288

Query: 469  TEAVWHRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTH 290
            TE  W +HKDNLI MERYH+FASSC QFG+  KSLSQL  DE E DGALA+VLK L++ H
Sbjct: 289  TENAWMKHKDNLILMERYHYFASSCHQFGYKCKSLSQLKSDESEPDGALASVLKALRQIH 348

Query: 289  QMFFDPDVASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGA 110
             MFFD ++  ++++RDVR +LK +++E+L+GC+IVFS VFP+  PA+ HP+WKMAE+LGA
Sbjct: 349  HMFFD-ELDCNLASRDVRQVLKTVQEEVLKGCKIVFSHVFPTNFPAESHPLWKMAEQLGA 407

Query: 109  TCYTEVDPSVTHVVSTDTGTQKAHWAA-QKKFLVSP 5
            TC TE D SVTHVVSTD GT+K+ WA  +KKFLV P
Sbjct: 408  TCSTETDLSVTHVVSTDAGTEKSRWAVKEKKFLVHP 443


>ref|XP_002324547.2| hypothetical protein POPTR_0018s11760g [Populus trichocarpa]
            gi|550318538|gb|EEF03112.2| hypothetical protein
            POPTR_0018s11760g [Populus trichocarpa]
          Length = 472

 Score =  409 bits (1052), Expect = e-112
 Identities = 213/392 (54%), Positives = 276/392 (70%), Gaps = 1/392 (0%)
 Frame = -3

Query: 1177 KNDKEIDLQEQRSKRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKG 998
            + D + D Q +R KR K+E  + +ED    T    ++ +   S + +  IC  HPG F  
Sbjct: 60   EEDDDSDFQRKRVKRSKVETVEIVEDDGGTTSFASLKHNSEASISKE--ICT-HPGSFGT 116

Query: 997  LCIRCGQIEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXN 818
            +CI CGQ+ +  SGV FGYIHK LRLGN EI RLR  D                     N
Sbjct: 117  MCIVCGQLLDGESGVTFGYIHKGLRLGNDEIVRLRNTDMKNLLRHKKLYLILDLDHTLLN 176

Query: 817  STRFADITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMYI 638
            ST+   +T DEEYL  Q D ++D    SLF L +M M+TKLRPFV  FLKEAS   EMYI
Sbjct: 177  STQLMHMTLDEEYLNGQTDSLQDVSKGSLFMLSSMQMMTKLRPFVRTFLKEASQMFEMYI 236

Query: 637  YTMAERSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEAV 458
            YTM +R+YA+E+AKLLDP + YF++KVI++ D TQRHQKGLDV+LG ES V+ILDDTE  
Sbjct: 237  YTMGDRAYALEMAKLLDPGREYFNAKVISRDDGTQRHQKGLDVVLGQESAVLILDDTENA 296

Query: 457  WHRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMFF 278
            W +HKDNLI MERYHFFASSC QFGFN KSLS+   DE ES+GALA++LK+L++ HQ+FF
Sbjct: 297  WMKHKDNLILMERYHFFASSCHQFGFNCKSLSEQKTDESESEGALASILKVLRKIHQIFF 356

Query: 277  DPDVASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYT 98
            + ++  ++  RDVR +LK +R+++L+GC+IVFSRVFP++S A +H +W+MAE+LGATC T
Sbjct: 357  E-ELEENMDGRDVRQVLKTVRKDVLKGCKIVFSRVFPTQSQADNHHLWRMAEQLGATCST 415

Query: 97   EVDPSVTHVVSTDTGTQKAHWAAQ-KKFLVSP 5
            E+DPSVTHVVS D+GT+K+HWA +  KFLV P
Sbjct: 416  ELDPSVTHVVSKDSGTEKSHWALKHNKFLVQP 447


>ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like [Cucumis sativus]
          Length = 452

 Score =  402 bits (1034), Expect = e-109
 Identities = 210/381 (55%), Positives = 263/381 (69%), Gaps = 1/381 (0%)
 Frame = -3

Query: 1144 RSKRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKGLCIRCGQIEED 965
            R KR+K+E  +  E    E ++  +EE        K  +C  HPG F  +CI CGQ  ++
Sbjct: 48   RIKRRKVEKLENSE----EDIMHEVEEQ-SLEVLSKQQLCS-HPGSFGNMCIICGQRLDE 101

Query: 964  GSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXNSTRFADITSDE 785
             SGV FGYIHK LRL N EI R+R  +                     NST    +T +E
Sbjct: 102  ESGVTFGYIHKELRLNNDEINRMRNKEMKELLQRKKLILVLDLDHTLLNSTELRYLTVEE 161

Query: 784  EYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMYIYTMAERSYAME 605
            EYL  Q D + D    SLF L+++H +TKLRPFVH+FLKEAS   EMYIYTM ER YA E
Sbjct: 162  EYLRSQTDSLDDVTKGSLFLLNSVHTMTKLRPFVHSFLKEASKLFEMYIYTMGERRYAFE 221

Query: 604  IAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEAVWHRHKDNLIQM 425
            +AKLLDP K YF SKVI++ D TQ+HQKGLDV+LG ES V+ILDDTE  W +HK+NLI M
Sbjct: 222  MAKLLDPKKEYFSSKVISRDDGTQKHQKGLDVVLGKESAVLILDDTENAWTKHKENLILM 281

Query: 424  ERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMFFDPDVASDVSTR 245
            ERYHFFASSCRQFGFN KSLS+L  DE E+DGAL T+LK+LK+ H MFF+ +V+ D+  R
Sbjct: 282  ERYHFFASSCRQFGFNCKSLSELKNDESETDGALTTILKVLKQVHHMFFN-EVSGDLVDR 340

Query: 244  DVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSVTHVVS 65
            DVR +LK +R E+L+GC++VFSRVFP+K  A++H +WKM E+LG TC TE+D SVTHVV+
Sbjct: 341  DVRQVLKTVRAEVLEGCKVVFSRVFPTKFQAENHQLWKMVEQLGGTCSTELDQSVTHVVA 400

Query: 64   TDTGTQKAHWA-AQKKFLVSP 5
            TD GT+K+ WA  +KKFLV P
Sbjct: 401  TDAGTEKSRWALKEKKFLVHP 421


>gb|EMJ05544.1| hypothetical protein PRUPE_ppa005647mg [Prunus persica]
          Length = 449

 Score =  402 bits (1033), Expect = e-109
 Identities = 213/386 (55%), Positives = 268/386 (69%), Gaps = 1/386 (0%)
 Frame = -3

Query: 1159 DLQEQRSKRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKGLCIRCG 980
            D  E+ +KR+K+E   ++++ +  T    +EE+  +  + K  IC  HPG  K LCI CG
Sbjct: 43   DGSERSTKRRKVENLGSIDETQGSTSQIFVEEN--SEASPKKDICT-HPGSVKDLCIVCG 99

Query: 979  QIEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXNSTRFAD 800
            Q  ++ SGV  GYIHK   L N EI+R+R  D                     NST    
Sbjct: 100  QRVDEKSGVPLGYIHKDFWLNNDEIDRVRSTDIKKSLHLKKLYLVLDLDHTLLNSTHLNH 159

Query: 799  ITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMYIYTMAER 620
            +T++EEYL  Q D ++D  D SLFR+D MHM+TKLRPFV  FLKEAS   EMYIYTM ER
Sbjct: 160  MTAEEEYLHSQTDSLQDVSDGSLFRVDVMHMMTKLRPFVRKFLKEASEMFEMYIYTMGER 219

Query: 619  SYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEAVWHRHKD 440
            +YA+E+AKLLDP K YF  +VI++ D TQ+HQKGLDV+LG ES  +ILDDTE  W +HKD
Sbjct: 220  AYALEMAKLLDPRKEYFGDRVISRDDGTQKHQKGLDVVLGHESAALILDDTENAWTKHKD 279

Query: 439  NLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMFFDPDVAS 260
            NLI MERYHFF SSC QFGF+ KSLS+L  DE E +GALATVL++LKR H MFF  +   
Sbjct: 280  NLILMERYHFFRSSCHQFGFHCKSLSELKSDESEPEGALATVLEVLKRIHNMFF-YESKD 338

Query: 259  DVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSV 80
            ++  RDVR +LK +R+EIL+GC+IVFSRVFPSK  A++H +WKMAE+LGATC TE+D SV
Sbjct: 339  NLIDRDVRQVLKTLRKEILKGCKIVFSRVFPSKFQAENHQLWKMAEQLGATCSTELDLSV 398

Query: 79   THVVSTDTGTQKAHWAA-QKKFLVSP 5
            THVVSTD GT+K+ WA  +KKFLV P
Sbjct: 399  THVVSTDAGTEKSRWAVKEKKFLVHP 424


>ref|XP_006486243.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like isoform X1 [Citrus sinensis]
            gi|568865772|ref|XP_006486244.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 4-like
            isoform X2 [Citrus sinensis]
            gi|568865774|ref|XP_006486245.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 4-like
            isoform X3 [Citrus sinensis]
          Length = 478

 Score =  402 bits (1032), Expect = e-109
 Identities = 212/392 (54%), Positives = 277/392 (70%), Gaps = 1/392 (0%)
 Frame = -3

Query: 1177 KNDKEIDLQEQRSKRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKG 998
            ++DK+++    R KR+K +  +T+++    TL+  +EE   T  + +   CP HPG   G
Sbjct: 58   RDDKDLE----RIKRRKTQIVETIQERPGPTLLGNLEEK--TEVSLEMDNCP-HPGSLGG 110

Query: 997  LCIRCGQIEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXN 818
            +C RCG+  E+ SGV F YI K LRLGN EI+RLR  D                     N
Sbjct: 111  MCYRCGKRLEEESGVTFSYICKGLRLGNDEIDRLRNTDMKHLLRHRKLYLILDLDHTLLN 170

Query: 817  STRFADITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMYI 638
            ST    +T +E+YL  Q D ++D    SLF L  M+M+TKLRPFVH FLKEAS   EMYI
Sbjct: 171  STLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEMFEMYI 230

Query: 637  YTMAERSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEAV 458
            YTM +R YA+E+AKLLDP + YF+++VI++ D TQRHQKGLDV+LG ES V+ILDDTE  
Sbjct: 231  YTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLDVVLGQESAVLILDDTENA 290

Query: 457  WHRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMFF 278
            W +H+DNLI MERYHFFASSCRQFG++ +SLSQL  DE E +GALA+VLK+LKR H +FF
Sbjct: 291  WTKHRDNLILMERYHFFASSCRQFGYHCQSLSQLRSDESELEGALASVLKVLKRIHNIFF 350

Query: 277  DPDVASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYT 98
            D ++A+D++ RDVR +LK +R E+L+GC++VFS VFP+K PA  H +WKMAE+LGATC  
Sbjct: 351  D-ELANDLAGRDVRQVLKMVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCLI 409

Query: 97   EVDPSVTHVVSTDTGTQKAHWAAQK-KFLVSP 5
            E+DPSVTHVVSTD  T+K+ WAA++ KFLV P
Sbjct: 410  ELDPSVTHVVSTDARTEKSRWAAKEAKFLVDP 441


>ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
            gi|223534449|gb|EEF36151.1| RNA polymerase II ctd
            phosphatase, putative [Ricinus communis]
          Length = 478

 Score =  400 bits (1028), Expect = e-109
 Identities = 208/391 (53%), Positives = 270/391 (69%), Gaps = 1/391 (0%)
 Frame = -3

Query: 1174 NDKEIDLQEQRSKRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKGL 995
            +D + D+   R KR ++E  +  E+ +  T V   +  + +S+    V C  HPG F  +
Sbjct: 65   SDDDSDIATNRIKRSRVETLENGENPKESTRVSLDQTLVASSSK---VACT-HPGSFGDM 120

Query: 994  CIRCGQIEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXNS 815
            CI CG+   + +GV FGYIHK LRL N EI RLR  D                     NS
Sbjct: 121  CILCGERLIEETGVTFGYIHKGLRLANDEIVRLRNTDMKNLLRHRKLYLVLDLDHTLLNS 180

Query: 814  TRFADITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMYIY 635
            T+   +T++EEYL  QID M+D  + SLF +D MHM+TKLRPF+  FLKEAS   EMYIY
Sbjct: 181  TQLMHLTAEEEYLKSQIDSMQDVSNGSLFMVDFMHMMTKLRPFIRTFLKEASQMFEMYIY 240

Query: 634  TMAERSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEAVW 455
            TM +R+YA+E+AK LDP + YF+++VI++ D TQRHQKGLD++LG ES V+ILDDTE  W
Sbjct: 241  TMGDRAYALEMAKFLDPGREYFNARVISRDDGTQRHQKGLDIVLGQESAVLILDDTENAW 300

Query: 454  HRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMFFD 275
             +HKDNLI MERYHFFASSCRQFGF  KSLSQL  DE ESDGALA+VLK+L+R H +FFD
Sbjct: 301  TKHKDNLILMERYHFFASSCRQFGFECKSLSQLKSDENESDGALASVLKVLRRIHHIFFD 360

Query: 274  PDVASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTE 95
             ++   +  RDVR +L  +R+++L+GC+IVFSRVFP++  A +H +WKMAE+LGATC  E
Sbjct: 361  -ELEDAIDGRDVRQVLSTVRKDVLKGCKIVFSRVFPTQFQADNHHLWKMAEQLGATCSRE 419

Query: 94   VDPSVTHVVSTDTGTQKAHWAAQK-KFLVSP 5
            VDPSVTHVVS + GT+K+ WA +  KFLV P
Sbjct: 420  VDPSVTHVVSAEAGTEKSRWALKNDKFLVHP 450


>ref|XP_002439741.1| hypothetical protein SORBIDRAFT_09g019310 [Sorghum bicolor]
            gi|241945026|gb|EES18171.1| hypothetical protein
            SORBIDRAFT_09g019310 [Sorghum bicolor]
          Length = 547

 Score =  400 bits (1027), Expect = e-109
 Identities = 220/392 (56%), Positives = 273/392 (69%), Gaps = 5/392 (1%)
 Frame = -3

Query: 1165 EIDLQEQRS-KRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKGLCI 989
            E++  EQ + KR+++E     +  +  T V+P +   G S   +   CP HPG+ +GLC 
Sbjct: 66   EVEAVEQNATKRRRVEE----QHRDQGTSVRPDKIPTGASKNIQVEACP-HPGYIRGLCY 120

Query: 988  RCG--QIEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXNS 815
             CG  Q EE  SGVA  YI K LRL   EI+RLR AD                     NS
Sbjct: 121  ICGNPQDEEYISGVALDYIDKGLRLRTSEIDRLRCADLKNLLRERKLVLILDLDHTLINS 180

Query: 814  TRFADITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMYIY 635
            T+  +I+S E+ L  Q    KDDP+RS+F L++M +LTKLRPFV  FLKEAS+  EMYIY
Sbjct: 181  TKLQNISSAEKDLGIQTAASKDDPNRSIFALESMQLLTKLRPFVREFLKEASNMFEMYIY 240

Query: 634  TMAERSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEAVW 455
            TM +++YA+EIAKLLDP  +YF  KVI+ SDCT+RHQKGLDVILGA S+ VILDDTE VW
Sbjct: 241  TMGDKAYAIEIAKLLDPSNIYFPLKVISNSDCTKRHQKGLDVILGAASVAVILDDTEFVW 300

Query: 454  HRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMFFD 275
             +HK+NLI MERYHFFASSCR+FGF  +SLS+LM+DERESDGALATVL +LKR H +FFD
Sbjct: 301  KKHKENLILMERYHFFASSCREFGFAVRSLSELMQDERESDGALATVLDVLKRIHAIFFD 360

Query: 274  PDV-ASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYT 98
              V   D+S+RDVR ++K +R+EILQGC+IVFSRVFP+ +  Q   +WKMAE LGA C T
Sbjct: 361  MAVETDDLSSRDVRQVIKAVRKEILQGCKIVFSRVFPNNTRPQKQMVWKMAEYLGAVCST 420

Query: 97   EVDPSVTHVVSTDTGTQKAHW-AAQKKFLVSP 5
            +VD SVTHVV+ D GT+KA W  A KKFLV P
Sbjct: 421  DVDSSVTHVVTVDLGTEKARWGVANKKFLVHP 452


>ref|XP_002324546.2| hypothetical protein POPTR_0018s11760g [Populus trichocarpa]
            gi|550318537|gb|EEF03111.2| hypothetical protein
            POPTR_0018s11760g [Populus trichocarpa]
          Length = 468

 Score =  399 bits (1024), Expect = e-108
 Identities = 210/392 (53%), Positives = 270/392 (68%), Gaps = 1/392 (0%)
 Frame = -3

Query: 1177 KNDKEIDLQEQRSKRQKLEGFDTLEDLETETLVKPIEEHIGTSTAGKYVICPPHPGFFKG 998
            + D + D Q +R KR K+E  + +ED    T    ++ +   S + +  IC  HPG F  
Sbjct: 60   EEDDDSDFQRKRVKRSKVETVEIVEDDGGTTSFASLKHNSEASISKE--ICT-HPGSFGT 116

Query: 997  LCIRCGQIEEDGSGVAFGYIHKYLRLGNVEIERLRGADXXXXXXXXXXXXXXXXXXXXXN 818
            +CI CGQ+ +  SGV FGYIHK LRLGN EI RLR  D                     N
Sbjct: 117  MCIVCGQLLDGESGVTFGYIHKGLRLGNDEIVRLRNTDMKNLLRHKKLYLILDLDHTLLN 176

Query: 817  STRFADITSDEEYLFRQIDGMKDDPDRSLFRLDTMHMLTKLRPFVHNFLKEASSFCEMYI 638
            ST+   +T DEEYL  Q D ++D    SLF L +M M+TKLRPFV  FLKEAS   EMYI
Sbjct: 177  STQLMHMTLDEEYLNGQTDSLQDVSKGSLFMLSSMQMMTKLRPFVRTFLKEASQMFEMYI 236

Query: 637  YTMAERSYAMEIAKLLDPDKVYFDSKVITQSDCTQRHQKGLDVILGAESLVVILDDTEAV 458
            YTM +R+YA+E+AKLLDP + YF++KVI++ D TQRHQKGLDV+LG ES V+ILDDTE  
Sbjct: 237  YTMGDRAYALEMAKLLDPGREYFNAKVISRDDGTQRHQKGLDVVLGQESAVLILDDTENA 296

Query: 457  WHRHKDNLIQMERYHFFASSCRQFGFNAKSLSQLMKDERESDGALATVLKILKRTHQMFF 278
            W +HKDNLI MERYHFFASSC QFGFN KSLS+   DE ES+GALA++LK+L++ HQ+FF
Sbjct: 297  WMKHKDNLILMERYHFFASSCHQFGFNCKSLSEQKTDESESEGALASILKVLRKIHQIFF 356

Query: 277  DPDVASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYT 98
            +  + S         +LK +R+++L+GC+IVFSRVFP++S A +H +W+MAE+LGATC T
Sbjct: 357  EDHILS-----LALQVLKTVRKDVLKGCKIVFSRVFPTQSQADNHHLWRMAEQLGATCST 411

Query: 97   EVDPSVTHVVSTDTGTQKAHWAAQ-KKFLVSP 5
            E+DPSVTHVVS D+GT+K+HWA +  KFLV P
Sbjct: 412  ELDPSVTHVVSKDSGTEKSHWALKHNKFLVQP 443