BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00016244
         (270 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864543.1| hypothetical protein ARALYDRAFT_332090 [Arab...   125   4e-27
emb|CBI41034.3| unnamed protein product [Vitis vinifera]              125   4e-27
ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal doma...   125   4e-27
ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal doma...   124   1e-26
emb|CBI35709.3| unnamed protein product [Vitis vinifera]              124   1e-26
gb|EOY32065.1| RNA polymerase II ctd phosphatase, putative isofo...   124   2e-26
gb|EOY32064.1| RNA polymerase II ctd phosphatase, putative isofo...   124   2e-26
dbj|BAB08870.1| unnamed protein product [Arabidopsis thaliana]        123   2e-26
ref|NP_001078764.1| C-terminal domain phosphatase-like 4 [Arabid...   123   2e-26
gb|EMJ05544.1| hypothetical protein PRUPE_ppa005647mg [Prunus pe...   123   3e-26
emb|CAN76945.1| hypothetical protein VITISV_002430 [Vitis vinifera]   122   4e-26
ref|XP_002324547.2| hypothetical protein POPTR_0018s11760g [Popu...   121   8e-26
ref|XP_006280601.1| hypothetical protein CARUB_v10026559mg [Caps...   121   8e-26
ref|XP_006486243.1| PREDICTED: RNA polymerase II C-terminal doma...   121   1e-25
ref|XP_004172979.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   119   4e-25
ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal doma...   119   4e-25
ref|XP_006401141.1| hypothetical protein EUTSA_v10013455mg [Eutr...   118   7e-25
dbj|BAK07377.1| predicted protein [Hordeum vulgare subsp. vulgare]    118   9e-25
gb|EXC26161.1| RNA polymerase II C-terminal domain phosphatase-l...   117   2e-24
gb|AFW77884.1| CPL3 [Zea mays]                                        116   3e-24

>ref|XP_002864543.1| hypothetical protein ARALYDRAFT_332090 [Arabidopsis lyrata subsp.
            lyrata] gi|297310378|gb|EFH40802.1| hypothetical protein
            ARALYDRAFT_332090 [Arabidopsis lyrata subsp. lyrata]
          Length = 1006

 Score =  125 bits (315), Expect = 4e-27
 Identities = 53/84 (63%), Positives = 72/84 (85%)
 Frame = -3

Query: 262  DVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSV 83
            D+S RDVR +LK +R+E+L+GC++VFSRVFP+K+  +DHP+WKMAE LGATC TEVD SV
Sbjct: 889  DISNRDVRSMLKQVRKEVLKGCKVVFSRVFPTKAKPEDHPLWKMAEELGATCATEVDASV 948

Query: 82   THVISTDTGTQKAHWAAQKKKFLV 11
            THV++ D GT+KA WA ++KK++V
Sbjct: 949  THVVAMDVGTEKARWAVREKKYVV 972


>emb|CBI41034.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  125 bits (315), Expect = 4e-27
 Identities = 55/86 (63%), Positives = 74/86 (86%)
 Frame = -3

Query: 262 DVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSV 83
           D S RDVR ++K +R+E+L+GC+IVFSRVFP++  A++H +W+MAE+LGATC TE+DPSV
Sbjct: 153 DFSGRDVRQVVKRVRKEVLKGCKIVFSRVFPTRFQAENHHLWRMAEQLGATCATELDPSV 212

Query: 82  THVISTDTGTQKAHWAAQKKKFLVSP 5
           THV+STD GT+K+ WA Q+KKFLV P
Sbjct: 213 THVVSTDAGTEKSRWALQEKKFLVHP 238


>ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score =  125 bits (315), Expect = 4e-27
 Identities = 55/86 (63%), Positives = 74/86 (86%)
 Frame = -3

Query: 262 DVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSV 83
           D S RDVR ++K +R+E+L+GC+IVFSRVFP++  A++H +W+MAE+LGATC TE+DPSV
Sbjct: 167 DFSGRDVRQVVKRVRKEVLKGCKIVFSRVFPTRFQAENHHLWRMAEQLGATCATELDPSV 226

Query: 82  THVISTDTGTQKAHWAAQKKKFLVSP 5
           THV+STD GT+K+ WA Q+KKFLV P
Sbjct: 227 THVVSTDAGTEKSRWALQEKKFLVHP 252


>ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score =  124 bits (312), Expect = 1e-26
 Identities = 54/86 (62%), Positives = 74/86 (86%)
 Frame = -3

Query: 262 DVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSV 83
           D S RDVR ++K +R+++L+GC+IVFSRVFP++  A++H +W+MAE+LGATC TE+DPSV
Sbjct: 167 DFSGRDVRQVVKRVRKDVLKGCKIVFSRVFPTRFQAENHHLWRMAEQLGATCATELDPSV 226

Query: 82  THVISTDTGTQKAHWAAQKKKFLVSP 5
           THV+STD GT+K+ WA Q+KKFLV P
Sbjct: 227 THVVSTDAGTEKSRWALQEKKFLVHP 252


>emb|CBI35709.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  124 bits (312), Expect = 1e-26
 Identities = 54/86 (62%), Positives = 74/86 (86%)
 Frame = -3

Query: 262 DVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSV 83
           D S RDVR ++K +R+++L+GC+IVFSRVFP++  A++H +W+MAE+LGATC TE+DPSV
Sbjct: 153 DFSGRDVRQVVKRVRKDVLKGCKIVFSRVFPTRFQAENHHLWRMAEQLGATCATELDPSV 212

Query: 82  THVISTDTGTQKAHWAAQKKKFLVSP 5
           THV+STD GT+K+ WA Q+KKFLV P
Sbjct: 213 THVVSTDAGTEKSRWALQEKKFLVHP 238


>gb|EOY32065.1| RNA polymerase II ctd phosphatase, putative isoform 2 [Theobroma
           cacao]
          Length = 357

 Score =  124 bits (310), Expect = 2e-26
 Identities = 53/86 (61%), Positives = 73/86 (84%)
 Frame = -3

Query: 262 DVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSV 83
           ++++RDVR +LK +++E+L+GC+IVFS VFP+  PA+ HP+WKMAE+LGATC TE D SV
Sbjct: 246 NLASRDVRQVLKTVQEEVLKGCKIVFSHVFPTNFPAESHPLWKMAEQLGATCSTETDLSV 305

Query: 82  THVISTDTGTQKAHWAAQKKKFLVSP 5
           THV+STD GT+K+ WA ++KKFLV P
Sbjct: 306 THVVSTDAGTEKSRWAVKEKKFLVHP 331


>gb|EOY32064.1| RNA polymerase II ctd phosphatase, putative isoform 1 [Theobroma
           cacao]
          Length = 469

 Score =  124 bits (310), Expect = 2e-26
 Identities = 53/86 (61%), Positives = 73/86 (84%)
 Frame = -3

Query: 262 DVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSV 83
           ++++RDVR +LK +++E+L+GC+IVFS VFP+  PA+ HP+WKMAE+LGATC TE D SV
Sbjct: 358 NLASRDVRQVLKTVQEEVLKGCKIVFSHVFPTNFPAESHPLWKMAEQLGATCSTETDLSV 417

Query: 82  THVISTDTGTQKAHWAAQKKKFLVSP 5
           THV+STD GT+K+ WA ++KKFLV P
Sbjct: 418 THVVSTDAGTEKSRWAVKEKKFLVHP 443


>dbj|BAB08870.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1065

 Score =  123 bits (309), Expect = 2e-26
 Identities = 54/83 (65%), Positives = 71/83 (85%)
 Frame = -3

Query: 259  VSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSVT 80
            +S RDVR +LK +R+EIL+GC+IVFSRVFP+K+  +DHP+WKMAE LGATC TEVD SVT
Sbjct: 950  ISNRDVRLMLKQVRKEILKGCKIVFSRVFPTKAKPEDHPLWKMAEELGATCATEVDASVT 1009

Query: 79   HVISTDTGTQKAHWAAQKKKFLV 11
            HV++ D GT+KA WA ++KK++V
Sbjct: 1010 HVVAMDVGTEKARWAVREKKYVV 1032


>ref|NP_001078764.1| C-terminal domain phosphatase-like 4 [Arabidopsis thaliana]
           gi|122154038|sp|Q00IB6.1|CPL4_ARATH RecName: Full=RNA
           polymerase II C-terminal domain phosphatase-like 4;
           Short=FCP-like 4; AltName: Full=Carboxyl-terminal
           phosphatase-like 4; Short=AtCPL4; Short=CTD
           phosphatase-like 4 gi|95115186|gb|ABF55959.1|
           carboxyl-terminal phosphatase-like 4 [Arabidopsis
           thaliana] gi|332009601|gb|AED96984.1| C-terminal domain
           phosphatase-like 4 [Arabidopsis thaliana]
          Length = 440

 Score =  123 bits (309), Expect = 2e-26
 Identities = 54/83 (65%), Positives = 71/83 (85%)
 Frame = -3

Query: 259 VSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSVT 80
           +S RDVR +LK +R+EIL+GC+IVFSRVFP+K+  +DHP+WKMAE LGATC TEVD SVT
Sbjct: 325 ISNRDVRLMLKQVRKEILKGCKIVFSRVFPTKAKPEDHPLWKMAEELGATCATEVDASVT 384

Query: 79  HVISTDTGTQKAHWAAQKKKFLV 11
           HV++ D GT+KA WA ++KK++V
Sbjct: 385 HVVAMDVGTEKARWAVREKKYVV 407


>gb|EMJ05544.1| hypothetical protein PRUPE_ppa005647mg [Prunus persica]
          Length = 449

 Score =  123 bits (308), Expect = 3e-26
 Identities = 56/82 (68%), Positives = 71/82 (86%)
 Frame = -3

Query: 250 RDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSVTHVI 71
           RDVR +LK +R+EIL+GC+IVFSRVFPSK  A++H +WKMAE+LGATC TE+D SVTHV+
Sbjct: 343 RDVRQVLKTLRKEILKGCKIVFSRVFPSKFQAENHQLWKMAEQLGATCSTELDLSVTHVV 402

Query: 70  STDTGTQKAHWAAQKKKFLVSP 5
           STD GT+K+ WA ++KKFLV P
Sbjct: 403 STDAGTEKSRWAVKEKKFLVHP 424


>emb|CAN76945.1| hypothetical protein VITISV_002430 [Vitis vinifera]
          Length = 641

 Score =  122 bits (307), Expect = 4e-26
 Identities = 53/85 (62%), Positives = 74/85 (87%)
 Frame = -3

Query: 262 DVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSV 83
           D S RDVR ++K +R+++L+GC+IVFSRVFP++  A++H +W+MAE+LGATC TE+DPSV
Sbjct: 153 DFSGRDVRQVVKRVRKDVLKGCKIVFSRVFPTRFQAENHHLWRMAEQLGATCATELDPSV 212

Query: 82  THVISTDTGTQKAHWAAQKKKFLVS 8
           THV+STD GT+K+ WA Q+KKFLV+
Sbjct: 213 THVVSTDAGTEKSRWALQEKKFLVA 237


>ref|XP_002324547.2| hypothetical protein POPTR_0018s11760g [Populus trichocarpa]
           gi|550318538|gb|EEF03112.2| hypothetical protein
           POPTR_0018s11760g [Populus trichocarpa]
          Length = 472

 Score =  121 bits (304), Expect = 8e-26
 Identities = 52/82 (63%), Positives = 71/82 (86%)
 Frame = -3

Query: 250 RDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSVTHVI 71
           RDVR +LK +R+++L+GC+IVFSRVFP++S A +H +W+MAE+LGATC TE+DPSVTHV+
Sbjct: 366 RDVRQVLKTVRKDVLKGCKIVFSRVFPTQSQADNHHLWRMAEQLGATCSTELDPSVTHVV 425

Query: 70  STDTGTQKAHWAAQKKKFLVSP 5
           S D+GT+K+HWA +  KFLV P
Sbjct: 426 SKDSGTEKSHWALKHNKFLVQP 447


>ref|XP_006280601.1| hypothetical protein CARUB_v10026559mg [Capsella rubella]
           gi|565433358|ref|XP_006280602.1| hypothetical protein
           CARUB_v10026559mg [Capsella rubella]
           gi|482549305|gb|EOA13499.1| hypothetical protein
           CARUB_v10026559mg [Capsella rubella]
           gi|482549306|gb|EOA13500.1| hypothetical protein
           CARUB_v10026559mg [Capsella rubella]
          Length = 393

 Score =  121 bits (304), Expect = 8e-26
 Identities = 52/84 (61%), Positives = 71/84 (84%)
 Frame = -3

Query: 262 DVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSV 83
           D+S +DVR +LK +R+EIL+GC++VFSRVFP+K+  +DHP+WKMAE LGATC TEVD SV
Sbjct: 276 DISNKDVRLMLKQVRKEILKGCKVVFSRVFPTKAKPEDHPLWKMAEELGATCATEVDASV 335

Query: 82  THVISTDTGTQKAHWAAQKKKFLV 11
           THV++ + GT+KA W  ++KKF+V
Sbjct: 336 THVVAMEMGTEKARWGLREKKFVV 359


>ref|XP_006486243.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like isoform X1 [Citrus sinensis]
           gi|568865772|ref|XP_006486244.1| PREDICTED: RNA
           polymerase II C-terminal domain phosphatase-like 4-like
           isoform X2 [Citrus sinensis]
           gi|568865774|ref|XP_006486245.1| PREDICTED: RNA
           polymerase II C-terminal domain phosphatase-like 4-like
           isoform X3 [Citrus sinensis]
          Length = 478

 Score =  121 bits (303), Expect = 1e-25
 Identities = 54/88 (61%), Positives = 72/88 (81%)
 Frame = -3

Query: 268 ASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDP 89
           A+D++ RDVR +LK +R E+L+GC++VFS VFP+K PA  H +WKMAE+LGATC  E+DP
Sbjct: 354 ANDLAGRDVRQVLKMVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCLIELDP 413

Query: 88  SVTHVISTDTGTQKAHWAAQKKKFLVSP 5
           SVTHV+STD  T+K+ WAA++ KFLV P
Sbjct: 414 SVTHVVSTDARTEKSRWAAKEAKFLVDP 441


>ref|XP_004172979.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 4-like, partial [Cucumis sativus]
          Length = 340

 Score =  119 bits (298), Expect = 4e-25
 Identities = 51/88 (57%), Positives = 71/88 (80%)
 Frame = -3

Query: 268 ASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDP 89
           + D+  RDVR +LK +R E+L+GC++VFSRVFP+K  A++H +WKM E+LG TC TE+D 
Sbjct: 222 SGDLVDRDVRQVLKTVRAEVLEGCKVVFSRVFPTKFQAENHQLWKMVEQLGGTCSTELDQ 281

Query: 88  SVTHVISTDTGTQKAHWAAQKKKFLVSP 5
           SVTHV++TD GT+K+ WA ++KKFLV P
Sbjct: 282 SVTHVVATDAGTEKSRWALKEKKFLVHP 309


>ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Cucumis sativus]
          Length = 452

 Score =  119 bits (298), Expect = 4e-25
 Identities = 51/88 (57%), Positives = 71/88 (80%)
 Frame = -3

Query: 268 ASDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDP 89
           + D+  RDVR +LK +R E+L+GC++VFSRVFP+K  A++H +WKM E+LG TC TE+D 
Sbjct: 334 SGDLVDRDVRQVLKTVRAEVLEGCKVVFSRVFPTKFQAENHQLWKMVEQLGGTCSTELDQ 393

Query: 88  SVTHVISTDTGTQKAHWAAQKKKFLVSP 5
           SVTHV++TD GT+K+ WA ++KKFLV P
Sbjct: 394 SVTHVVATDAGTEKSRWALKEKKFLVHP 421


>ref|XP_006401141.1| hypothetical protein EUTSA_v10013455mg [Eutrema salsugineum]
           gi|557102231|gb|ESQ42594.1| hypothetical protein
           EUTSA_v10013455mg [Eutrema salsugineum]
          Length = 467

 Score =  118 bits (296), Expect = 7e-25
 Identities = 51/83 (61%), Positives = 70/83 (84%)
 Frame = -3

Query: 256 STRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSVTH 77
           S RDVR LLK +R+++L+GC++VFSRVFP+KS  +DHP+W++AE LGATC TEVD SVTH
Sbjct: 345 SGRDVRTLLKQVRKQVLEGCKVVFSRVFPTKSEPKDHPLWRIAEGLGATCATEVDASVTH 404

Query: 76  VISTDTGTQKAHWAAQKKKFLVS 8
           V++ D GT+K  WA ++KKF+V+
Sbjct: 405 VVAMDVGTEKVRWAIREKKFVVN 427


>dbj|BAK07377.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 488

 Score =  118 bits (295), Expect = 9e-25
 Identities = 53/85 (62%), Positives = 69/85 (81%)
 Frame = -3

Query: 259 VSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSVT 80
           +S+RDVR ++K +RQE+LQGC++VFSRVFPS   +QD  +WKMAE+LGA C +EVDPSVT
Sbjct: 365 LSSRDVRQVIKRVRQEVLQGCKLVFSRVFPSDCRSQDQIMWKMAEQLGAVCCSEVDPSVT 424

Query: 79  HVISTDTGTQKAHWAAQKKKFLVSP 5
           HV++   GT+KA WAA  KKFL+ P
Sbjct: 425 HVVAVHAGTEKARWAAGNKKFLLHP 449


>gb|EXC26161.1| RNA polymerase II C-terminal domain phosphatase-like 4 [Morus
           notabilis]
          Length = 512

 Score =  117 bits (292), Expect = 2e-24
 Identities = 51/82 (62%), Positives = 69/82 (84%)
 Frame = -3

Query: 250 RDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPSVTHVI 71
           RDVR +LK +R+E+L+GC+IVFSRVFP++  A++H +WKMAE+LGATC  E+DPSVTHV+
Sbjct: 405 RDVRQVLKTLRKEVLKGCKIVFSRVFPTEFQAENHQLWKMAEQLGATCGIELDPSVTHVV 464

Query: 70  STDTGTQKAHWAAQKKKFLVSP 5
           S D GT+K+ WA ++ KFLV P
Sbjct: 465 SLDVGTEKSRWAVKENKFLVHP 486


>gb|AFW77884.1| CPL3 [Zea mays]
          Length = 533

 Score =  116 bits (291), Expect = 3e-24
 Identities = 51/87 (58%), Positives = 68/87 (78%)
 Frame = -3

Query: 265 SDVSTRDVRPLLKGIRQEILQGCRIVFSRVFPSKSPAQDHPIWKMAERLGATCYTEVDPS 86
           +D+S+RD+R ++K +R+EILQGC+IVFSRVFP+ +  Q+  +WKMAE LGA C  +VDPS
Sbjct: 361 TDLSSRDIRQVIKTLRKEILQGCKIVFSRVFPNNTRPQEQMVWKMAEYLGAVCVKDVDPS 420

Query: 85  VTHVISTDTGTQKAHWAAQKKKFLVSP 5
           VTHV++ D GT+KA W    KKFLV P
Sbjct: 421 VTHVVTVDLGTEKARWGLNNKKFLVHP 447