BLASTX nr result
ID: Zingiber23_contig00016212
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00016212
(893 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004976579.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 94 5e-17
ref|XP_003580376.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 93 1e-16
dbj|BAK02114.1| predicted protein [Hordeum vulgare subsp. vulgare] 93 2e-16
ref|XP_002448374.1| hypothetical protein SORBIDRAFT_06g026220 [S... 91 7e-16
ref|NP_001147218.1| RING zinc finger protein-like [Zea mays] gi|... 90 1e-15
ref|XP_006652684.1| PREDICTED: RING-H2 finger protein ATL11-like... 90 1e-15
gb|AFW59117.1| putative RING zinc finger domain superfamily prot... 89 2e-15
dbj|BAJ95364.1| predicted protein [Hordeum vulgare subsp. vulgare] 89 2e-15
gb|EAZ31735.1| hypothetical protein OsJ_15887 [Oryza sativa Japo... 89 3e-15
ref|NP_001053644.1| Os04g0579200 [Oryza sativa Japonica Group] g... 89 3e-15
ref|XP_004510759.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 88 4e-15
ref|NP_001150789.1| RING zinc finger protein-like [Zea mays] gi|... 88 4e-15
ref|XP_004953456.1| PREDICTED: probable E3 ubiquitin-protein lig... 88 5e-15
gb|EAY95267.1| hypothetical protein OsI_17090 [Oryza sativa Indi... 88 5e-15
ref|XP_006439498.1| hypothetical protein CICLE_v10024600mg [Citr... 87 6e-15
ref|NP_001047745.1| Os02g0681200 [Oryza sativa Japonica Group] g... 87 1e-14
ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 87 1e-14
gb|EAY87081.1| hypothetical protein OsI_08479 [Oryza sativa Indi... 87 1e-14
gb|EMJ19724.1| hypothetical protein PRUPE_ppa012584mg [Prunus pe... 86 1e-14
gb|ACR37714.1| unknown [Zea mays] gi|413938259|gb|AFW72810.1| pu... 86 1e-14
>ref|XP_004976579.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Setaria italica]
Length = 218
Score = 94.4 bits (233), Expect = 5e-17
Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Frame = +2
Query: 299 ALAVDRALPATRYD---GDCDGRGSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRWVE 469
A+ ++ LP R+D C G G CA+CL G+ VR+LS+CRH FHRGCLDRW+E
Sbjct: 93 AMVIEEVLPVVRFDELAAACAG-GGDCAVCLSGIGGGDEVRRLSNCRHAFHRGCLDRWME 151
Query: 470 HGRSTCPLCRAPLVSD----LAWDAAPHAYHDDDCD 565
H + TCPLCRAPL+ D W AA D D
Sbjct: 152 HDQRTCPLCRAPLIPDEMAGALWAAAAGVPDASDFD 187
>ref|XP_003580376.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Brachypodium
distachyon]
Length = 216
Score = 93.2 bits (230), Expect = 1e-16
Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +2
Query: 296 TALAVDRALPATRYDGDCDGR--GSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRWVE 469
+AL ++ LP RYD + G CA+CL G+ VR+L++CRH FHR CLDRW+E
Sbjct: 88 SALVIEEVLPVVRYDELAPAQCGGGDCAVCLSGIGGGDEVRRLTNCRHAFHRACLDRWME 147
Query: 470 HGRSTCPLCRAPLVSDLAWDAAPHA 544
H + TCPLCRAPL+ D A HA
Sbjct: 148 HDQRTCPLCRAPLIPDEMAGALCHA 172
>dbj|BAK02114.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 92.8 bits (229), Expect = 2e-16
Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Frame = +2
Query: 296 TALAVDRALPATRYDGDCDGRG---SGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRWV 466
TA+ ++ LP R+D + D CA+CL G+ VR+L++CRH FHRGCLDRW+
Sbjct: 81 TAMVIEEVLPVVRFD-ELDAAACVDGDCAVCLSGIGGGDEVRRLTNCRHAFHRGCLDRWM 139
Query: 467 EHGRSTCPLCRAPLVSD----LAWDAAPHAYHDDDCDDF-----APTTRAML 595
EH + TCPLCRAPL+ D W +A D D F PTT +L
Sbjct: 140 EHDQRTCPLCRAPLIPDDMAGALWASAAGVPDASDFDFFYLGASVPTTPTLL 191
>ref|XP_002448374.1| hypothetical protein SORBIDRAFT_06g026220 [Sorghum bicolor]
gi|241939557|gb|EES12702.1| hypothetical protein
SORBIDRAFT_06g026220 [Sorghum bicolor]
Length = 194
Score = 90.5 bits (223), Expect = 7e-16
Identities = 44/94 (46%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Frame = +2
Query: 299 ALAVDRALPATRYDGDCDGR-GSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRWVEHG 475
A+ ++ LP R+D + R G CA+CL + VR+LS+CRHVFHR CLDRW+EH
Sbjct: 68 AMVIEEVLPVVRFDELEEARVGGDCAVCLSGIGGRDEVRRLSNCRHVFHRACLDRWMEHD 127
Query: 476 RSTCPLCRAPLVSD----LAWDAAPHAYHDDDCD 565
+ TCPLCRAPL+ D W AA D D
Sbjct: 128 QRTCPLCRAPLIPDEMAGALWAAAAGVPDASDFD 161
>ref|NP_001147218.1| RING zinc finger protein-like [Zea mays]
gi|195608648|gb|ACG26154.1| RING zinc finger
protein-like [Zea mays] gi|413923449|gb|AFW63381.1|
putative RING zinc finger domain superfamily protein
[Zea mays]
Length = 220
Score = 90.1 bits (222), Expect = 1e-15
Identities = 45/96 (46%), Positives = 55/96 (57%), Gaps = 16/96 (16%)
Frame = +2
Query: 299 ALAVDRALPATRYD-----------GDCDGRGSGCAICLCEFEQGEAVRKLSDCRHVFHR 445
A+ ++ ALP R+D GDCD CA+CL G+ VR+L +CRH FHR
Sbjct: 86 AVRIEEALPVVRFDELAAAARGDGYGDCD---CDCAVCLDGIGGGDEVRRLGNCRHAFHR 142
Query: 446 GCLDRWVEHGRSTCPLCRAPLVSDLA-----WDAAP 538
CLDRW+ HG+ TCPLCRAPLV A W AP
Sbjct: 143 ACLDRWMAHGQRTCPLCRAPLVPGAAAAGDPWAEAP 178
>ref|XP_006652684.1| PREDICTED: RING-H2 finger protein ATL11-like, partial [Oryza
brachyantha]
Length = 183
Score = 89.7 bits (221), Expect = 1e-15
Identities = 45/93 (48%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = +2
Query: 299 ALAVDRALPATRYDGDCDGRGSG-CAICLCEFEQGEAVRKLSDCRHVFHRGCLDRWVEH- 472
A+ ++ LP R+D G G CA+CL G+ VR+L++CRHVFHRGCLDRW+EH
Sbjct: 59 AMVIEEVLPVVRFDELATVCGGGDCAVCLSGIGGGDEVRRLTNCRHVFHRGCLDRWMEHD 118
Query: 473 GRSTCPLCRAPLVSDLAWDAAPHAYHDDDCDDF 571
+ TCPLCRAPL+ D A A D DF
Sbjct: 119 DQRTCPLCRAPLIPDEMAGALWAAAGVPDASDF 151
>gb|AFW59117.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 187
Score = 89.0 bits (219), Expect = 2e-15
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Frame = +2
Query: 299 ALAVDRALPATRYDGDCDGR---GSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRWVE 469
A+ ++ ALP R+D + + R G CA+CL G+ VR+L +CRH FHR CLDRW+E
Sbjct: 69 AMVIEEALPVARFD-ELEARVVVGGDCAVCLGGIGGGDEVRRLGNCRHAFHRACLDRWME 127
Query: 470 HGRSTCPLCRAPLVSDLA-WDA 532
H + TCPLCRAPL+ A W A
Sbjct: 128 HDQRTCPLCRAPLIPGAALWPA 149
>dbj|BAJ95364.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 207
Score = 89.0 bits (219), Expect = 2e-15
Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 10/79 (12%)
Frame = +2
Query: 305 AVDRALPATRYD----------GDCDGRGSGCAICLCEFEQGEAVRKLSDCRHVFHRGCL 454
AV+ ALP R+D GD D CA+CLC G+ VR+LS+CRHVFHRGC+
Sbjct: 88 AVEEALPVLRFDELLASSPSVCGDGD-----CAVCLCGIGGGDEVRRLSNCRHVFHRGCI 142
Query: 455 DRWVEHGRSTCPLCRAPLV 511
DRW+ H + TCPLCRAPL+
Sbjct: 143 DRWMGHRQRTCPLCRAPLM 161
>gb|EAZ31735.1| hypothetical protein OsJ_15887 [Oryza sativa Japonica Group]
Length = 212
Score = 88.6 bits (218), Expect = 3e-15
Identities = 45/97 (46%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Frame = +2
Query: 299 ALAVDRALPATRYD-----GDCDGRGSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRW 463
A+ ++ LP R+D G CA+CL G+ VR+LS+CRHVFHRGCLDRW
Sbjct: 84 AMVIEEVLPVVRFDELVAAAPAVCGGGDCAVCLSGIGGGDEVRRLSNCRHVFHRGCLDRW 143
Query: 464 VEH-GRSTCPLCRAPLVSDLAWDAAPHAYHDDDCDDF 571
+EH + TCPLCRAPL+ D A A D DF
Sbjct: 144 MEHDDQRTCPLCRAPLIPDEMASALWAAAGVPDASDF 180
>ref|NP_001053644.1| Os04g0579200 [Oryza sativa Japonica Group]
gi|32488512|emb|CAE03264.1| OSJNBa0011J08.19 [Oryza
sativa Japonica Group] gi|113565215|dbj|BAF15558.1|
Os04g0579200 [Oryza sativa Japonica Group]
gi|215713537|dbj|BAG94674.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 212
Score = 88.6 bits (218), Expect = 3e-15
Identities = 45/97 (46%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Frame = +2
Query: 299 ALAVDRALPATRYD-----GDCDGRGSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRW 463
A+ ++ LP R+D G CA+CL G+ VR+LS+CRHVFHRGCLDRW
Sbjct: 84 AMVIEEVLPVVRFDELVAAAPAVCGGGDCAVCLSGIGGGDEVRRLSNCRHVFHRGCLDRW 143
Query: 464 VEH-GRSTCPLCRAPLVSDLAWDAAPHAYHDDDCDDF 571
+EH + TCPLCRAPL+ D A A D DF
Sbjct: 144 MEHDDQRTCPLCRAPLIPDEMASALWAAAGVPDASDF 180
>ref|XP_004510759.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Cicer arietinum]
Length = 173
Score = 88.2 bits (217), Expect = 4e-15
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Frame = +2
Query: 296 TALAVDRALPATRYDGDCDG--RGSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRWVE 469
+AL + LPA+++ GD G G CA+CL EF + E +R L +CRH+FHR C+DRW++
Sbjct: 69 SALLIQELLPASKF-GDLVGVEEGCCCAVCLFEFSEEEEIRCLRNCRHIFHRNCVDRWID 127
Query: 470 HGRSTCPLCRAPLVSD 517
H + TCPLCR P V D
Sbjct: 128 HDQKTCPLCRTPFVPD 143
>ref|NP_001150789.1| RING zinc finger protein-like [Zea mays]
gi|195641850|gb|ACG40393.1| RING zinc finger
protein-like [Zea mays] gi|414585776|tpg|DAA36347.1|
TPA: putative RING zinc finger domain superfamily
protein [Zea mays]
Length = 213
Score = 88.2 bits (217), Expect = 4e-15
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Frame = +2
Query: 299 ALAVDRALPATRYDG-DCDGRGSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRWVEHG 475
A+ ++ LP R+D + + CA+CL + VR+LS+CRHVFHR CLDRW+EH
Sbjct: 89 AMVIEEVLPVVRFDELELEPEPGDCAVCLSGIGGRDEVRRLSNCRHVFHRACLDRWMEHD 148
Query: 476 RSTCPLCRAPLVSD----LAWDAAPHAYHDDDCD 565
+ TCPLCRAPL+ D W AA D D
Sbjct: 149 QRTCPLCRAPLIPDEMAGALWAAAAGVPDASDFD 182
>ref|XP_004953456.1| PREDICTED: probable E3 ubiquitin-protein ligase RHA2B-like [Setaria
italica]
Length = 212
Score = 87.8 bits (216), Expect = 5e-15
Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Frame = +2
Query: 299 ALAVDRALPATRYD---GDCDGRGSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRWVE 469
A+ ++ ALP R++ G G G CA+CL G+ VR+LS+CRH FHRGCLD W+
Sbjct: 85 AVHIEEALPVVRFEELAGTACG-GGDCAVCLSGIGAGDEVRRLSNCRHAFHRGCLDHWMA 143
Query: 470 HGRSTCPLCRAPLVSDLAWDAA 535
H + TCPLCRAPL+ A AA
Sbjct: 144 HDQRTCPLCRAPLIPGAAGAAA 165
>gb|EAY95267.1| hypothetical protein OsI_17090 [Oryza sativa Indica Group]
Length = 212
Score = 87.8 bits (216), Expect = 5e-15
Identities = 45/97 (46%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Frame = +2
Query: 299 ALAVDRALPATRYD-----GDCDGRGSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRW 463
A+ ++ LP R+D G CA+CL G+ VR+LS+CRHVFHRGCLDRW
Sbjct: 84 AMVIEEVLPVVRFDELVAAAPAVCGGGDCAVCLSGIGGGDEVRRLSNCRHVFHRGCLDRW 143
Query: 464 VEH-GRSTCPLCRAPLVSDLAWDAAPHAYHDDDCDDF 571
+EH + TCPLCRAPL+ D A A D DF
Sbjct: 144 MEHDDQRTCPLCRAPLIPDEMAGALWAAAGVPDTSDF 180
>ref|XP_006439498.1| hypothetical protein CICLE_v10024600mg [Citrus clementina]
gi|568845310|ref|XP_006476519.1| PREDICTED: E3
ubiquitin-protein ligase RHA1B-like [Citrus sinensis]
gi|557541760|gb|ESR52738.1| hypothetical protein
CICLE_v10024600mg [Citrus clementina]
Length = 171
Score = 87.4 bits (215), Expect = 6e-15
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 9/105 (8%)
Frame = +2
Query: 296 TALAVDRALPATRYDGDCDGRGSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRWVEHG 475
+AL + LP ++ D S CA+CL EFE+ + +R+L++CRH+FHRGCLDRW+ +
Sbjct: 65 SALLIREILPVVKFSELVDPPDS-CAVCLYEFEEQDEIRRLTNCRHIFHRGCLDRWMAYD 123
Query: 476 RSTCPLCRAPLVSD--------LAWDAAP-HAYHDDDCDDFAPTT 583
+ TCPLCR P + D W A+ ++DDD F+ T
Sbjct: 124 QKTCPLCRTPFIPDDMQDSFNERLWAASGIPEFYDDDPPHFSQVT 168
>ref|NP_001047745.1| Os02g0681200 [Oryza sativa Japonica Group]
gi|50253143|dbj|BAD29389.1| putative BRH1 RING finger
protein [Oryza sativa Japonica Group]
gi|113537276|dbj|BAF09659.1| Os02g0681200 [Oryza sativa
Japonica Group] gi|125583259|gb|EAZ24190.1| hypothetical
protein OsJ_07936 [Oryza sativa Japonica Group]
gi|215679003|dbj|BAG96433.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215701306|dbj|BAG92730.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215708791|dbj|BAG94060.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 212
Score = 86.7 bits (213), Expect = 1e-14
Identities = 43/94 (45%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Frame = +2
Query: 302 LAVDRALPATRYDGDCDGR------GSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRW 463
+A++ ALP R+D G CA+CL + VR+LS+CRHVFHRGCLDRW
Sbjct: 88 MAIEEALPVVRFDELVASAPAAVCGGGDCAVCLSGICGRDEVRRLSNCRHVFHRGCLDRW 147
Query: 464 VEHGRSTCPLCRAPLVSDLAWDAAPHAYHDDDCD 565
+ H + TCPLCRAPL+ D AA D D
Sbjct: 148 MAHEQRTCPLCRAPLIPDELLPAASGLPDPSDYD 181
>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
Length = 167
Score = 86.7 bits (213), Expect = 1e-14
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Frame = +2
Query: 296 TALAVDRALPATRY-DGDCDGRG-SGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRWVE 469
+A+ + LP ++ + C G CA+CL +FE GE +R+L++C+H+FHR CLDRW++
Sbjct: 63 SAVLIREILPVMKFGEAVCGGDAPESCAVCLYDFEVGEEIRRLTNCKHIFHRSCLDRWMD 122
Query: 470 HGRSTCPLCRAPLVSD 517
H + TCPLCR P V D
Sbjct: 123 HDQKTCPLCRTPFVPD 138
>gb|EAY87081.1| hypothetical protein OsI_08479 [Oryza sativa Indica Group]
Length = 212
Score = 86.7 bits (213), Expect = 1e-14
Identities = 43/94 (45%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Frame = +2
Query: 302 LAVDRALPATRYDGDCDGR------GSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRW 463
+A++ ALP R+D G CA+CL + VR+LS+CRHVFHRGCLDRW
Sbjct: 88 MAIEEALPVVRFDELVASAPAAVCGGGDCAVCLSGICGRDEVRRLSNCRHVFHRGCLDRW 147
Query: 464 VEHGRSTCPLCRAPLVSDLAWDAAPHAYHDDDCD 565
+ H + TCPLCRAPL+ D AA D D
Sbjct: 148 MAHEQRTCPLCRAPLIPDELLPAASGLPDPSDYD 181
>gb|EMJ19724.1| hypothetical protein PRUPE_ppa012584mg [Prunus persica]
Length = 163
Score = 86.3 bits (212), Expect = 1e-14
Identities = 35/74 (47%), Positives = 48/74 (64%)
Frame = +2
Query: 296 TALAVDRALPATRYDGDCDGRGSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRWVEHG 475
+AL + LP ++ R CA+CL EFE E +R L++C+H+FHR CLDRW++H
Sbjct: 63 SALLIREFLPVIKFRDLAGDRPENCAVCLYEFEVEEEIRCLTNCKHIFHRACLDRWMDHD 122
Query: 476 RSTCPLCRAPLVSD 517
+ TCPLCR P V D
Sbjct: 123 QKTCPLCRTPFVPD 136
>gb|ACR37714.1| unknown [Zea mays] gi|413938259|gb|AFW72810.1| putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 199
Score = 86.3 bits (212), Expect = 1e-14
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Frame = +2
Query: 299 ALAVDRALPATRYDGDCDGR--GSGCAICLCEFEQGEAVRKLSDCRHVFHRGCLDRWVEH 472
A ++ ALP R+D C G CA+CL G+ VR+L +CRH FHR CLDRW+ H
Sbjct: 89 AALIEEALPVVRFDELCGAACGGGDCAVCLGGIGGGDEVRRLGNCRHAFHRACLDRWMAH 148
Query: 473 GRSTCPLCRAPLV 511
+ TCPLCRAPL+
Sbjct: 149 DQRTCPLCRAPLI 161