BLASTX nr result
ID: Zingiber23_contig00016057
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00016057
(234 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI34696.3| unnamed protein product [Vitis vinifera] 98 1e-18
ref|XP_002271357.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 98 1e-18
emb|CBI40324.3| unnamed protein product [Vitis vinifera] 94 1e-17
ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 94 1e-17
ref|XP_006341720.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 92 6e-17
ref|XP_004248580.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 92 6e-17
gb|EAY94957.1| hypothetical protein OsI_16765 [Oryza sativa Indi... 91 2e-16
ref|NP_001053408.1| Os04g0533000 [Oryza sativa Japonica Group] g... 91 2e-16
ref|XP_004133869.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 90 4e-16
ref|XP_002320116.2| hypothetical protein POPTR_0014s07690g [Popu... 89 5e-16
ref|XP_002301349.1| DEAD/DEAH box helicase family protein [Popul... 89 5e-16
ref|XP_006848084.1| hypothetical protein AMTR_s00029p00205680 [A... 89 8e-16
ref|XP_003528863.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 89 8e-16
ref|XP_003528862.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 89 8e-16
ref|XP_002511831.1| dead box ATP-dependent RNA helicase, putativ... 89 8e-16
gb|EOX96017.1| DEAD-box ATP-dependent RNA helicase 8 isoform 3, ... 87 2e-15
gb|EOX96016.1| RNAhelicase-like 8 isoform 2, partial [Theobroma ... 87 2e-15
gb|EOX96015.1| RNAhelicase-like 8 isoform 1 [Theobroma cacao] 87 2e-15
ref|XP_006576347.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 87 3e-15
ref|XP_006652567.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 86 7e-15
>emb|CBI34696.3| unnamed protein product [Vitis vinifera]
Length = 438
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/61 (73%), Positives = 50/61 (81%)
Frame = -3
Query: 184 WSRRNPVEVDSGAYELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNEFED 5
W RR P+ DS A E+ K VQ+E DSSSQDWKAQL++PP DTRYKTEDVTATKGNEFED
Sbjct: 9 WLRRIPIATDSPANEVEKTVQSEVVDSSSQDWKAQLRVPPPDTRYKTEDVTATKGNEFED 68
Query: 4 Y 2
Y
Sbjct: 69 Y 69
>ref|XP_002271357.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Vitis vinifera]
Length = 480
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/61 (73%), Positives = 50/61 (81%)
Frame = -3
Query: 184 WSRRNPVEVDSGAYELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNEFED 5
W RR P+ DS A E+ K VQ+E DSSSQDWKAQL++PP DTRYKTEDVTATKGNEFED
Sbjct: 51 WLRRIPIATDSPANEVEKTVQSEVVDSSSQDWKAQLRVPPPDTRYKTEDVTATKGNEFED 110
Query: 4 Y 2
Y
Sbjct: 111 Y 111
>emb|CBI40324.3| unnamed protein product [Vitis vinifera]
Length = 472
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/61 (72%), Positives = 48/61 (78%)
Frame = -3
Query: 184 WSRRNPVEVDSGAYELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNEFED 5
W RRN DS E+ K VQ+E DSSSQDWKA+LKIPP DTRY+TEDVTATKGNEFED
Sbjct: 43 WLRRNQAGADSAVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEFED 102
Query: 4 Y 2
Y
Sbjct: 103 Y 103
>ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Vitis vinifera]
gi|147785187|emb|CAN75439.1| hypothetical protein
VITISV_000835 [Vitis vinifera]
Length = 491
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/61 (72%), Positives = 48/61 (78%)
Frame = -3
Query: 184 WSRRNPVEVDSGAYELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNEFED 5
W RRN DS E+ K VQ+E DSSSQDWKA+LKIPP DTRY+TEDVTATKGNEFED
Sbjct: 62 WLRRNQAGADSAVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEFED 121
Query: 4 Y 2
Y
Sbjct: 122 Y 122
>ref|XP_006341720.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like isoform X1
[Solanum tuberosum] gi|565349480|ref|XP_006341721.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like
isoform X2 [Solanum tuberosum]
Length = 488
Score = 92.4 bits (228), Expect = 6e-17
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = -3
Query: 184 WSRRNPVEVDSGAYELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNEFED 5
W RRN + DS E+ K VQ+E D SSQDWKA+LKIPP DTRY+TEDVTATKGNEFED
Sbjct: 59 WLRRNQLASDSTVDEVEKTVQSEAVDQSSQDWKARLKIPPADTRYRTEDVTATKGNEFED 118
Query: 4 Y 2
Y
Sbjct: 119 Y 119
>ref|XP_004248580.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Solanum
lycopersicum]
Length = 491
Score = 92.4 bits (228), Expect = 6e-17
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = -3
Query: 184 WSRRNPVEVDSGAYELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNEFED 5
W RRN + DS E+ K VQ+E D SSQDWKA+LKIPP DTRY+TEDVTATKGNEFED
Sbjct: 62 WLRRNQLASDSTVDEVEKTVQSEAVDQSSQDWKARLKIPPADTRYRTEDVTATKGNEFED 121
Query: 4 Y 2
Y
Sbjct: 122 Y 122
>gb|EAY94957.1| hypothetical protein OsI_16765 [Oryza sativa Indica Group]
Length = 484
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/78 (57%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = -3
Query: 232 RQPTPXXXXXXXXXXHWSRRNPVEVDS-GAYELAKPVQNETADSSSQDWKAQLKIPPRDT 56
RQP P W RRN + ++ GA E P + DSSSQDWKAQLK+PP+DT
Sbjct: 38 RQPQPQQTPHNSQHQQWLRRNQIAAEAAGASEQKAPPVADGIDSSSQDWKAQLKLPPQDT 97
Query: 55 RYKTEDVTATKGNEFEDY 2
RY+TEDVTATKGNEFEDY
Sbjct: 98 RYRTEDVTATKGNEFEDY 115
>ref|NP_001053408.1| Os04g0533000 [Oryza sativa Japonica Group]
gi|75327302|sp|Q7XMK8.1|RH6_ORYSJ RecName: Full=DEAD-box
ATP-dependent RNA helicase 6 gi|32489827|emb|CAE04571.1|
OSJNBb0039L24.10 [Oryza sativa Japonica Group]
gi|113564979|dbj|BAF15322.1| Os04g0533000 [Oryza sativa
Japonica Group] gi|125591093|gb|EAZ31443.1| hypothetical
protein OsJ_15580 [Oryza sativa Japonica Group]
gi|215701173|dbj|BAG92597.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 498
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/78 (57%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = -3
Query: 232 RQPTPXXXXXXXXXXHWSRRNPVEVDS-GAYELAKPVQNETADSSSQDWKAQLKIPPRDT 56
RQP P W RRN + ++ GA E P + DSSSQDWKAQLK+PP+DT
Sbjct: 52 RQPQPQQTPHNSQHQQWLRRNQIAAEAAGASEQKAPPVADGIDSSSQDWKAQLKLPPQDT 111
Query: 55 RYKTEDVTATKGNEFEDY 2
RY+TEDVTATKGNEFEDY
Sbjct: 112 RYRTEDVTATKGNEFEDY 129
>ref|XP_004133869.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Cucumis
sativus] gi|449480172|ref|XP_004155819.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 8-like [Cucumis
sativus]
Length = 492
Score = 89.7 bits (221), Expect = 4e-16
Identities = 44/64 (68%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Frame = -3
Query: 184 WSRRNPV---EVDSGAYELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNE 14
W +RN + DS E+ K VQ+E DSSSQDWKA+LKIPP DTRYKTEDVTATKGNE
Sbjct: 60 WLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTATKGNE 119
Query: 13 FEDY 2
FEDY
Sbjct: 120 FEDY 123
>ref|XP_002320116.2| hypothetical protein POPTR_0014s07690g [Populus trichocarpa]
gi|550323729|gb|EEE98431.2| hypothetical protein
POPTR_0014s07690g [Populus trichocarpa]
Length = 505
Score = 89.4 bits (220), Expect = 5e-16
Identities = 43/62 (69%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = -3
Query: 184 WSRRNPVEV-DSGAYELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNEFE 8
W RRN + DS E+ K VQ+E DSSSQDWKA+LKIPP DTRY+TEDVTATKGN+FE
Sbjct: 75 WLRRNQLAAADSSVDEVEKTVQSEAVDSSSQDWKAKLKIPPADTRYQTEDVTATKGNDFE 134
Query: 7 DY 2
DY
Sbjct: 135 DY 136
>ref|XP_002301349.1| DEAD/DEAH box helicase family protein [Populus trichocarpa]
gi|222843075|gb|EEE80622.1| DEAD/DEAH box helicase
family protein [Populus trichocarpa]
Length = 499
Score = 89.4 bits (220), Expect = 5e-16
Identities = 43/62 (69%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = -3
Query: 184 WSRRNPVEV-DSGAYELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNEFE 8
W RRN + DS E+ K VQ+E DSSSQDWKA+LKIPP DTRY+TEDVTATKGN+FE
Sbjct: 69 WLRRNQLTAADSSIDEVEKTVQSEAVDSSSQDWKAKLKIPPADTRYRTEDVTATKGNDFE 128
Query: 7 DY 2
DY
Sbjct: 129 DY 130
>ref|XP_006848084.1| hypothetical protein AMTR_s00029p00205680 [Amborella trichopoda]
gi|548851389|gb|ERN09665.1| hypothetical protein
AMTR_s00029p00205680 [Amborella trichopoda]
Length = 468
Score = 88.6 bits (218), Expect = 8e-16
Identities = 46/64 (71%), Positives = 48/64 (75%), Gaps = 3/64 (4%)
Frame = -3
Query: 184 WSRRN---PVEVDSGAYELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNE 14
W RRN P+E D E K VQ+E D SSQDWKAQLKIPP DTRYKTEDVTATKGNE
Sbjct: 37 WMRRNESSPIE-DGNQNEEEKRVQSEVVDPSSQDWKAQLKIPPVDTRYKTEDVTATKGNE 95
Query: 13 FEDY 2
FEDY
Sbjct: 96 FEDY 99
>ref|XP_003528863.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Glycine max]
Length = 500
Score = 88.6 bits (218), Expect = 8e-16
Identities = 44/61 (72%), Positives = 48/61 (78%)
Frame = -3
Query: 184 WSRRNPVEVDSGAYELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNEFED 5
W RR+ VD E+ K VQ+E DSSSQDWKA+LKIPP DTRYKTEDVTATKGNEFED
Sbjct: 75 WLRRDANAVD----EVEKTVQSEAVDSSSQDWKARLKIPPADTRYKTEDVTATKGNEFED 130
Query: 4 Y 2
Y
Sbjct: 131 Y 131
>ref|XP_003528862.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like isoform X1
[Glycine max]
Length = 503
Score = 88.6 bits (218), Expect = 8e-16
Identities = 44/61 (72%), Positives = 48/61 (78%)
Frame = -3
Query: 184 WSRRNPVEVDSGAYELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNEFED 5
W RR+ VD E+ K VQ+E DSSSQDWKA+LKIPP DTRYKTEDVTATKGNEFED
Sbjct: 78 WLRRDANAVD----EVEKTVQSEAVDSSSQDWKARLKIPPADTRYKTEDVTATKGNEFED 133
Query: 4 Y 2
Y
Sbjct: 134 Y 134
>ref|XP_002511831.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223549011|gb|EEF50500.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 507
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/62 (69%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = -3
Query: 184 WSRRNPVE-VDSGAYELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNEFE 8
W RR+ + DS E+ K VQ+E DS+SQDWKA+LKIPP DTRYKTEDVTATKGNEFE
Sbjct: 77 WLRRSQLPPADSSVDEVEKTVQSEAVDSTSQDWKARLKIPPPDTRYKTEDVTATKGNEFE 136
Query: 7 DY 2
DY
Sbjct: 137 DY 138
>gb|EOX96017.1| DEAD-box ATP-dependent RNA helicase 8 isoform 3, partial [Theobroma
cacao]
Length = 363
Score = 87.4 bits (215), Expect = 2e-15
Identities = 46/64 (71%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Frame = -3
Query: 184 WSRRN--PVEVDSGAY-ELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNE 14
W RRN P DS E+ K VQ+E DSSSQDWKA+LKIPP DTRYKTEDVTATKGNE
Sbjct: 10 WLRRNLLPGGNDSSVVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTATKGNE 69
Query: 13 FEDY 2
FEDY
Sbjct: 70 FEDY 73
>gb|EOX96016.1| RNAhelicase-like 8 isoform 2, partial [Theobroma cacao]
Length = 356
Score = 87.4 bits (215), Expect = 2e-15
Identities = 46/64 (71%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Frame = -3
Query: 184 WSRRN--PVEVDSGAY-ELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNE 14
W RRN P DS E+ K VQ+E DSSSQDWKA+LKIPP DTRYKTEDVTATKGNE
Sbjct: 22 WLRRNLLPGGNDSSVVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTATKGNE 81
Query: 13 FEDY 2
FEDY
Sbjct: 82 FEDY 85
>gb|EOX96015.1| RNAhelicase-like 8 isoform 1 [Theobroma cacao]
Length = 501
Score = 87.4 bits (215), Expect = 2e-15
Identities = 46/64 (71%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Frame = -3
Query: 184 WSRRN--PVEVDSGAY-ELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNE 14
W RRN P DS E+ K VQ+E DSSSQDWKA+LKIPP DTRYKTEDVTATKGNE
Sbjct: 69 WLRRNLLPGGNDSSVVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTATKGNE 128
Query: 13 FEDY 2
FEDY
Sbjct: 129 FEDY 132
>ref|XP_006576347.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like isoform X2
[Glycine max]
Length = 502
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = -3
Query: 184 WSRRNPVEVDSGAYELAKPVQNETADSSSQDWKAQLKIPPRDTRYKTEDVTATKGNEFED 5
W RR+ VD E+ K VQ+E DSSSQDWKA+LKIPP DTRY+TEDVTATKGNEFED
Sbjct: 77 WLRRDANAVD----EVEKTVQSEPMDSSSQDWKARLKIPPADTRYRTEDVTATKGNEFED 132
Query: 4 Y 2
Y
Sbjct: 133 Y 133
>ref|XP_006652567.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
6-like [Oryza brachyantha]
Length = 507
Score = 85.5 bits (210), Expect = 7e-15
Identities = 43/76 (56%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = -3
Query: 226 PTPXXXXXXXXXXHWSRRNPVEVDS-GAYELAKPVQNETADSSSQDWKAQLKIPPRDTRY 50
P P W RRN + ++ GA E P + DSSSQDWKAQLK+PP+DTRY
Sbjct: 63 PQPQQTQNTSQHQQWLRRNQITNEAAGASEQKAPPVPDGIDSSSQDWKAQLKLPPQDTRY 122
Query: 49 KTEDVTATKGNEFEDY 2
+TEDVTATKGNEFEDY
Sbjct: 123 RTEDVTATKGNEFEDY 138