BLASTX nr result
ID: Zingiber23_contig00014322
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00014322
(1166 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002462761.1| hypothetical protein SORBIDRAFT_02g031520 [S... 336 9e-90
ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group] g... 334 5e-89
dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare] 332 1e-88
gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indi... 332 1e-88
ref|NP_001159276.1| hypothetical protein [Zea mays] gi|223943161... 332 2e-88
ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containi... 330 9e-88
ref|XP_006660919.1| PREDICTED: pentatricopeptide repeat-containi... 325 2e-86
gb|EMT01017.1| hypothetical protein F775_09122 [Aegilops tauschii] 315 2e-83
ref|XP_006416414.1| hypothetical protein EUTSA_v10007329mg [Eutr... 308 4e-81
ref|XP_002890377.1| pentatricopeptide repeat-containing protein ... 307 6e-81
ref|NP_564110.1| pentatricopeptide repeat-containing protein [Ar... 305 2e-80
ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ... 305 3e-80
ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Caps... 304 4e-80
ref|XP_002523825.1| pentatricopeptide repeat-containing protein,... 304 4e-80
ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containi... 303 7e-80
emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera] 303 9e-80
ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Popu... 301 3e-79
gb|EOY15135.1| Pentatricopeptide repeat (PPR) superfamily protei... 300 1e-78
ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containi... 300 1e-78
ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containi... 298 2e-78
>ref|XP_002462761.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
gi|241926138|gb|EER99282.1| hypothetical protein
SORBIDRAFT_02g031520 [Sorghum bicolor]
Length = 535
Score = 336 bits (862), Expect = 9e-90
Identities = 182/359 (50%), Positives = 228/359 (63%), Gaps = 1/359 (0%)
Frame = -3
Query: 1074 CSFTPSVAVDNATTTLPSVATPISAVKSQLLENLYTLIRDHRRANXXXXXXXXXXXXXXX 895
C +PS + T P P++ ++LL+ L+ + DHRRAN
Sbjct: 24 CEGSPSPSPPTDTDPSPP---PLTRDDTKLLDALHAALLDHRRANPTAELPVSPPFDPLP 80
Query: 894 XXXXXXXXXXXXXXXXXLAAHLINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXX 715
L HL+ R L G P + AFF
Sbjct: 81 SLSSTISDLLPSPPPPHLPLHLLRRLLALRRGVPLPEAAAFFR----HIAASLPADSLPD 136
Query: 714 PFVAMINFCGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRM 535
+ +MI+ KHHHF +A HLLD+MR +PI+++ LIRRYVRA++P +A + RM
Sbjct: 137 LYASMIDLLAKHHHFSLARHLLDEMRERAVPISSRLIFALIRRYVRAEMPSEAADLFRRM 196
Query: 534 PDYGC-EPDATTFSSLLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKL 358
+YG P+ T +SLLA LSKKR A++AQ+LFD+ + F PDVV+Y+++VHAWCRAG+L
Sbjct: 197 EEYGSGAPEPATLASLLAALSKKRLASEAQALFDSCRTVFTPDVVLYTAVVHAWCRAGQL 256
Query: 357 DEAERVFAEMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSL 178
DEAERVFAEM SGI PNVYTYTAVIDAM RA Q+PRA ELLCQMID+GCPPNTATFN++
Sbjct: 257 DEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAI 316
Query: 177 MRAHVKARRPEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQMTA 1
MRAHVKA R EQVLQV NQM QL CEPD+ITYN LIE+HC KGQ NLDAALK+L++M A
Sbjct: 317 MRAHVKAGRSEQVLQVHNQMHQLRCEPDIITYNFLIETHCGKGQGNLDAALKVLDKMIA 375
Score = 95.5 bits (236), Expect = 4e-17
Identities = 64/234 (27%), Positives = 115/234 (49%), Gaps = 4/234 (1%)
Frame = -3
Query: 711 FVAMINFCGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMP 532
+ A+++ + D A + +M+ GI T++ +I RA A E L +M
Sbjct: 243 YTAVVHAWCRAGQLDEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMI 302
Query: 531 DYGCEPDATTFSSLLAVLSKKRQAAKAQSLFDA-HKHRFPPDVVIYSSLVHAWCRAGK-- 361
D GC P+ TF++++ K ++ + + + H+ R PD++ Y+ L+ C G+
Sbjct: 303 DSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMHQLRCEPDIITYNFLIETHCGKGQGN 362
Query: 360 LDEAERVFAEMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNS 181
LD A +V +M P+ +T+ + + + A++L +M + C PN T+N
Sbjct: 363 LDAALKVLDKMIAKKCVPDCHTFNPMFRLLVVLGNIGAAHKLYEKMRELQCKPNVVTYNC 422
Query: 180 LMRAHVKARRPEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQ-KNLDAALK 22
L++ K + + VL++K M G EP++ TY LIE+ C +G K A LK
Sbjct: 423 LLKLFNKEKSMDMVLRMKKNMDVEGIEPNMHTYAALIEAFCGRGNWKRAHATLK 476
>ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1
-like protein [Oryza sativa Japonica Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa
Japonica Group] gi|125606498|gb|EAZ45534.1| hypothetical
protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 543
Score = 334 bits (856), Expect = 5e-89
Identities = 173/344 (50%), Positives = 227/344 (65%), Gaps = 2/344 (0%)
Frame = -3
Query: 1026 PSVATPISAVKSQLLENLYTLIRDHRRANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 847
P++A ++ +++LL+ L+ + DHRRA+
Sbjct: 45 PALAPSLTTAETKLLDALHAALVDHRRAHPAAPVPATAPSEPPLPELSSALSGLLASPPS 104
Query: 846 XLAA-HLINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXXPFVAMINFCGKHHHF 670
L+ R L G P + +AFF+ + AMI+ KHHHF
Sbjct: 105 PQLPLGLLRRLLALRRGVPLPEAVAFFH----HVLPSLPPDSLPALYAAMIDLLAKHHHF 160
Query: 669 DIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGC-EPDATTFSS 493
+A HLLD+MR +PI+ Q LIRRYVRA++P +A++ RM +YG PD T +S
Sbjct: 161 PLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLAS 220
Query: 492 LLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGI 313
LL LSKKR A++AQ++FD++K F PDVV+Y++LVHAWCR+G+L+EAERVFAEM +G+
Sbjct: 221 LLGALSKKRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCRSGRLNEAERVFAEMQQAGV 280
Query: 312 SPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQ 133
+PNVYTYTAVIDAM RA Q+PRA ELLCQMID+GCPPNTATFN++MRAHVKA R EQVLQ
Sbjct: 281 TPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQ 340
Query: 132 VKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQMTA 1
V NQM+QLGCEPD+ITYN L+E+HC KGQ NLDAA+K+L +M A
Sbjct: 341 VHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIA 384
Score = 93.2 bits (230), Expect = 2e-16
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 6/205 (2%)
Frame = -3
Query: 645 KMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLAVLSKKR 466
+M+ G+ T++ +I RA A E L +M D GC P+ TF++++ K
Sbjct: 274 EMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVK-- 331
Query: 465 QAAKAQSLFDAHKHR----FPPDVVIYSSLVHAWCRAGK--LDEAERVFAEMATSGISPN 304
A +++ + H PD++ Y+ L+ C G+ LD A ++ M G P+
Sbjct: 332 -AGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPD 390
Query: 303 VYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQVKN 124
+T+ ++ + + A +L +M + C PN T+N LMR + + VL++K
Sbjct: 391 CHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKK 450
Query: 123 QMKQLGCEPDVITYNLLIESHCTKG 49
M G EP+V TY LIE+ C +G
Sbjct: 451 DMDAQGVEPNVNTYAALIEAFCGRG 475
Score = 63.5 bits (153), Expect = 2e-07
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Frame = -3
Query: 648 DKMRALGIPIANQTFSILIRRYV---RADLPDDATEALLRMPDYGCEPDATTFSSLLAVL 478
++MR LG T++ L+ + +++L D A + L RM GC PD TF+ +L ++
Sbjct: 343 NQMRQLGCEPDIITYNFLMETHCGKGQSNL-DAAMKMLTRMIAKGCIPDCHTFNPMLKLV 401
Query: 477 SKKRQAAKAQSLFDAHKH-RFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISPNV 301
A+ L++ + + P+VV Y+ L+ + +D R+ +M G+ PNV
Sbjct: 402 LVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKKDMDAQGVEPNV 461
Query: 300 YTYTAVIDAMCRAEQMPRANELLCQMI-DAGCPPNTATFN---SLMRAHVKARRPEQVLQ 133
TY A+I+A C RA+ L +M+ + P ++ +L+R + RR E++++
Sbjct: 462 NTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRKAGQLRRHEELVE 521
Query: 132 V 130
+
Sbjct: 522 M 522
>dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 332 bits (852), Expect = 1e-88
Identities = 173/343 (50%), Positives = 223/343 (65%), Gaps = 1/343 (0%)
Frame = -3
Query: 1026 PSVATPISAVKSQLLENLYTLIRDHRRANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 847
P+ P++ +++LL++L+ I DH RA+
Sbjct: 41 PNSPPPLTPAEAKLLDSLHAAILDHSRAHPSTALPSSPPFEPLPAFSSTLAGLLPSPPAP 100
Query: 846 XLAAHLINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXXPFVAMINFCGKHHHFD 667
LA L+ R L G PF + L FF+ + AMI+ KHHHF
Sbjct: 101 HLALQLLGRLLALRRGVPFPEALTFFH----HVVPSLPADSLPALYAAMIDLLAKHHHFP 156
Query: 666 IAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCE-PDATTFSSL 490
+A HLLD+MR IP+++Q +IRRYVRA + +A+E RM +YG PD +SL
Sbjct: 157 LARHLLDEMRERSIPVSSQVILAIIRRYVRAGMSPEASELFRRMEEYGAGVPDPAVLASL 216
Query: 489 LAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGIS 310
L LSKKR A +AQ+LFD++K FPPDVV+Y++LVHAWCRAG LD+AE+VFAEM +GI
Sbjct: 217 LGALSKKRLAGEAQALFDSYKSVFPPDVVLYTTLVHAWCRAGCLDKAEQVFAEMQQAGIM 276
Query: 309 PNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQV 130
PNVYTYT+VIDAM RA Q+PRA ELLCQM++ GCPPNTATFN++MRAHVKA R EQVLQV
Sbjct: 277 PNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPPNTATFNAIMRAHVKAGRSEQVLQV 336
Query: 129 KNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQMTA 1
NQM+QLGC+PD+ITYN L+E+HC KGQ NLDAA+K+L +M A
Sbjct: 337 HNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKMIA 379
Score = 100 bits (248), Expect = 1e-18
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 6/213 (2%)
Frame = -3
Query: 669 DIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSL 490
D A + +M+ GI T++ +I RA A E L +M + GC P+ TF+++
Sbjct: 261 DKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPPNTATFNAI 320
Query: 489 LAVLSKKRQAAKAQSLFDAHKHR----FPPDVVIYSSLVHAWCRAGK--LDEAERVFAEM 328
+ K A +++ + H PD++ Y+ L+ C G+ LD A +V A+M
Sbjct: 321 MRAHVK---AGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKM 377
Query: 327 ATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRP 148
G P+ +T+ ++ + + A L +M + C PN T+N LM+ K +
Sbjct: 378 IAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYNLLMKLFNKEKSM 437
Query: 147 EQVLQVKNQMKQLGCEPDVITYNLLIESHCTKG 49
+ VL++K M G EP+V TY LIES C +G
Sbjct: 438 DMVLRIKKDMDAQGVEPNVNTYGALIESFCGRG 470
Score = 60.5 bits (145), Expect = 1e-06
Identities = 46/181 (25%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Frame = -3
Query: 648 DKMRALGIPIANQTFSILIRRYV---RADLPDDATEALLRMPDYGCEPDATTFSSLLAVL 478
++MR LG T++ L+ + +++L D A + L +M GC PD TF+ +L ++
Sbjct: 338 NQMRQLGCDPDIITYNFLMETHCGKGQSNL-DAAMKVLAKMIAKGCIPDCHTFNPMLKLV 396
Query: 477 SKKRQAAKAQSLFDAHKH-RFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISPNV 301
A+ L++ + + P+VV Y+ L+ + + +D R+ +M G+ PNV
Sbjct: 397 LGTGNVEAARRLYERMQELQCKPNVVTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNV 456
Query: 300 YTYTAVIDAMCRAEQMPRANELLCQMI-DAGCPPNTATFN---SLMRAHVKARRPEQVLQ 133
TY A+I++ C RA+ L +M+ + P ++ L+R + R+ E++++
Sbjct: 457 NTYGALIESFCGRGNWRRAHATLREMVEEKSLKPTKPVYDMVLMLLRKAGQLRKHEELVE 516
Query: 132 V 130
+
Sbjct: 517 L 517
>gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 332 bits (852), Expect = 1e-88
Identities = 164/278 (58%), Positives = 206/278 (74%), Gaps = 1/278 (0%)
Frame = -3
Query: 831 LINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXXPFVAMINFCGKHHHFDIAWHL 652
L+ R L G P + +AFF+ + AMI+ KHHHF +A HL
Sbjct: 112 LLRRLLALRRGVPLPEAVAFFH----HVLPSLPPDSLPALYAAMIDLLAKHHHFPLARHL 167
Query: 651 LDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGC-EPDATTFSSLLAVLS 475
LD+MR +PI+ Q LIRRYVRA++P +A++ RM +YG PD T +SLL LS
Sbjct: 168 LDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLASLLGALS 227
Query: 474 KKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISPNVYT 295
KKR A++AQ++FD++K F PDVV+Y++LVHAWCR+G+LDEAERVFAEM +G++PNVYT
Sbjct: 228 KKRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCRSGRLDEAERVFAEMQQAGVTPNVYT 287
Query: 294 YTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQVKNQMK 115
YTAVIDAM RA Q+PRA ELLCQMID+GCPPNTATFN++MRAHVKA R EQVLQV NQM+
Sbjct: 288 YTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMR 347
Query: 114 QLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQMTA 1
QLGCEPD+ITYN L+E+HC KGQ NLDAA+K+L +M A
Sbjct: 348 QLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIA 385
Score = 94.7 bits (234), Expect = 6e-17
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 6/227 (2%)
Frame = -3
Query: 711 FVAMINFCGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMP 532
+ +++ + D A + +M+ G+ T++ +I RA A E L +M
Sbjct: 253 YTTLVHAWCRSGRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMI 312
Query: 531 DYGCEPDATTFSSLLAVLSKKRQAAKAQSLFDAHKHR----FPPDVVIYSSLVHAWCRAG 364
D GC P+ TF++++ K A +++ + H PD++ Y+ L+ C G
Sbjct: 313 DSGCPPNTATFNAIMRAHVK---AGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKG 369
Query: 363 K--LDEAERVFAEMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTAT 190
+ LD A ++ M G P+ +T+ ++ + + A +L +M + C PN T
Sbjct: 370 QSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVT 429
Query: 189 FNSLMRAHVKARRPEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKG 49
+N LMR + + VL++K M G EP+V TY LIE+ C +G
Sbjct: 430 YNLLMRLFNLEKSMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRG 476
Score = 63.5 bits (153), Expect = 2e-07
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Frame = -3
Query: 648 DKMRALGIPIANQTFSILIRRYV---RADLPDDATEALLRMPDYGCEPDATTFSSLLAVL 478
++MR LG T++ L+ + +++L D A + L RM GC PD TF+ +L ++
Sbjct: 344 NQMRQLGCEPDIITYNFLMETHCGKGQSNL-DAAMKMLTRMIAKGCIPDCHTFNPMLKLV 402
Query: 477 SKKRQAAKAQSLFDAHKH-RFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISPNV 301
A+ L++ + + P+VV Y+ L+ + +D R+ +M G+ PNV
Sbjct: 403 LVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKRDMDAQGVEPNV 462
Query: 300 YTYTAVIDAMCRAEQMPRANELLCQMI-DAGCPPNTATFN---SLMRAHVKARRPEQVLQ 133
TY A+I+A C RA+ L +M+ + P ++ +L+R + RR E++++
Sbjct: 463 NTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRKAGQLRRHEELVE 522
Query: 132 V 130
+
Sbjct: 523 M 523
>ref|NP_001159276.1| hypothetical protein [Zea mays] gi|223943161|gb|ACN25664.1| unknown
[Zea mays] gi|414590092|tpg|DAA40663.1| TPA: hypothetical
protein ZEAMMB73_658820 [Zea mays]
gi|414590093|tpg|DAA40664.1| TPA: hypothetical protein
ZEAMMB73_658820 [Zea mays]
Length = 535
Score = 332 bits (851), Expect = 2e-88
Identities = 181/359 (50%), Positives = 225/359 (62%), Gaps = 1/359 (0%)
Frame = -3
Query: 1074 CSFTPSVAVDNATTTLPSVATPISAVKSQLLENLYTLIRDHRRANXXXXXXXXXXXXXXX 895
C +PS T T P P++ ++L++ L + DHRRAN
Sbjct: 24 CEGSPSQPGQTGTDTSPP---PLTRDDTKLVDALLAALLDHRRANPAAELPVPSLSNTLP 80
Query: 894 XXXXXXXXXXXXXXXXXLAAHLINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXX 715
L HL+ R L G P + +AFF+
Sbjct: 81 SLSSAISDLLPSPPPPHLPLHLLLRLLALRRGVPLPEAVAFFH----HVSPSLPADSLPD 136
Query: 714 PFVAMINFCGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRM 535
+ +MI KH HF +A HLLD+MR +PI+ Q L RRYVRA++P +A + RM
Sbjct: 137 LYASMIVLLAKHRHFGLARHLLDEMRERAVPISRQLILALTRRYVRAEMPSEAADLFRRM 196
Query: 534 PDYGC-EPDATTFSSLLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKL 358
+YG PD T +SLLA LSKKR A++AQ+LFD+ + F PDVV+Y+++VHAWCRAG+L
Sbjct: 197 EEYGAGAPDPATLASLLAALSKKRLASEAQALFDSCRTVFTPDVVLYTAVVHAWCRAGRL 256
Query: 357 DEAERVFAEMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSL 178
DEAERVF EM SGI PNVYTYTAVIDAM RA Q+PRA ELLCQMID+GCPPNT TFN++
Sbjct: 257 DEAERVFTEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTTTFNAI 316
Query: 177 MRAHVKARRPEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQMTA 1
MR+HVKA R EQVLQV NQM+QL CEPDVITYN LIE+HC KGQ NLDAALK+L++MTA
Sbjct: 317 MRSHVKAGRSEQVLQVHNQMQQLRCEPDVITYNFLIETHCGKGQGNLDAALKVLDKMTA 375
Score = 98.2 bits (243), Expect = 6e-18
Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 6/227 (2%)
Frame = -3
Query: 711 FVAMINFCGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMP 532
+ A+++ + D A + +M+ GI T++ +I RA A E L +M
Sbjct: 243 YTAVVHAWCRAGRLDEAERVFTEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMI 302
Query: 531 DYGCEPDATTFSSLLAVLSKKRQAAKAQSLFDAHKH----RFPPDVVIYSSLVHAWCRAG 364
D GC P+ TTF+ A++ +A +++ + H R PDV+ Y+ L+ C G
Sbjct: 303 DSGCPPNTTTFN---AIMRSHVKAGRSEQVLQVHNQMQQLRCEPDVITYNFLIETHCGKG 359
Query: 363 K--LDEAERVFAEMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTAT 190
+ LD A +V +M P+ +T+ + + + A++L +M + C PN T
Sbjct: 360 QGNLDAALKVLDKMTAKKCVPDCHTFNPMFRLLLVLGNIGAAHKLYEKMRELQCKPNVVT 419
Query: 189 FNSLMRAHVKARRPEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKG 49
+N L+R K + + VL++K M G EP++ TY LIE+ C +G
Sbjct: 420 YNCLLRLFNKEKSMDMVLRMKKDMDAEGIEPNMHTYAALIEAFCGRG 466
Score = 58.9 bits (141), Expect = 4e-06
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = -3
Query: 564 DDATEALLRMPDYGCEPDATTFSSLLAVLSKKRQAAKAQSLFDAHKH-RFPPDVVIYSSL 388
D A + L +M C PD TF+ + +L A L++ + + P+VV Y+ L
Sbjct: 364 DAALKVLDKMTAKKCVPDCHTFNPMFRLLLVLGNIGAAHKLYEKMRELQCKPNVVTYNCL 423
Query: 387 VHAWCRAGKLDEAERVFAEMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMID 217
+ + + +D R+ +M GI PN++TY A+I+A C RA+ L +MI+
Sbjct: 424 LRLFNKEKSMDMVLRMKKDMDAEGIEPNMHTYAALIEAFCGRGNWKRAHTTLKEMIE 480
>ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 330 bits (845), Expect = 9e-88
Identities = 177/361 (49%), Positives = 229/361 (63%), Gaps = 1/361 (0%)
Frame = -3
Query: 1080 RRCSFTPSVAVDNATTTLPSVATPISAVKSQLLENLYTLIRDHRRANXXXXXXXXXXXXX 901
R C+ P + T P+ P++ +++L+++L + DHRRA+
Sbjct: 20 RLCTTEPFT--EPITEPAPASPPPLTHEETKLVDSLQAALLDHRRAHPATPLPASPPFDP 77
Query: 900 XXXXXXXXXXXXXXXXXXXLAAHLINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXX 721
L H+ R L G PF + LAFFN
Sbjct: 78 LPSLSTTLTGLLPSTPSPHLTFHVFGRLLALRRGIPFPEALAFFN----HVLPSLPTDSL 133
Query: 720 XXPFVAMINFCGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALL 541
+ +M++ KHHHF +A HLLD+MR IPI++Q LIRRYVRA + +A++
Sbjct: 134 PELYASMMDLLAKHHHFPLARHLLDEMRKRSIPISSQVILALIRRYVRAGMSSEASDLFR 193
Query: 540 RMPDYGCE-PDATTFSSLLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAG 364
M +YG PD +SLL LSKKR A++AQ+LFD++K F PDVV+Y++LVHAWCR+G
Sbjct: 194 SMEEYGGGVPDPAVLASLLGALSKKRLASEAQALFDSYKSVFTPDVVLYTTLVHAWCRSG 253
Query: 363 KLDEAERVFAEMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFN 184
LD+AE+VFAEM +GI PNVYTYTAVIDAM RA Q+PRA ELLCQMID+GCPPNTATFN
Sbjct: 254 CLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFN 313
Query: 183 SLMRAHVKARRPEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQMT 4
++MRAHVKA R EQVLQV NQM+QLGC+PD+ITYN L+E+HC KGQ NLDAA+KLL +M
Sbjct: 314 AIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKMI 373
Query: 3 A 1
A
Sbjct: 374 A 374
Score = 98.2 bits (243), Expect = 6e-18
Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 6/227 (2%)
Frame = -3
Query: 669 DIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSL 490
D A + +M+ GI T++ +I RA A E L +M D GC P+ TF+++
Sbjct: 256 DKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAI 315
Query: 489 LAVLSKKRQAAKAQSLFDAHKHR----FPPDVVIYSSLVHAWCRAGK--LDEAERVFAEM 328
+ K A +++ + H PD++ Y+ L+ C G+ LD A ++ +M
Sbjct: 316 MRAHVK---AGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKM 372
Query: 327 ATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRP 148
G +P+ +T+ ++ + + A++L +M + C PN T+N LM+ K +
Sbjct: 373 IAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKDKSM 432
Query: 147 EQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
+ VL++K M G EP+V TY LIE+ C +G N A L +M
Sbjct: 433 DMVLRIKKDMDAQGVEPNVNTYGALIETFCGRG--NWKRAYATLREM 477
Score = 60.1 bits (144), Expect = 2e-06
Identities = 46/181 (25%), Positives = 90/181 (49%), Gaps = 8/181 (4%)
Frame = -3
Query: 648 DKMRALGIPIANQTFSILIRRYV---RADLPDDATEALLRMPDYGCEPDATTFSSLLAVL 478
++MR LG T++ L+ + +++L D A + LL+M GC PD TF+ +L ++
Sbjct: 333 NQMRQLGCDPDIITYNFLMETHCGKGQSNL-DAAMKLLLKMIAKGCTPDCHTFNPMLKLV 391
Query: 477 SKKRQAAKAQSLFDAHKH-RFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISPNV 301
A L++ + + P+V+ Y+ L+ + + +D R+ +M G+ PNV
Sbjct: 392 VVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKDKSMDMVLRIKKDMDAQGVEPNV 451
Query: 300 YTYTAVIDAMCRAEQMPRANELLCQMIDA-GCPPNTATFNS---LMRAHVKARRPEQVLQ 133
TY A+I+ C RA L +M++ P ++ L+R + R+ E++++
Sbjct: 452 NTYGALIETFCGRGNWKRAYATLREMLEVKSLKPKKPVYDMVLVLLRKAGQLRKHEELVE 511
Query: 132 V 130
+
Sbjct: 512 L 512
>ref|XP_006660919.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Oryza brachyantha]
Length = 394
Score = 325 bits (833), Expect = 2e-86
Identities = 159/235 (67%), Positives = 190/235 (80%), Gaps = 1/235 (0%)
Frame = -3
Query: 702 MINFCGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYG 523
MI+ KHHHF +A HLLD+MR +PI+ Q LIRRYVRA++P +A++ RM YG
Sbjct: 1 MIDLLAKHHHFPLARHLLDEMRERSVPISPQLILTLIRRYVRAEMPSEASDLFRRMEGYG 60
Query: 522 C-EPDATTFSSLLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAE 346
PD T +SLL LSKKR A++AQ+LFD++K F PDVV+Y++LVHAWCR G+LDEAE
Sbjct: 61 AGAPDPATLASLLGALSKKRLASEAQALFDSYKSVFTPDVVLYTTLVHAWCRGGRLDEAE 120
Query: 345 RVFAEMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAH 166
RVFAEM SGI+PNVYTYTAVIDAM RA Q+PRA ELLCQMID+GCPPNTATFN++MRAH
Sbjct: 121 RVFAEMQQSGITPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAH 180
Query: 165 VKARRPEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQMTA 1
VKA R EQVLQV NQM+QLGCEPD+ITYN L+E+HC KGQ NLDAA+KLL +M A
Sbjct: 181 VKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQCNLDAAMKLLTRMIA 235
Score = 94.7 bits (234), Expect = 6e-17
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 6/227 (2%)
Frame = -3
Query: 669 DIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSL 490
D A + +M+ GI T++ +I RA A E L +M D GC P+ TF+++
Sbjct: 117 DEAERVFAEMQQSGITPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAI 176
Query: 489 LAVLSKKRQAAKAQSLFDAHKHR----FPPDVVIYSSLVHAWCRAGK--LDEAERVFAEM 328
+ K A +++ + H PD++ Y+ L+ C G+ LD A ++ M
Sbjct: 177 MRAHVK---AGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQCNLDAAMKLLTRM 233
Query: 327 ATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRP 148
G P+ +T+ ++ + + A +L +M D C PN T+N LMR + +
Sbjct: 234 IAKGCIPDCHTFNPMLKLVFVLGNVDTARKLYERMQDLQCKPNVITYNLLMRLFNREKSM 293
Query: 147 EQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
+ VL++K M G EP+ TY LIE+ C +G N A L +M
Sbjct: 294 DMVLRIKKDMDAQGVEPNGNTYAALIEAFCGRG--NWKRAYTTLREM 338
Score = 60.5 bits (145), Expect = 1e-06
Identities = 47/181 (25%), Positives = 90/181 (49%), Gaps = 8/181 (4%)
Frame = -3
Query: 648 DKMRALGIPIANQTFSILIRRYV---RADLPDDATEALLRMPDYGCEPDATTFSSLLAVL 478
++MR LG T++ L+ + + +L D A + L RM GC PD TF+ +L ++
Sbjct: 194 NQMRQLGCEPDIITYNFLMETHCGKGQCNL-DAAMKLLTRMIAKGCIPDCHTFNPMLKLV 252
Query: 477 SKKRQAAKAQSLFDAHKH-RFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISPNV 301
A+ L++ + + P+V+ Y+ L+ + R +D R+ +M G+ PN
Sbjct: 253 FVLGNVDTARKLYERMQDLQCKPNVITYNLLMRLFNREKSMDMVLRIKKDMDAQGVEPNG 312
Query: 300 YTYTAVIDAMCRAEQMPRANELLCQMID-AGCPPNTATFN---SLMRAHVKARRPEQVLQ 133
TY A+I+A C RA L +M++ P ++ +L+R + R+ E++++
Sbjct: 313 NTYAALIEAFCGRGNWKRAYTTLREMVELKSLKPTKPVYDMVLALLRKAGQLRKHEELVE 372
Query: 132 V 130
+
Sbjct: 373 M 373
>gb|EMT01017.1| hypothetical protein F775_09122 [Aegilops tauschii]
Length = 395
Score = 315 bits (807), Expect = 2e-83
Identities = 153/235 (65%), Positives = 188/235 (80%), Gaps = 1/235 (0%)
Frame = -3
Query: 702 MINFCGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYG 523
MI+ KHHHF +A HLLD+MR IP+++Q +IRRYVRA + +A+E RM +YG
Sbjct: 1 MIDLLAKHHHFPLARHLLDEMRERSIPVSSQVILAIIRRYVRAGMSAEASELFRRMEEYG 60
Query: 522 CE-PDATTFSSLLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAE 346
PD +SLL LSKKR A++AQ+LFD++K FPPDVV+Y++LVHAWCRAG LD+AE
Sbjct: 61 AGVPDPAVLASLLGALSKKRLASEAQALFDSYKSVFPPDVVLYTTLVHAWCRAGCLDKAE 120
Query: 345 RVFAEMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAH 166
+VFAEM +GI PNVYTYT+VIDAM RA Q+PRA ELLCQMID GCPPNTATFN++MRAH
Sbjct: 121 QVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMIDTGCPPNTATFNAIMRAH 180
Query: 165 VKARRPEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQMTA 1
VKA R EQVLQV NQM+QLGC+PD+ITYN L+E+HC KGQ NLDAA+K+L +M A
Sbjct: 181 VKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKMIA 235
Score = 101 bits (252), Expect = 5e-19
Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 6/213 (2%)
Frame = -3
Query: 669 DIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSL 490
D A + +M+ GI T++ +I RA A E L +M D GC P+ TF+++
Sbjct: 117 DKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMIDTGCPPNTATFNAI 176
Query: 489 LAVLSKKRQAAKAQSLFDAHKHR----FPPDVVIYSSLVHAWCRAGK--LDEAERVFAEM 328
+ K A +++ + H PD++ Y+ L+ C G+ LD A +V A+M
Sbjct: 177 MRAHVK---AGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKM 233
Query: 327 ATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRP 148
G P+ +T+ ++ + + A +L +M + C PN T+N LM+ K +
Sbjct: 234 IAKGCIPDCHTFNPMLKLVLGTGNVEAARKLYERMQELQCKPNVVTYNLLMKLFNKEKSM 293
Query: 147 EQVLQVKNQMKQLGCEPDVITYNLLIESHCTKG 49
+ VL++K M G EP+V TY LIES C +G
Sbjct: 294 DMVLRIKKDMDAQGVEPNVNTYGALIESFCGRG 326
Score = 60.5 bits (145), Expect = 1e-06
Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 4/148 (2%)
Frame = -3
Query: 648 DKMRALGIPIANQTFSILIRRYV---RADLPDDATEALLRMPDYGCEPDATTFSSLLAVL 478
++MR LG T++ L+ + +++L D A + L +M GC PD TF+ +L ++
Sbjct: 194 NQMRQLGCDPDIITYNFLMETHCGKGQSNL-DAAMKVLAKMIAKGCIPDCHTFNPMLKLV 252
Query: 477 SKKRQAAKAQSLFDAHKH-RFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISPNV 301
A+ L++ + + P+VV Y+ L+ + + +D R+ +M G+ PNV
Sbjct: 253 LGTGNVEAARKLYERMQELQCKPNVVTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNV 312
Query: 300 YTYTAVIDAMCRAEQMPRANELLCQMID 217
TY A+I++ C RA+ L +M++
Sbjct: 313 NTYGALIESFCGRGNWRRAHATLREMVE 340
>ref|XP_006416414.1| hypothetical protein EUTSA_v10007329mg [Eutrema salsugineum]
gi|557094185|gb|ESQ34767.1| hypothetical protein
EUTSA_v10007329mg [Eutrema salsugineum]
Length = 534
Score = 308 bits (788), Expect = 4e-81
Identities = 159/346 (45%), Positives = 214/346 (61%), Gaps = 1/346 (0%)
Frame = -3
Query: 1041 ATTTLPSVATPISAVKSQLLENLYTLIRDHRRANXXXXXXXXXXXXXXXXXXXXXXXXXX 862
A T + SV+ ++ +Q +E +++I+DH R N
Sbjct: 43 AATAVVSVSPVLTPEDTQTIEKFHSIIKDHYRKNPTNPNDAVLNPSFTLPSLSLDFSQID 102
Query: 861 XXXXXXLAAH-LINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXXPFVAMINFCG 685
+I +C + HG P Q+LAFFNW P+ MI+ G
Sbjct: 103 ASRISPSVVRCVIEKCGGVRHGIPLLQSLAFFNW---ATSRDEYDQKSPHPYNEMIDLAG 159
Query: 684 KHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDAT 505
K HFD+AWHL+D M++ + I+ +TF+ILIRRYVRA L +A RM DYGC PD
Sbjct: 160 KVRHFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKI 219
Query: 504 TFSSLLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMA 325
FS ++++LS+KR+A++AQS FD+ K +F PDV++Y++LV WCRAG++ EAERVF EM
Sbjct: 220 AFSIVISILSRKRRASEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGEISEAERVFKEMK 279
Query: 324 TSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPE 145
+GI PNVYTY+ VIDA+CR Q+ RA+++ MID GC PN TFN+LMRAHVKA R E
Sbjct: 280 VAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMIDCGCAPNAITFNNLMRAHVKAGRTE 339
Query: 144 QVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
+VLQV NQMK+LGCE D ITYN LIE+HC G NL+ A+K+LN M
Sbjct: 340 KVLQVYNQMKKLGCEADTITYNFLIETHCRDG--NLENAVKVLNSM 383
Score = 99.0 bits (245), Expect = 3e-18
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Frame = -3
Query: 663 AWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLA 484
A + +M+ GI T+SI+I R A + M D GC P+A TF++L+
Sbjct: 271 AERVFKEMKVAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMIDCGCAPNAITFNNLMR 330
Query: 483 VLSKKRQAAKAQSLFDAHKHR-FPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISP 307
K + K +++ K D + Y+ L+ CR G L+ A +V M
Sbjct: 331 AHVKAGRTEKVLQVYNQMKKLGCEADTITYNFLIETHCRDGNLENAVKVLNSMIKKRCEV 390
Query: 306 NVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQVK 127
N T+ + + + + A+ + +M++A C NT T+N LMR V+++ + VL++K
Sbjct: 391 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEANTVTYNILMRMFVESKSTDMVLKMK 450
Query: 126 NQMKQLGCEPDVITYNLLIESHCTKG 49
+M + EP+V TY LL+ +C G
Sbjct: 451 KEMDEKEVEPNVNTYRLLVTMYCGMG 476
>ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297336219|gb|EFH66636.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 537
Score = 307 bits (786), Expect = 6e-81
Identities = 158/352 (44%), Positives = 218/352 (61%), Gaps = 5/352 (1%)
Frame = -3
Query: 1047 DNATTTLPSVATPISAV----KSQLLENLYTLIRDHRRANXXXXXXXXXXXXXXXXXXXX 880
++A T V+ P+S++ +Q +E +++I+DH R N
Sbjct: 40 ESAATVTGVVSVPVSSLLTPEDTQTVEKFHSIIKDHYRKNPTNPNDAVLNPSLTLPALSL 99
Query: 879 XXXXXXXXXXXXLAAH-LINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXXPFVA 703
+I +C + HG P HQ+LAFFNW P+
Sbjct: 100 DFSQIDASRISPSVVRCVIEKCGSVRHGIPLHQSLAFFNW---ATSRDDYDQKSPHPYNE 156
Query: 702 MINFCGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYG 523
MI+ GK FD+AWHL+D M++ + I+ +TF+ILIRRYVRA L +A RM DYG
Sbjct: 157 MIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYG 216
Query: 522 CEPDATTFSSLLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAER 343
C PD FS +++ LS+KR+A++AQS FD+ K RF PDV++Y++LV WCRAG++ EAE+
Sbjct: 217 CVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEK 276
Query: 342 VFAEMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHV 163
VF +M +GI PNVYTY+ VIDA+CR Q+ RA+++ M+D+GC PN TFN+LMR HV
Sbjct: 277 VFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHV 336
Query: 162 KARRPEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
KA RPE+VLQV NQMK+LGCEPD ITYN LIE+HC +NL+ A+K+LN M
Sbjct: 337 KAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCR--DENLENAVKVLNTM 386
Score = 58.2 bits (139), Expect = 6e-06
Identities = 40/183 (21%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
Frame = -3
Query: 648 DKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLAVLSKK 469
++M+ LG T++ LI + R + ++A + L M CE +A+TF+++ + KK
Sbjct: 349 NQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKK 408
Query: 468 RQAAKAQSLFD-AHKHRFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISPNVYTY 292
R A ++ + + P+ V Y+ L+ + + D ++ +M + PNV TY
Sbjct: 409 RDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTY 468
Query: 291 TAVIDAMCRAEQMPRANELLCQMIDAGC-PPNTATFNSLMRAHVKARRPEQVLQVKNQMK 115
++ C A +L +M++ C P+ + + ++ +A + ++ ++ +M
Sbjct: 469 RLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMI 528
Query: 114 QLG 106
Q G
Sbjct: 529 QKG 531
>ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity
to a hypothetical protein T3P18.15 gi|5454201 from
Arabidopsis thaliana BAC T3P18 gb|AC005698 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8
[Arabidopsis thaliana] gi|15450347|gb|AAK96467.1|
At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 305 bits (782), Expect = 2e-80
Identities = 159/352 (45%), Positives = 217/352 (61%), Gaps = 5/352 (1%)
Frame = -3
Query: 1047 DNATTTLPSVATPISAV----KSQLLENLYTLIRDHRRANXXXXXXXXXXXXXXXXXXXX 880
++A T +V+ PIS + +Q +E +++I+DH R N
Sbjct: 40 ESAATITAAVSVPISPLLTPEDTQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSL 99
Query: 879 XXXXXXXXXXXXLAAH-LINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXXPFVA 703
+I +C + HG P HQ+LAFFNW P+
Sbjct: 100 DFSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNW---ATSRDDYDHKSPHPYNE 156
Query: 702 MINFCGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYG 523
MI+ GK FD+AWHL+D M++ + I+ +TF+ILIRRYVRA L +A RM DYG
Sbjct: 157 MIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYG 216
Query: 522 CEPDATTFSSLLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAER 343
C PD FS +++ LS+KR+A++AQS FD+ K RF PDV++Y++LV WCRAG++ EAE+
Sbjct: 217 CVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEK 276
Query: 342 VFAEMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHV 163
VF EM +GI PNVYTY+ VIDA+CR Q+ RA+++ M+D+GC PN TFN+LMR HV
Sbjct: 277 VFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHV 336
Query: 162 KARRPEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
KA R E+VLQV NQMK+LGCEPD ITYN LIE+HC +NL+ A+K+LN M
Sbjct: 337 KAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR--DENLENAVKVLNTM 386
Score = 58.9 bits (141), Expect = 4e-06
Identities = 41/183 (22%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
Frame = -3
Query: 648 DKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLAVLSKK 469
++M+ LG T++ LI + R + ++A + L M CE +A+TF+++ + KK
Sbjct: 349 NQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKK 408
Query: 468 RQAAKAQSLFD-AHKHRFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISPNVYTY 292
R A ++ + + P+ V Y+ L+ + + D ++ EM + PNV TY
Sbjct: 409 RDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTY 468
Query: 291 TAVIDAMCRAEQMPRANELLCQMIDAGC-PPNTATFNSLMRAHVKARRPEQVLQVKNQMK 115
++ C A +L +M++ C P+ + + ++ +A + ++ ++ +M
Sbjct: 469 RLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMI 528
Query: 114 QLG 106
Q G
Sbjct: 529 QKG 531
>ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 530
Score = 305 bits (780), Expect = 3e-80
Identities = 161/361 (44%), Positives = 220/361 (60%), Gaps = 3/361 (0%)
Frame = -3
Query: 1080 RRCSFTPSVAVD--NATTTLPSVATPISAVKSQLLENLYTLIRDHRRANXXXXXXXXXXX 907
R CS +P V+ N T P T +S + +++ +T+I+DH R N
Sbjct: 25 RLCSSSPLVSEHDTNDNNTTPQ-NTNLSPEDTHIVDKFHTIIKDHYRKNPNPNAVSPSLN 83
Query: 906 XXXXXXXXXXXXXXXXXXXXXLAAH-LINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXX 730
I +C+ + HG PF Q+LAFFNW
Sbjct: 84 LSIPDLSIEFSKISTVYSVSPSITRRAIEKCSGVRHGIPFLQSLAFFNW----ATTLEGF 139
Query: 729 XXXXXPFVAMINFCGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATE 550
P+ MI+ GK HFD+AWHL+D M++ G+ I TFS+L+RRYVRA L +A
Sbjct: 140 PSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVH 199
Query: 549 ALLRMPDYGCEPDATTFSSLLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCR 370
A RM DYGC+PD +FS +++ L KKR+A++A+ FD+ KH+F PDV++Y+SLVH WCR
Sbjct: 200 AFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHKFEPDVIVYTSLVHGWCR 259
Query: 369 AGKLDEAERVFAEMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTAT 190
AG + +AE VF++M +G+ PNVYTY+ VID++CR Q+ RA+++ +MIDAGC PN T
Sbjct: 260 AGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVT 319
Query: 189 FNSLMRAHVKARRPEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQ 10
FNSLMR HVKA R E+VLQV NQMK+LGC D I+YN LIESHC +NLD A+K+L+
Sbjct: 320 FNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCK--DENLDEAVKVLDT 377
Query: 9 M 7
M
Sbjct: 378 M 378
Score = 110 bits (275), Expect = 1e-21
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Frame = -3
Query: 663 AWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLA 484
A + M+ G+ T+SI+I R A + M D GC+P+A TF+SL+
Sbjct: 266 AEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMR 325
Query: 483 VLSKKRQAAKAQSLFDAHKHR-FPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISP 307
V K + K +++ K D + Y+ L+ + C+ LDEA +V M G++P
Sbjct: 326 VHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAP 385
Query: 306 NVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQVK 127
N T+ ++ + + A+ + +M + C PNT T+N LMR ++ + VL++K
Sbjct: 386 NASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLK 445
Query: 126 NQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
+M + EP+V TY +LI C KG N A L+ +M
Sbjct: 446 KEMDESEVEPNVNTYRILILMFCEKGHWN--NAYNLMKEM 483
>ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Capsella rubella]
gi|482574795|gb|EOA38982.1| hypothetical protein
CARUB_v10011494mg [Capsella rubella]
Length = 532
Score = 304 bits (779), Expect = 4e-80
Identities = 155/348 (44%), Positives = 216/348 (62%), Gaps = 1/348 (0%)
Frame = -3
Query: 1047 DNATTTLPSVATPISAVKSQLLENLYTLIRDHRRANXXXXXXXXXXXXXXXXXXXXXXXX 868
++A ++P ++ ++ +Q E L+++I+DH R N
Sbjct: 40 ESAVVSVP-ISPALTPADTQTAEKLHSIIKDHYRKNPTSSNDAVLNPSLTLPSLSLDFSQ 98
Query: 867 XXXXXXXXLAAH-LINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXXPFVAMINF 691
+I +C + HG P HQ+L+FFNW P+ MI+
Sbjct: 99 IEASRISPSVVQCVIEKCGGVRHGIPLHQSLSFFNW---ATSRDEYDQKSPHPYNEMIDL 155
Query: 690 CGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPD 511
GK FD+AWHL+D M++ + I+ +TF+ILI+RYVRA L +A RM DYGC PD
Sbjct: 156 AGKVRQFDLAWHLIDLMKSRNVEISIETFTILIKRYVRAGLASEAVHCFNRMEDYGCVPD 215
Query: 510 ATTFSSLLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAERVFAE 331
FS ++++LS+KR+A +AQS FD+ K RF PDV++Y++LV WCRAG++ EAERVF E
Sbjct: 216 KIAFSIVISILSRKRRATEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAERVFKE 275
Query: 330 MATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARR 151
M +GI PNVYTY+ VIDA+CR Q+ RA+++ M+D+GC PN TFN+LMR HVKA R
Sbjct: 276 MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGR 335
Query: 150 PEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
E+VLQV NQMK+LGCEPD ITYN LIE+HC +NL+ A+K+LN M
Sbjct: 336 TEKVLQVYNQMKKLGCEPDTITYNFLIETHCR--DENLENAVKVLNTM 381
>ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536913|gb|EEF38551.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 528
Score = 304 bits (779), Expect = 4e-80
Identities = 158/364 (43%), Positives = 219/364 (60%), Gaps = 9/364 (2%)
Frame = -3
Query: 1071 SFTPSVAVDNATTTLPS---------VATPISAVKSQLLENLYTLIRDHRRANXXXXXXX 919
SF+ S+ ++++++ S + +S ++ L ++LI+DH R N
Sbjct: 24 SFSSSITTSSSSSSIISQSQHLEEDYINPSLSFEETTLANKFHSLIKDHHRRNPNFSLPN 83
Query: 918 XXXXXXXXXXXXXXXXXXXXXXXXXLAAHLINRCAFLHHGAPFHQTLAFFNWWXXXXXXX 739
+H+I +CA + HG PF Q L+FFNW
Sbjct: 84 TPSHSLSLDFSHFSTSPVSPSL----VSHVIEKCAAVRHGIPFFQALSFFNW----ATSR 135
Query: 738 XXXXXXXXPFVAMINFCGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDD 559
P+ MI+ GK +FD+ W ++D M+A + I+ +TFSILIRRYVRA L +
Sbjct: 136 PGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASE 195
Query: 558 ATEALLRMPDYGCEPDATTFSSLLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHA 379
A A RM DY C+PD FS L+++L +KR+A +AQS FD+ K +F PDV++Y++LV
Sbjct: 196 AVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKFEPDVIVYTNLVRG 255
Query: 378 WCRAGKLDEAERVFAEMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPN 199
WCRAG + EAERVF EM +G PNVYTYT VIDA+CR Q+ RA+++ +M+D GC PN
Sbjct: 256 WCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPN 315
Query: 198 TATFNSLMRAHVKARRPEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKL 19
+ TFN+L+R HVKA R E+VLQV NQMK++GC PD +TYN LIESHC G NLD ALK+
Sbjct: 316 SITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDG--NLDEALKV 373
Query: 18 LNQM 7
LN M
Sbjct: 374 LNSM 377
Score = 115 bits (288), Expect = 3e-23
Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 1/209 (0%)
Frame = -3
Query: 663 AWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLA 484
A + +M+ G T++I+I R A + M D GCEP++ TF++LL
Sbjct: 265 AERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLR 324
Query: 483 VLSKKRQAAKAQSLFDAHKHR-FPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISP 307
V K + K +++ K PPD V Y+ L+ + C+ G LDEA +V M G SP
Sbjct: 325 VHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSP 384
Query: 306 NVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQVK 127
N T+ + ++ + + A+ L +M + C NT T+N LMR V + + VL++K
Sbjct: 385 NASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLK 444
Query: 126 NQMKQLGCEPDVITYNLLIESHCTKGQKN 40
+M + EP+V TY +LI +C G N
Sbjct: 445 KEMDEDDVEPNVNTYCVLIAMYCGMGHWN 473
>ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 303 bits (777), Expect = 7e-80
Identities = 150/275 (54%), Positives = 191/275 (69%)
Frame = -3
Query: 831 LINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXXPFVAMINFCGKHHHFDIAWHL 652
+I +C + HG PF QTLAFFNW P++ MI+ GK FD+AW L
Sbjct: 113 VIEKCGGVRHGIPFPQTLAFFNW----ATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQL 168
Query: 651 LDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLAVLSK 472
+D M+ + I +TF+IL+RRYV+A L +A A RM DYGC+PD FS +++ LSK
Sbjct: 169 IDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSK 228
Query: 471 KRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISPNVYTY 292
KR+A +AQS FD+ K RF PDVV+Y+SLVH WCRAG + EAERVF EM +GI PNVYTY
Sbjct: 229 KRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTY 288
Query: 291 TAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQVKNQMKQ 112
+ VIDA+CR+ Q+ RA+++ +MID GC PN TFN+LMR HVKA R E+VLQV NQMK+
Sbjct: 289 SIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKR 348
Query: 111 LGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
LGC PD ITYN LIESHC NL+ A+K+LN +
Sbjct: 349 LGCPPDAITYNFLIESHCR--DDNLEEAVKILNSV 381
Score = 100 bits (248), Expect = 1e-18
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 1/209 (0%)
Frame = -3
Query: 663 AWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLA 484
A + +M+ GI T+SI+I R+ A + M D GC+P+A TF++L+
Sbjct: 269 AERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMR 328
Query: 483 VLSKKRQAAKAQSLFDAHKHR-FPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISP 307
V K + K +++ K PPD + Y+ L+ + CR L+EA ++ + G +
Sbjct: 329 VHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVK-KGCNL 387
Query: 306 NVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQVK 127
N ++ + + + + A+ + +M D C PNT T+N LMR + + VL+++
Sbjct: 388 NASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLR 447
Query: 126 NQMKQLGCEPDVITYNLLIESHCTKGQKN 40
+M + EP+ TY +LI + C G N
Sbjct: 448 KEMDENEIEPNANTYRVLISTFCGIGHWN 476
>emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 303 bits (776), Expect = 9e-80
Identities = 150/275 (54%), Positives = 191/275 (69%)
Frame = -3
Query: 831 LINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXXPFVAMINFCGKHHHFDIAWHL 652
+I +C + HG PF QTLAFFNW P++ MI+ GK FD+AW L
Sbjct: 1145 VIEKCGGVRHGIPFPQTLAFFNW----ATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQL 1200
Query: 651 LDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLAVLSK 472
+D M+ + I +TF+IL+RRYV+A L +A A RM DYGC+PD FS +++ LSK
Sbjct: 1201 IDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSK 1260
Query: 471 KRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISPNVYTY 292
KR+A +AQS FD+ K RF PDVV+Y+SLVH WCRAG + EAERVF EM +GI PNVYTY
Sbjct: 1261 KRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTY 1320
Query: 291 TAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQVKNQMKQ 112
+ VIDA+CR+ Q+ RA+++ +MID GC PN TFN+LMR HVKA R E+VLQV NQMK+
Sbjct: 1321 SIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKR 1380
Query: 111 LGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
LGC PD ITYN LIESHC NL+ A+K+LN +
Sbjct: 1381 LGCPPDAITYNFLIESHCR--DDNLEEAVKILNSV 1413
Score = 100 bits (248), Expect = 1e-18
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 1/209 (0%)
Frame = -3
Query: 663 AWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLA 484
A + +M+ GI T+SI+I R+ A + M D GC+P+A TF++L+
Sbjct: 1301 AERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMR 1360
Query: 483 VLSKKRQAAKAQSLFDAHKHR-FPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISP 307
V K + K +++ K PPD + Y+ L+ + CR L+EA ++ + G +
Sbjct: 1361 VHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVK-KGCNL 1419
Query: 306 NVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQVK 127
N ++ + + + + A+ + +M D C PNT T+N LMR + + VL+++
Sbjct: 1420 NASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLR 1479
Query: 126 NQMKQLGCEPDVITYNLLIESHCTKGQKN 40
+M + EP+ TY +LI + C G N
Sbjct: 1480 KEMDENEIEPNANTYRVLISTFCGIGHWN 1508
>ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Populus trichocarpa]
gi|550339796|gb|EEE94747.2| hypothetical protein
POPTR_0005s26670g [Populus trichocarpa]
Length = 533
Score = 301 bits (771), Expect = 3e-79
Identities = 154/348 (44%), Positives = 213/348 (61%), Gaps = 1/348 (0%)
Frame = -3
Query: 1047 DNATTTLPSVATPISAVKSQLLENLYTLIRDHRRANXXXXXXXXXXXXXXXXXXXXXXXX 868
D+ T+ + TP+S ++ + E L++LI+DH R N
Sbjct: 41 DDEEHTIKTPKTPLSPEETSVAEKLHSLIKDHYRNNPNKTLPPDPTYTIPSLSLDFSQTI 100
Query: 867 XXXXXXXXLAA-HLINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXXPFVAMINF 691
H+I + + HG P Q LAFFNW F M++F
Sbjct: 101 STVHSISPSIIRHVIEQSGGVRHGIPVPQVLAFFNW----ASYQDGFDKSPEAFNEMVDF 156
Query: 690 CGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPD 511
GK FD+AWH++D M+A + I +TFSIL+RRYVRA L +A A RM DY C+PD
Sbjct: 157 AGKVRMFDLAWHVIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPD 216
Query: 510 ATTFSSLLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAERVFAE 331
FS L+++L +KR+A++AQ FD+ K +F PDV++Y++LV WCRAG + EAERVF E
Sbjct: 217 KIAFSILISILCRKRRASEAQEFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGE 276
Query: 330 MATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARR 151
M +GI PNVYTY+ VID++CR Q+ RA+++ +M+DAGC PN+ T+NSLMR HVKA R
Sbjct: 277 MKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGR 336
Query: 150 PEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
E+VLQV NQMK+LGCEPD +TYN LIE+HC +NL+ A+K++ M
Sbjct: 337 TEKVLQVYNQMKRLGCEPDTVTYNFLIETHCK--DENLEDAIKVIGLM 382
Score = 105 bits (263), Expect = 3e-20
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 1/209 (0%)
Frame = -3
Query: 663 AWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLA 484
A + +M+ GI T+SI+I R A + M D GC+P++ T++SL+
Sbjct: 270 AERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMR 329
Query: 483 VLSKKRQAAKAQSLFDAHKHR-FPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISP 307
+ K + K +++ K PD V Y+ L+ C+ L++A +V MA G +P
Sbjct: 330 IHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAP 389
Query: 306 NVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQVK 127
N T+ + + + + A+ + +M + C NT T+N+LM+ V ++ + VL++K
Sbjct: 390 NASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLK 449
Query: 126 NQMKQLGCEPDVITYNLLIESHCTKGQKN 40
+M + EP+V TY +LI +C G N
Sbjct: 450 TEMDENKIEPNVNTYKVLITMYCGMGHWN 478
Score = 60.8 bits (146), Expect = 1e-06
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 2/183 (1%)
Frame = -3
Query: 648 DKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLAVLSKK 469
++M+ LG T++ LI + + + +DA + + M GC P+A+TF++L ++K
Sbjct: 345 NQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKL 404
Query: 468 RQAAKAQSLFDAHKH-RFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISPNVYTY 292
A ++ K + V Y++L+ + + D ++ EM + I PNV TY
Sbjct: 405 GDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTY 464
Query: 291 TAVIDAMCRAEQMPRANELLCQMIDAGC-PPNTATFNSLMRAHVKARRPEQVLQVKNQMK 115
+I C A + +MID C P+ ++ +++ KA + ++ ++ +M
Sbjct: 465 KVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQLRKAGQLKKHEELVEKMV 524
Query: 114 QLG 106
G
Sbjct: 525 DRG 527
>gb|EOY15135.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
Length = 532
Score = 300 bits (767), Expect = 1e-78
Identities = 158/343 (46%), Positives = 209/343 (60%), Gaps = 3/343 (0%)
Frame = -3
Query: 1026 PSVATPISAVKSQLLENLYTLIRDHRRANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 847
P +A +S ++++ E ++LI+DH R N
Sbjct: 46 PKIAA-LSPEEAEVAEKFHSLIKDHHRKNPNPDLNSAPPTPDFTIPSLSLDFSKISAVHS 104
Query: 846 XLAA---HLINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXXPFVAMINFCGKHH 676
+ H+I++C + HG PF QTL+FFNW P+ MI+ GK
Sbjct: 105 ISPSLVRHVIDKCGGVRHGIPFLQTLSFFNW----ATTRPDFASSPDPYNEMIDLAGKLR 160
Query: 675 HFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFS 496
HFD+AWHL+D M+A + ++ +TFSILIRRYVRA L +A A RM DYGC PD FS
Sbjct: 161 HFDLAWHLIDLMKAKNVDVSIETFSILIRRYVRAGLAAEAVHAFNRMEDYGCVPDKIAFS 220
Query: 495 SLLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSG 316
+++ L KKR+A +AQ+ FD K F PDV++Y+SL++ WCRA + EAERVF EM +G
Sbjct: 221 IVISSLCKKRRAEEAQTFFDKLKDNFEPDVILYTSLINGWCRARNISEAERVFKEMKMAG 280
Query: 315 ISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVL 136
I PNVY+YT VIDA+CR Q+ RA+++ +MID GC PN+ TFN+LMR HVKA R E+VL
Sbjct: 281 IKPNVYSYTIVIDALCRCGQITRAHDVFAEMIDVGCEPNSITFNNLMRVHVKAGRTEKVL 340
Query: 135 QVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
QV NQMK+ GC D ITYN LIESHC NLD A+K+LN M
Sbjct: 341 QVYNQMKRCGCPADTITYNFLIESHCR--DDNLDEAIKVLNLM 381
Score = 114 bits (285), Expect = 8e-23
Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 1/236 (0%)
Frame = -3
Query: 711 FVAMINFCGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMP 532
+ ++IN + + A + +M+ GI +++I+I R A + M
Sbjct: 253 YTSLINGWCRARNISEAERVFKEMKMAGIKPNVYSYTIVIDALCRCGQITRAHDVFAEMI 312
Query: 531 DYGCEPDATTFSSLLAVLSKKRQAAKAQSLFDAHKH-RFPPDVVIYSSLVHAWCRAGKLD 355
D GCEP++ TF++L+ V K + K +++ K P D + Y+ L+ + CR LD
Sbjct: 313 DVGCEPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRCGCPADTITYNFLIESHCRDDNLD 372
Query: 354 EAERVFAEMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLM 175
EA +V M PN T+ + + + + + A+ + +M D C PNT T+N LM
Sbjct: 373 EAIKVLNLMIKKECIPNPSTFNTIFKCIEKLQDVNAAHRMYAKMKDLNCRPNTVTYNILM 432
Query: 174 RAHVKARRPEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
R A+ + VL++K +M + EP+V TY +LI +C KG N A K N+M
Sbjct: 433 RMFAGAKSTDMVLKLKKEMDENEVEPNVNTYRILITMYCGKGHWN--NAYKFFNEM 486
>ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cicer arietinum]
Length = 530
Score = 300 bits (767), Expect = 1e-78
Identities = 156/349 (44%), Positives = 213/349 (61%), Gaps = 3/349 (0%)
Frame = -3
Query: 1044 NATTTLPSVATPISAVKSQLLENLYTLIRDHRRANXXXXXXXXXXXXXXXXXXXXXXXXX 865
N T P T +S +SQ+++ +T I+DH N
Sbjct: 37 NDTNETPQNTTNLSPEESQIVDKFHTAIKDHYSKNPNPNPNPLPPSLNLSIPDLSIDFTK 96
Query: 864 XXXXXXXL---AAHLINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXXPFVAMIN 694
A +I +C + HG PF QTLAFFN+ P+ MI+
Sbjct: 97 ISTVHSISPSIARRVIEKCGGVRHGNPFLQTLAFFNY----ATTLEGFPSSPEPYNEMID 152
Query: 693 FCGKHHHFDIAWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEP 514
GK HF++AW+L+D M++ G+ I TF++L+RRYVRA L +A A RM +YGC P
Sbjct: 153 LAGKLRHFELAWNLIDLMKSRGVKITVGTFAVLVRRYVRAGLAAEAVHAFNRMEEYGCTP 212
Query: 513 DATTFSSLLAVLSKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAERVFA 334
D FS +++ L KKR+A++AQ FD+ KHRF PDV++Y+SLVH WCRAG + +AE VF+
Sbjct: 213 DKVAFSIVISSLCKKRRASEAQLFFDSLKHRFEPDVIVYTSLVHGWCRAGNISKAEEVFS 272
Query: 333 EMATSGISPNVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKAR 154
+M +GI PNVYTY+ VID++CR+ Q+ RA+++ +MIDAGC PN TFNSLMR HVKA
Sbjct: 273 DMKVAGIKPNVYTYSIVIDSLCRSGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAG 332
Query: 153 RPEQVLQVKNQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
R E+VLQV NQMK+LGC D I+YN +IESHC +NLD A+K+L+ M
Sbjct: 333 RTEKVLQVYNQMKRLGCAADTISYNFIIESHCK--DENLDEAVKVLDTM 379
Score = 114 bits (284), Expect = 1e-22
Identities = 68/220 (30%), Positives = 111/220 (50%), Gaps = 1/220 (0%)
Frame = -3
Query: 663 AWHLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLA 484
A + M+ GI T+SI+I R+ A + M D GC+P+A TF+SL+
Sbjct: 267 AEEVFSDMKVAGIKPNVYTYSIVIDSLCRSGQITRAHDVFSEMIDAGCDPNAVTFNSLMR 326
Query: 483 VLSKKRQAAKAQSLFDAHKHR-FPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISP 307
V K + K +++ K D + Y+ ++ + C+ LDEA +V M G+ P
Sbjct: 327 VHVKAGRTEKVLQVYNQMKRLGCAADTISYNFIIESHCKDENLDEAVKVLDTMVKKGVDP 386
Query: 306 NVYTYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQVK 127
N T+ ++ + + A+ + +M + C PNT T+N LMR V ++ + VL++K
Sbjct: 387 NASTFNSIFGCIAELHDVNGAHRMYAKMKELKCRPNTLTYNILMRMFVDSKSIDMVLKLK 446
Query: 126 NQMKQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
+M + EP+V TY +LI C KG N A KL+ +M
Sbjct: 447 KEMDESQVEPNVNTYRILILMFCEKGHWN--NAYKLMKEM 484
>ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Solanum tuberosum]
Length = 549
Score = 298 bits (764), Expect = 2e-78
Identities = 155/337 (45%), Positives = 203/337 (60%), Gaps = 3/337 (0%)
Frame = -3
Query: 1008 ISAVKSQLLENLYTLIRDHRRANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL---A 838
+S ++Q+ E +++LI+DH R N
Sbjct: 66 LSEEEAQIAEKIHSLIKDHHRKNPTATPTSIPLNPNITFPTLSFDFSSISDNRSISPPVV 125
Query: 837 AHLINRCAFLHHGAPFHQTLAFFNWWXXXXXXXXXXXXXXXPFVAMINFCGKHHHFDIAW 658
+ +I +C + HG PF Q LAFFNW P+ MI+ GK FD+AW
Sbjct: 126 SRVIEKCGSVRHGIPFSQALAFFNW--AAVRDSCGSFLNPEPYNEMIDLAGKVRQFDVAW 183
Query: 657 HLLDKMRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLAVL 478
HL+D M+ I I +TFSILIRRYVRA L +A RM DY C+PD FS ++ +L
Sbjct: 184 HLIDSMKLKNIKIPIETFSILIRRYVRAGLASEAVHTFNRMEDYDCKPDRNAFSIVIGIL 243
Query: 477 SKKRQAAKAQSLFDAHKHRFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISPNVY 298
KKR+AA+AQS FD+ K +F DVV+Y+SLVH WCRAG + EAER+F +M +G+ PNVY
Sbjct: 244 CKKRRAAEAQSFFDSLKDKFEADVVLYTSLVHGWCRAGNISEAERIFRDMKDAGVQPNVY 303
Query: 297 TYTAVIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQVKNQM 118
TY+ VIDA+CR+ Q RA ++ +MID GC PN TFN+LMR HVKA R E+VLQV NQM
Sbjct: 304 TYSIVIDALCRSGQTTRAYDVFSEMIDVGCQPNAITFNNLMRVHVKAGRTEKVLQVYNQM 363
Query: 117 KQLGCEPDVITYNLLIESHCTKGQKNLDAALKLLNQM 7
K+L C PDVITYN LI++HC +N D ALK++N M
Sbjct: 364 KRLSCSPDVITYNFLIDAHCR--DENRDEALKVVNVM 398
Score = 109 bits (273), Expect = 2e-21
Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 1/202 (0%)
Frame = -3
Query: 642 MRALGIPIANQTFSILIRRYVRADLPDDATEALLRMPDYGCEPDATTFSSLLAVLSKKRQ 463
M+ G+ T+SI+I R+ A + M D GC+P+A TF++L+ V K +
Sbjct: 293 MKDAGVQPNVYTYSIVIDALCRSGQTTRAYDVFSEMIDVGCQPNAITFNNLMRVHVKAGR 352
Query: 462 AAKAQSLFDAHKH-RFPPDVVIYSSLVHAWCRAGKLDEAERVFAEMATSGISPNVYTYTA 286
K +++ K PDV+ Y+ L+ A CR DEA +V MA PN T+
Sbjct: 353 TEKVLQVYNQMKRLSCSPDVITYNFLIDAHCRDENRDEALKVVNVMAKKRCEPNASTFNP 412
Query: 285 VIDAMCRAEQMPRANELLCQMIDAGCPPNTATFNSLMRAHVKARRPEQVLQVKNQMKQLG 106
+ + +A + A+ L +M + C PNT T N LM+ V+++ + V++++ +M +
Sbjct: 413 IFRCIAKARDVNAAHRLYAKMKELNCKPNTVTCNILMKMFVESKSTDMVIKLRKEMDENE 472
Query: 105 CEPDVITYNLLIESHCTKGQKN 40
EP+V T+ +LI +C G N
Sbjct: 473 VEPNVNTFKILISMYCGMGHWN 494