BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00014253
         (1889 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ26328.1| hypothetical protein PRUPE_ppa002557mg [Prunus pe...   723   0.0  
gb|EOY01103.1| Cleavage and polyadenylation specificity factor 7...   721   0.0  
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec...   709   0.0  
ref|XP_002314781.2| metallo-beta-lactamase family protein [Popul...   706   0.0  
ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citr...   706   0.0  
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec...   700   0.0  
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec...   698   0.0  
ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   696   0.0  
ref|XP_006661200.1| PREDICTED: cleavage and polyadenylation spec...   682   0.0  
ref|NP_001063107.1| Os09g0397900 [Oryza sativa Japonica Group] g...   676   0.0  
gb|AAS80153.1| ACT11D09.9 [Cucumis melo]                              676   0.0  
ref|XP_004956755.1| PREDICTED: cleavage and polyadenylation spec...   667   0.0  
ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation spec...   667   0.0  
ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation spec...   662   0.0  
ref|XP_002455960.1| hypothetical protein SORBIDRAFT_03g028040 [S...   661   0.0  
ref|XP_004498247.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and...   658   0.0  
tpg|DAA58566.1| TPA: putative RNA-metabolising metallo-beta-lact...   640   0.0  
ref|XP_006395858.1| hypothetical protein EUTSA_v10005303mg [Eutr...   640   0.0  
ref|XP_006290841.1| hypothetical protein CARUB_v10016952mg [Caps...   637   e-180
ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and...   635   e-179

>gb|EMJ26328.1| hypothetical protein PRUPE_ppa002557mg [Prunus persica]
          Length = 658

 Score =  723 bits (1866), Expect = 0.0
 Identities = 366/579 (63%), Positives = 433/579 (74%), Gaps = 13/579 (2%)
 Frame = -1

Query: 1889 RGPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDK 1710
            RGPIYMTYPTKALAP+MLEDYRKV+V+RRGEEE F+ DHI ECMKKVIP+D+KQT+QVDK
Sbjct: 89   RGPIYMTYPTKALAPIMLEDYRKVMVERRGEEEQFSSDHIAECMKKVIPVDLKQTVQVDK 148

Query: 1709 DLEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTY 1530
            DL+IRAYYAGHVLGAAM YAKVG++ ++YTGDYNMTPDRHLGAAQI+RL LDL+I+ESTY
Sbjct: 149  DLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIERLNLDLLISESTY 208

Query: 1529 ATTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIY 1350
             TTIRDSKYAREREFL+AVHKCVAGGGKVLIPTFALGRAQELCILL+DYWERM LKVPIY
Sbjct: 209  GTTIRDSKYAREREFLRAVHKCVAGGGKVLIPTFALGRAQELCILLEDYWERMNLKVPIY 268

Query: 1349 FSAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPG 1170
            FSAGLT+QANMYYKM I W SQK+K+T S RN +DFK+    DRS++NAPGPCVLFATPG
Sbjct: 269  FSAGLTLQANMYYKMLISWTSQKVKETYSTRNAFDFKNAHKFDRSMINAPGPCVLFATPG 328

Query: 1169 MISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIH 990
            MISGGFSLEVFK WAPSE+NLVTLPGYCVAGTIGHKLMSGKPTK+DLDK+TQIDVRCQIH
Sbjct: 329  MISGGFSLEVFKHWAPSEMNLVTLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVRCQIH 388

Query: 989  QLSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVL 810
             LSFSPHTDAKGIMDLI FLSPK+V+LVHGEKPKMA+L+ +IQSEL I C  PANNE V 
Sbjct: 389  HLSFSPHTDAKGIMDLIKFLSPKNVILVHGEKPKMATLKGKIQSELGIQCHDPANNETVS 448

Query: 809  IPTTPSVKVGATKMFIRRCSTSTL----GKTDDKLLISCSTSN--------EASGARGIL 666
            I +T  VK  A+  FIR CS           +D+   +   +N        +   A G+L
Sbjct: 449  ISSTHYVKALASDAFIRSCSNPNFKFSKSSQEDEHGSNSRNNNFTPRLRVSDERVAEGVL 508

Query: 665  VMEKTKTAKIIDEDELVHTLGLEEHKVLYALCCPVEFSTM-ELATNEANIISLCESSLMV 489
            VME+ K AK++ +DEL+  LG ++H+V +A CCP +   + E  ++  N   LC+S    
Sbjct: 509  VMERNKKAKVVHQDELLLMLGEKKHQVQFAYCCPADIGHLGETKSSTTNDGQLCKSE--- 565

Query: 488  VDVPTSSTTEDVNSAENRSSLHSLLVKFRAKIDCTNIQVAPAHLQLRSFHVSVCSNEDCK 309
                T S             L  L  K   +    NIQ    HLQ+ SFHVS+C   +C 
Sbjct: 566  ----TCSRL-----------LRQLSAKLSNEFSQGNIQDFEDHLQVESFHVSICLKNNCP 610

Query: 308  YRMKNKNGIPKSMVYFCCRWSPVDDKFARELLQIMEQLN 192
            YR+ +     +   +FCC W   D+K A +++ I +  N
Sbjct: 611  YRLMDVQNKSQEAAFFCCSWGTADEKLAWKIISICQNFN 649


>gb|EOY01103.1| Cleavage and polyadenylation specificity factor 73 kDa subunit-II
            [Theobroma cacao]
          Length = 657

 Score =  721 bits (1862), Expect = 0.0
 Identities = 368/577 (63%), Positives = 437/577 (75%), Gaps = 14/577 (2%)
 Frame = -1

Query: 1889 RGPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDK 1710
            RGP+YMTYPTKALAPLMLEDYRK + DRRGE+  FT DHI ECMKKVIP+D+KQT+QVDK
Sbjct: 86   RGPVYMTYPTKALAPLMLEDYRKNM-DRRGEDGQFTSDHITECMKKVIPVDLKQTVQVDK 144

Query: 1709 DLEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTY 1530
            DL+IRAYYAGHVLGAAM YAKVG++ ++YTGDYNMTPDRHLGAAQIDRLQLDL+ITESTY
Sbjct: 145  DLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTY 204

Query: 1529 ATTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIY 1350
            ATTIRDS+Y REREFLKAVH CVA GGKVLIPTFALGRAQELCILL+DYWERM LKVPIY
Sbjct: 205  ATTIRDSRYGREREFLKAVHNCVAAGGKVLIPTFALGRAQELCILLEDYWERMNLKVPIY 264

Query: 1349 FSAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPG 1170
            FS+GLTIQANMYYKM I W SQKIK+T +  N +DFK+V   DRSL+NAPGPCVLFATPG
Sbjct: 265  FSSGLTIQANMYYKMLINWTSQKIKETYATHNAFDFKNVQNFDRSLINAPGPCVLFATPG 324

Query: 1169 MISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIH 990
            MISGGFSLEVF QWAPSE+NL+TLPGYCVAGTIGHKLMSGKPTK+DLDK+TQ+DVRCQIH
Sbjct: 325  MISGGFSLEVFMQWAPSEINLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQVDVRCQIH 384

Query: 989  QLSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVL 810
            QLSFSPHTDAKGIMDL+ FLSPKH +LVHGEKPKMA+L+ERIQSEL I C  PANN+ V 
Sbjct: 385  QLSFSPHTDAKGIMDLVKFLSPKHAILVHGEKPKMATLKERIQSELGIQCYCPANNDTVT 444

Query: 809  IPTTPSVKVGATKMFIRRC-------------STSTLGKTDDKLLISCSTSNEASGARGI 669
            IPTT  VK  A+  FI+ C               S  G  D K +     S+E   A GI
Sbjct: 445  IPTTHYVKADASDAFIKSCLNPNFKFSKSSSVDKSYSGSNDSKAIPGLQVSDERV-AEGI 503

Query: 668  LVMEKTKTAKIIDEDELVHTLGLEEHKVLYALCCPVEFSTMELATNEANIISLCESSLMV 489
            LV+EK K AK+I +DEL+H LG  +H+V +A C P+    +E   +E             
Sbjct: 504  LVVEKGKKAKVIHQDELLHMLGENKHEVQFAYCFPMRTERLEKTRSE------------- 550

Query: 488  VDVPTSSTTEDVNSAENRSSLHSLL-VKFRAKIDCTNIQVAPAHLQLRSFHVSVCSNEDC 312
             D+P++   +D+    ++ +L SLL  K   ++   NIQ     LQ+ SF +S+C  ++C
Sbjct: 551  -DLPSA---DDLLCGLDKCTLISLLSTKLSNELSDGNIQDLGEQLQVESFCLSICLKDNC 606

Query: 311  KYRMKNKNGIPKSMVYFCCRWSPVDDKFARELLQIME 201
             +R+ +       +V+FCC WS  D+  A +++ IM+
Sbjct: 607  PHRISDSLQNDSEVVFFCCSWSVADEMLAWKIISIMK 643


>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-II-like [Citrus sinensis]
          Length = 1019

 Score =  709 bits (1829), Expect = 0.0
 Identities = 368/575 (64%), Positives = 435/575 (75%), Gaps = 13/575 (2%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GPIYMTYPT+ALAP+MLEDYRKV+VDRRGE E FT DHI ECMKKVI +D+KQT+QVDKD
Sbjct: 87   GPIYMTYPTRALAPIMLEDYRKVLVDRRGEVEQFTSDHIAECMKKVIAVDLKQTVQVDKD 146

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L+IRAYYAGHVLGAAM YAKVG+S ++YTGDYNMTPDRHLGAA+IDRLQLDL+ITESTYA
Sbjct: 147  LQIRAYYAGHVLGAAMFYAKVGDSAMVYTGDYNMTPDRHLGAARIDRLQLDLLITESTYA 206

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
            TT+RDSKYAREREFLKAVHKCVAGGGKVLIP FALGRAQELCILLDDYWERM L+VPIYF
Sbjct: 207  TTVRDSKYAREREFLKAVHKCVAGGGKVLIPAFALGRAQELCILLDDYWERMNLRVPIYF 266

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            SAGLTIQANMYYKM I W SQK+K+T    N +DFK+V   DRSL++APGPCVLFATPGM
Sbjct: 267  SAGLTIQANMYYKMLISWTSQKVKET---YNAFDFKNVHNFDRSLIDAPGPCVLFATPGM 323

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIHQ 987
            ++GGFSLEVFK WAPSE+NL+TLPGYC+AGTIG+KLMSG PT ++L+  T+IDVRCQIHQ
Sbjct: 324  LTGGFSLEVFKHWAPSEMNLITLPGYCLAGTIGNKLMSGNPT-IELE-GTKIDVRCQIHQ 381

Query: 986  LSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVLI 807
            L+FSPHTD KGIMDL+ FLSP+HV+LVHGEKPKMA+L+ERIQSEL I C  PANNE + I
Sbjct: 382  LAFSPHTDGKGIMDLVKFLSPQHVILVHGEKPKMATLKERIQSELGIKCYDPANNESMCI 441

Query: 806  PTTPSVKVGATKMFIRRCSTST---LGKTDDKLLISCSTSNEAS---------GARGILV 663
            P+T  VK GA+  FIR C       L    ++  +S S   E +          A GILV
Sbjct: 442  PSTHYVKAGASDAFIRSCMNPNFQYLKSGSEEKSVSGSKCTEGTLPLWIKDERVAEGILV 501

Query: 662  MEKTKTAKIIDEDELVHTLGLEEHKVLYALCCPVEFSTMELATNEANIISLCESSLMVVD 483
            +EK++ AK++ +DEL+  LG + H+V +A CCPV    +E  T      SL  ++ M+ D
Sbjct: 502  LEKSEKAKVVHQDELLLMLGEKRHEVQFAYCCPVNVDELEKFTT----TSLTPTARMLRD 557

Query: 482  VPTSSTTEDVNSAENRSSLHSLLV-KFRAKIDCTNIQVAPAHLQLRSFHVSVCSNEDCKY 306
                          N+SSL  LLV K   K+   NIQ    HLQ+ SFH+SVC  + C Y
Sbjct: 558  -------------PNKSSLIRLLVAKLSRKLSEGNIQDFGEHLQVESFHLSVCLKDTCPY 604

Query: 305  RMKNKNGIPKSMVYFCCRWSPVDDKFARELLQIME 201
            R+ N         +FCC WS  DDK AR+++  ME
Sbjct: 605  RITNGLEDKPRTAFFCCTWSAADDKLARKIISAME 639


>ref|XP_002314781.2| metallo-beta-lactamase family protein [Populus trichocarpa]
            gi|550329586|gb|EEF00952.2| metallo-beta-lactamase family
            protein [Populus trichocarpa]
          Length = 625

 Score =  706 bits (1823), Expect = 0.0
 Identities = 356/556 (64%), Positives = 421/556 (75%), Gaps = 12/556 (2%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GPIYMTYPTKALAPLMLED+RKV+VDRRGEEE FT  HI +CM+KVI +D+KQT+QVD D
Sbjct: 87   GPIYMTYPTKALAPLMLEDFRKVLVDRRGEEEQFTSLHISQCMEKVIAVDLKQTVQVDDD 146

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L+IRAYYAGHVLGAAM YAKVG+S ++YTGDYNMTPDRHLGAAQIDRL+LDL+ITESTYA
Sbjct: 147  LQIRAYYAGHVLGAAMFYAKVGDSAMVYTGDYNMTPDRHLGAAQIDRLELDLLITESTYA 206

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
            TTIRDSKYAREREFLKAVH+CVAGGGKVLIPTFALGRAQELCILLDDYWERM LKVPIYF
Sbjct: 207  TTIRDSKYAREREFLKAVHECVAGGGKVLIPTFALGRAQELCILLDDYWERMNLKVPIYF 266

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            SAGLTIQAN+YYK+ I W SQK+K+T + RN +DFKHV   DRSL+NAPGPCVLFATPGM
Sbjct: 267  SAGLTIQANLYYKILISWTSQKVKETYATRNAFDFKHVHNFDRSLINAPGPCVLFATPGM 326

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIHQ 987
            ISGGFSLEVFKQWAP E+NL+TLPGYCVAGT+GHKLMSGKPTK++LDK+TQIDVRCQIHQ
Sbjct: 327  ISGGFSLEVFKQWAPCEMNLITLPGYCVAGTVGHKLMSGKPTKINLDKDTQIDVRCQIHQ 386

Query: 986  LSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVLI 807
            LSFSPHTD+KGIMDL  FLSP++V+LVHGEKPKM SL+ERIQ+ELRIPC  PAN + V I
Sbjct: 387  LSFSPHTDSKGIMDLTKFLSPRNVILVHGEKPKMVSLKERIQTELRIPCYLPANCDAVHI 446

Query: 806  PTTPSVKVGATKMFIRRCSTSTL-----GKTDDKLLISCSTS-------NEASGARGILV 663
            P+T  VK  A+  FIR C           K D+   +  +T+       N+   A GIL+
Sbjct: 447  PSTIYVKAHASNTFIRSCLNPNFRFLKRSKEDNSDQVLRNTNPTAPLQVNDERVAEGILI 506

Query: 662  MEKTKTAKIIDEDELVHTLGLEEHKVLYALCCPVEFSTMELATNEANIISLCESSLMVVD 483
            MEK K A+++ +D+L+  L  ++H V +A CC  +   +E   N  + + L         
Sbjct: 507  MEKGKKARVVHQDDLLLMLRQKKHDVQFAYCCAAQLDNLEETRNRDDALGL--------- 557

Query: 482  VPTSSTTEDVNSAENRSSLHSLLVKFRAKIDCTNIQVAPAHLQLRSFHVSVCSNEDCKYR 303
                        ++  SSL  L  +        NI+    HLQ+ SFHVSVC  ++C YR
Sbjct: 558  ------------SDKCSSLQLLFKELSNYFSGVNIEDLGEHLQVESFHVSVCLKDNCPYR 605

Query: 302  MKNKNGIPKSMVYFCC 255
            + + +      VYFCC
Sbjct: 606  IIDNSQKEAVTVYFCC 621


>ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citrus clementina]
            gi|557550770|gb|ESR61399.1| hypothetical protein
            CICLE_v10014563mg [Citrus clementina]
          Length = 646

 Score =  706 bits (1822), Expect = 0.0
 Identities = 367/575 (63%), Positives = 434/575 (75%), Gaps = 13/575 (2%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GPIYMTYPT+ALAP+MLEDYRKV+VDRRGE E FT DHI ECMKKVI +D+KQT+QVDKD
Sbjct: 87   GPIYMTYPTRALAPIMLEDYRKVLVDRRGEVEQFTSDHIAECMKKVIAVDLKQTVQVDKD 146

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L+IRAYYAGHVLGAAM YAKVG+S ++YTGDYNMTPDRHLGAA+IDRLQLDL+ITESTYA
Sbjct: 147  LQIRAYYAGHVLGAAMFYAKVGDSAMVYTGDYNMTPDRHLGAARIDRLQLDLLITESTYA 206

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
            TT+RDSKYAREREFLKAVHKCVAGGGKVLIP FALGRAQELCILLDDYWERM L+VPIYF
Sbjct: 207  TTVRDSKYAREREFLKAVHKCVAGGGKVLIPAFALGRAQELCILLDDYWERMNLRVPIYF 266

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            SAGLTIQANMYYKM I W SQK+K+T    N +DFK+V   DRSL++APGPCVLFATPGM
Sbjct: 267  SAGLTIQANMYYKMLISWTSQKVKET---YNAFDFKNVHNFDRSLIDAPGPCVLFATPGM 323

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIHQ 987
            ++GGFSLEVFK WAPSE+NL+TLPGYC+AGTIG+KLMSG PT ++L+  T+IDVRCQIHQ
Sbjct: 324  LTGGFSLEVFKHWAPSEMNLITLPGYCLAGTIGNKLMSGNPT-IELE-GTKIDVRCQIHQ 381

Query: 986  LSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVLI 807
            L+FSPHTD KGIMDL+ FLSP+HV+LVHGEKPKMA+L+ERIQSEL I C  PANNE + I
Sbjct: 382  LAFSPHTDGKGIMDLVKFLSPQHVILVHGEKPKMATLKERIQSELGIKCYDPANNESMCI 441

Query: 806  PTTPSVKVGATKMFIRRCSTST---LGKTDDKLLISCSTSNEAS---------GARGILV 663
            P+T  VK GA+  FIR C       L    ++  +S S   E +          A GILV
Sbjct: 442  PSTHYVKAGASDAFIRSCMNPNFQFLKSGSEEKSVSGSKCTEGTLPLWIKDERVAEGILV 501

Query: 662  MEKTKTAKIIDEDELVHTLGLEEHKVLYALCCPVEFSTMELATNEANIISLCESSLMVVD 483
            +EK++ AK++ +DEL+  LG + H+V +A CCPV    +E  T      SL  ++ M+ D
Sbjct: 502  LEKSEKAKVVHQDELLLMLGEKRHEVQFAYCCPVNVDELEKFTT----TSLTPTARMLRD 557

Query: 482  VPTSSTTEDVNSAENRSSLHSLLV-KFRAKIDCTNIQVAPAHLQLRSFHVSVCSNEDCKY 306
                          N+SSL  LLV K   K+   NIQ    HLQ+ SFH+SVC  + C Y
Sbjct: 558  -------------PNKSSLIRLLVAKLSRKLSEGNIQDFGEHLQVESFHLSVCLKDTCPY 604

Query: 305  RMKNKNGIPKSMVYFCCRWSPVDDKFARELLQIME 201
            R+ N         + CC WS  DDK AR+++  ME
Sbjct: 605  RITNGLEDKPRTAFVCCTWSAADDKLARKIISAME 639


>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-II-like [Fragaria vesca subsp. vesca]
          Length = 1009

 Score =  700 bits (1807), Expect = 0.0
 Identities = 358/575 (62%), Positives = 423/575 (73%), Gaps = 12/575 (2%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GPIYMTYPTKALAPLMLEDYRK++V+RRGEEE FT +HI ECMKKVI +++K+T+QVDKD
Sbjct: 82   GPIYMTYPTKALAPLMLEDYRKIMVERRGEEEQFTSEHIAECMKKVIAVNLKETVQVDKD 141

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L+IRAYYAGHVLGAAM YAKVG++ ++YTGDYNMTPDRHLGAAQIDRL LDLVITESTYA
Sbjct: 142  LQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRLSLDLVITESTYA 201

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
            TTIRDSKY REREFLKAVH CVAGGGKVLIP+FALGRAQELCILL+DYWERM LKVPIYF
Sbjct: 202  TTIRDSKYPREREFLKAVHTCVAGGGKVLIPSFALGRAQELCILLEDYWERMNLKVPIYF 261

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            S  LT QANMYY M I W SQKIK+T S  N +DFK+V   +RS+++APGPCVLFA PGM
Sbjct: 262  STALTRQANMYYMMLISWTSQKIKETHSTHNAFDFKNVHKFERSMIDAPGPCVLFAGPGM 321

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIHQ 987
            ISGGFSLEVFK WAPSE NLV +PGYCVAGTIGHKLMSGKPTK+DLDK+T+IDVRCQIHQ
Sbjct: 322  ISGGFSLEVFKHWAPSEKNLVIMPGYCVAGTIGHKLMSGKPTKIDLDKDTRIDVRCQIHQ 381

Query: 986  LSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVLI 807
            L+FSPHTDAKGIMDL+ FLSPKHV+LVHGEKPKMA+L+ RI++EL I C YPA NE V I
Sbjct: 382  LAFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMATLKGRIETELGIQCYYPAINETVSI 441

Query: 806  PTTPSVKVGATKMFIRRCSTSTLGKTDDKLLISCSTSNEAS----------GARGILVME 657
            P+T       +  F++ CS+     +      S  +SN  S           A GILVME
Sbjct: 442  PSTHYATAVTSDAFVQSCSSPNFKFSTSSSEHSQGSSNSKSIPRLRVSDDRVAEGILVME 501

Query: 656  KTKTAKIIDEDELVHTLGLEEHKVLYALCCPVEFSTMELATNEANIISLCESSLMVVDVP 477
            K K AK++ +DEL   LG ++H+V +A CCP      +  T+                +P
Sbjct: 502  KNKKAKVVHQDELPLMLGEKKHQVKFAYCCPAHIGNSQENTS----------------LP 545

Query: 476  TSSTTEDVNSAENRSSLHSLLVKFRAKIDCTNIQVAPAHLQLRSFHVSVCSNEDCKYRMK 297
             SST  D+        L     K   ++   NIQ    HLQL S HVS+CSN DC YR+ 
Sbjct: 546  LSSTNNDL--------LQLFSAKLANELSEGNIQHFGDHLQLESIHVSICSNNDCPYRLS 597

Query: 296  NKNGI--PKSMVYFCCRWSPVDDKFARELLQIMEQ 198
            + NG    +  V+FCC W   D+K A +++ I ++
Sbjct: 598  D-NGAEEQREPVFFCCSWEMEDEKLAWKVISICQK 631


>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-II-like [Cucumis sativus]
          Length = 649

 Score =  698 bits (1801), Expect = 0.0
 Identities = 358/586 (61%), Positives = 434/586 (74%), Gaps = 23/586 (3%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GPIYMTYPT ALAP+ LEDYRKV+VDRRGE E FT DHIMEC+KKV+P+D+KQTIQVD+D
Sbjct: 87   GPIYMTYPTMALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDED 146

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L+IRAYYAGHVLGAAM YAKVG++ ++YTGDYNMTPDRHLGAAQIDR+QLDL+ITESTYA
Sbjct: 147  LQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYA 206

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
            TTIRDSKYAREREFLKAVH C+A GGKVLIPTFALGRAQELC+LLDDYWERM LK PIY 
Sbjct: 207  TTIRDSKYAREREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYV 266

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            SAGLT+QANMYYKM I W SQK+K+T + RN +DFK+V   DRS+++APGPCVLFATPGM
Sbjct: 267  SAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGM 326

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIHQ 987
            IS GFSLEVFK+WAPS+LNL+TLPGYCVAGT+GHKLMSGKPTK+DLDK TQIDV+CQ+HQ
Sbjct: 327  ISSGFSLEVFKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQ 386

Query: 986  LSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVLI 807
            L+FSPHTD+KGIMDL+ FLSPKHV+LVHGEKPKMA L+ERI SEL IPC  PANNE V I
Sbjct: 387  LAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSI 446

Query: 806  PTTPSVKVGATKMFIRRCST------------------STLGKTDDKLLISCSTSNEASG 681
             +T SVK  A+ MFI+ CST                  S   +    +LI    S++   
Sbjct: 447  SSTLSVKAEASSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIPLQVSDDRVN 506

Query: 680  ARGILVMEKTKTAKIIDEDELVHTLGLEEHKVLYALCCPVEFSTMELATNEANII-SLCE 504
              GILVME  K  K + +DEL+  LG +EH+V +A C P+ F +++    E +++ SL  
Sbjct: 507  -EGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFGSLD----EIHVMDSLSR 561

Query: 503  SSLMVVDVPTSSTTEDVNSAENRSSLHSLLVKFRAKIDCTNIQVAPAHLQLRSFHVSVCS 324
             SL                      L  L  K   ++   N+Q    +LQ+ S  +S+CS
Sbjct: 562  KSLW---------------------LSQLSFKLSTELSDRNVQNLGEYLQVESITLSICS 600

Query: 323  NEDCKY----RMKNKNGIPKSMVYFCCRWSPVDDKFARELLQIMEQ 198
             E+C Y    R+KN++    +MV+ CC W   D+  A +++ I+E+
Sbjct: 601  KENCPYRTIDRIKNES---TAMVFCCCSWLVADEILAWKIISILEK 643


>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223534732|gb|EEF36424.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 963

 Score =  696 bits (1797), Expect = 0.0
 Identities = 350/519 (67%), Positives = 416/519 (80%), Gaps = 12/519 (2%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GP+YMTYPTKAL+PLMLEDYRKV+VDRRGEEE FT DHI +C+ KVI +D+KQT+QVDKD
Sbjct: 87   GPVYMTYPTKALSPLMLEDYRKVMVDRRGEEEQFTADHIKQCLNKVIAVDLKQTVQVDKD 146

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L+IRAYYAGHVLGAAM YAKVG+S ++YTGDYNMTPDRHLGAAQIDRLQLDL+ITESTYA
Sbjct: 147  LQIRAYYAGHVLGAAMFYAKVGDSAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYA 206

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
            TTIRDSKYAREREFLK VHKCVAGGGKVLIPTFALGRAQELC+LLDDYWERM LKVPIYF
Sbjct: 207  TTIRDSKYAREREFLKVVHKCVAGGGKVLIPTFALGRAQELCLLLDDYWERMNLKVPIYF 266

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            SAGLTIQANMYYKM IGW SQKIK+T + RN +DFK+V   DRSL++APGPCVLFATPGM
Sbjct: 267  SAGLTIQANMYYKMLIGWTSQKIKETYTSRNAFDFKNVYTFDRSLLDAPGPCVLFATPGM 326

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIHQ 987
            ISGGFSLEVFK+WAP E+NLVTLPGYCVAGTIGHKLMSGKP+K++LDK+TQIDVRCQIHQ
Sbjct: 327  ISGGFSLEVFKRWAPCEMNLVTLPGYCVAGTIGHKLMSGKPSKINLDKDTQIDVRCQIHQ 386

Query: 986  LSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVLI 807
            LSFSPHTDAKGIMDL+ FLSPKHV+LVHGEKPKMASL+ERIQSEL I C  PAN E + I
Sbjct: 387  LSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMASLKERIQSELEIQCYVPANCETLCI 446

Query: 806  PTTPSVKVGATKMFIRRCST-------STLGKTDDKLLISCSTS-----NEASGARGILV 663
            P+T  VK  A++ FIR C +        +L  T D +L S + +     ++   A GILV
Sbjct: 447  PSTLFVKADASEAFIRSCLSPNFRFLNKSLKDTSDLVLHSTNATSRLEVSDERVAEGILV 506

Query: 662  MEKTKTAKIIDEDELVHTLGLEEHKVLYALCCPVEFSTMELATNEANIISLCESSLMVVD 483
            +EK K A+++ +DEL+  LG ++H+V +A CCPV+   M+    +    S     L+ ++
Sbjct: 507  VEKNKKARVVHQDELLLMLGAKQHEVQFAYCCPVQVDNMDQTRRDP---SSTHDELLTLE 563

Query: 482  VPTSSTTEDVNSAENRSSLHSLLVKFRAKIDCTNIQVAP 366
              T  +  D+N       L  L +K + K +  +++++P
Sbjct: 564  NETGKSAIDLNLL-----LSFLSLKKKKKTNSISLRLSP 597


>ref|XP_006661200.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-II-like [Oryza brachyantha]
          Length = 545

 Score =  682 bits (1761), Expect = 0.0
 Identities = 332/439 (75%), Positives = 378/439 (86%), Gaps = 5/439 (1%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GP+YMTYPTKALAPLMLEDYRKV+VD RGEEE ++Y+ I+ CMKKVIPLD+KQTIQVDKD
Sbjct: 89   GPVYMTYPTKALAPLMLEDYRKVMVDHRGEEEQYSYEDILRCMKKVIPLDLKQTIQVDKD 148

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L I AYYAGHVLGAAMIYAKVG++ ++YTGDYNMTPDRHLGAAQIDRL+LDL+ITESTYA
Sbjct: 149  LLICAYYAGHVLGAAMIYAKVGDAAVVYTGDYNMTPDRHLGAAQIDRLKLDLLITESTYA 208

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
             T+RDSK+AREREFLKAVHKCV+GGGKVLIP FALGRAQELCILLDDYWERM LK+PIYF
Sbjct: 209  KTVRDSKHAREREFLKAVHKCVSGGGKVLIPAFALGRAQELCILLDDYWERMNLKIPIYF 268

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            SAGLT+QANMYYKM IGW SQKIK++ +V N +DFKHVC  +RS +N PGPCVLFATPGM
Sbjct: 269  SAGLTVQANMYYKMLIGWTSQKIKNSYTVHNPFDFKHVCHFERSFINNPGPCVLFATPGM 328

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIHQ 987
            ISGGFSLEVFK+WAPSE NLVTLPGYCVAGTIGHKLMSGKPTKVD+DK+T IDVRCQIHQ
Sbjct: 329  ISGGFSLEVFKKWAPSEKNLVTLPGYCVAGTIGHKLMSGKPTKVDIDKDTHIDVRCQIHQ 388

Query: 986  LSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVLI 807
            LSFSPHTD+KGIMDL  FLSP HV+LVHGEKP+MA L+ERI+SEL I CCYPANNE V I
Sbjct: 389  LSFSPHTDSKGIMDLTEFLSPNHVILVHGEKPQMAFLKERIESELGIQCCYPANNESVTI 448

Query: 806  PTTPSVKVGATKMFIRRCSTS-TLGKTDDKLLISCSTSNEASG----ARGILVMEKTKTA 642
            PTT ++K+ AT+ FI  C    T     ++ L+  S   E       A GIL+MEK+K  
Sbjct: 449  PTTQNLKINATEKFITSCCVDRTENNPQNRSLVFGSDMPEGCNTEGVAEGILLMEKSKAP 508

Query: 641  KIIDEDELVHTLGLEEHKV 585
            KI+ EDEL+H+LG+E+H V
Sbjct: 509  KILCEDELLHSLGMEKHYV 527


>ref|NP_001063107.1| Os09g0397900 [Oryza sativa Japonica Group]
            gi|50252615|dbj|BAD28786.1| putative FEG protein [Oryza
            sativa Japonica Group] gi|113631340|dbj|BAF25021.1|
            Os09g0397900 [Oryza sativa Japonica Group]
            gi|218202115|gb|EEC84542.1| hypothetical protein
            OsI_31281 [Oryza sativa Indica Group]
            gi|222641522|gb|EEE69654.1| hypothetical protein
            OsJ_29268 [Oryza sativa Japonica Group]
          Length = 559

 Score =  676 bits (1744), Expect = 0.0
 Identities = 333/457 (72%), Positives = 385/457 (84%), Gaps = 8/457 (1%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GP+YMTYPTKALAPLMLEDYRKV+VD RGEEE ++Y+ I+ CM+KVIPLD+KQTIQVDKD
Sbjct: 90   GPVYMTYPTKALAPLMLEDYRKVMVDHRGEEEQYSYEDILRCMRKVIPLDLKQTIQVDKD 149

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L IRAYYAGHVLGAAMIYAKVG++ I+YTGDYNMTPDRHLGAAQIDRL+LDL+ITESTYA
Sbjct: 150  LSIRAYYAGHVLGAAMIYAKVGDAAIVYTGDYNMTPDRHLGAAQIDRLKLDLLITESTYA 209

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
             T+RDSK+AREREFLKAVHKCV+GGGKVLIP FALGRAQELCILLDDYWERM LK+PIYF
Sbjct: 210  KTVRDSKHAREREFLKAVHKCVSGGGKVLIPAFALGRAQELCILLDDYWERMNLKIPIYF 269

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            SAGLTIQANMYYKM IGW SQKIK++ +V N +DFKHVC  +RS +N PGPCVLFATPGM
Sbjct: 270  SAGLTIQANMYYKMLIGWTSQKIKNSYTVHNPFDFKHVCHFERSFINNPGPCVLFATPGM 329

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIHQ 987
            ISGGFSLEVFK+WAPSE NLVTLPGYCVAGTIGHKLMSGKPT++D+DK+T IDVRCQIHQ
Sbjct: 330  ISGGFSLEVFKKWAPSEKNLVTLPGYCVAGTIGHKLMSGKPTRIDIDKDTHIDVRCQIHQ 389

Query: 986  LSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVLI 807
            LSFSPHTD+KGIMDL  FLSP HV+LVHGEKP+MA L+ERI+SEL + CCYPANNE V I
Sbjct: 390  LSFSPHTDSKGIMDLTEFLSPSHVILVHGEKPQMAFLKERIESELGMQCCYPANNETVSI 449

Query: 806  PTTPSVKVGATKMFI-RRCSTSTLGKTDDKLL-------ISCSTSNEASGARGILVMEKT 651
            PT+ ++K+ AT+ FI   C   T      + L         C T      A G+L+MEK+
Sbjct: 450  PTSQNLKINATEKFIVSFCMDETENDPQKQNLNFGGDMPQGCRTEGV---AEGVLLMEKS 506

Query: 650  KTAKIIDEDELVHTLGLEEHKVLYALCCPVEFSTMEL 540
            KT KI+ EDEL+H+LG+E H V +    P+  S++E+
Sbjct: 507  KTPKILREDELLHSLGMETHFVHFE---PLHPSSIEV 540


>gb|AAS80153.1| ACT11D09.9 [Cucumis melo]
          Length = 708

 Score =  676 bits (1743), Expect = 0.0
 Identities = 356/613 (58%), Positives = 430/613 (70%), Gaps = 50/613 (8%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GPIYMTYPT ALAP+ LEDYRKV+VDRRGE E FT DHIMEC+KKV+P+D+KQTIQVD+D
Sbjct: 119  GPIYMTYPTMALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDED 178

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L+IRAYYAGHVLGAAM YAKVG++ ++YTGDYNMTPDRHLGAAQIDR+QLDL+ITESTYA
Sbjct: 179  LQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYA 238

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRA-QELCILLDDYWERMKLKVPIY 1350
            TTIRDSKYAREREFLKAVH C+A GGKVLIPTFALGRA QELC+LLDDYWERM LK PIY
Sbjct: 239  TTIRDSKYAREREFLKAVHNCLASGGKVLIPTFALGRAQQELCVLLDDYWERMNLKFPIY 298

Query: 1349 FSAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPG 1170
             SAGLT+QANMYYKM I W SQK+K+T + RN +DFK+V   DRS+++APGPCVLFATPG
Sbjct: 299  VSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPG 358

Query: 1169 MISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIH 990
            MIS GFSLEVFK+WAPS+LNL+TLPGYCVAGT+GHKLMSGKPTK+DLDK+TQIDV    H
Sbjct: 359  MISSGFSLEVFKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKDTQIDV----H 414

Query: 989  QLSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVL 810
            QL+FSPHTD+KGIMDL+ FLSPKHV+LVHGEKPKMA L+ERI SEL IPC  PANNE V 
Sbjct: 415  QLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVS 474

Query: 809  IPTTPSVKVGATKMFIRRCSTSTLG----------------------KTDDKLLISCST- 699
            I +T S+K  A+ MFI+ CST                          +T + L+  CS  
Sbjct: 475  ISSTLSIKAEASSMFIQSCSTPNFKFLKRNLIDKIDPDLKDLSYKAVRTSNMLIRECSNP 534

Query: 698  -------------SNEASGA-----------RGILVMEKTKTAKIIDEDELVHTLGLEEH 591
                          +  SG             GILVME  K  K + +DEL+  LG +EH
Sbjct: 535  HFKHLNRNLDAKFDSSLSGGPELQVSDDRVNEGILVMENGKKTKALHQDELLLLLGEQEH 594

Query: 590  KVLYALCCPVEFSTMELATNEANII-SLCESSLMVVDVPTSSTTEDVNSAENRSSLHSLL 414
            +V +A C P+ F +++    E +++ SL   SL                      L  L 
Sbjct: 595  EVRFAHCRPIYFGSLD----EIHVMDSLSRKSLW---------------------LSQLS 629

Query: 413  VKFRAKIDCTNIQVAPAHLQLRSFHVSVCSNEDCKYRMKNK-NGIPKSMVYFCCRWSPVD 237
             K   ++   N+Q    +LQ+ S  +S+CS E+C YR  N+      +MV+ CC W   D
Sbjct: 630  FKLSTELSDRNVQNLGEYLQVESITLSICSKENCPYRTTNRIENESTAMVFCCCSWLVAD 689

Query: 236  DKFARELLQIMEQ 198
            +  A +++ I+E+
Sbjct: 690  EILAWKIISILEK 702


>ref|XP_004956755.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-II-like [Setaria italica]
          Length = 561

 Score =  667 bits (1722), Expect = 0.0
 Identities = 326/443 (73%), Positives = 377/443 (85%), Gaps = 7/443 (1%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GPIYMTYPTKALAP MLEDYRKV +D+RGE E ++Y+ I+ CMKKVIPLD+KQT+QVDKD
Sbjct: 90   GPIYMTYPTKALAPFMLEDYRKVTMDQRGEAEQYSYEDILRCMKKVIPLDLKQTVQVDKD 149

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L IRAYYAGHVLGAAMIYAK G++ ++YTGDYNMTPDRHLGAAQIDRL+LDL+ITESTYA
Sbjct: 150  LVIRAYYAGHVLGAAMIYAKAGDAAMVYTGDYNMTPDRHLGAAQIDRLKLDLLITESTYA 209

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
             TIRDSK+AREREFLKAVHKCV+GGGKVLIPTFALGRAQELC+LLDDYWERM LK+PIYF
Sbjct: 210  KTIRDSKHAREREFLKAVHKCVSGGGKVLIPTFALGRAQELCMLLDDYWERMNLKIPIYF 269

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            SAGLTIQANMYYKM IGW SQKIKD+ +V N++DFKHVC  +RS +N PGPCVLFATPGM
Sbjct: 270  SAGLTIQANMYYKMLIGWTSQKIKDSHAVHNSFDFKHVCHFERSFINNPGPCVLFATPGM 329

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIHQ 987
            ISGGFSLE FK+WAPSE NL+TLPGYCVAGT+GHKLMSGK TK+ LDK+T IDVRCQIHQ
Sbjct: 330  ISGGFSLEAFKKWAPSEKNLITLPGYCVAGTVGHKLMSGKTTKIVLDKDTHIDVRCQIHQ 389

Query: 986  LSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVLI 807
            L+FSPHTD+KGIMDL  FLSPKHV+LVHGEKP+MA L+ERI+SEL +PC YPANNE V I
Sbjct: 390  LAFSPHTDSKGIMDLTEFLSPKHVILVHGEKPQMAFLKERIESELGMPCFYPANNESVSI 449

Query: 806  PTTPSVKVGATKMFIRRCSTSTLGKTD--DKLLISCSTSNEASG-----ARGILVMEKTK 648
            PTT ++K+  T+ FI  C+    GK     + LI  + ++E +G     A G+LVMEK K
Sbjct: 450  PTTHTLKMSTTERFITSCAAEQ-GKQSLRKRNLIHGTGASEVNGSDEAAAEGVLVMEKHK 508

Query: 647  TAKIIDEDELVHTLGLEEHKVLY 579
              KI+ EDEL+  LG+E H V +
Sbjct: 509  APKILCEDELLQVLGMERHLVQF 531


>ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-II-like [Brachypodium distachyon]
          Length = 553

 Score =  667 bits (1720), Expect = 0.0
 Identities = 327/455 (71%), Positives = 381/455 (83%), Gaps = 5/455 (1%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GPIYMTYPTKALAPLMLEDYRKV+VD+RGEEE ++Y+ I+ CMKKVIP+D+KQTIQV++D
Sbjct: 91   GPIYMTYPTKALAPLMLEDYRKVMVDQRGEEEQYSYEDILRCMKKVIPVDLKQTIQVNRD 150

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L IRAYYAGHVLGAAM+YAKVG++ ++YTGDYNMTPDRHLGAAQI+RL+LDL+ITESTYA
Sbjct: 151  LVIRAYYAGHVLGAAMVYAKVGDAAMVYTGDYNMTPDRHLGAAQIERLKLDLLITESTYA 210

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
             TIRDSK+AREREFLKAVHKCV+ GGKVLIPTFALGRAQELCILLDDYWERM LK+PIYF
Sbjct: 211  KTIRDSKHAREREFLKAVHKCVSEGGKVLIPTFALGRAQELCILLDDYWERMNLKIPIYF 270

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            SAGLTIQANMYYKM IGW SQKIKD+ +V+N +DFKHVC  +RS +N PGPCVLFATPGM
Sbjct: 271  SAGLTIQANMYYKMLIGWTSQKIKDSYTVQNPFDFKHVCHFERSFINDPGPCVLFATPGM 330

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIHQ 987
            ISGGFSLEVFK+WA S+ NLVTLPGYCVAGTIGHKLMSGKPT++D+DK+T +DVRCQIHQ
Sbjct: 331  ISGGFSLEVFKRWATSDKNLVTLPGYCVAGTIGHKLMSGKPTRIDIDKDTHVDVRCQIHQ 390

Query: 986  LSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVLI 807
            LSFSPHTD+KGIMDL  FLSP HV+LVHGEKP+MA L++RI+SEL + C YPANNE V I
Sbjct: 391  LSFSPHTDSKGIMDLTEFLSPNHVILVHGEKPQMAFLKDRIESELGMSCYYPANNETVSI 450

Query: 806  PTTPSVKVGATKMFIRRCST----STLGKTDDKLLISCSTSNEASG-ARGILVMEKTKTA 642
            PTT ++K+ AT+ FI  C+      +L K+D    I  S  NE    A GIL+MEK+K  
Sbjct: 451  PTTQNMKISATEKFITNCAALQARDSLQKSDLISSIHLSGVNEDERLAEGILLMEKSKAP 510

Query: 641  KIIDEDELVHTLGLEEHKVLYALCCPVEFSTMELA 537
            KI+ EDE +  LG + H V +    P      E A
Sbjct: 511  KILCEDEFLKLLGTDRHSVQFEPLLPSRIEEAEAA 545


>ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-II-like [Solanum lycopersicum]
          Length = 1043

 Score =  662 bits (1708), Expect = 0.0
 Identities = 342/567 (60%), Positives = 413/567 (72%), Gaps = 13/567 (2%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GPIYMTYPTKALAPLMLEDYR+V+VDRRGE+E F+ ++I +CMKKV  +D+KQT+ VD+D
Sbjct: 87   GPIYMTYPTKALAPLMLEDYRRVLVDRRGEKEQFSSENIADCMKKVTAVDLKQTMLVDRD 146

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L+IRAYYAGHVLGAAM YAKVG++ ++YTGDYNMT DRHLGAAQIDRLQLDLVITESTYA
Sbjct: 147  LQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTADRHLGAAQIDRLQLDLVITESTYA 206

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
            TTIRDSKY REREFL+A+HKCV  GGKVLIP FALGRAQELC+LLDDYWERM LKVPIYF
Sbjct: 207  TTIRDSKYVREREFLEAIHKCVDSGGKVLIPAFALGRAQELCMLLDDYWERMNLKVPIYF 266

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            SAGLTIQANMYYK+ I WASQK+K+ S+ RN +DFK+V   +RS++NAPGPCVLFATPGM
Sbjct: 267  SAGLTIQANMYYKVLINWASQKVKNLSATRNAFDFKNVHSFERSMINAPGPCVLFATPGM 326

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGK-PTKVDLDKETQIDVRCQIH 990
            +SGGFSLEVFKQWAP E NL+ LPGYC+A T+GHKLM  K P ++D+DK TQIDVRCQIH
Sbjct: 327  LSGGFSLEVFKQWAPCEQNLIVLPGYCLAETVGHKLMRAKPPARIDVDKSTQIDVRCQIH 386

Query: 989  QLSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVL 810
            QLSFSPHTD+KGIMDLI FLSPK+V+LVHGEKPKMASL+ERI+S+LRIPC YPANNE   
Sbjct: 387  QLSFSPHTDSKGIMDLIRFLSPKNVILVHGEKPKMASLKERIESDLRIPCYYPANNESQR 446

Query: 809  IPTTPSVKVGATKMFIRRCST------STLGKTDDKLLI-----SCSTSNEASGARGILV 663
            I TT  +K  A+K F++   +       T+ + D   ++     SC    +   A G ++
Sbjct: 447  IETTHYIKAEASKSFLQSSLSPNFKFLKTISRADTGFVLNERAESCVQVCDDRVAEGAVI 506

Query: 662  MEKTKTAKIIDEDELVHTLGLEEHKVLYALCCPVEFSTMELATNEANIISLCESSLMVVD 483
            M+K +  KI+ ++EL+  L  E HKV  A CCPV         +E   ++L         
Sbjct: 507  MQKDQHPKIVHQNELMDILEAENHKVQVAYCCPV------CVPDEPKNVAL--------- 551

Query: 482  VPTSSTTEDVNSAENRSS-LHSLLVKFRAKIDCTNIQVAPAHLQLRSFHVSVCSNEDCKY 306
                S  ED++   ++ S LH L  K         I      LQ++SF VS C  E C +
Sbjct: 552  ----SPGEDMHPVLDKCSLLHLLYTKLSNGFQDVTILNDGDRLQIQSFTVSPCLKEKCPH 607

Query: 305  RMKNKNGIPKSMVYFCCRWSPVDDKFA 225
            R+          V FCC WS  D+K A
Sbjct: 608  RIHVNPDSTSEAVNFCCTWSMEDEKLA 634


>ref|XP_002455960.1| hypothetical protein SORBIDRAFT_03g028040 [Sorghum bicolor]
            gi|241927935|gb|EES01080.1| hypothetical protein
            SORBIDRAFT_03g028040 [Sorghum bicolor]
          Length = 558

 Score =  661 bits (1705), Expect = 0.0
 Identities = 320/442 (72%), Positives = 374/442 (84%), Gaps = 6/442 (1%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GPIYMTYPTKALAP MLEDYRKV +D+RGEEE ++Y+ I+ CMKKVIP+D+KQTIQVDKD
Sbjct: 90   GPIYMTYPTKALAPFMLEDYRKVTMDQRGEEEQYSYEDILRCMKKVIPMDLKQTIQVDKD 149

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L IRAYYAGHV+GAAMIYAKVG++ ++YTGDYNMTPDRHLGAAQID L+LDL+ITESTYA
Sbjct: 150  LVIRAYYAGHVIGAAMIYAKVGDAAMVYTGDYNMTPDRHLGAAQIDHLKLDLLITESTYA 209

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
             TIRDSK+AREREFLKAVHKCV+GGGKVLIPTFALGRAQELC+LLDDYWERM LKVPIYF
Sbjct: 210  KTIRDSKHAREREFLKAVHKCVSGGGKVLIPTFALGRAQELCMLLDDYWERMDLKVPIYF 269

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            SAGLTIQAN+YYKM IGW SQKIKD+ +V N +DFKHVC  +RS +N PGPCVLFATPGM
Sbjct: 270  SAGLTIQANVYYKMLIGWTSQKIKDSHAVHNPFDFKHVCHFERSFINNPGPCVLFATPGM 329

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIHQ 987
            ISGGFSLE FK+WAPSE NL+TLPGYCV+GTIGHKLM GKPT++D  K+  IDVRCQIHQ
Sbjct: 330  ISGGFSLEAFKKWAPSEKNLITLPGYCVSGTIGHKLMCGKPTRIDY-KDIHIDVRCQIHQ 388

Query: 986  LSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVLI 807
            L+FSPHTD+KGIMDL  FLSPKHV+LVHGEKP+MA L+ERI+SEL +PC YP NNE V I
Sbjct: 389  LAFSPHTDSKGIMDLTEFLSPKHVILVHGEKPQMAFLKERIESELGMPCYYPGNNESVSI 448

Query: 806  PTTPSVKVGATKMFIRRCSTSTLGKTDDKLLISCST------SNEASGARGILVMEKTKT 645
            PTT ++K+ AT+ FI  C+     ++  K  + C T       ++   A GIL+MEK K+
Sbjct: 449  PTTQNLKMSATERFITSCAVEQGKRSLHKRNLICGTGLSEVIGSDEEAAEGILLMEKHKS 508

Query: 644  AKIIDEDELVHTLGLEEHKVLY 579
             KI+ EDEL+  LG+E+H V +
Sbjct: 509  PKILCEDELLEVLGMEQHLVQF 530


>ref|XP_004498247.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 3-II-like [Cicer arietinum]
          Length = 532

 Score =  658 bits (1697), Expect = 0.0
 Identities = 328/448 (73%), Positives = 370/448 (82%), Gaps = 13/448 (2%)
 Frame = -1

Query: 1889 RGPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDK 1710
            RGP+YMTYPTKAL+PLMLEDYRKV+VDRRGEEE FT DHI ECMKKVI +D++QT+QVD+
Sbjct: 86   RGPVYMTYPTKALSPLMLEDYRKVMVDRRGEEEQFTSDHIAECMKKVIAVDLRQTVQVDE 145

Query: 1709 DLEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTY 1530
            DL+IRAYYAGHV+GAAM Y KVG++ ++YTGDYNMTPDRHLGAAQIDRL+LDL+ITESTY
Sbjct: 146  DLQIRAYYAGHVIGAAMFYVKVGDAEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTY 205

Query: 1529 ATTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIY 1350
            ATTIRDSKYAREREFLKAVHKCV+GGGKVLIPTFALGRAQELCILLDDYWERM LKVPIY
Sbjct: 206  ATTIRDSKYAREREFLKAVHKCVSGGGKVLIPTFALGRAQELCILLDDYWERMNLKVPIY 265

Query: 1349 FSAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPG 1170
            FSAGLTIQANMYYKM IGW SQKIKDT S  N +DFK+V   +RS+++A GPCVLFATPG
Sbjct: 266  FSAGLTIQANMYYKMLIGWTSQKIKDTYSTHNAFDFKNVHKFERSMIDATGPCVLFATPG 325

Query: 1169 MISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIH 990
            MISGGFSLEVFK WAPSE NLVTLPGYCVAGT+GHKL SGKPTK++ D +TQIDVRCQIH
Sbjct: 326  MISGGFSLEVFKHWAPSENNLVTLPGYCVAGTVGHKLTSGKPTKINTDPDTQIDVRCQIH 385

Query: 989  QLSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVL 810
            QL+FSPHTD+KGIMDL+ FLSPKHV+LVHGEKPKMASL+ERI SEL I C  PANNE V 
Sbjct: 386  QLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMASLKERIHSELGIQCYNPANNETVC 445

Query: 809  IPTTPSVKVGATKMFIRRC-------------STSTLGKTDDKLLISCSTSNEASGARGI 669
            IP+T  V   A+  FIR C              TS     D  L       +E   A G+
Sbjct: 446  IPSTQYVNAEASGTFIRNCLNPNFQFQKCSSEDTSNSTMIDKNLTPKLQVEDERV-ADGV 504

Query: 668  LVMEKTKTAKIIDEDELVHTLGLEEHKV 585
            LVMEK+K AKI++ DEL+  L  ++ KV
Sbjct: 505  LVMEKSKKAKIVNRDELLLMLDEKKRKV 532


>tpg|DAA58566.1| TPA: putative RNA-metabolising metallo-beta-lactamase [Zea mays]
          Length = 558

 Score =  640 bits (1652), Expect = 0.0
 Identities = 314/443 (70%), Positives = 373/443 (84%), Gaps = 7/443 (1%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GPIYMTYPTKALAP MLEDYRKV + +RGEE+ ++Y+ I+ CMKKV P+D+KQT+QVDKD
Sbjct: 90   GPIYMTYPTKALAPFMLEDYRKVTMGQRGEEKQYSYEDILRCMKKVTPMDLKQTVQVDKD 149

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L IRAYYAGHV+GAAMIYAKVG++ ++YTGDYNMTPDRHLGAAQIDRL+LD++ITESTYA
Sbjct: 150  LVIRAYYAGHVIGAAMIYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRLKLDVLITESTYA 209

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
             +IRDSK AREREFLKAVHKCV+GGGKVLIPTFALGRAQELC+LLDDYWERM LKVPIYF
Sbjct: 210  KSIRDSKPAREREFLKAVHKCVSGGGKVLIPTFALGRAQELCMLLDDYWERMGLKVPIYF 269

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            SAGLTIQAN+YYKM IGW SQKIKD+ +V N +DFKHVC  +RS +N PGPCVLFATPGM
Sbjct: 270  SAGLTIQANVYYKMLIGWTSQKIKDSHTVHNPFDFKHVCHFERSFINNPGPCVLFATPGM 329

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIHQ 987
            I+GGFSLE FK+WAPSE NLVTLPGYCV+GTIGHKLM GKPT+VD + +T IDVRCQIHQ
Sbjct: 330  ITGGFSLEAFKKWAPSEKNLVTLPGYCVSGTIGHKLMCGKPTRVDYE-DTHIDVRCQIHQ 388

Query: 986  LSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVLI 807
            L+FSPHTD+KGIMDL  FLSPK+V+LVHGEKP+MA L+ERI+SEL +PC YP NNE V I
Sbjct: 389  LAFSPHTDSKGIMDLTEFLSPKNVILVHGEKPQMAFLKERIESELGMPCYYPGNNESVSI 448

Query: 806  PTTPSVKVGATKMFIRRCSTSTLGKTDDKLLISCST-------SNEASGARGILVMEKTK 648
            PTT ++K+ AT+ FI  C+     ++  K  +   T       S+EA+G  G+L+M+K K
Sbjct: 449  PTTQNLKMSATERFITGCAVEQGKRSLHKRNLIYGTGLSEEIGSDEAAG-EGVLLMQKHK 507

Query: 647  TAKIIDEDELVHTLGLEEHKVLY 579
            + KI+ EDEL+  LG+  H V +
Sbjct: 508  SPKILCEDELLEVLGMGRHLVQF 530


>ref|XP_006395858.1| hypothetical protein EUTSA_v10005303mg [Eutrema salsugineum]
            gi|557092497|gb|ESQ33144.1| hypothetical protein
            EUTSA_v10005303mg [Eutrema salsugineum]
          Length = 617

 Score =  640 bits (1650), Expect = 0.0
 Identities = 324/563 (57%), Positives = 406/563 (72%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GP+YM+YPTKAL+PLMLEDYR+V+VDRRGEEELFT  HI  CM+KVI LD+KQTIQVD+D
Sbjct: 87   GPVYMSYPTKALSPLMLEDYRRVMVDRRGEEELFTTAHIANCMEKVIALDLKQTIQVDQD 146

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L+IRAYYAGHVLGA M+YAKVG++ I+YTGDYNMT DRHLGAA+IDRLQLDL+I+ESTYA
Sbjct: 147  LQIRAYYAGHVLGAVMVYAKVGDAAIVYTGDYNMTTDRHLGAAKIDRLQLDLLISESTYA 206

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
            TTIR SKY REREFL+AVHKCVAGGGK LIP+FALGRAQELC+LLDDYWERM +KVPIYF
Sbjct: 207  TTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQELCMLLDDYWERMNIKVPIYF 266

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            S+GLTIQANMYYKM I W SQ +K+  +  N +DFK+V   DRSL++APGPCVLFATPGM
Sbjct: 267  SSGLTIQANMYYKMLISWTSQNVKEKHATHNPFDFKNVKDFDRSLIHAPGPCVLFATPGM 326

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIHQ 987
            +  GFSLEVFK WAPS LNLV LPGY VAGT+GHKLMSGKPT VDL   T++DVRC+IHQ
Sbjct: 327  LCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHKLMSGKPTTVDLYNGTKVDVRCKIHQ 386

Query: 986  LSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVLI 807
            ++FSPHTDAKGIMDL  FLSPK+V+LVHGEKP M SL+++I SEL +PC  PAN E V +
Sbjct: 387  VAFSPHTDAKGIMDLTKFLSPKNVVLVHGEKPSMMSLKDKITSELDVPCFVPANGETVSV 446

Query: 806  PTTPSVKVGATKMFIRRCSTSTLGKTDDKLLISCSTSNEASGARGILVMEKTKTAKIIDE 627
             +T  +K  A+ MF++ CS+     ++    +  +    A    G+LV+EK+K AKI+  
Sbjct: 447  SSTTFIKANASDMFLKSCSSPNFRFSNSSTELRVTDQRTAD---GVLVIEKSKKAKIVHL 503

Query: 626  DELVHTLGLEEHKVLYALCCPVEFSTMELATNEANIISLCESSLMVVDVPTSSTTEDVNS 447
            DE+   L  + H V  A CCPV+                 ES  + VD+     +E ++ 
Sbjct: 504  DEVSEVLHEKNHVVSLACCCPVKVKK--------------ESDDVDVDLIIKQLSEKISE 549

Query: 446  AENRSSLHSLLVKFRAKIDCTNIQVAPAHLQLRSFHVSVCSNEDCKYRMKNKNGIPKSMV 267
              + + +H          +C         LQ+ SF  S+C  E C +R +  +   ++ V
Sbjct: 550  KVSGAEIHE-------TGNC---------LQVGSFKGSLCLKEKCAHRREISSSSSEA-V 592

Query: 266  YFCCRWSPVDDKFARELLQIMEQ 198
            + CC WS  D +   E++ +++Q
Sbjct: 593  FLCCNWSVSDLELGWEIINVIKQ 615


>ref|XP_006290841.1| hypothetical protein CARUB_v10016952mg [Capsella rubella]
            gi|482559548|gb|EOA23739.1| hypothetical protein
            CARUB_v10016952mg [Capsella rubella]
          Length = 555

 Score =  637 bits (1644), Expect = e-180
 Identities = 325/562 (57%), Positives = 403/562 (71%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GPIYM+YPTKAL+PLMLEDYR+V+VDRRGEEELFT  HI  CMKKVI +D+KQTIQVD+D
Sbjct: 29   GPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELFTTTHIANCMKKVIAIDLKQTIQVDED 88

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L+IRAYYAGHVLGA M+YAKVG++ I+YTGDYNMT DRHLGAA+IDRLQLDL+I+ESTYA
Sbjct: 89   LQIRAYYAGHVLGAVMVYAKVGDAAIVYTGDYNMTTDRHLGAAKIDRLQLDLLISESTYA 148

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
            TTIR SKY REREFL+AVHKCVAGGGK LIP+FALGRAQELC+LLDDYWERM +KVPIYF
Sbjct: 149  TTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQELCMLLDDYWERMNIKVPIYF 208

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            S+GLTIQANMYYKM I W SQ +K+  +  N +DFK+V   DRSL++APGPCVLFATPGM
Sbjct: 209  SSGLTIQANMYYKMLISWTSQNVKEKHNTHNPFDFKNVKDFDRSLIHAPGPCVLFATPGM 268

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGKPTKVDLDKETQIDVRCQIHQ 987
            +  GFSLEVFK WAPS LNLV LPGY VAGT+GHKLM+GKPT VDL   T++DVRC+IHQ
Sbjct: 269  LCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHKLMAGKPTTVDLYNGTKVDVRCKIHQ 328

Query: 986  LSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVLI 807
            ++FSPHTDAKGIMDL  FLSPK+V+LVHGEKP M +L+E+I SEL IPC  PAN E V +
Sbjct: 329  VAFSPHTDAKGIMDLTKFLSPKNVVLVHGEKPSMMTLKEKITSELDIPCFVPANGETVSV 388

Query: 806  PTTPSVKVGATKMFIRRCSTSTLGKTDDKLLISCSTSNEASGARGILVMEKTKTAKIIDE 627
             +T  VK  A+ MF++ CS+     ++   L       +   A G+LV+EK+K AKI+ +
Sbjct: 389  ASTTFVKAKASDMFLKSCSSPNFKFSNSSQL----RVTDQRTADGVLVIEKSKKAKIVHQ 444

Query: 626  DELVHTLGLEEHKVLYALCCPVEFSTMELATNEANIISLCESSLMVVDVPTSSTTEDVNS 447
            DE+   L  + H V  A CCPV+      + N+ ++I    + +  +      +   ++ 
Sbjct: 445  DEVSEVLHEKNHVVCLAYCCPVKAKGE--SDNDVDLIKQLSTKISEI-----MSGAQIHE 497

Query: 446  AENRSSLHSLLVKFRAKIDCTNIQVAPAHLQLRSFHVSVCSNEDCKYRMKNKNGIPKSMV 267
            AEN                          LQ+ SF  +VC  E C +R +  +      V
Sbjct: 498  AENS-------------------------LQVGSFKGAVCLKEKCMHRTEIISC--SEAV 530

Query: 266  YFCCRWSPVDDKFARELLQIME 201
            + CC WS  D +   E++ +M+
Sbjct: 531  FLCCNWSVADLELGWEIINVMK 552


>ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 3-II-like [Solanum tuberosum]
          Length = 948

 Score =  635 bits (1639), Expect = e-179
 Identities = 311/454 (68%), Positives = 371/454 (81%), Gaps = 12/454 (2%)
 Frame = -1

Query: 1886 GPIYMTYPTKALAPLMLEDYRKVIVDRRGEEELFTYDHIMECMKKVIPLDIKQTIQVDKD 1707
            GPIYMTYPTKALAPLMLEDYR+V+VDRRGE+E F+ ++I +CMKKV  +D+KQT+ VD+D
Sbjct: 87   GPIYMTYPTKALAPLMLEDYRRVLVDRRGEKEQFSSENITDCMKKVTAVDLKQTVLVDRD 146

Query: 1706 LEIRAYYAGHVLGAAMIYAKVGESTILYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYA 1527
            L+IRAYYAGHVLGAAM YAKVG++ ++YTGDYNMT DRHLGAAQIDRLQLDLVITESTYA
Sbjct: 147  LQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTADRHLGAAQIDRLQLDLVITESTYA 206

Query: 1526 TTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFALGRAQELCILLDDYWERMKLKVPIYF 1347
            TTIRDSKY REREFL+A+HKCV  GGKVLIP FALGRAQELC+LLDDYWERM LKVPIYF
Sbjct: 207  TTIRDSKYVREREFLEAIHKCVDSGGKVLIPAFALGRAQELCMLLDDYWERMNLKVPIYF 266

Query: 1346 SAGLTIQANMYYKMFIGWASQKIKDTSSVRNTYDFKHVCPLDRSLVNAPGPCVLFATPGM 1167
            SAGLTIQANMYYK+ I WASQK+K+ S+ RN +DFK+V   +RS++NAPGPCVLFATPGM
Sbjct: 267  SAGLTIQANMYYKVLINWASQKVKNLSATRNAFDFKNVHSFERSMINAPGPCVLFATPGM 326

Query: 1166 ISGGFSLEVFKQWAPSELNLVTLPGYCVAGTIGHKLMSGK-PTKVDLDKETQIDVRCQIH 990
            +SGGFSLEVFKQWAP E NL+ LPGYC+A T+GHKLM  K P ++D+DK TQIDVRCQIH
Sbjct: 327  LSGGFSLEVFKQWAPYEQNLIALPGYCLAETVGHKLMRAKPPARIDVDKSTQIDVRCQIH 386

Query: 989  QLSFSPHTDAKGIMDLIGFLSPKHVMLVHGEKPKMASLRERIQSELRIPCCYPANNEIVL 810
            QLSFSPHTD+KGIMDLI FLSPK+V+LVHGEKPKMASL+ERI+S+LRIPC YPANNE   
Sbjct: 387  QLSFSPHTDSKGIMDLIRFLSPKNVILVHGEKPKMASLKERIESDLRIPCYYPANNESQC 446

Query: 809  IPTTPSVKVGATKMFIRRCST------STLGKTDDKLLI-----SCSTSNEASGARGILV 663
            I +T  +K  A+K F++   +       T+ + D   ++     SC    +   A G ++
Sbjct: 447  IESTQYIKAEASKSFLQSSLSPNFKFLKTISRADTGFILNERAESCIQVCDDRVAEGAVI 506

Query: 662  MEKTKTAKIIDEDELVHTLGLEEHKVLYALCCPV 561
            M+K +  KI+ ++EL+  L  E HKV  A CCPV
Sbjct: 507  MQKDQHPKIVHQNELMDILEAENHKVQVAYCCPV 540