BLASTX nr result
ID: Zingiber23_contig00014186
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00014186
(779 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g... 135 2e-29
ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g... 134 3e-29
ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g... 134 5e-29
gb|ESW08501.1| hypothetical protein PHAVU_009G051000g [Phaseolus... 132 1e-28
ref|XP_006350524.1| PREDICTED: KH domain-containing protein At4g... 132 2e-28
gb|EOY23588.1| RNA-binding KH domain-containing protein [Theobro... 132 2e-28
ref|XP_004234980.1| PREDICTED: KH domain-containing protein At4g... 130 4e-28
ref|XP_004307961.1| PREDICTED: KH domain-containing protein At4g... 130 5e-28
emb|CBI23026.3| unnamed protein product [Vitis vinifera] 130 7e-28
ref|XP_002321989.1| hypothetical protein POPTR_0015s01350g [Popu... 128 2e-27
gb|EMJ20144.1| hypothetical protein PRUPE_ppa002491mg [Prunus pe... 128 2e-27
ref|XP_004502677.1| PREDICTED: KH domain-containing protein At4g... 127 3e-27
ref|XP_004502676.1| PREDICTED: KH domain-containing protein At4g... 127 3e-27
dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana] 127 3e-27
ref|NP_001190526.1| RNA-binding KH domain-containing protein [Ar... 127 3e-27
ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabi... 127 3e-27
gb|EPS68840.1| hypothetical protein M569_05927, partial [Genlise... 127 6e-27
ref|XP_006279485.1| hypothetical protein CARUB_v10026043mg [Caps... 127 6e-27
ref|XP_006401750.1| hypothetical protein EUTSA_v10012933mg [Eutr... 126 7e-27
ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g... 126 7e-27
>ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 644
Score = 135 bits (340), Expect = 2e-29
Identities = 66/106 (62%), Positives = 82/106 (77%)
Frame = -1
Query: 374 QDGPHSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERIIE 195
QD P TVTT +RILC D KAGGVIGK GSIIK+ RQ TGAWINVH+L+PGD+ERIIE
Sbjct: 53 QDSP---LTVTTSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIE 109
Query: 194 TLDDRRKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDGNEDEAY 57
D RR++ +GR P +SPA++AL +IHERI++++ FG EDE Y
Sbjct: 110 ISDTRRRDPEGRMPSFSPAQEALLLIHERILESDAAFGVAEEDEEY 155
>ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 647
Score = 134 bits (337), Expect = 3e-29
Identities = 65/106 (61%), Positives = 82/106 (77%)
Frame = -1
Query: 374 QDGPHSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERIIE 195
QD P TVTT +RILC D KAGGVIGK GSIIK+ RQ TGAWINVH+L+PGD+ERIIE
Sbjct: 53 QDSP---LTVTTSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIE 109
Query: 194 TLDDRRKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDGNEDEAY 57
D RR++ +GR P +SPA++AL +IHERI++++ FG +DE Y
Sbjct: 110 ISDTRRRDPEGRMPSFSPAQEALLLIHERILESDAAFGVAEDDEEY 155
>ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 661
Score = 134 bits (336), Expect = 5e-29
Identities = 65/102 (63%), Positives = 83/102 (81%)
Frame = -1
Query: 380 KLQDGPHSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERI 201
KLQD S+ VTT +RILC D KAGGVIGK GSIIK+ RQ TGAWINVH+L+PGD+ERI
Sbjct: 57 KLQD---SSVMVTTSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERI 113
Query: 200 IETLDDRRKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDG 75
IE D RR++ +GR PQ+SPA++AL MIH+RI++++ FG+G
Sbjct: 114 IEISDTRRRDPEGRMPQFSPAQEALFMIHDRILESDAGFGNG 155
>gb|ESW08501.1| hypothetical protein PHAVU_009G051000g [Phaseolus vulgaris]
Length = 644
Score = 132 bits (333), Expect = 1e-28
Identities = 66/108 (61%), Positives = 83/108 (76%)
Frame = -1
Query: 380 KLQDGPHSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERI 201
K QD S +VTT +RILC D KAGGVIGK GSIIK+ RQ TGAWINVH+L+PGD+ERI
Sbjct: 50 KAQD---SQLSVTTSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERI 106
Query: 200 IETLDDRRKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDGNEDEAY 57
IE D RR++ +GR P +SPA++AL +IHERI++++ FG EDE Y
Sbjct: 107 IEISDTRRRDPEGRMPSFSPAQEALLLIHERILESDAAFGVVEEDEEY 154
>ref|XP_006350524.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
tuberosum]
Length = 669
Score = 132 bits (331), Expect = 2e-28
Identities = 66/102 (64%), Positives = 79/102 (77%)
Frame = -1
Query: 380 KLQDGPHSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERI 201
K+QD A VTT +RILC D KAGGVIGK GSIIKA RQ TGAW+NVH+L+PGDDERI
Sbjct: 51 KMQD---PALMVTTTYRILCHDVKAGGVIGKSGSIIKAIRQHTGAWVNVHELIPGDDERI 107
Query: 200 IETLDDRRKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDG 75
IE D RR++ DGR P +SPA++AL MIHERI+D++ G G
Sbjct: 108 IEISDTRRRDPDGRMPVFSPAQEALLMIHERILDSDSGGGGG 149
>gb|EOY23588.1| RNA-binding KH domain-containing protein [Theobroma cacao]
Length = 675
Score = 132 bits (331), Expect = 2e-28
Identities = 64/108 (59%), Positives = 83/108 (76%), Gaps = 4/108 (3%)
Frame = -1
Query: 368 GPHSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERIIETL 189
G S+ VTT +RILC D KAGGVIGK GSIIK+ RQ TGAWINVH+L+PGD+ERIIE
Sbjct: 66 GQDSSLMVTTSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEIS 125
Query: 188 DDRRKELDGRPPQYSPAEDALRMIHERIVDAEFEF----GDGNEDEAY 57
D RR++ +GR P +SPA++AL +IHERI++++ +F G G E+E Y
Sbjct: 126 DTRRRDPEGRMPSFSPAQEALFLIHERILESDSQFGFGSGGGEEEEDY 173
>ref|XP_004234980.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 668
Score = 130 bits (328), Expect = 4e-28
Identities = 64/96 (66%), Positives = 77/96 (80%)
Frame = -1
Query: 380 KLQDGPHSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERI 201
K+QD A VTT +RILC D KAGGVIGK GSIIKA RQ TGAW+NVH+L+PGDDERI
Sbjct: 52 KMQD---PALMVTTTYRILCHDVKAGGVIGKSGSIIKAIRQHTGAWVNVHELIPGDDERI 108
Query: 200 IETLDDRRKELDGRPPQYSPAEDALRMIHERIVDAE 93
IE D RR++ DGR P +SPA++AL MIHERI+D++
Sbjct: 109 IEISDTRRRDPDGRMPAFSPAQEALLMIHERILDSD 144
>ref|XP_004307961.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
vesca subsp. vesca]
Length = 667
Score = 130 bits (327), Expect = 5e-28
Identities = 61/101 (60%), Positives = 80/101 (79%)
Frame = -1
Query: 359 SAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERIIETLDDR 180
++A VTT +RILC D KAGGVIGK GSIIK+ RQ TGAWINVH+LVPGD+ERIIE D R
Sbjct: 71 ASAAVTTSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTR 130
Query: 179 RKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDGNEDEAY 57
R++ +GR P +SPA++AL ++HERI+++E G E++ Y
Sbjct: 131 RRDPEGRMPAFSPAQEALFLVHERILESEVGGGGAEEEDEY 171
>emb|CBI23026.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 130 bits (326), Expect = 7e-28
Identities = 60/91 (65%), Positives = 77/91 (84%)
Frame = -1
Query: 347 VTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERIIETLDDRRKEL 168
VTT +RILC D KAGGVIGK GSIIK+ RQ TGAWINVH+L+PGD+ERIIE D RR++
Sbjct: 2 VTTSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDP 61
Query: 167 DGRPPQYSPAEDALRMIHERIVDAEFEFGDG 75
+GR PQ+SPA++AL MIH+RI++++ FG+G
Sbjct: 62 EGRMPQFSPAQEALFMIHDRILESDAGFGNG 92
>ref|XP_002321989.1| hypothetical protein POPTR_0015s01350g [Populus trichocarpa]
gi|222868985|gb|EEF06116.1| hypothetical protein
POPTR_0015s01350g [Populus trichocarpa]
Length = 685
Score = 128 bits (322), Expect = 2e-27
Identities = 59/98 (60%), Positives = 77/98 (78%)
Frame = -1
Query: 374 QDGPHSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERIIE 195
Q P S VTT +RILC D KAGGVIGK GSIIK+ RQ TGAWINVH+L+PGD+ERIIE
Sbjct: 75 QQDPSSTLMVTTSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIE 134
Query: 194 TLDDRRKELDGRPPQYSPAEDALRMIHERIVDAEFEFG 81
D RR++ +GR P +SPA++AL +IH+RI++ + ++G
Sbjct: 135 ISDTRRRDPEGRMPSFSPAQEALFLIHDRILENDLQYG 172
>gb|EMJ20144.1| hypothetical protein PRUPE_ppa002491mg [Prunus persica]
Length = 667
Score = 128 bits (321), Expect = 2e-27
Identities = 60/98 (61%), Positives = 78/98 (79%)
Frame = -1
Query: 350 TVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERIIETLDDRRKE 171
TVTT +RILC D KAGGVIGK GSIIK+ RQ TGAWINVH+L+PGD+ERIIE D RR++
Sbjct: 64 TVTTTYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRD 123
Query: 170 LDGRPPQYSPAEDALRMIHERIVDAEFEFGDGNEDEAY 57
+GR P +SPA++AL +IHERI++++ G E++ Y
Sbjct: 124 PEGRMPAFSPAQEALFLIHERILESDVAGFGGEEEDEY 161
>ref|XP_004502677.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X2
[Cicer arietinum]
Length = 648
Score = 127 bits (320), Expect = 3e-27
Identities = 64/105 (60%), Positives = 81/105 (77%)
Frame = -1
Query: 380 KLQDGPHSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERI 201
K QD S+ TVTT +RILC D KAGGVIGK GSIIK+ RQ TGAWINVH+L+ GD+ERI
Sbjct: 51 KTQD---SSLTVTTSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELIAGDEERI 107
Query: 200 IETLDDRRKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDGNED 66
IE D RR++ +GR P +SPA++AL +IHERI+++E FG E+
Sbjct: 108 IEISDTRRRDPEGRMPSFSPAQEALLLIHERILESEPMFGVDEEE 152
>ref|XP_004502676.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Cicer arietinum]
Length = 676
Score = 127 bits (320), Expect = 3e-27
Identities = 64/105 (60%), Positives = 81/105 (77%)
Frame = -1
Query: 380 KLQDGPHSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERI 201
K QD S+ TVTT +RILC D KAGGVIGK GSIIK+ RQ TGAWINVH+L+ GD+ERI
Sbjct: 51 KTQD---SSLTVTTSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELIAGDEERI 107
Query: 200 IETLDDRRKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDGNED 66
IE D RR++ +GR P +SPA++AL +IHERI+++E FG E+
Sbjct: 108 IEISDTRRRDPEGRMPSFSPAQEALLLIHERILESEPMFGVDEEE 152
>dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 660
Score = 127 bits (320), Expect = 3e-27
Identities = 62/106 (58%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Frame = -1
Query: 362 HSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERIIETLDD 183
H TT +RILC D KAGGVIGK G+IIK+ RQ TGAWINVH+LVPGD ERIIE D+
Sbjct: 61 HPETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDN 120
Query: 182 RRKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDG----NEDEAY 57
RR++ DGR P +SPA++AL +H+RI+++E +FG G E+E Y
Sbjct: 121 RRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDY 166
>ref|NP_001190526.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332008916|gb|AED96299.1| RNA-binding KH
domain-containing protein [Arabidopsis thaliana]
Length = 198
Score = 127 bits (320), Expect = 3e-27
Identities = 62/106 (58%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Frame = -1
Query: 362 HSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERIIETLDD 183
H TT +RILC D KAGGVIGK G+IIK+ RQ TGAWINVH+LVPGD ERIIE D+
Sbjct: 61 HPETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDN 120
Query: 182 RRKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDG----NEDEAY 57
RR++ DGR P +SPA++AL +H+RI+++E +FG G E+E Y
Sbjct: 121 RRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDY 166
>ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|17065220|gb|AAL32764.1| RNA-binding protein-like
[Arabidopsis thaliana] gi|30725478|gb|AAP37761.1|
At5g53060 [Arabidopsis thaliana]
gi|332008915|gb|AED96298.1| RNA-binding KH
domain-containing protein [Arabidopsis thaliana]
Length = 652
Score = 127 bits (320), Expect = 3e-27
Identities = 62/106 (58%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Frame = -1
Query: 362 HSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERIIETLDD 183
H TT +RILC D KAGGVIGK G+IIK+ RQ TGAWINVH+LVPGD ERIIE D+
Sbjct: 61 HPETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDN 120
Query: 182 RRKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDG----NEDEAY 57
RR++ DGR P +SPA++AL +H+RI+++E +FG G E+E Y
Sbjct: 121 RRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDY 166
>gb|EPS68840.1| hypothetical protein M569_05927, partial [Genlisea aurea]
Length = 541
Score = 127 bits (318), Expect = 6e-27
Identities = 63/100 (63%), Positives = 74/100 (74%)
Frame = -1
Query: 362 HSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERIIETLDD 183
H + VTT +RILC D KAGGVIGK GSIIK+ RQ TGAWINVH+L GD+ERIIE D
Sbjct: 67 HDSVMVTTSYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAAGDEERIIEISDT 126
Query: 182 RRKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDGNEDE 63
RRK+ DGR +SPA++AL +IHERI+D GDG DE
Sbjct: 127 RRKDPDGRMHSFSPAQEALLLIHERILD-NLGIGDGENDE 165
>ref|XP_006279485.1| hypothetical protein CARUB_v10026043mg [Capsella rubella]
gi|482548189|gb|EOA12383.1| hypothetical protein
CARUB_v10026043mg [Capsella rubella]
Length = 659
Score = 127 bits (318), Expect = 6e-27
Identities = 62/106 (58%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Frame = -1
Query: 362 HSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERIIETLDD 183
H TT +RILC D KAGGVIGK G+IIK+ RQ TGAWINVH+LVPGD ERIIE D+
Sbjct: 65 HPETMATTAYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDN 124
Query: 182 RRKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDG----NEDEAY 57
RR++ DGR P +SPA++AL +H+RI+++E +FG G E+E Y
Sbjct: 125 RRRDPDGRMPSFSPAQEALFSVHDRILESEPQFGYGGAQPEEEEDY 170
>ref|XP_006401750.1| hypothetical protein EUTSA_v10012933mg [Eutrema salsugineum]
gi|557102840|gb|ESQ43203.1| hypothetical protein
EUTSA_v10012933mg [Eutrema salsugineum]
Length = 647
Score = 126 bits (317), Expect = 7e-27
Identities = 61/107 (57%), Positives = 79/107 (73%), Gaps = 5/107 (4%)
Frame = -1
Query: 362 HSAATVTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERIIETLDD 183
H TT +R+LC D KAGGVIGK G+IIK+ RQ TGAWINVH+LVPGD ERIIE D+
Sbjct: 60 HPETMATTTYRVLCLDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDN 119
Query: 182 RRKELDGRPPQYSPAEDALRMIHERIVDAEFEFGDG-----NEDEAY 57
RR++ DGR P +SPA++AL +H+RI+++E +FG G E+E Y
Sbjct: 120 RRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGVAPPPEEEEDY 166
>ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus] gi|449517605|ref|XP_004165836.1| PREDICTED: KH
domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 666
Score = 126 bits (317), Expect = 7e-27
Identities = 63/100 (63%), Positives = 77/100 (77%), Gaps = 5/100 (5%)
Frame = -1
Query: 347 VTTFFRILCPDTKAGGVIGKYGSIIKAFRQETGAWINVHQLVPGDDERIIETLDDRRKEL 168
VTT +RILC D KAGGVIGK GSIIK+ RQ TGAWINVH+LVPGD+ERIIE D RR++
Sbjct: 58 VTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDP 117
Query: 167 DGRPPQYSPAEDALRMIHERIVDAEFE-----FGDGNEDE 63
+GR P +SPA++AL +IHERI+++E G G EDE
Sbjct: 118 EGRMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDE 157