BLASTX nr result

ID: Zingiber23_contig00014124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00014124
         (316 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452397.1| hypothetical protein SORBIDRAFT_04g025040 [S...    56   4e-06

>ref|XP_002452397.1| hypothetical protein SORBIDRAFT_04g025040 [Sorghum bicolor]
           gi|241932228|gb|EES05373.1| hypothetical protein
           SORBIDRAFT_04g025040 [Sorghum bicolor]
          Length = 1756

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/78 (44%), Positives = 49/78 (62%)
 Frame = -1

Query: 271 VLVDLPGQTDQDSRSMRGDPDTGILVNIDGSMQESVDESGREETFEDASDILSRTESSRS 92
           VLV+LP Q   ++RS   DPD G+LVN+        D++   ETFEDA D L+ + S  +
Sbjct: 44  VLVELPAQ---EARSPGADPDGGVLVNMPA------DDATSGETFEDAPDDLAASGSRSA 94

Query: 91  LALEESMAVIEFGERSDS 38
            +L+ESMAVI+F E S +
Sbjct: 95  RSLDESMAVIDFPEVSST 112


Top