BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00014062
         (957 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...   458   e-126
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr...   458   e-126
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   452   e-125
gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma ca...   451   e-124
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...   449   e-124
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub...   444   e-122
tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m...   443   e-122
tpg|DAA49469.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m...   443   e-122
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...   441   e-121
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   441   e-121
gb|EEE51207.1| hypothetical protein OsJ_32024 [Oryza sativa Japo...   441   e-121
gb|ABB47823.2| DNA-directed RNA polymerase, beta subunit family ...   441   e-121
gb|AAM92814.1| putative DNA-directed RNA polymerase I subunit, 5...   441   e-121
ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I sub...   440   e-121
ref|XP_006661904.1| PREDICTED: probable DNA-directed RNA polymer...   439   e-121
ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymer...   439   e-121
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...   439   e-121
gb|EEC67242.1| hypothetical protein OsI_34174 [Oryza sativa Indi...   439   e-121
ref|XP_002297732.2| DNA-directed RNA polymerase family protein [...   438   e-120
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub...   437   e-120

>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score =  458 bits (1179), Expect = e-126
 Identities = 227/314 (72%), Positives = 246/314 (78%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E   +DYV+VD   SKN  QK NIR R TR PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 861  ESVFVDYVAVDMKNSKNLPQKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 920

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
             VTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSLHGKF+DATPF  S           
Sbjct: 921  GVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTD 980

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LG ML   GFNYHGVEV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR
Sbjct: 981  ESKSLVDELGEMLRTCGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 1040

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            STGT+DQITRQP             EMERD++LAHGAAYLLHDRLH+CSDYH+ADVCS C
Sbjct: 1041 STGTMDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLC 1100

Query: 721  GSVLSATIIQPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTA 900
            GSVL+AT I PQK++ REI GLPPAR PK   C AC+TSKGMETVAMPYVF+YLAAE  A
Sbjct: 1101 GSVLTATFIHPQKRAIREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAA 1160

Query: 901  MNIKMDLQLRSQAS 942
            MNIK+ LQL   A+
Sbjct: 1161 MNIKITLQLGDGAT 1174


>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
            gi|557530116|gb|ESR41366.1| hypothetical protein
            CICLE_v10024768mg [Citrus clementina]
          Length = 1082

 Score =  458 bits (1179), Expect = e-126
 Identities = 227/314 (72%), Positives = 246/314 (78%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E   +DYV+VD   SKN  QK NIR R TR PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 768  ESVFVDYVAVDMKNSKNLPQKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 827

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
             VTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSLHGKF+DATPF  S           
Sbjct: 828  GVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTD 887

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LG ML   GFNYHGVEV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR
Sbjct: 888  ESKSLVDELGEMLRTCGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 947

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            STGT+DQITRQP             EMERD++LAHGAAYLLHDRLH+CSDYH+ADVCS C
Sbjct: 948  STGTMDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLC 1007

Query: 721  GSVLSATIIQPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTA 900
            GSVL+AT I PQK++ REI GLPPAR PK   C AC+TSKGMETVAMPYVF+YLAAE  A
Sbjct: 1008 GSVLTATFIHPQKRAIREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAA 1067

Query: 901  MNIKMDLQLRSQAS 942
            MNIK+ LQL   A+
Sbjct: 1068 MNIKITLQLGDGAT 1081


>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score =  452 bits (1164), Expect = e-125
 Identities = 224/313 (71%), Positives = 250/313 (79%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E  I+DYV++D   +K + QKVNIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 830  EPVIVDYVALDAK-NKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 888

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
             VTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSLHGKFVDATPF  S           
Sbjct: 889  GVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDS-LRKANGEAGS 947

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LG MLT+YGFNYHGVEV++SG YGTELTCEIFIGPVYYQRLRHMVSDKFQVR
Sbjct: 948  ESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 1007

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            STGTVDQ+TRQP             EMERD++LAHGAAYLLHDRLH+CSD+HIADVCS C
Sbjct: 1008 STGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLC 1067

Query: 721  GSVLSATIIQPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTA 900
            GS+L+ +IIQPQK++ REI GLPP R PK   C AC+TSKGMETV+MPY+F++LAAE  A
Sbjct: 1068 GSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSMPYIFRFLAAELAA 1127

Query: 901  MNIKMDLQLRSQA 939
            MNIKM LQL + A
Sbjct: 1128 MNIKMTLQLSNGA 1140


>gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
          Length = 1180

 Score =  451 bits (1159), Expect = e-124
 Identities = 226/313 (72%), Positives = 246/313 (78%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E  I+DYV+VD T SK +LQK NIR R  R P+IGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 868  ETVIVDYVAVD-TKSKKHLQKANIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFS 926

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
             VTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSLHGKFVDATPF  S           
Sbjct: 927  GVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDS-VKEAKGKTEA 985

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LG ML A GFNYHGVEV++SGVYGTELTCEIFIGPVYYQRLRHMVSDK+QVR
Sbjct: 986  ESESLVDELGSMLRARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVR 1045

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            +TG VDQITRQP             EMERDA+LAHGAAYLLHDRLH+CSDYHIADVCS C
Sbjct: 1046 ATGQVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHIADVCSLC 1105

Query: 721  GSVLSATIIQPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTA 900
            GS+L+ +I+QP K+  REI GLPPAR PK   C AC+TSKGMETVAMPYVF+YLAAE  A
Sbjct: 1106 GSILTTSIVQPPKRVVREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAA 1165

Query: 901  MNIKMDLQLRSQA 939
            MNI M +QL S A
Sbjct: 1166 MNITMTIQLNSGA 1178


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score =  449 bits (1155), Expect = e-124
 Identities = 223/313 (71%), Positives = 248/313 (79%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            +  I+DYV++D T +K +LQKVNIR R  R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 846  DPVIVDYVAID-TKNKKHLQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 904

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
             VTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+GKFVDATPF  S  N        
Sbjct: 905  GVTGMRPDLIINPHAFPSRMTIAMLLESLAAKGGSLNGKFVDATPFTSSVKNVNGGEAKS 964

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LG ML ++GFNYHGVEV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR
Sbjct: 965  ESESLVDDLGNMLRSHGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 1024

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            STGTVDQITRQP             EMERDA+LAHGAAYLLHDRLH+CSDYHIADVCS C
Sbjct: 1025 STGTVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHIADVCSLC 1084

Query: 721  GSVLSATIIQPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTA 900
            GS+L+ + IQ QK+  R+I GLPP   PK   C +C+TSKGMETVAMPYVF+YLAAE  A
Sbjct: 1085 GSILTTSFIQTQKRVVRDIGGLPPVGAPKKVACHSCQTSKGMETVAMPYVFRYLAAELAA 1144

Query: 901  MNIKMDLQLRSQA 939
            MNIKM++QL   A
Sbjct: 1145 MNIKMNVQLSGGA 1157


>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1169

 Score =  444 bits (1142), Expect = e-122
 Identities = 221/309 (71%), Positives = 242/309 (78%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E AI+DYV++DG   K +LQKVNIR R  R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 859  EPAIVDYVAIDG---KKHLQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 915

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
             VTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSLHGKFVDATPF  S           
Sbjct: 916  GVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFANSEKKVNEETNGE 975

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LG ML   GFNY+G EV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR
Sbjct: 976  KSKTLVDELGEMLKVKGFNYYGAEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 1035

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            STG VDQ+TRQP             EMERD++LAHGAAYLLHDRLH+CSDYHIADVCS C
Sbjct: 1036 STGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLC 1095

Query: 721  GSVLSATIIQPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTA 900
            GS+L+ + +QPQ    REI G+PP R PK   C ACKTSKGMETVAMPYVF+YLAAE  A
Sbjct: 1096 GSILTTSSVQPQ-VPVREIPGMPPMRAPKKVTCHACKTSKGMETVAMPYVFRYLAAELAA 1154

Query: 901  MNIKMDLQL 927
            MNIK++LQL
Sbjct: 1155 MNIKLNLQL 1163


>tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
          Length = 1162

 Score =  443 bits (1140), Expect = e-122
 Identities = 221/315 (70%), Positives = 251/315 (79%), Gaps = 2/315 (0%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E A IDYV+V+GTGSK  LQK NIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 846  EPAFIDYVAVNGTGSKCGLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 905

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
            A TGMRPDLIINPHAFPSRMTI MLLES+AAK GSLHGKF+DATPF  S           
Sbjct: 906  ANTGMRPDLIINPHAFPSRMTIAMLLESMAAKAGSLHGKFIDATPFANS---LKKDKDSD 962

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LGPML +YGFNYHG EV++SGV+GTE+ CEIFIGPVYYQRLRHMVSDKFQVR
Sbjct: 963  KPNSIVDELGPMLASYGFNYHGNEVLYSGVFGTEMDCEIFIGPVYYQRLRHMVSDKFQVR 1022

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            +TG +DQITRQP             EMERDA+LAHG++YLLHDRLHSCSDYHIADVCS+C
Sbjct: 1023 TTGRIDQITRQPIGGRKHGGGIRFGEMERDALLAHGSSYLLHDRLHSCSDYHIADVCSFC 1082

Query: 721  GSVLSATIIQ--PQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEF 894
            GS+L+AT+I+   QKK   E+ GLP  R  K++ CQACKTSKGMETVAMPYVF+YLAAE 
Sbjct: 1083 GSLLTATMIKSDTQKKVKHEMLGLPTVRPAKNFACQACKTSKGMETVAMPYVFRYLAAEL 1142

Query: 895  TAMNIKMDLQLRSQA 939
             AMNIK++L+L +++
Sbjct: 1143 AAMNIKLELRLSNKS 1157


>tpg|DAA49469.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
          Length = 1128

 Score =  443 bits (1140), Expect = e-122
 Identities = 221/315 (70%), Positives = 251/315 (79%), Gaps = 2/315 (0%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E A IDYV+V+GTGSK  LQK NIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 812  EPAFIDYVAVNGTGSKCGLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 871

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
            A TGMRPDLIINPHAFPSRMTI MLLES+AAK GSLHGKF+DATPF  S           
Sbjct: 872  ANTGMRPDLIINPHAFPSRMTIAMLLESMAAKAGSLHGKFIDATPFANS---LKKDKDSD 928

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LGPML +YGFNYHG EV++SGV+GTE+ CEIFIGPVYYQRLRHMVSDKFQVR
Sbjct: 929  KPNSIVDELGPMLASYGFNYHGNEVLYSGVFGTEMDCEIFIGPVYYQRLRHMVSDKFQVR 988

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            +TG +DQITRQP             EMERDA+LAHG++YLLHDRLHSCSDYHIADVCS+C
Sbjct: 989  TTGRIDQITRQPIGGRKHGGGIRFGEMERDALLAHGSSYLLHDRLHSCSDYHIADVCSFC 1048

Query: 721  GSVLSATIIQ--PQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEF 894
            GS+L+AT+I+   QKK   E+ GLP  R  K++ CQACKTSKGMETVAMPYVF+YLAAE 
Sbjct: 1049 GSLLTATMIKSDTQKKVKHEMLGLPTVRPAKNFACQACKTSKGMETVAMPYVFRYLAAEL 1108

Query: 895  TAMNIKMDLQLRSQA 939
             AMNIK++L+L +++
Sbjct: 1109 AAMNIKLELRLSNKS 1123


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
            [Glycine max]
          Length = 1151

 Score =  441 bits (1134), Expect = e-121
 Identities = 220/313 (70%), Positives = 243/313 (77%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E   +DYV+ D   +K +LQKVNIR R  R P+IGDKFSSRHGQKGVCSQLWPDVDMPFS
Sbjct: 837  EAVYVDYVAAD-VKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFS 895

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
              TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF RS+          
Sbjct: 896  GTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPF-RSSVTKDSGESDS 954

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LG +L   GFNYHG+EV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR
Sbjct: 955  KSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 1014

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            STGT+DQ+TRQP             EMERD++LAHGAAYLLHDRLH+CSDYHIADVCS C
Sbjct: 1015 STGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLC 1074

Query: 721  GSVLSATIIQPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTA 900
            GS+L+ T IQPQK+  REI GLPP R PK   C AC+TSKGMETVAMPYVF+YLAAE  A
Sbjct: 1075 GSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAA 1134

Query: 901  MNIKMDLQLRSQA 939
            MNIKM L+L   A
Sbjct: 1135 MNIKMTLKLSDGA 1147


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score =  441 bits (1134), Expect = e-121
 Identities = 220/313 (70%), Positives = 243/313 (77%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E   +DYV+ D   +K +LQKVNIR R  R P+IGDKFSSRHGQKGVCSQLWPDVDMPFS
Sbjct: 861  EAVYVDYVAAD-VKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFS 919

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
              TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF RS+          
Sbjct: 920  GTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPF-RSSVTKDSGESDS 978

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LG +L   GFNYHG+EV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR
Sbjct: 979  KSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 1038

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            STGT+DQ+TRQP             EMERD++LAHGAAYLLHDRLH+CSDYHIADVCS C
Sbjct: 1039 STGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLC 1098

Query: 721  GSVLSATIIQPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTA 900
            GS+L+ T IQPQK+  REI GLPP R PK   C AC+TSKGMETVAMPYVF+YLAAE  A
Sbjct: 1099 GSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAA 1158

Query: 901  MNIKMDLQLRSQA 939
            MNIKM L+L   A
Sbjct: 1159 MNIKMTLKLSDGA 1171


>gb|EEE51207.1| hypothetical protein OsJ_32024 [Oryza sativa Japonica Group]
          Length = 1150

 Score =  441 bits (1133), Expect = e-121
 Identities = 217/314 (69%), Positives = 250/314 (79%), Gaps = 2/314 (0%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E A IDYV+V+GT  K+ LQK NIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 834  EPAAIDYVAVNGTNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 893

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
            A TGMRPDLIINPHAFPSRMTI MLLESIAAK GSL GKF+DATPF  S           
Sbjct: 894  ANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASS--------VKE 945

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LGPML +YGFNYHG E+++SGV+GTE+ CEIF+GPVYYQRLRHMVSDKFQVR
Sbjct: 946  RSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVR 1005

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            +TG +DQITRQP             EMERDA+LAHGA+YLLHDRLHSCSDYHIADVCS C
Sbjct: 1006 TTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSIC 1065

Query: 721  GSVLSATII--QPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEF 894
            GS+L+AT+I  + QKK+ R++ GLP  + PK++ CQACKTSKGMETVAMPYVF+YLA+E 
Sbjct: 1066 GSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASEL 1125

Query: 895  TAMNIKMDLQLRSQ 936
             AMNIK++L+L ++
Sbjct: 1126 AAMNIKLELRLSNR 1139


>gb|ABB47823.2| DNA-directed RNA polymerase, beta subunit family protein, expressed
            [Oryza sativa Japonica Group]
          Length = 1044

 Score =  441 bits (1133), Expect = e-121
 Identities = 217/314 (69%), Positives = 250/314 (79%), Gaps = 2/314 (0%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E A IDYV+V+GT  K+ LQK NIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 728  EPAAIDYVAVNGTNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 787

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
            A TGMRPDLIINPHAFPSRMTI MLLESIAAK GSL GKF+DATPF  S           
Sbjct: 788  ANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASS--------VKE 839

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LGPML +YGFNYHG E+++SGV+GTE+ CEIF+GPVYYQRLRHMVSDKFQVR
Sbjct: 840  RSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVR 899

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            +TG +DQITRQP             EMERDA+LAHGA+YLLHDRLHSCSDYHIADVCS C
Sbjct: 900  TTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSIC 959

Query: 721  GSVLSATII--QPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEF 894
            GS+L+AT+I  + QKK+ R++ GLP  + PK++ CQACKTSKGMETVAMPYVF+YLA+E 
Sbjct: 960  GSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASEL 1019

Query: 895  TAMNIKMDLQLRSQ 936
             AMNIK++L+L ++
Sbjct: 1020 AAMNIKLELRLSNR 1033


>gb|AAM92814.1| putative DNA-directed RNA polymerase I subunit, 5'-partial [Oryza
            sativa Japonica Group]
          Length = 855

 Score =  441 bits (1133), Expect = e-121
 Identities = 217/314 (69%), Positives = 250/314 (79%), Gaps = 2/314 (0%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E A IDYV+V+GT  K+ LQK NIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 539  EPAAIDYVAVNGTNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 598

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
            A TGMRPDLIINPHAFPSRMTI MLLESIAAK GSL GKF+DATPF  S           
Sbjct: 599  ANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASS--------VKE 650

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LGPML +YGFNYHG E+++SGV+GTE+ CEIF+GPVYYQRLRHMVSDKFQVR
Sbjct: 651  RSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVR 710

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            +TG +DQITRQP             EMERDA+LAHGA+YLLHDRLHSCSDYHIADVCS C
Sbjct: 711  TTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSIC 770

Query: 721  GSVLSATII--QPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEF 894
            GS+L+AT+I  + QKK+ R++ GLP  + PK++ CQACKTSKGMETVAMPYVF+YLA+E 
Sbjct: 771  GSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASEL 830

Query: 895  TAMNIKMDLQLRSQ 936
             AMNIK++L+L ++
Sbjct: 831  AAMNIKLELRLSNR 844


>ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Brachypodium
            distachyon]
          Length = 1181

 Score =  440 bits (1132), Expect = e-121
 Identities = 219/314 (69%), Positives = 249/314 (79%), Gaps = 2/314 (0%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E A IDYV+V+GT SK  LQKVNIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 863  EPAAIDYVAVNGTNSKGSLQKVNIRLRRKRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 922

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
            A TGMRPDLIINPHAFPSRMTI MLLESIAAK GSLHG FVDATPF  S           
Sbjct: 923  ANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLHGNFVDATPFASSV--KEGDGNPW 980

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    +GPML +YGFNYHGVEV++SG++GTELTCEIFIGPVYYQRLRHMVSDKFQVR
Sbjct: 981  KPKSIVDEMGPMLASYGFNYHGVEVLYSGLFGTELTCEIFIGPVYYQRLRHMVSDKFQVR 1040

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            +TG +DQ+TRQP             EMERDA+LAHGA+YLLHDRLHSCSDYHIADVCS C
Sbjct: 1041 TTGRIDQVTRQPIGGRKHGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSLC 1100

Query: 721  GSVLSATII--QPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEF 894
            GS+L+AT+I  + Q KS R + G+   + PK+  CQAC+T+KGMETVAMPYVF+YLAAE 
Sbjct: 1101 GSLLTATVIKSETQMKSKRNMLGVQTVKPPKNLACQACQTNKGMETVAMPYVFRYLAAEL 1160

Query: 895  TAMNIKMDLQLRSQ 936
             AMN+K+DL+L ++
Sbjct: 1161 AAMNVKLDLRLSNR 1174


>ref|XP_006661904.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Oryza brachyantha]
          Length = 1057

 Score =  439 bits (1130), Expect = e-121
 Identities = 218/314 (69%), Positives = 250/314 (79%), Gaps = 2/314 (0%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E A IDYV+V+GT  KN LQK N+R RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 737  EPAAIDYVAVNGTNFKNRLQKANVRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 796

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
            A TGMRPDLIINPHAFPSRMTI MLLESIAAK GSL GKF+DATPF  S+          
Sbjct: 797  ANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLTGKFMDATPF--SSSVEKRDENSC 854

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LGPML +YGFNYHG EV++SGV+GTE+ CEIF+GPVYYQRLRHMVSDKFQVR
Sbjct: 855  TSNSIVDELGPMLASYGFNYHGTEVLYSGVFGTEMNCEIFLGPVYYQRLRHMVSDKFQVR 914

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            +TG +DQITRQP             EMERDAVLAHGA+YLLHDRLHSCSDYHIADVCS C
Sbjct: 915  TTGRIDQITRQPVGGRKFGGGIRFGEMERDAVLAHGASYLLHDRLHSCSDYHIADVCSLC 974

Query: 721  GSVLSATII--QPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEF 894
            GS+L+AT+I  + QKK+ +++ GLP  R  K++ CQACKT+KGMETVAMPYVF+YLAAE 
Sbjct: 975  GSLLTATVIKSESQKKAKQDMLGLPTVRPAKNFACQACKTTKGMETVAMPYVFRYLAAEL 1034

Query: 895  TAMNIKMDLQLRSQ 936
             AMNIK++L+L ++
Sbjct: 1035 AAMNIKLELRLSNR 1048


>ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X2 [Glycine max]
          Length = 1004

 Score =  439 bits (1130), Expect = e-121
 Identities = 220/313 (70%), Positives = 243/313 (77%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E   +DYV+VD   +K +LQKVNIR R  R P+IGDKFSSRHGQKGVCSQLWPDVDMPFS
Sbjct: 690  EAVYVDYVAVD-VKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFS 748

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
              TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF RS+          
Sbjct: 749  GNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPF-RSSVKKDSGESDS 807

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LG +L   GFNYHG+EV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR
Sbjct: 808  MSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 867

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            STGT+DQ+TRQP             EMERD++LAHGAAYLLHDRLH+CSDYHIADVCS C
Sbjct: 868  STGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLC 927

Query: 721  GSVLSATIIQPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTA 900
            GS+L+ T  QPQK+  REI GLPP R PK   C AC+TSKGMETVAMPYVF+YLAAE  A
Sbjct: 928  GSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAA 987

Query: 901  MNIKMDLQLRSQA 939
            MNIKM L+L   A
Sbjct: 988  MNIKMTLKLSDGA 1000


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max]
          Length = 1175

 Score =  439 bits (1130), Expect = e-121
 Identities = 220/313 (70%), Positives = 243/313 (77%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E   +DYV+VD   +K +LQKVNIR R  R P+IGDKFSSRHGQKGVCSQLWPDVDMPFS
Sbjct: 861  EAVYVDYVAVD-VKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFS 919

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
              TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF RS+          
Sbjct: 920  GNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPF-RSSVKKDSGESDS 978

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LG +L   GFNYHG+EV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR
Sbjct: 979  MSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 1038

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            STGT+DQ+TRQP             EMERD++LAHGAAYLLHDRLH+CSDYHIADVCS C
Sbjct: 1039 STGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLC 1098

Query: 721  GSVLSATIIQPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTA 900
            GS+L+ T  QPQK+  REI GLPP R PK   C AC+TSKGMETVAMPYVF+YLAAE  A
Sbjct: 1099 GSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAA 1158

Query: 901  MNIKMDLQLRSQA 939
            MNIKM L+L   A
Sbjct: 1159 MNIKMTLKLSDGA 1171


>gb|EEC67242.1| hypothetical protein OsI_34174 [Oryza sativa Indica Group]
          Length = 1086

 Score =  439 bits (1130), Expect = e-121
 Identities = 216/314 (68%), Positives = 250/314 (79%), Gaps = 2/314 (0%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E A IDYV+V+GT  K+ LQK NIR RR R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 770  EPAAIDYVAVNGTNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 829

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
            A TGMRPDLIINPHAFPSRMTI MLLESIAAK GSL GKF+DATPF  S           
Sbjct: 830  ANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASS--------VKE 881

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LGPML +YGFNYHG E+++SGV+GTE+ CEIF+GPVYYQRLRHMVSDKFQVR
Sbjct: 882  RSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVR 941

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            +TG +DQITRQP             EMERDA+LAHGA+YLLHDRLHSCSDYHIADVCS C
Sbjct: 942  TTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSIC 1001

Query: 721  GSVLSATII--QPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEF 894
            GS+L+AT+I  + QKK+ R++ GLP  + PK++ CQACKTS+GMETVAMPYVF+YLA+E 
Sbjct: 1002 GSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSRGMETVAMPYVFRYLASEL 1061

Query: 895  TAMNIKMDLQLRSQ 936
             AMNIK++L+L ++
Sbjct: 1062 AAMNIKLELRLSNR 1075


>ref|XP_002297732.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550346693|gb|EEE82537.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1117

 Score =  438 bits (1126), Expect = e-120
 Identities = 221/313 (70%), Positives = 245/313 (78%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E AI+DYV+VD T SK +LQKVNIR R  R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 807  EPAIVDYVAVD-TKSKKHLQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 865

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
             VTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+G FVDATPF  +           
Sbjct: 866  GVTGMRPDLIINPHAFPSRMTIAMLLESLAAKGGSLNGNFVDATPFASTVRASNAGEAKS 925

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LG ML + GFN+HGVEV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR
Sbjct: 926  EPESLVDELGKMLKSKGFNHHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 985

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            STG VDQITRQP             EMERD++LAHGAAYLLHDRLH+CSDYHIADVCS C
Sbjct: 986  STGPVDQITRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDYHIADVCSIC 1045

Query: 721  GSVLSATIIQPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTA 900
            GS+L+ T  QPQ++  R+I GLPP + PK  +C AC+TSKG+ETVAMPYVF+YLAAE  A
Sbjct: 1046 GSILT-THYQPQRRIVRDIGGLPPVKAPKKVVCHACQTSKGIETVAMPYVFRYLAAELAA 1104

Query: 901  MNIKMDLQLRSQA 939
            MNIKM L L   A
Sbjct: 1105 MNIKMTLHLNDGA 1117


>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1171

 Score =  437 bits (1125), Expect = e-120
 Identities = 218/309 (70%), Positives = 240/309 (77%)
 Frame = +1

Query: 1    EDAIIDYVSVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVCSQLWPDVDMPFS 180
            E AI+DYV++DG   K  LQKVNIR R  R PIIGDKFSSRHGQKGVCSQLWPD+DMPFS
Sbjct: 861  EPAIVDYVAIDG---KKQLQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS 917

Query: 181  AVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFPRSNCNXXXXXXXX 360
             VTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSLHGK+VDATPF  S           
Sbjct: 918  GVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKYVDATPFANSEKKVKEETNGE 977

Query: 361  XXXXXXXXLGPMLTAYGFNYHGVEVMHSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 540
                    LG ML   GFNY+G EV++SGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR
Sbjct: 978  KSKTLVDELGEMLKVKGFNYNGAEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVR 1037

Query: 541  STGTVDQITRQPXXXXXXXXXXXXXEMERDAVLAHGAAYLLHDRLHSCSDYHIADVCSYC 720
            STG VDQ+TRQP             EMERD++LAHGAAYLLHDRLH+CSDYHIADVCS C
Sbjct: 1038 STGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLC 1097

Query: 721  GSVLSATIIQPQKKSAREIHGLPPARTPKSYICQACKTSKGMETVAMPYVFKYLAAEFTA 900
            GS+L+ + +QP  +   EI G+PP R PK   C ACKTSKGMETVAMPYVF+YLAAE  A
Sbjct: 1098 GSILTTSSVQPPVRVC-EIPGMPPMRAPKKVTCHACKTSKGMETVAMPYVFRYLAAELAA 1156

Query: 901  MNIKMDLQL 927
            MNIK++LQL
Sbjct: 1157 MNIKLNLQL 1165